mRNA_C-linearis_contig8.15476.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15476.1 vs. uniprot
Match: D8LUD2_ECTSI (DRMBL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD2_ECTSI) HSP 1 Score: 571 bits (1472), Expect = 4.780e-191 Identity = 386/726 (53.17%), Postives = 436/726 (60.06%), Query Frame = 1
Query: 58 MATQDEKIKWVEGSPFMVDGFRFQTPECRHYLLTHFHSDHTTGLYKSFSAGTIYTSDGTAKLIVDLMGVNQERVVALEMDKPHVVAGFELTLIDANHCPGAVMFVIRDPRPGGRISLHTGDFRADKSVCTNPVVKSLKGIVDSLYLDTTYCGPRHTFPDQHEVLEQAAHLVRLELQRDPNTLFLVGTYSIGKERVLEVVAKALGNTNSPTTLLGVLAEARAGGAPFTSVVGVRPTGWTHTNARKGAGDNAG-GVQSSITVTPAGGGAGG-----------QKGKAGNAPSVRPERNSSGACDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPWGGKKPWIDGNARVYSLSYSEHSSFNQLKDFVRAVRPKKIVPTVNAASSASVEKMLGHFLEFMDLSSDRKRLDSYFCK-PITAANVSSSCGVFSPAGVEAPKSVFGASAEKRRKTSNSATAGPTHF-----------SRSIGRHTGENSGALGTTTTS-------RGDCQRSTTRRGERKISRPGVVMENPPAAAGGCSTAVSAAASAALA-INVSGDDALVDLHLGDVDVEAQKAIMADIERRKAENRRGRGCERLDQTPGSAKREDRTPGGALPTPGAGKGKAGKAPGAAVSRTDSRSAR-----RVISIKAQATTAAVVAPKSEGGPDGQQVFTVDDESAGT--CSPMDIRDFFSKR 2118
MATQDEKIKWVEGSPFMVDGFRF P CRHYLLTHFHSDHTTGLYKSFSAG IY S GTA LIV+LMGVN+ERVVAL MD P +VAGF+LTLIDANHCP AVMFVIRDPRPGGR +LHTGDFRA +SVC NPVVKSLKG +DSLYLDTTYCGPRHTFPDQ EVL QA LVR+ELQRDPNTLFLVGTYSIGKE+VLE VAK +TNSP TL L +ARAGGAPFTSVVGVRPTGWTHTNARKG G++SSI GG + GK G+ + + S D XXXXXXXXXX PW GKKPW+DG ARVYSL YSEHSSF QLKDFVR VRPKKIVPTVNA SSASVEKML HFLEFMDLSSDRKRL+SYFCK +A S + S +G A + F + AEKRRK +NS+T P + + EN GTT G+ RS R GE+ G + E A A+ A + A A + + V+L L VDVEAQKAIMADIERRK + + G RE R TPG+G+ + + + R + R +V+S T A +S GG G +V T+DDE GT PMDIRDFFS+R
Sbjct: 1 MATQDEKIKWVEGSPFMVDGFRFTNPRCRHYLLTHFHSDHTTGLYKSFSAGKIYCSHGTANLIVELMGVNRERVVALPMDTPVLVAGFDLTLIDANHCPAAVMFVIRDPRPGGRTTLHTGDFRAAESVCRNPVVKSLKGRLDSLYLDTTYCGPRHTFPDQSEVLAQATQLVRMELQRDPNTLFLVGTYSIGKEKVLEAVAK---DTNSPATLREALTKARAGGAPFTSVVGVRPTGWTHTNARKGXXXXXXXGIKSSIGGRSXXXXXGGPAVRSGAEEREETGKEGSGITSSSKPQDSVGDDISGEPELLSEWEDQDDEAAAWGAGLEEDGNEETMQVTANGVGVVPXXXXXXXXXXTVAGPAVGPWTGKKPWVDGVARVYSLPYSEHSSFTQLKDFVRTVRPKKIVPTVNAVSSASVEKMLSHFLEFMDLSSDRKRLESYFCKRDPPSATASRGIDMLSSSGARA-SNPFSSPAEKRRKNANSSTGWPPNLFPAEKPSRPPLKAAERNRLHENDATSGTTLDDYPCVPRREGEALRS--RAGEQPCGDAGRLPEATMTAEAAVPAAMPARSFVADAGARAASTPSAVELDL--VDVEAQKAIMADIERRKRGQQETKATGAHTAQSGGNSRESRRKS----TPGSGRKRTNSSTRSDDGRPADANLRGFFGGKVVSDAKGTRTLA----ESVGGCRGHEVLTIDDEDCGTELPEPMDIRDFFSRR 710
