mRNA_C-linearis_contig79.15422.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig79.15422.1 vs. uniprot
Match: A0A6H5JXQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ2_9PHAE) HSP 1 Score: 464 bits (1194), Expect = 1.830e-153 Identity = 242/438 (55.25%), Postives = 300/438 (68.49%), Query Frame = 1
Query: 634 STIKGEPNMTAQKFREYINKEIMPEIAATKTEEYNPFQHAPITKTTSDDGVVTYSTSLSTATSWLHKLGCQYRDPRSGLYFDGHDREDVLMYRVETYLPAYFEHRDYTEIWIDATCEEAQAWDVETHERDMGEEGRVWVCVHAFKETLCKLPGHLRKRVTSKKTYPDGKRAILCFQDECIYRGNDDQRCSWIPPSFNGIKKKGEGVGIMISGTIVDNVGFVAGDQADIGKAQELRRERC-RKAAEAGGLAEPEKYRDICKVKGLRQ-----------ILFERGLLVDGMSKTRS-KRGAKPNEALSMVAVLGK-----QKDFATVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKFWVRQHCKYTIQCLRENVSKSYVVEDDRLSLDIVQKYCRKVANYHWVYAEKHTGPNAVQKRREYRSHRKPAPSDFIN 1893
S GEPNMTA+ FREY+N +++P+ S ++ TA S LHKLGC+YRD +SGLYF+GHDREDVL YRVE YLPAYFEHRDY EIWI+AT +EA +W+V+ +D +GRVWVCVHAF+ETL +LP HLR+RVTSKKTY DG+RAI C+QDECIYR NDDQR +W+PP+++ +KKKG+G GIM SGTIVDNVGFVAGDQADI KAQ RR+RC A E P R +G+R+ +L + L +G + + + G P +GK Q+DFA+V+P+L+VLVKR GV+IMLPKFHCE+NPIELVWGRSK+WV +HCKYTI CLR NVSK Y V +DRLSL IVQK+CR VAN++ VY + G AVQKR + SHRKPAPS++IN
Sbjct: 57 SIKNGEPNMTAEGFREYLNTDVLPQ-----------------------------SVTVRTARSRLHKLGCEYRDRKSGLYFNGHDREDVLAYRVEKYLPAYFEHRDYMEIWIEATSDEAWSWEVQVQAQDRQNDGRVWVCVHAFRETLSELPQHLRERVTSKKTYSDGRRAIFCYQDECIYRANDDQRFAWVPPNYHALKKKGDGQGIMTSGTIVDNVGFVAGDQADIDKAQAFRRKRCDTSATEHAADGAPSATRMNAGYEGVRKGKQLAAQDATTLLVDTPKLKEGTVQYPTFQEGESPFYGPGAEDHIGKLKGLKQEDFASVEPNLVVLVKRHEGVSIMLPKFHCEINPIELVWGRSKYWVWRHCKYTIACLRTNVSKRYAVAEDRLSLAIVQKFCRTVANFNEVYRDGLQGAEAVQKRDTFESHRKPAPSEYIN 465
BLAST of mRNA_C-linearis_contig79.15422.1 vs. uniprot
Match: A0A6H5KDP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP5_9PHAE) HSP 1 Score: 411 bits (1056), Expect = 6.330e-131 Identity = 234/500 (46.80%), Postives = 289/500 (57.80%), Query Frame = 1
Query: 634 STIKGEPNMTAQKFREYINKEIMPEIAATKTEEYNPFQHAPITKTTSDDG----VVTYSTSLSTATSWLHKLGCQYRDPRSGLYFDGHDREDVLMYRVETYLPAYFEHRDYTEIWIDATCEEAQAWDVETHERDMGEEGRVWVCVHAFKETLCKLPGHLRKRVTSKKTYPDGKRAILCFQDECIYRGNDDQRCSWIPPSFNGIKKKGEGVGIMISGTIVDNVGFVAGDQAD-----------------IGKAQELRRERC-------------------RKAAEAGGLA--------------------------------------EPEKYRDICKVKGLRQILFERGLLVDGMSKTRSKRGA-KPNEALSMVAVLGKQKDFATVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKFWVRQHCKYTIQCLRENVSKSYVVEDDRLSLDIVQKYCRKVANYHWVYAEKHTGPNAVQKRREYRSHRKPAPSDFINP 1896
