mRNA_C-linearis_contig8.15526.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15526.1 vs. uniprot
Match: A0A6H5KNX9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX9_9PHAE) HSP 1 Score: 915 bits (2366), Expect = 2.040e-286 Identity = 996/2456 (40.55%), Postives = 1228/2456 (50.00%), Query Frame = 3
Query: 177 EKERDGEAMEGAREIRKGFMCSICNEFLRDSYNLPCGHTFCLECTNDALADNNACPTCMNPAWQKDILKTALVDSAVQEWVTHCEAKFLAHVARQA---EQGCDDDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRVSAGEGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPRVVGVRRAALWXXXXXXXXXXXDRRKAPRVRFQPSPLCHCGAEADPSHG------EGAFGEGPTAS--SQRNQLPPSAVAVEAKADGVPSSSAGGGTSNARGAAADFEKWT---RERETPEAPRLDEGVDNSSAAASSPGSPALTDLERRGSTPPRRILEKACEDAASTSTPRPSPAAGRKGAAGVRDQEEASGFALALPDTCDIVDADLPAPPLSPIATTNTMLLK----PPAFQVGQAGPAXXXXXXXXXXXRCDVDAANAASCSTG-RVGPVSGGGERNGTVAGVDGGALAGEGVAEGCGKDGRQPRSPQNRGGGELP-----------GNLPNPTSNEDASSSPAAEGKGAAVENFTGVGDPLVCEHEDTDVDARLAN-GEACGDDSS-HPPPA-SCAAGDAGHYGAGCPAEGADGSRSEDEVSDAESVPLLGGDERQQGENGQHXXXXX-QHDPTTSVTPSRAVPS--SRAVSTGGGGAAGCGDGPEETAQPSFGEAAEDE-GEETCDE-----DGGETGAARNSSGRGEQSTPGSDVPAEKRKDLTTGDGDTAATGDELERPDPEGGVGSPSSPSLIPPGLPAEGDAAEREASHSAAVRDAAGTPSATEKQPAVNLARPASPTLAAPPATGEQHEERDSPAAQTSGTEPAAAEPARXXXXXXXXXXXXXXXXXXPRPGSLRGQS-QASTPPSQGVSLQDERQNDKG--AAGLEGDERGGGRGGLRVAETLPQTLGLGGGDVREEGEAKEPGGVDADAAVPETAAESVLLAETRERKAGESFAGDAEAEDDPVVPXTSVQRTTVVEVLEGRGS--KSLVDGVEGLSTCGVRVADGNLARVESQEQGCRSDGGAVAFDEEKTG---MREIGGEDVRVASGGPAQPAD----------SSQRATSSQAALLEQGPGNDRGAPHGQLPKDSSGGEELCRLKLRDPTERRLENGREELRTSLLSREASEASGRVEASREGSRAASALCRATQGSPEQDESGTHEDGHEEKAGRREVPETAAQSITTQQVQTLSTQEVPETARAWGSTGTAECGDSAAQFERTASGVVLAGSSCRQSEVVETQPLRDGATSQSTADDGGGADGDDEAEKGKREQNST----GVTRDSP----------------------SLSSPAPPKEAVVLGTAQSDPGAAREQVGVICLETPDGALASDGSLGAG-AAGLHGAA-DSGENLESAKSPGSGSGSGHQKRSADSATLSPSRTSSV-PGSAGKRLRMTPPPVDGKFRHGRRPGAATSDEGAS------PDGLVGCGSIGARQEAG-GGEQGPPMALRGGSGSGESDNESELPETDHDLAAVQDAWHAEGSYEFGDDGGVYPGDEPEVS---RPPSPP---QPKSRP-----VFNPYAQQAHLDLRADGDDSCAADDAAGATFTKPPPGREASEGHGGPGIAKGATVQGRSSRPALARPSKSTMGFGAPSVG-VARAASSLGNSVLAARLKEKHYHQSSNTILGAGRGHGGAGGTAATKTLVDKTESWSTY-DMGPDTQDVAEVEARLAKKRARAGGNSPHGGVATESSPHDPIDLD---DXXXXXXXXXPAKQGNSRDRGQAGGALGETSAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSTNPRRTVSSDRGAS----RRHRPV-VVLLGCSSREVSRAQQLCEKLGLRKPENELVSGATHVVVGGRHTQAPSSXXXXXGGGYPLNSG----QGRGTK-RHELVAHDLKGYREAVMLGLWVLDFSWVEACWVAEAEAEAEAGDKKRDNDGELP-LAAPPRAFELLGCSRGHEGCEPRRGRYKNGSGVPGAFHGIEFVPVVTETAAAGGRSSSSSPSRLLELEVLRSDTERLVELGGGVLVSTSKKPSRAETGFVDNPF------DSDGE--EMDGXXXXXXXXXXAAKGKRVVVLALPDCLDGHVVSQSLARAATRRRQELGADAAVDRAWVLRSAEKGSPMSFGGYDLRSSSAS-PEXXXXXXXXXAAAPKSRLSMRGLSS---RCEVLLDVENEGGRRIS-PEAVRAQREQTARILQKAEEVVEAPLRQKLPPLDPTGRLGEDGFDFTRRGSKK-APVKANVTTYTAENKAQRDLIDALHKGGYLDLDFSEDEGDMDLDRIDKEKRLGEYWYDYVYDGFFMKRSENAIPEAKRRGCPVDILRAEHESHASIQNDRSRICVKELPGEYSGWKAGRDADDAVELL 7133
EKE D +AME RE RKG +CSICNEFL D+YNLPCGH+FC EC +DALA+ N+CP CMNPAWQKD LK AL DS VQ+WV HCE + AHVA QA + D D+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + A A P VVGV RAA W + PRVRFQPSPL C A ++ G EG+ + AS S R +LPP+A + + S GT A G D T + R TP A L V N+ A AS PG T+ ERR STPPR L A ++ P PSP+ + AA V +E FA+ LPDTCDI DA+ +PP SPIA+ PP + G GP A +A+CS G R G G G +G D +L GE + GKD R G + P G+ P PTS S + +AEG + G G L EH +++ L G++ G + S P PA +A D A E D S SE+EVSDAESVPLLG ++R + NGQ Q + +PS VPS SR+ S G G D P+ET G AA DE GEETCDE + G + AA GRGEQ T G V E+ + T+ + ATG + V SPS +P L G+ +R A+H AA AA S + V+ RPA A P +H++ S +P+AA P + P+P S Q QA T PS+ L DE+ KG A EG GG L VAETLPQT GLGG + + PG D D VPET+ + L+ + E ES AG A DP T VVE GRG ++ EG + V D +A + QE+ S GG + + G ++G ++ R G A A R SSQAA L+Q R +P + G LK + RL +E+ +L S+ +G S S A +C ATQ EQ ES D H + GRR + ETAAQ TTQ+ Q+L+TQEVPETA AWG G G S+++ E AS A + QSEV+ET+ L GAT QSTAD GGG G + G EQ++ G SP S SS P EAVV G ++ + G + G+ E P GA AS GSL A AA +HG D G + + S ++KRSAD ATLSPS S PG+AGKR R+T PP D RP A SD AS PDG GS Q+AG G +QG P+ALRGGSG SD+ESE+PETDHDLAAVQDAW EG +EFGDDGG Y D+ E S R PSP P RP V NPYA QAHL+L DD A A +G P + + RSSR A RPSKSTMGFG+PS G ARA+ SL S AA L + + N IL AGR HG G T A+ ++ DK+ +WS++ D+GPDT++V ++ARLA KRA+ + G A+E++ DP D + + G SR Q ++S+EKXXXXXXXXXXXXXXXXXXXXXX G+ T RR D G RR PV +VLLGCS RE RA +LC +LG +PE ELVSGATHVV+G ++T+ +S G SG GRG RHELV H+++G E V RD G + L +PPR FEL+GCS HEGC+PRRGR G VPG FHG F + A GG +S S ++ RS ERL+ LGGGV+++ S P AE GF DNPF DSD E ++ AAK + VVVLALPD DGH VS SLA+ AT + +ELGA AAVDR W LRS ++GS + F G+DL P AA + + R R EVLLD+E++GGRR + EAVR RE+TAR+L+ AEEV +AP +Q +P DP LG DGF+FTR GSKK A NVTT+ AENKAQRDL +ALHK GYLD + S+ DKE RLGE+W+D VYDGFFMKRSENAIPEAKRRGCPVD+LRAE ESH +IQ DRSR V++LPGE+ WKAG +DDAVELL