BLAST of mRNA_C-linearis_contig8.15476.1 vs. uniprot
Match: W7THR8_9STRA (Dna cross-link repair 1a protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THR8_9STRA) HSP 1 Score: 226 bits (576), Expect = 6.560e-63 Identity = 148/433 (34.18%), Postives = 193/433 (44.57%), Query Frame = 1
Query: 58 MATQDEKIKWVEGSPFMVDGFRFQTPECRHYLLTHFHSDHTTGLYKSFSAGTIYTSDGTAKLIVDLMGVNQERVVALEMDKPHVVAGFELTLIDANHCPGAVMFVIRDPRPGGRISLHTGDFRADKSVC--TNPVVKSLKGIVDSLYLDTTYCGPRHTFPDQHEVLEQAAHLVRLELQRDPNTLFLVGTYSIGKERVLEVVAKALGNTNSPTTLLGVLAEARAGGAPFTSVVGVRPTGWTHTNARKGAGDNAGGVQSSITVTPAGGGAGGQKGKAGNAPSVRPERNSSGACDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPWGGKKPWID--GNARVYSLSYSEHSSFNQLKDFVRAVRPKKIVPTVNAASSASVEKMLGHFLEFMDLSSDRKRLDSY 1344
MA+Q E+IKW+EG+ F+VDGF F +P+C Y LTHFHSDH GL SF GTIY SD T L+V +GV + V L ++KP + G E+TL+DANHCPGAVM + + + I LHTGDFRA +++ T ++ V LYLDTTYC ++TFP Q VL + + E P+T+F VGTYSIGKER + VA +G W++ RK A D SS T PW++ A++Y + YSEHSS+ +L+ FVRA+RP+KI+PTV A VE+ L HFL MDLS DR RLD Y
Sbjct: 1 MASQVERIKWIEGTSFLVDGFNFLSPKCSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTKSTI-LHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIG--------------------------------WSYLRNRKTARDACPSSPSSYT-----------------------------------------------------------------------------------------------------PWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRY 299
BLAST of mRNA_C-linearis_contig8.15476.1 vs. uniprot
Match: A0A8J9WR85_9CHLO (Probable DNA cross-link repair 1A protein at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR85_9CHLO) HSP 1 Score: 234 bits (596), Expect = 7.600e-62 Identity = 163/484 (33.68%), Postives = 219/484 (45.25%), Query Frame = 1
Query: 58 MATQDEKIKWVEGSPFMVDGFRFQTPECRHYLLTHFHSDHTTGLYKSFSAGTIYTSDGTAKLIVDLMGVNQERVVALEMDKPHVVAGFELTLIDANHCPGAVMFVIRDPRPGG-----RISLHTGDFRADKSVCTNPVVKSLKGIVDSLYLDTTYCGPRHTFPDQHEVLEQAAHLVRLELQRDPNTLFLVGTYSIGKERVLEVVAKALG-----NTNS---------PTTLLGVLAEARAGGAPFTSVVG-----------VRPTGWTHTNARKGAGDNAGGVQSSITVTPAGGGAGGQKGKAGNAPSVRPERNSSGACDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPWGGKKPWIDGNARVYSLSYSEHSSFNQLKDFVRAVRPKKIVPTVNAASSASVEKMLGHFLEFMDLSSDRKRLDSYFCKPITA--ANVSSSCGVFSPAGVE 1413
MA Q E IKWV +PFMVDGFRFQTP C+HY L+H+HSDHT GL SFSAGTIY S TA L+V M +N + L +D P +V G +TLIDANHCPGAV+F+ + P P G ++ LHTGD R + +P + + +D L+LDTTY P+H FP Q + ++R E P TLF+VG+Y IGKER AKALG N + P + + +L + A S +G +R T WTH A + P+ + S +C +G+ +Y + YSEHSSF +L+D V+ +RP++IVPTVNA++ A+ ++ F + MDLS DR RLD + K TA A SS+ V P G E
