mRNA_C-linearis_contig8.15487.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15487.1 vs. uniprot
Match: D7G581_ECTSI (Chlorophyll synthase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G581_ECTSI) HSP 1 Score: 743 bits (1918), Expect = 3.410e-267 Identity = 372/424 (87.74%), Postives = 387/424 (91.27%), Query Frame = 3
Query: 54 MVSSSVFASFAAASVIGVGAFHVPVLPSNRALVGNGQGHVSRMSAADDKAKSFYPFLRSNAPTTSRSGSVLPLAA--KPTPETQGGTKEGEGSVGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSIGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQASYLQVIILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVGSIDATQLGIAAWLYSIGEPTYAAVLTGLVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1319
MVS V AS A SV G GAFHVP LPS RA + HVSRMS ADDK KSFYPF RS+AP+T R GS+ L A PTPET+GGTKEGEG+ GAFRQLVGLKGASTTD+ILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNP GGGDVSFDLGSQDLLKALGCM+LSGPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMV ALS+GGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQ V+ILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKW+CVGSIDATQLGIAAWLY IGEPTYAA+LT LVLPQ+FAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALA+GHHTF
Sbjct: 1 MVSPWVVASVGALSVGGAGAFHVPALPSARATAAANR-HVSRMSTADDKPKSFYPFQRSDAPST-RPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDEILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPFGGGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQ-----VVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAMGHHTF 417
BLAST of mRNA_C-linearis_contig8.15487.1 vs. uniprot
Match: A0A835YRI7_9STRA (Chlorophyll synthase, putative chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRI7_9STRA) HSP 1 Score: 570 bits (1468), Expect = 6.470e-199 Identity = 290/376 (77.13%), Postives = 316/376 (84.04%), Query Frame = 3
Query: 195 DKAKSFYPFLRSNAPTTSRS-GSVLPLAAKPTPETQGGTKEGEGSVGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPLG--GGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSIGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQASYLQVIILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVGSIDATQLGIAAWLYSIGEPTYAAVLTGLVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHH 1313
++A FYPF + AP+ +R +V PL A ++G+G+V RQL+G+KGAS TDD+LKIRLQLTKPVTWIPL+WGV+CGAAASGNYH WNPL G VS DL KAL CMVL+GPFLTGYTQTINDWYDR+IDAINEPYRPIPSG I+E QV QI FLL GGLA+AYGLD+WAGHD P +L LSI GSFISYIYSAPP+KLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQ V++LTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVE AKWICV SID TQLGIAAWLYS+GEPTYAAVLT LVLPQI+AQFKYFLPDPV NDVKYQATAQPFLVFGILTTALAVG H
Sbjct: 47 ERAAPFYPFPDAVAPSAARPRAAVAPLRAS--------KEDGDGAV---RQLLGVKGASDTDDLLKIRLQLTKPVTWIPLLWGVICGAAASGNYHTWNPLAAEGTAVSGADALGDLAKALVCMVLAGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGKITEGQVKAQIAFLLGGGLALAYGLDLWAGHDTPTILLLSIFGSFISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQ-----VVVLTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDLTQLGIAAWLYSVGEPTYAAVLTALVLPQIYAQFKYFLPDPVENDVKYQATAQPFLVFGILTTALAVGRH 406
BLAST of mRNA_C-linearis_contig8.15487.1 vs. uniprot