Sbjct: 5 EKESDRQAMENVREFRKGLLCSICNEFLSDTYNLPCGHSFCRECIDDALAERNSCPDCMNPAWQKDTLKMALTDSTVQDWVVHCERLYQAHVALQAARDRESSDTDSGLALVEASSGDDERGGIDIGDKEGGGDNVAPIPVPSALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPAA--AEPLPCRSLKVAEKENNAASGSWGAATATSSAGMSVAAAVPAVGVVGVERAAAWSSSPSSFSGG---NRTPRVRFQPSPLRACAAPSEAGQGGPGLQEEGSCLQEEEASVHSLREKLPPAAAVTKPRNS---SPLVLEGTVKA-GDIVDVRLPTEGEKLRSTPAAAPLKRSVANT-AVASPPG----TESERRDSTPPRGTLVVAAKN------PEPSPSVVPEKAAAVEREEAGFSFAVGLPDTCDIFDAES-SPPHSPIASXXXXXXXXXXTPPTLKPG--GPETTAAVSSPSLKARGPRAGASAACSVGARPGVRVGAGGEHGKD---DNASLGGETGSHRHGKDARAMPEESRDGERQSPPQTQGVLDASSGDPPCPTSKPGISGT-SAEGGTSTDVGVDGGGGGLGGEHLGEEIEGTLGGTGKSSGFEGSLRPLPARGASATDVDRSCADVGVELGD-SGSENEVSDAESVPLLGANDRLKDVNGQKLQQQQKQQHGSGRTSPSDGVPSPSSRSPSAGSGV-----DRPDETTVRQRGVAANDEDGEETCDEADSLSNYGGSRAALGDCGRGEQPTTG--VEDERANEATSSE----ATGSSKD-------VDPSFSPSRVPLVLTNGGEVPKRPATHGAAS-GAAEKASPAKGAGVVDSVRPACQAPTASP----RHDKL------LSDEQPSAAVPPKEAESSGTTRVDS------PQPVSRSLQHPQAFTAPSEASVLHDEQSAAKGDVLARREGRSLDGGE--LCVAETLPQTPGLGGDVLGKHAVVASPGD-DGDTTVPETSVQGSLVTDVLEINQPESLAGGVSA--DPA------GGTPVVEQ-PGRGGVGEAFEGDKEGPNVARFEVPDSCVAHADGQEEHHASGGGTASDGLDGRGPVRAEQLGDKNTR----GSAVAAXXXXXXXXGVKGGSRTPSSQAAPLQQ-----RRSPENATTRVVPPG-----LKTGSSADGRLGRDSDEVPETLPSQRVGMDAGDGRGS---SAAGPDVCLATQERSEQRESTRCSDDHGPELGRR-IHETAAQISTTQETQSLTTQEVPETAHAWGGVGACG-GSSSSRIEGVAS---AASGNYSQSEVLETEQLYGGAT-QSTADCGGGV-GANGVGDGVEEQDAARFRGGAIAQSPXXXXXXXXXXXXXXXXXXXXSMSPSSSTLPAEAVVGGRSRDEVGGVKGCAGLGDGEKPGGAWASPGSLRADEAADVHGGVCDGGSPASFVPTERTPDDSRNRKRSADYATLSPSSGLSCDPGNAGKRTRLTLPP-DSAANPSARPREAASDVEASCNDDKPPDG----GSP--WQDAGRGNQQGRPIALRGGSGPPGSDDESEMPETDHDLAAVQDAWLVEGGHEFGDDGG-YLEDQAEESGSGRLPSPAGGDSPPRRPRKNQEVDNPYAPQAHLNLSHGRDDFQPAASA---------------DGMMSPSVGGVEAKKPRSSRTAARRPSKSTMGFGSPSFGGAARASLSLSGSRFAASLNDSNRRPIKNKILAAGREHGPGGTTPASLSVPDKSGTWSSFNDLGPDTEEVENLQARLADKRAQE--KTAAGPAASETNSFDPSDTEYDEGGENDDDDSWAGRGGQSRGHRQGWDTRADSSSEKXXXXXXXXXXXXXXXXXXXXXXSE---GKGTKLRREARHDGGDDGRPRRRRSPVLIVLLGCSPREQKRANELCARLGQHRPETELVSGATHVVIGSQNTRPANSSSDGSSSGNGSRSGAVVDDGRGFGGRHELVKHEVEG-NEGV------------------------------RDRRGGVSSLMSPPRDFELVGCSENHEGCKPRRGRLNRGFKVPGVFHGYAFCVI-----AGGGAGASFST-----VDGSRSGLERLLRLGGGVILA-SVAPRAAE-GFCDNPFGSEDMPDSDDEVVHVEAGSGDGGDNAAAAKERMVVVLALPDSSDGHGVSLSLAKIATDKCRELGAAAAVDRGWALRSLDRGSRLPFDGHDLSDDDVRRPSGQRGGGSSKPAASRLSIPRRRCGDAPPRTEVLLDLEDDGGRRSAMAEAVRTDREKTARLLRIAEEVSKAPTKQ-VPASDPPPGLGADGFEFTRNGSKKKAKGPPNVTTFAAENKAQRDLKEALHKAGYLDANSSDP---------DKEHRLGEFWFDLVYDGFFMKRSENAIPEAKRRGCPVDVLRAEFESHDAIQTDRSRANVEKLPGEFPLWKAGNGSDDAVELL 2280
BLAST of mRNA_C-linearis_contig8.15526.1 vs. uniprot
Match: D7FV25_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV25_ECTSI) HSP 1 Score: 539 bits (1388), Expect = 9.110e-156 Identity = 722/1892 (38.16%), Postives = 876/1892 (46.30%), Query Frame = 3
Query: 177 EKERDGEAMEGAREIRKGFMCSICNEFLRDSYNLPCGHTFCLECTNDALADNNACPTCMNPAWQKDILKTALVDSAVQEWVTHCEAKFLAHVARQAEQGCDDDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRVSAGEGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPRVVGVRRAALWXXXXXXXXXXXDRRKAPRVRFQPSPLCHCGAEADPSH-GEGAFGEGPTASSQRNQLPPSAVAVEAKADGVPSSSAG----GGTSNARGAAADFEKWTRERETPEAPRLDEGVDNSSAAASSPGSPALTDLERRGSTPPRRILEKACEDAASTSTPRPSPAAGRKGAAGVRDQEEASGFALALPDTCDIVDADLPAPPLSPIATTNTMLLK----PPAFQVGQAGPAXXXXXXXXXXXRCDVDAANAASCSTGRVGPVSGGGERNGTVAGVDGGALAGEGVAEGCGKDGRQPRSPQNRGGGELPGNLPNPTSNEDASSSPAAEGKGAAVENFTGVGDPLVCEHEDTDVDARLANGEACGDDSSHPPPASCAAGDAGHYGAGCPAEGADGSRSEDEVSDAESVPLLGGDERQQGENGQHXXXXXQHDPTTSVT-PSRAVPS--SRAVSTGGGGAAGCGDGPEETAQPSFGEAAEDE-GEETCDE-----DGGETGAARNSSGRGEQSTPGSDVPAEKRKDLTTGDGDTAATGDELERPDPEGGVGSPSSPSLIPPGLPAEGDAAEREASHSAAVRDAAGTPSATEKQPAVNLARPASPTLAAPPATGEQHEERDSPAAQTSGTEPAAAEPARXXXXXXXXXXXXXXXXXXPRPGSLRGQSQASTPPSQGVSLQDERQNDKG--AAGLEGDERGGGRGGLRVAETLPQTLGLGGGDVREEGEAKEPGGVDADAAVPETAAESVLLAETRERKAGESFAGDAEAEDDPVVPXTSVQRTTVVEVLEGRG-SKSLVDGVEGLSTCGVRVADGNLARVESQEQGCRSDGGAVA--------FDEEKTGMREIGGEDVRVASGGPAQPA-DSSQRATSSQAALLEQGPGNDRGAPHGQLPKDSSGGEELCRLKLRDPTERRLENGREELRTSLLSREASEASGRVEASREGSRAASALCRATQGSPEQDESGTHEDGHEEKAGRREVPETAAQSITTQQVQTLSTQEVPETARAWGSTGTAECGDSAAQFERTASGVVLAGSSCRQSEVVETQPLRDGATSQSTADDGGGADGDDEAEKGKREQNSTGVTRDSPSLSSPAP--------------------PKEAVVLGTAQSDPGAAREQVGVICLETPDGALASDGSLGAG-AAGLHGAA-DSGENLESAKSPGSGSGSGHQKRSADSATLSPS-RTSSVPGSAGKRLRMTPPPVDGKFRHGRRPGAATSDEGAS------PDGLVGCGSIGARQEAG-GGEQGPPMALRGGSGSGESDNESELPETDHDLAAVQDAWHAEGSYEFGDDGGVYPG--DEPEVSRPPSPP----QPKSRP-----VFNPYAQQAHLDLRADGDDSCAADDAAGATFTKPPPGREASEGHGGPGIAKGATVQGRSSRPALARPSKSTMGFGAPSVGVA-RAASSLGNSVLAARLKEKHYHQSSNTILGAGRGHGGAGGTAATKTLVDKTESWSTY-DMGPDTQDVAEVEARLAKKRARAGGNSPHGGVATESSPHDPIDLDDXXXXXXXXXPAKQGNSRDRGQAGGALGETSAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSTNPRRTVSSDRGAS----RRHRPV-VVLLGCSSREVSRAQQLCEKLGLRKPENELVSGAT 5618
EKE D +AME RE RKG +CSICNEFL D+YNLPCGH+FC EC +DALA+ N+CP CMNPAWQKD LK AL DS VQ+WV +CE + AHVARQA + + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX + A P VVGV RAA W +R PRVRFQPSPL C A ++ G G E + +R +LPP A AV D P G G +AR + EK R TP A L+ V N+ AAAS PG T+ ERR STPPR L +D P PSP+ + A V +E S FA+ LPDTCDI DA+ +PP SPIA+ PP + G GP + AA RVG S +GG GV G GG EL GD+G SED VSDAESVPLLG + R + NGQ + + T PS VPS SR+ G G D P+ET AA DE GEETCDE + G +GAA GRGEQ T G V E+ + + LE P V SSPS +P L G+ +R A+H AA +G T + P AP T ++ P Q S A P GSL+ Q QA T PS+ L DE+ KG A EG GG L VAETLPQT GLGG DV ++ G D D VPET+A+ L + E +S AG A T VE EG G ++ G E + + V D +A + QE+ S GG + E+ G + G V A+ QP R SSQAA L+Q R +P + S G LK + RL + +E+ +L S+ +G S S AA +C ATQ EQ ES D H + GRR +PETAAQ+ TTQ++Q+L+TQEVPETA AWGS G G S+++ + S A S QSEV+ET+ L GAT Q TAD GG G G EQ + R + + S P EAVV GT++ + G + G+ E P A AS GSL A AAG+HG D G + + GSG++KRSAD ATLSPS R S PGSAGKR R+TPPP RPGAA SD AS PDG GS Q+AG G +QG P+ALRGGSG SD+ESE+P+TDHDLAAVQDAWHAEG YEFGDDGG +E E R PS P P +P V NPYA QAHLDL GDD A A G PP G G + RSSR A RPSKSTMGFG+PS G A R + SL S AA L + + N IL AGR HG G T A+ ++ DK+ +WS++ D+GPDT++V ++AR+A+KRA+ + G A E++ DP D + G+ RG+ + + XXXXXXXXXXXXXXXXXXX GR T R DRG RR PV +VLLGCS RE RA +LC +LG R+PE ELVSGAT