Sbjct: 1 MAEQVENIKWVPNTPFMVDGFRFQTPRCKHYWLSHYHSDHTIGLSTSFSAGTIYCSKVTANLLVKDMRINPSCIQPLPLDTPLLVDGVHVTLIDANHCPGAVLFLFKTPAPPGSEFPEQVILHTGDMRWHPRMGRHPALAKQR--IDMLFLDTTYASPKHVFPCQENAIADIVKVMRKERDAHPRTLFIVGSYRIGKERAYLGAAKALGWKVYVNADKLRVLRLLGLPDSDMALLTKDAAAAQIHVSFMGKLLTPDALTERIRGTKWTHVVAFR--------------------------------PTGWSFQKSGLSCRR-----------------------------------------------------------------------EGDVAIYGIPYSEHSSFAELRDCVKTLRPRRIVPTVNASTPAAARSLVDRFADLMDLSKDRSRLDFFLRKAKTAPPATASSAPSVV-PEGTE 378
BLAST of mRNA_C-linearis_contig8.15476.1 vs. uniprot
Match: A0A1Y1HYN4_KLENI (Putative DNA repair metallo-beta-lactamase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYN4_KLENI) HSP 1 Score: 228 bits (582), Expect = 3.280e-59 Identity = 149/468 (31.84%), Postives = 204/468 (43.59%), Query Frame = 1
Query: 58 MATQDEKIKWVEGSPFMVDGFRFQTPECRHYLLTHFHSDHTTGLYKSFSAGTIYTSDGTAKLIVDLMGVNQERVVALEMDKPHVVAGFELTLIDANHCPGAVMFVIRDPRPGGR---ISLHTGDFRADKSVCTNPVVKSLKGIVDSLYLDTTYCGPRHTFPDQHEVLEQAAHLVRLELQRDPNTLFLVGTYSIGKERVLEVVAKALG--------------------------NTNSPTTLLGVLAEARA---------GGAPFTSVVGVRPTGWTHTNARKGAGDNAGGVQSSITVTPAGGGAGGQKGKAGNAPSVRPERNSSGACDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPWGGKKPWIDGNARVYSLSYSEHSSFNQLKDFVRAVRPKKIVPTVNAASSASVEKMLGHFLEFMDLSSDRKRLDSYF 1347
MA Q E IKW+ G+ FMVDGF+FQ CR Y LTHFHSDHT GLY+SF++GTI+ S TA L+++ MG+ + + L MDK + G E+T +DANHCPG+VM + + P GGR + LHTGDFR + + P +++ ++D++YLDTTY PRHTFP Q + + L R L + LF+ G Y IGKER + AKALG N LG ++E R GG + V+G RPTGW S R + G G A VY + YSEHSSF+ L+ + A+RP+KI+PTVNA + ++ F + MDLS++R R+D++F
Sbjct: 1 MALQQEAIKWIAGTDFMVDGFKFQNLRCRRYFLTHFHSDHTIGLYRSFNSGTIFCSRITAALLINCMGLRSDCIQVLPMDKTVTIDGVEVTALDANHCPGSVMLLFKVPGHGGRPAQVILHTGDFRYHERMADYPSLRNT--LIDTIYLDTTYAYPRHTFPSQEDAIATTVRLCRKHLLDEARPLFVFGAYQIGKERAVIGAAKALGLRVHIEPRKRRILSLLDLQDMDLFTPNAADADIHLGFMSEVRPPAMLRRLKEGGGKWAQVIGFRPTGW----------------------------------------SFRKD--------------------------------------------------------------------------GVHTTKQGLATVYGVPYSEHSSFDDLRACIAALRPRKIIPTVNADTKLKAANLVARFADLMDLSANRYRIDAFF 352
BLAST of mRNA_C-linearis_contig8.15476.1 vs. uniprot
Match: A0A4D9CSH8_9STRA (DRMBL domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH8_9STRA) HSP 1 Score: 218 bits (555), Expect = 2.820e-58 Identity = 171/468 (36.54%), Postives = 229/468 (48.93%), Query Frame = 1