Match: B7G006_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G006_PHATC) HSP 1 Score: 523 bits (1347), Expect = 2.420e-180 Identity = 264/400 (66.00%), Postives = 301/400 (75.25%), Query Frame = 3
Query: 126 VLPSNRALVGNGQGHVSRMSAADDKAKSFYPFLRSNAPTTSR-SGSVLPLAAKPTPETQGGTKEGEGSVGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSIGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQASYLQVIILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVGSIDATQLGIAAWLYSIGEPTYAAVLTGLVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1319
+LPSN+ H S K SFYPF S+ +T R + S + L AKP P E E RQL+GLKGAS +I KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNPL D + LG +D LK M+L+GPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISE +VI QIW LLLGGL IAYGLDVWAGH+ P VL LSI GSFISYIYSAPP+KLKQNGW GNYALG+SYISLPWWCGQA+FG L+ + IL +LYS AGLGIAIVNDFKS+EGDR +GLQSLPVAFG++KAKWIC GS+ TQLG+AA+L ++GE YA +L L+LPQ++ Q LPDPV NDVKYQA+AQPFLVFGIL TAL +GHH F
Sbjct: 36 MLPSNK-----NANHARHKSLRPPKTSSFYPFDESSTTSTKRPTTSGVSLQAKPGPNA-----EAEDGSAGVRQLLGLKGASAESNIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPLDPNDRNVMLGLEDALKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWILLLGGLGIAYGLDVWAGHETPTVLLLSIFGSFISYIYSAPPLKLKQNGWAGNYALGASYISLPWWCGQAVFGTLDKPVYF----ILPILYSIAGLGIAIVNDFKSIEGDRALGLQSLPVAFGIDKAKWICAGSVTLTQLGVAAYLQTLGESLYAGILIALILPQMYFQATLLLPDPVENDVKYQASAQPFLVFGILATALCIGHHDF 421
BLAST of mRNA_C-linearis_contig8.15487.1 vs. uniprot
Match: K0RLR8_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RLR8_THAOC) HSP 1 Score: 518 bits (1333), Expect = 2.320e-178 Identity = 259/377 (68.70%), Postives = 294/377 (77.98%), Query Frame = 3
Query: 192 DDKAKSFYPFLRSNAPTTSRSGSVLPLAAKPTPETQGGTKEGEGSVGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSIGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQASYLQVIILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVGSIDATQLGIAAWLYSIGEPTYAAVLTGLVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1319
D S+YPF S + S ++ L+A+P P++ +G +V RQL+GLKGAS T DI KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNP D LG +D K M+L+GPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISE QVI QIWFLLLGGL IAYGLD WAGHD P VL LSI GSFISYIYSAPP+KLKQNGW GNYALG SYISLPWWCGQA+FGEL+ + IL +LYS AGLGIAIVNDFKSVEGDR++GLQSLPVAFG++ AKWIC GS+ TQLG+AA+L SI E TYAA+L GL+LPQI+ Q +PDPV NDVKYQA++QPF VFGIL TAL +GHH F
Sbjct: 49 DSTRASYYPFGASTS-----SDRLISLSARP-PKSNEEVTDGSANV---RQLLGLKGASETTDIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPFDPNDRDVMLGLEDTAKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGQVIAQIWFLLLGGLGIAYGLDAWAGHDVPTVLLLSIFGSFISYIYSAPPLKLKQNGWAGNYALGCSYISLPWWCGQAVFGELDRPVYF----ILPILYSIAGLGIAIVNDFKSVEGDRQLGLQSLPVAFGIDTAKWICAGSVTVTQLGVAAYLQSINETTYAAILMGLLLPQIYYQATLLIPDPVANDVKYQASSQPFFVFGILATALCLGHHDF 412
BLAST of mRNA_C-linearis_contig8.15487.1 vs. uniprot
Match: B8C067_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C067_THAPS) HSP 1 Score: 516 bits (1330), Expect = 3.880e-178 Identity = 264/398 (66.33%), Postives = 305/398 (76.63%), Query Frame = 3