S GEPNMTA+ FREY+NK+++P++A TKT +Y+PF+HAP+TKTT++ VV+YS ++ TA SWLHKLGC+YRDP+SGLYFDGHDREDV YRVE YLPAYFEHRDY EIWI+AT +EA+ G+RAI C+QDECIYR ND QR W+PP+++ +KKKG+G GIMISGTIVDNVGF G D + + + C R A GG+ +P I K K L+Q+LFERGL MS K+G K + AL V G Q+DFA+V+PSL+VLVKR GVAIMLPK H E+NPIELVWGRSK+WVRQHCKYTI CLR NV+KSY V +DRL L IVQK+CR VAN++ VY++ G AVQKR ++SHRKPAPS++INP
Sbjct: 150 SIKNGEPNMTAEGFREYLNKDVLPQVADTKTCDYDPFKHAPVTKTTTETASGEIVVSYSVTVRTARSWLHKLGCEYRDPKSGLYFDGHDREDVPAYRVEKYLPAYFEHRDYMEIWIEATSDEAR-----------------------------------------------GRRAIFCYQDECIYRANDGQRFEWVPPNYHALKKKGDGQGIMISGTIVDNVGFEYGKSMDGYWTGAKMVEHMADVYLLAVKYPMHKPICFFDWSSCHDCVEDGAPSATRMNAGYGGVRKGKQLAAQDATTLLAHTPKLEKGTVQYLTFQEGESTFYDPGAEDHIGKHKRLKQVLFERGLCNADMSMKGIKKGQQKYDPALCTSVVFGTQEDFASVEPSLVVLVKRHEGVAIMLPKLHREINPIELVWGRSKYWVRQHCKYTIACLRTNVNKSYAVAEDRLGLAIVQKFCRTVANFNEVYSDGLQGAEAVQKRDTFKSHRKPAPSEYINP 602
BLAST of mRNA_C-linearis_contig79.15422.1 vs. uniprot
Match: A0A6H5JEX5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX5_9PHAE) HSP 1 Score: 404 bits (1039), Expect = 1.450e-127 Identity = 231/469 (49.25%), Postives = 270/469 (57.57%), Query Frame = 1
Query: 895 DVLMYRVETYLPAYFEHRDYTEIWIDATCEEAQAWDVETHERDMGEEGRVWVCVHAFKETLCKLPGHLRKRVTSKKTYPDGKRAILCFQDECIYRGNDDQRCSWIPPSFNGIKKKGEGVGIMISGTIVDNVGFVAGDQADIGKAQELRRERCRKAAE---AGGLAEPEKYRDI------------------------------------------------------------------C------------------------------------------------------------------KVKGLRQILFERGLLVDGMSKTRSKRGAKPNEALSMVAVLGKQKDFATVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKFWVRQHCKYTIQCLRENVSKSYVVEDDRLSLDIVQKYCRKVANYHWVYAEKHTGPNAVQKRREYRSHRKPAPSDFINP 1896
DVL YRVETYLPAYFEHRDYTEIWIDA+ EE ++W+VET RDM E+GRVWVCVHAF ETL + LR RVTSKK Y DG+RAI C+QDECIYR +D + +W PP +G+KKKGEG GIMISGTIV +VGFV G Q DI KAQ+LRRERCR + E AG PEKYRDI C KVKG++QILFERGL + GM+ + K+G +PN+ +SM AVL QKDFA VD SL VL+KR GGVA+MLPKFHCELNPIELVWGRSK+WVR++CKYTI CLRENVSKSY V + LSLDIVQK+CRKVAN+H VY TG AV+ + + +SHRKPAPS++INP
Sbjct: 201 DVLKYRVETYLPAYFEHRDYTEIWIDASMEEVRSWEVETQPRDMKEDGRVWVCVHAFAETLSEFHPDLRARVTSKKKYADGRRAIFCYQDECIYRAHDGESKAWWPPMMHGLKKKGEGQGIMISGTIVGDVGFVEGTQDDIDKAQDLRRERCRISEEKHAAGDHTRPEKYRDINMLYFEGEGDDRKFSTYYKFEYGKNKEGYWTGEKMIEHMADVLDLLAVKFPRHRPICFFDWSSCHDCVEEGAPSVTRMNAGYGGVRKGQEIAPQNATTILEDTPKLKVGAVQHLTFQQGEYPFYEPGATDHVGKVKGMKQILFERGLWIPGMTMSGGKKGQEPNKKMSMPAVLRAQKDFANVDSSLEVLLKRHGGVALMLPKFHCELNPIELVWGRSKWWVRRNCKYTIACLRENVSKSYGVHN--LSLDIVQKFCRKVANFHAVYDAGLTGAEAVEAQEKCKSHRKPAPSEYINP 667