Query: 58 MATQDEKIKWVEGSPFMVDGFRFQTPECRHYLLTHFHSDHTTGLYKSFSAGTIYTSDGTAKLIVDLMGVNQERVVALEMDKPHVVAGFELTLIDANHCPGAVMFVIRDPRPGGRISLHTGDFRADKSVC--TNPVVKSLKGIVDSLYLDTTYCGPRHTFPDQHEVLEQAAHLVRLELQRDPNTLFLVGTYSIGKERVLEVVAKALGNTNSPTTLLGVLAEARAGGAPFTSVVGVRPTGWTHTNAR-------KGAGDNAG----GVQSSITVTPAGGGAGGQKGKAGNAPSVRPERNS------------------------SGACDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPWGGKKPWID--GNARVYSLSYSEHSSFNQLKDFVRAVRPKKIVPTVNAASSASVEKMLGHFLEFMDLSSDRKRLDSY 1344
MA+Q E+IKW+EG+ F+VDGF F +P+C Y LTHFHSDH GL SF GTIY SD T L+V +GV + V L ++KP + G E+TL+DANHCPGAVM + + + I LHTGDFRA +++ T ++ V +LYLDTTYC ++TFP Q VL + + E P+T+F VGTYSIGKER + VA +G + L A + + V V +H + G AG G + + + G ++G+ G E + G + XXXXXXXXXXXXXXXXX S PW++ A++Y + YSEHSS+ +L+ FVRA+RP+KI+PTV A VE+ L HFL MDLS D+ RLD Y
Sbjct: 1 MASQVERIKWIEGTSFLVDGFNFLSPKCSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTNTTI-LHTGDFRASEALTERTASWLRDRDLRVRTLYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIGKVYADKHKERTLRLA----SEWDEEVFVSEMEGSHVRMSWLGRLRPEKMGPRAGARRMGQERGVEMRKEG-----REGEEGKDVGGNEEHSGWXXXXXXXXXXXXXXXXXXXXXXXEGKTEVGEKGDDEGGWEMEXXXXXXXXXXXXXXXXXEGDDACRPVVGFRPTGWSYLRNRKTARDACPSSPSSYTPWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDKSRLDRY 458
BLAST of mRNA_C-linearis_contig8.15476.1 vs. uniprot
Match: A0A812W2K7_SYMMI (Dclre1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W2K7_SYMMI) HSP 1 Score: 215 bits (547), Expect = 4.280e-55 Identity = 160/480 (33.33%), Postives = 212/480 (44.17%), Query Frame = 1
Query: 58 MATQDEKIKWVE--GSPFMVDGFRFQTPECRHYLLTHFHSDHTTGLYKSFSAGTIYTSDGTAKLIVDLMGVNQERVVALEMDKPHVVAGFELTLIDANHCPGAVMFVIRDPRPGGR-----ISLHTGDFRADKSVCTNPVVKSLKG-IVDSLYLDTTYCGPRHTFPDQHEVLEQAAHLVRLELQRDPNTLFLVGTYSIGKERVLEVVAKALGNTN-------SPTTLLGVLAEARAGGAPFTSVVGVRPTGW-------THTNARKGAGDNAGGVQSSITVTPAGGGAGGQKGKAGNAPSVRPERNSSGACDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPWGGKKPWI--DGNARVYSLSYSEHSSFNQLKDFVRAVRPKKIVPTVNAASSASVEKMLGHFLEFMDLSSDRKRLDSYF---------CKPITAANVSSSCGVFS 1398
MA + E+ K V + F+VDGF FQ + HY+LTHFHSDHT GL ++F GTIY +D TA LI ++MGV+ RVVAL + +P V G LT +DA HCPG+ M V + G + LHTGD RA + + ++ L G V L+LDTTYC R TFP Q E A L ELQR+P TLF+VG Y IGKER + VA+A G++ L G G P S+ W H + G +S + +P G A S + S C + WI DG RVYS+ YSEHSSF +L+ FV A++P +++PTVN+ + S E+M+ FL+ +DL D +R+D Y CKP T A S V S