Query: 132 PSNRALVGNGQGHVS-RMSAADDKAKSFYPFLRSNAPTTSRSGSVLPLAAKPTPETQGGTKEGEGSVGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSIGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQASYLQVIILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVGSIDATQLGIAAWLYSIGEPTYAAVLTGLVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1319
P+ R+ VG Q S M + SFYPF + ++ L+A P P++ +G V RQL+G+KGAS T DI KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNP D + LG +D+ K M+L+GPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE QVI QIWFLLLGGL IAYGLDVWAGHDFP VLALSI GS++SYIYSAPP+KLKQNGW GNYALG SYISLPWWCGQA+FGEL+ + +L +LYS AGLGIAIVNDFKS+EGDRE+GLQSLPVAFGV+ AK+IC GS+ TQLG+AA+L SIGE TYAA+L GL+LPQI+ Q LPDPV NDVKYQA++QPF VFGIL TAL +GHH F
Sbjct: 17 PAPRSFVGVQQRSSSLSMLPTKQQTDSFYPFDKESSSK---------LSAVP-PKSNEEVSDGSADV---RQLLGVKGASGTTDIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPFDPNDRNVMLGLEDMAKGFVAMILAGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEGQVIFQIWFLLLGGLGIAYGLDVWAGHDFPTVLALSIFGSWVSYIYSAPPLKLKQNGWAGNYALGCSYISLPWWCGQAVFGELDRPVYF----VLPILYSIAGLGIAIVNDFKSIEGDRELGLQSLPVAFGVDGAKYICAGSVTLTQLGVAAYLQSIGETTYAAILLGLLLPQIYFQATLLLPDPVANDVKYQASSQPFFVFGILATALCLGHHDF 397
BLAST of mRNA_C-linearis_contig8.15487.1 vs. uniprot
Match: A0A7S1ZAA9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAA9_TRICV) HSP 1 Score: 512 bits (1319), Expect = 4.630e-177 Identity = 255/373 (68.36%), Postives = 291/373 (78.02%), Query Frame = 3
Query: 204 KSFYPFLRSNAPTTSRSGSVLPLAAKPTPETQGGTKEGEGSVGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSIGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQASYLQVIILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVGSIDATQLGIAAWLYSIGEPTYAAVLTGLVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1319
+SF PF S RS + LP + P + G+ G RQL+GLKGAS T D KIRLQLTKPVTW+PL+WGV+CGAAASGNYHW WNP D LG++D LK M+L+GPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISE +VI QIW LLLGGL IAYGLDVWAGH+FP VLALS+ GSFISYIYSAPP+KLKQNGW GN+ALG+SYISLPWWCGQA+FGEL+ + IL +LYS AGLGIAIVNDFKS+EGDR +GL SLPVAFG++ AK+IC GS+ TQLG+A +LYSI EPTYAA+L L+LPQI+ Q LPDPV NDVKYQA++QPFLVFGIL TAL VGHH F
Sbjct: 3 ESFSPFADSR-----RSETSLPASRGPNEKATDGS-------GDVRQLLGLKGASETTDKWKIRLQLTKPVTWVPLVWGVMCGAAASGNYHWMWNPFDPNDRDVLLGAEDALKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWILLLGGLGIAYGLDVWAGHEFPTVLALSVFGSFISYIYSAPPLKLKQNGWAGNFALGASYISLPWWCGQAVFGELDKPVYW----ILPILYSIAGLGIAIVNDFKSIEGDRALGLNSLPVAFGIDGAKYICAGSVTLTQLGVAGYLYSINEPTYAAILLALILPQIYFQATLLLPDPVENDVKYQASSQPFLVFGILATALCVGHHDF 359
BLAST of mRNA_C-linearis_contig8.15487.1 vs. uniprot
Match: A0A7S1XSB6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSB6_9STRA) HSP 1 Score: 514 bits (1324), Expect = 9.140e-177 Identity = 266/396 (67.17%), Postives = 300/396 (75.76%), Query Frame = 3
Query: 144 ALVGNGQGHVSRMSAADDKAK--SFYPFLRSNAPTTSRSGSVLPLAAKPTPETQGGTKEGEGSVGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPLGGGDVSFDLGS--QDLLKALGCMVLSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSIGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQASYLQVIILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVGSIDATQLGIAAWLYSIGEPTYAAVLTGLVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1319