Sbjct: 5 EKESDRQAMENVREFRKGLLCSICNEFLSDTYNLPCGHSFCRECIDDALAERNSCPDCMNPAWQKDTLKMALTDSTVQDWVANCERLYQAHVARQAARDGESSDTDSDLALVEASSGDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPENEGVVGXXXXXAPSLPLPAAAEPLPCRSLKGAEKENNAASGSWGAATATSSADLSVAAAAPTAGVVGVERAAAWSSSPSSSFSGQNR--TPRVRFQPSPLRACAAPSEAGQKGSGRQEEEASVHPRREKLPP-AAAVTKPRDSSPLVLEGTVKAGDVVDAR-LPTEGEKL---RSTPAAAPLNRSVANT-AAASPPG----TESERRESTPPRGTLVVTAKD------PGPSPSVVPEKPAAVEREEGGSSFAVGLPDTCDIFDAES-SPPHSPIASXXXXXXXXXXXPPTLKPG--GP--------------ETKAAP-------RVGGTS-----------AEGGTSTDVGVGGGX----------XGLGGVEL---------------------------------------------------------------------GDSG---------------SEDGVSDAESVPLLGANARLKDVNGQKPQQQQKQQHGSGRTWPSDGVPSPSSRSPLAGSGV-----DRPDETTVRHRSTAANDEEGEETCDEADSLSNYGGSGAALGDCGRGEQPTTG--VEDERANEAVS-----------LEATGPSKDVDPSSSPSRVPLVLTNGGEVPKRPATHGAA----SGAAEKTSPAKGTGVVDSVRPGCQAP--TASPRHDKLFPDGQRS---------AAVASKEAELSSTTRVDSPQPVSGSLQRQPQAFTAPSEASVLHDEQSAAKGDVLARREGRSLDGGE--LCVAETLPQTPGLGG-DVLDKHAVVASPGDDGDTTVPETSAQGGLATDVLEPNPPKSLAGGVIA--------GPAGGTPGVEQPEGGGVGEAFEGGKEDPNVARLEVPDSCVAHADGQEEHHASGGGTASDGLDGRGPVRAEQLGDKNTRGSSVAAAALAAPQPGVKGGGRTPSSQAAPLQQ-----RRSPENATTRVDSPG-----LKTGSSADGRLRHDSDEVPETLPSQRVGVDAGDGRGS---SAAAPDVCLATQELSEQRESTRCSDDHGPELGRR-IPETAAQTSTTQEIQSLTTQEVPETAHAWGSVGACG-GSSSSRIDGVGS---AASGSYSQSEVLETEQLHGGAT-QGTADCAGGV-GASGVGDGVEEQGAARFRRGAIAQSQQPXXXXXXXXXXXXXXXXXXXTLPAEAVVGGTSRDEVGGVKSCAGLGDGEKPGEAWASPGSLRADEAAGVHGGVRDGGSPKSLVPTERTPDGSGNRKRSADYATLSPSSRLSCDPGSAGKRTRLTPPPYSAA-NPSARPGAAASDVEASCNDDKPPDG----GSP--WQDAGRGSQQGRPIALRGGSGPPGSDDESEMPDTDHDLAAVQDAWHAEGGYEFGDDGGYLEDQTEETESGRLPSSPAGDDSPPRKPRKNQEVDNPYAPQAHLDLSHGGDDFQPAARADG--MMSPPVGGVEESGK-----------KPRSSRTAARRPSKSTMGFGSPSFGGAVRISPSLSGSRFAASLNDSNRRPIKNRILAAGREHGLGGTTPASLSVPDKSGTWSSFNDLGPDTEEVENLQARVAEKRAQE--KAAAGSAAPETNSFDPSDAE----YEEGGESDDDGSWTGRGEQNHGHRQGWDTRRDSSSXXXXXXXXXXXXXXXXXXXASEGRGTKVPREARHDRGDDGRPRRRRSPVLIVLLGCSPREQKRANELCARLGQRRPETELVSGAT 1659
BLAST of mRNA_C-linearis_contig8.15526.1 vs. uniprot
Match: D7FV26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV26_ECTSI) HSP 1 Score: 365 bits (936), Expect = 4.460e-109 Identity = 224/433 (51.73%), Postives = 273/433 (63.05%), Query Frame = 3