Sbjct: 1 MAAKTEETKLVRLGSAEFLVDGFLFQRKDVSHYVLTHFHSDHTVGLTRNFDCGTIYCTDVTAALITEMMGVDAARVVALPLQQPLQVQGVWLTFVDAGHCPGSAMAVFEEDHSSGSSATQSVVLHTGDCRASAQI-RDGLMDWLAGRTVAELFLDTTYCARRWTFPAQQEACSWLAELTAAELQREPKTLFVVGCYQIGKERAAQAVAEAAGSSVFVEQRRWKVIQLAGWGEACLKSGQPLWSIDKEGCCVWMSALGGLAHDVLKHYLDSTKGQFESVVAFSPTGW-----------AWSPKAMAKGSAGC---------------------------------------------------------------------RAWIENDGRTRVYSVPYSEHSSFTELQSFVSAIKPGRLIPTVNSETRESKERMMAPFLDVLDLKCDPERMDHYIFGGSSSSSACKPETVARGESFVDVLS 399
BLAST of mRNA_C-linearis_contig8.15476.1 vs. uniprot
Match: A0A812Y568_SYMPI (Dclre1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812Y568_SYMPI) HSP 1 Score: 217 bits (552), Expect = 7.630e-55 Identity = 157/466 (33.69%), Postives = 212/466 (45.49%), Query Frame = 1
Query: 58 MATQDEKIKWVE--GSPFMVDGFRFQTPECRHYLLTHFHSDHTTGLYKSFSAGTIYTSDGTAKLIVDLMGVNQERVVALEMDKPHVVAGFELTLIDANHCPGAVMFVIRDPRPG------GRISLHTGDFRADKSVCTNPVVKSLKG-IVDSLYLDTTYCGPRHTFPDQHEVLEQAAHLVRLELQRDPNTLFLVGTYSIGKERVLEVVAKALGNT------NSPTTLLGVLAEARA-GGAPFTSVVGVRPTGW-------THTNARKGAGDNAGGVQSSITVTPAGGGAGGQKGKAGNAPSVRPERNSSGACDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPWGGKKPWI--DGNARVYSLSYSEHSSFNQLKDFVRAVRPKKIVPTVNAASSASVEKMLGHFLEFMDLSSDRKRLDSYF--------CKP 1356
MA + E+ K V + F+VDGF FQ + RHY+LTHFHSDHT GL ++F GTIY +D TA LI ++MGV+ RVV+L + +P V G LTL+DA HCPG+ M V + G + LHTGD RA + + +++ L G V L+LDTTYC R TFP QHE A L ELQR+P TLF+VG Y IGKER + VA+A ++ L +AR G P S+ W H + G +S + +P G A S + S C + WI DG RVYS+ YSEHSSF +L+ FV +++P +++PTVN+ + E+M+ FLE +DL DR+R+D Y CKP
Sbjct: 1 MAAKTEETKLVRFGSTEFLVDGFLFQRNDVRHYVLTHFHSDHTVGLTRNFECGTIYCTDVTAALITEVMGVDATRVVSLPLQQPLQVQGVWLTLLDAGHCPGSAMAVFEEDHSSSESSTKGSVVLHTGDCRASAQI-RDGLLEWLAGRTVAELFLDTTYCARRWTFPAQHEACNWLAELTAAELQREPKTLFVVGCYQIGKERAAQAVAEAAASSVFVEQRRWKVIQLAGWGDARLKSGRPLWSIDKEGCCVWMSALGGLAHDVLKHYLDSTKGQFESVVAFSPTGW-----------AWSPKAMAKGSAGC---------------------------------------------------------------------RAWIENDGRTRVYSVPYSEHSSFTELQAFVNSIKPGRLIPTVNSETREGKERMMAPFLEVLDLKGDRERMDHYIFGGSSSSTCKP 385
BLAST of mRNA_C-linearis_contig8.15476.1 vs. uniprot
Match: A0A812VXA3_9DINO (SNM1 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812VXA3_9DINO) HSP 1 Score: 214 bits (546), Expect = 5.420e-54 Identity = 159/480 (33.12%), Postives = 212/480 (44.17%), Query Frame = 1