AL G + R A K SF+PF +S P P+A + K+ GA RQL+G+KGAS TD+I KIRLQLTKPVTW+PLIWGV+CGAAASGNYH WNP D + D+ + +D LKA CM+LSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISE +VI QIWFLLLGGL +A LD+WAGH+ P V LS+ GSFISYIYSAPP+KLKQNGW+GNYALGSSYISLPWWCGQAMFGELN Q V ILTLLYSWAGLGIAIVNDFKSVEGDR MGLQSLPVAFGV+KAKWICV SIDATQ +AA+L G+ YAA LT L+LPQ++ Q K+FL DPV DV+YQA+AQPFLV GIL TALAVGH +
Sbjct: 46 ALAPRAPGRLGRTVLAQPKLTQGSFFPFEKSQMPFAD------PMAVEKESTVTLQAKKEANDGGAARQLLGVKGASETDNIWKIRLQLTKPVTWVPLIWGVVCGAAASGNYHTWNPF---DATVDVSACTEDALKAFVCMILSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIFQIWFLLLGGLGLAGALDLWAGHETPTVFLLSLFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPWWCGQAMFGELNWQ-----VCILTLLYSWAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGVDKAKWICVASIDATQAAVAAYLAYNGQYGYAAALTALILPQMYFQQKFFLKDPVEYDVQYQASAQPFLVLGILVTALAVGHADY 427
BLAST of mRNA_C-linearis_contig8.15487.1 vs. uniprot
Match: A0A7S2Q1P8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q1P8_9STRA) HSP 1 Score: 513 bits (1320), Expect = 1.750e-176 Identity = 261/387 (67.44%), Postives = 298/387 (77.00%), Query Frame = 3
Query: 162 QGHVSRMSAADDKAKSFYPFLRSNAPTTSRSGSVLPLAAKPTPETQGGTKEGEGSVGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSIGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQASYLQVIILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVGSIDATQLGIAAWLYSIGEPTYAAVLTGLVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1319
Q +S + ++ SFYPF P+T S S L AKP P + +G + RQL+G+KGA+ ++DI KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNP D LG +D K M+L+GPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISE QVI QIWFLLLGGL IAYGLDVWAGHDFP VLALSI GS++SYIYSAPP+KLKQNGW GNYALG SYISLPWWCGQA+FGEL+ + IL +LYS AGLGIAIVNDFKSVEGDR+MGL SLPVAFG++ AK+IC GS+ TQLG+AA+LYSIGE YAA L L+LPQI+ Q LPDPV NDVKYQA++QPF VFGIL TAL +GHH F
Sbjct: 34 QSSLSMLPTNNNNEDSFYPF-----PST-ESSSNFRLDAKP-PTSNDEVTDGSADL---RQLLGVKGAAGSEDIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPFDPNDRDVMLGLEDTAKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGQVIFQIWFLLLGGLGIAYGLDVWAGHDFPTVLALSIFGSWVSYIYSAPPLKLKQNGWAGNYALGCSYISLPWWCGQAVFGELDRPVYF----ILPILYSIAGLGIAIVNDFKSVEGDRQMGLNSLPVAFGIDGAKYICAGSVTLTQLGVAAYLYSIGETNYAAGLLALLLPQIYFQATLLLPDPVANDVKYQASSQPFFVFGILATALCLGHHDF 406
BLAST of mRNA_C-linearis_contig8.15487.1 vs. uniprot
Match: A0A7S0CSL5_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CSL5_9EUKA) HSP 1 Score: 516 bits (1328), Expect = 7.730e-176 Identity = 254/353 (71.95%), Postives = 290/353 (82.15%), Query Frame = 3
Query: 264 LPLAAKPTPETQGGTKEGEGSVGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSIGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQASYLQVIILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVGSIDATQLGIAAWLYSIGEPTYAAVLTGLVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1319