Query: 5883 LAAPPRAFELLGCSRGHEGCEPRRGRYKNGSGVPGAFHGIEFVPVVTETAAAGGRSSSSSPSRLLELEVLRSDTERLVELGGGVLVSTSKKPSRAETGFVDNPF--------DSDGEEMDGXXXXXXXXXXAAKGKRVVVLALPDCLDGHVVSQSLARAATRRRQELGADAAVDRAWVLRSAEKGSPMSFGGYDLRSSSAS-PEXXXXXXXXXAAAPKSRLSMR-----GLSSRCEVLLDVENEGGRRIS-PEAVRAQREQTARILQKAEEVVEAPLRQKLPPLDPTGRLGEDGFDFTRRGSKK-APVKANVTTYTAENKAQRDLIDALHKGGYLDLDFSEDEGDMDLDRIDKEKRLGEYWYDYVYDGFFMKRSENAIPEAKRRGCPVDILRAEHESHASIQNDRSRICVKELPGEYSGWKAGRDADDAVELL 7133
+ +PPR FEL+GCS HEGC+PRRGR G VPG FHG F + G+ + +S SR+ + RS ERL+ LGGGV+++ P RA GF DNPF D + ++ AK + VVVLA+PD DG VS SLA+AAT + +ELGA AAVDR W LRS + GS + F G+DL P AA SRLS+ R EVLLD+E++GGRR + EAVRA RE+TAR+L+ AEEV +AP +Q +P DP G DGF+FTR GSKK A NVTT+ AENKAQRDL +ALHK GYLD D S+ DKE RLGE+W+D VYDGFFMKRSENAIPEAKRRGCPVD+LRAE ESH +IQ DRSR V++LPGE+ WKAG ++DAVELL
Sbjct: 1 MMSPPRDFELVGCSENHEGCKPRRGRLNRGFKVPGVFHGYAFCVIA-------GKGAGASSSRV---DGSRSGLERLLRLGGGVILAPV--PPRAAEGFCDNPFGSEDISGSDDEAVHVEAGSGDGGDNEATAKERTVVVLAMPDSSDGRGVSLSLAKAATDKCRELGAAAAVDRGWALRSLDIGSRVPFDGHDLSDDDIRRPSGQRGGGSSKRAA--SRLSIPRPRCGDARPRTEVLLDLEDDGGRRSAMAEAVRADREKTARLLRIAEEVSKAPTKQ-VPASDPPPAPGADGFEFTRNGSKKKAKGPPNVTTFAAENKAQRDLKEALHKVGYLDADSSDP---------DKEHRLGEFWFDLVYDGFFMKRSENAIPEAKRRGCPVDVLRAEFESHDAIQTDRSRANVEKLPGEFPLWKAGNGSEDAVELL 409 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15526.1 >prot_C-linearis_contig8.15526.1 ID=prot_C-linearis_contig8.15526.1|Name=mRNA_C-linearis_contig8.15526.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2312bp MEGAREIRKGFMCSICNEFLRDSYNLPCGHTFCLECTNDALADNNACPTCback to top mRNA from alignment at C-linearis_contig8:1050583..1061511+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15526.1 ID=mRNA_C-linearis_contig8.15526.1|Name=mRNA_C-linearis_contig8.15526.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=10929bp|location=Sequence derived from alignment at C-linearis_contig8:1050583..1061511+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:1050583..1061511+ >mRNA_C-linearis_contig8.15526.1 ID=mRNA_C-linearis_contig8.15526.1|Name=mRNA_C-linearis_contig8.15526.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=13872bp|location=Sequence derived from alignment at C-linearis_contig8:1050583..1061511+ (Chordaria linearis ClinC8C monoicous)back to top |