Query: 58 MATQDEKIKWVE--GSPFMVDGFRFQTPECRHYLLTHFHSDHTTGLYKSFSAGTIYTSDGTAKLIVDLMGVNQERVVALEMDKPHVVAGFELTLIDANHCPGAVMFVIRDPRPGGR-----ISLHTGDFRADKSVCTNPVVKSLKG-IVDSLYLDTTYCGPRHTFPDQHEVLEQAAHLVRLELQRDPNTLFLVGTYSIGKERVLEVVAKALGNTN-------SPTTLLGVLAEARAGGAPFTSVVGVRPTGW-------THTNARKGAGDNAGGVQSSITVTPAGGGAGGQKGKAGNAPSVRPERNSSGACDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPWGGKKPWI--DGNARVYSLSYSEHSSFNQLKDFVRAVRPKKIVPTVNAASSASVEKMLGHFLEFMDLSSDRKRLDSYF---------CKPITAANVSSSCGVFS 1398
MA + E+ K V + F+VDGF FQ + HY+LTHFHSDHT GL ++F GTIY +D TA LI ++MGV+ RVVAL + +P V G LT +DA HCPG+ M V + G + LHTGD RA + + +++ L G V L+LDTTYC R TFP Q E A L ELQR+P TLF+VG Y IGKER + VA+A G++ L G G P S+ W H + G +S + +P G A S + S C + WI DG RVYS+ YSEHSSF +L+ FV A++P +++PTVN+ + S E+M+ FL+ +DL D +R+D Y CKP T S V S
Sbjct: 1 MAAKTEETKLVRLGSAEFLVDGFLFQRKDVSHYVLTHFHSDHTVGLTRNFDCGTIYCTDVTAALITEMMGVDAARVVALPLQQPLQVQGVWLTFVDAGHCPGSAMAVFEEDHSSGSSATQSVVLHTGDCRASAQI-RDGLMEWLAGRTVAELFLDTTYCARRWTFPAQQEACSWLAELTAAELQREPKTLFVVGCYQIGKERAAQAVAEAAGSSVFVEQRRWKVIQLAGWGDACLKSGQPLWSIDKEGCCVWMSALGGLAHDVLKHYLDSTKGQFESVVAFSPTGW-----------AWSPKAMAKGSAGC---------------------------------------------------------------------RAWIENDGRTRVYSVPYSEHSSFTELQSFVSAIKPGRLIPTVNSETRESKERMMAPFLDVLDLKCDPERMDHYIFGGSSSSSACKPETVGRCESFVDVLS 399
BLAST of mRNA_C-linearis_contig8.15476.1 vs. uniprot
Match: A0A2P6TNP6_CHLSO (DNA cross-link repair SNM1 isoform X1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TNP6_CHLSO) HSP 1 Score: 207 bits (527), Expect = 1.000e-52 Identity = 151/474 (31.86%), Postives = 199/474 (41.98%), Query Frame = 1
Query: 52 CLMATQDEKIKWVEGSPFMVDGFRFQTPECRHYLLTHFHSDHTTGLYKSFSAGTIYTSDGTAKLIVDLMGVNQERVVALEMDKPHVVAGFELTLIDANHCPGAVMFVIRDP--RPGGR--ISLHTGDFRADKSVCTNPVVKSLKGIVDSLYLDTTYCGPRHTFPDQHEVLEQAAHLVRLELQRDPNTLFLVGTYSIGKERVLEVVAKALG-------NTNSPTTLLGVLAE-----------------------------ARAGGAPFTSVVGVRPTGWTHTNARKGAGDNAGGVQSSITVTPAGGGAGGQKGKAGNAPSVRPERNSSGACDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPWGGKKPWIDGNARVYSLSYSEHSSFNQLKDFVRAVRPKKIVPTVNAASSASVEKMLGHFLEFMDLSSDRKRLDSYFCK 1353
MA+Q E IKWV G+ F+VDGFRFQ P CR Y LTH HSDHTTGL KSF+AG IY S TA+++ G+ + + LE+D+ +AG E+T +DANHCPGA MF+ + P PG + + LHTGD R + +P +K + VD L LDTTYC PR + P Q EV+ A + +P TLF+VG+Y IGKER A ALG + LLG+ AE R G + V ++PTGWT G D G+ ++ + YSEHSSF +L+D VRA+RP++I+PTVNA AS + F + MDLS+DR RL Y +