+ +A K +TQ + G+ RQL+GLKGAS TD+I KIRLQL KPVTW+PLIWGV+CGAAASGNYH W+ ++ +D+ K+LGCM+L+GP LTGYTQTINDWYDREIDAINEPYRPIPSGAISE +VI QIW LLLGGL +AYGLD WAGHDFPMV ALSIGGSF+SYIYSAPP+KLKQ+GW GNYALGSSYI+LPWWCGQAMFG LN VI+L+LLYS AGLGIAIVNDFKS+EGDR++GLQSLPVAFGV+ AKWIC GSID TQLG+AA+LYSIGE TYA +L GL+LPQ+F Q KY L DP+ DV+YQA AQPFLVFGIL TALAVGHHTF
Sbjct: 189 IAIAHKTASKTQVLAEPDNSDDGSVRQLLGLKGASQTDNIWKIRLQLMKPVTWVPLIWGVVCGAAASGNYHSIWS-----GAPLEVCLEDVGKSLGCMLLAGPLLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWALLLGGLGLAYGLDQWAGHDFPMVTALSIGGSFVSYIYSAPPLKLKQSGWAGNYALGSSYIALPWWCGQAMFGTLNAP-----VIVLSLLYSIAGLGIAIVNDFKSIEGDRQLGLQSLPVAFGVDTAKWICAGSIDITQLGVAAYLYSIGETTYANILMGLILPQMFLQNKYLLKDPIKYDVQYQAAAQPFLVFGILDTALAVGHHTF 531
BLAST of mRNA_C-linearis_contig8.15487.1 vs. uniprot
Match: A0A6V1M160_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M160_HETAK) HSP 1 Score: 506 bits (1303), Expect = 4.320e-174 Identity = 252/376 (67.02%), Postives = 296/376 (78.72%), Query Frame = 3
Query: 195 DKAKSFYPFLRSNAPTTSRSGSVLPLAAKPTPETQGGTKEGEGSVGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPLG---GGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSIGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQASYLQVIILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVGSIDATQLGIAAWLYSIGEPTYAAVLTGLVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHH 1313
DK+K+F+PF S+ P++++ L AK E + G +QL+G++GAS TDD+L+IR+QLTKPVTWIPLIWGV+CGAAASGNY W NPL G V D G D K + CM+L+GPFLTG+TQTINDWYDREIDAINEP RPIPSG ISE++VI QIWFLLLGGL +AYG+DVW GHD P V LS+ GSFISYIYSAPP+KLKQ+ W+GNYALG+SYI+LPWWCGQA FGEL V++LT+LYS AGLGIAIVNDFKS+EGDR +GLQSLPVAFGVEKAKWICV +ID TQL +AA+LY G+PTY VL GLVLPQI Q KY +PDP+ NDVKYQA+AQPFLVFGILTTALA+GH
Sbjct: 40 DKSKTFFPF-ESSMPSSTQ------LMAKKD------DSEEKDDRGDLKQLLGIRGASETDDVLRIRIQLTKPVTWIPLIWGVICGAAASGNYEWSNPLTVGMEGHVPLDKGLSDFAKVVTCMILAGPFLTGFTQTINDWYDREIDAINEPNRPIPSGKISEEEVIGQIWFLLLGGLGLAYGIDVWVGHDVPTVFLLSVFGSFISYIYSAPPLKLKQS-WVGNYALGASYIALPWWCGQAAFGELTWD-----VVVLTVLYSLAGLGIAIVNDFKSIEGDRALGLQSLPVAFGVEKAKWICVSTIDVTQLAVAAYLYWSGQPTYGLVLLGLVLPQIALQAKYLIPDPINNDVKYQASAQPFLVFGILTTALAIGHR 396 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15487.1 >prot_C-linearis_contig8.15487.1 ID=prot_C-linearis_contig8.15487.1|Name=mRNA_C-linearis_contig8.15487.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=423bp MVSSSVFASFAAASVIGVGAFHVPVLPSNRALVGNGQGHVSRMSAADDKAback to top mRNA from alignment at C-linearis_contig8:700752..705109+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15487.1 ID=mRNA_C-linearis_contig8.15487.1|Name=mRNA_C-linearis_contig8.15487.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4358bp|location=Sequence derived from alignment at C-linearis_contig8:700752..705109+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:700752..705109+ >mRNA_C-linearis_contig8.15487.1 ID=mRNA_C-linearis_contig8.15487.1|Name=mRNA_C-linearis_contig8.15487.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2538bp|location=Sequence derived from alignment at C-linearis_contig8:700752..705109+ (Chordaria linearis ClinC8C monoicous)back to top |