Sbjct: 425 AAMASQVEAIKWVPGTKFLVDGFRFQHPNCRAYFLTHAHSDHTTGLSKSFNAGPIYCSPVTARVLRHDFGLRPDCLRVLELDETATIAGVEVTPMDANHCPGAAMFLFKVPPSSPGSKAQVILHTGDMRWQPWMAEHPALKGQQ--VDILILDTTYCTPRWSLPPQSEVVAAMAEHMAAAAAAEPATLFVVGSYHIGKERAYLGAAAALGWRVHCTPTKHRLLRLLGLPAEWLALLTEQPEEAQIHVLSMGEQLHEQALADRIEGTAWKRAVALKPTGWTW--------------------------------------------RQKGGLDVRDL---------------------------------------------------------------------GSVQLVGVPYSEHSSFPELRDCVRALRPRRIIPTVNAGDPASSRAQVDRFADLMDLSADRSRLSYYLLR 783
BLAST of mRNA_C-linearis_contig8.15476.1 vs. uniprot
Match: A0A7S2WP51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WP51_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.270e-50 Identity = 99/197 (50.25%), Postives = 125/197 (63.45%), Query Frame = 1
Query: 55 LMATQDEKIKWVEG--SPFMVDGFRFQTPECRHYLLTHFHSDHTTGLYKSFSAGTIYTSDGTAKLIVDLMGVNQERVVALEMDKPHVVAGFELTLIDANHCPGAVMFVIRDPRPGGRISLHTGDFRADKSVCTNPVVKSL--KGIVDSLYLDTTYCGPRHTFPDQHEVLEQAAHLVRLELQRDPNTLFLVGTYSIGK 633
+MA Q IK V G S F+VDGF F EC+ Y LTH+H DHTTGL+ F GTIY S+ TA+L+V +GV + V L + + V G + +DA HCPGAVMF DP G R+ LH GDFRA++ V +P + + +G +D LYLDTTYC P HTFPDQ VL +VR EL ++ TLF+VGTY IGK
Sbjct: 2 VMAAQTSSIKAVRGLSSRFIVDGFNFVEAECKSYFLTHYHGDHTTGLHAGFDLGTIYCSEVTARLVVHDLGVASKLVCVLPLHEWTTVEGVHVMPVDACHCPGAVMFFFDDPTAGRRV-LHCGDFRAEECVVESPHLAAALARGPLDELYLDTTYCRPTHTFPDQPAVLRDVEAIVRHELGQERRTLFVVGTYQIGK 197 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15476.1 >prot_C-linearis_contig8.15476.1 ID=prot_C-linearis_contig8.15476.1|Name=mRNA_C-linearis_contig8.15476.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=689bp MATQDEKIKWVEGSPFMVDGFRFQTPECRHYLLTHFHSDHTTGLYKSFSAback to top mRNA from alignment at C-linearis_contig8:549445..553826- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15476.1 ID=mRNA_C-linearis_contig8.15476.1|Name=mRNA_C-linearis_contig8.15476.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4382bp|location=Sequence derived from alignment at C-linearis_contig8:549445..553826- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:549445..553826- >mRNA_C-linearis_contig8.15476.1 ID=mRNA_C-linearis_contig8.15476.1|Name=mRNA_C-linearis_contig8.15476.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4134bp|location=Sequence derived from alignment at C-linearis_contig8:549445..553826- (Chordaria linearis ClinC8C monoicous)back to top |