BLAST of mRNA_C-linearis_contig79.15422.1 vs. uniprot
Match: A0A6H5JC29_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC29_9PHAE) HSP 1 Score: 384 bits (985), Expect = 7.560e-123 Identity = 207/342 (60.53%), Postives = 223/342 (65.20%), Query Frame = 1
Query: 832 KLGCQYRDPRSGLYFDGHDREDVLMYRVETYLPAYFEHRDYTEIWIDATCEEAQAWDVETHERDMGEEGRVWVCVHAFKETLCKLPGHLRKRVTSKKTYPDGKRAILCFQDECIYRGNDDQRCSWIPPSFNGIKKKGEGVGIMISGTIVDNVGFVAGDQADIGKAQELRRERCRKAAEAGGLAEPEKYRD--------------IC----------------------------------------------------------------------------KVKGLRQILFERGLLVDGMSKTRSKRGAKPNEALSMVAVLGKQKDFATVDPSLMVLVKRC 1587
+ G Q DP SGLYFDGHDR DVL YRVE YLP YFEH DYTE+WIDAT EEAQAW V THE++ GEEGRVWVCVHAF+ETLC L HLRKRVTSKK YP+GKRAI CFQDEC+YRGNDDQRCSW+PP+FNG+KKKGEG GIMISGTIVDNVGFVAG+Q+DI KAQELRR+RCRKAA A G+AEPEKYRD +C KVKGLRQILFERGLLVDGMSKT S RG+KP EALSMVAVLGKQ DF VDPSLMVLVKRC
Sbjct: 79 QAGVQIPDPWSGLYFDGHDRADVLKYRVEEYLPVYFEHLDYTEVWIDATWEEAQAWGVRTHEQNRGEEGRVWVCVHAFEETLCNLLEHLRKRVTSKKAYPEGKRAIFCFQDECMYRGNDDQRCSWVPPNFNGLKKKGEGAGIMISGTIVDNVGFVAGNQSDIDKAQELRRQRCRKAAVAEGVAEPEKYRDNSMLHEEASMFHTPVCFFDWSSCHDCVDKGSPSVTRMDLGYGGKRKSVDLDAQHPVEIQEDTPKLKKGQTQYLTFQPGEVPFYASDATDHVGKVKGLRQILFERGLLVDGMSKTGSTRGSKPIEALSMVAVLGKQLDFKNVDPSLMVLVKRC 420
BLAST of mRNA_C-linearis_contig79.15422.1 vs. uniprot
Match: A0A6H5KFI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI8_9PHAE) HSP 1 Score: 370 bits (949), Expect = 2.500e-117 Identity = 210/423 (49.65%), Postives = 253/423 (59.81%), Query Frame = 1
Query: 646 GEPNMTAQKFREYINKEIMPEIAATKTEEYNPFQHAPITKTTSDDG-VVTYSTSLSTATSWLHKLGCQYRDPRSGLYFDGHDREDVLMYRVETYLPAYFEHRDYTEIWIDATCEEAQAWDVETHERDMGEEGRVWVCVHAFKETLCKLPGHLRKRVTSKKTYPDGKRAILCFQDECIYRGNDDQRCSWIPPSFNGIKKKGEGVGIMISGTIVDNVGFVAGDQADIGKAQELRRERCRKAAE---AGGLAEPEKYRDICKVKGLRQILFERGLLVDGMSKTRSKRGAKPNEALSMVAVLGKQKDFATVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSK--FWVRQHCKYTIQCLRENVSKSYVVEDDRLSLDIVQKYCRKVANYHWVYAEKHTGPNAVQKRREYRSHRKPAPSDFINP 1896
GEPNMTAQ F +YINK I+PEIAATK Y+PF+HAP+TK + G VV+Y+ + STA SWLHKLGC YRD +SGLYFDGHDREDVL YRVETYLPAYFEHRDYTEIWIDA+ EE ++W+VET RDM E+GRVWVCVHAF ETL + LR RVTSKK Y DG+RAI C+QDECIYR +D + +W PP +G+KKKGEG GIMISGTIV +VGFV G Q DI KAQ+LRRERCR + E AG PEKYRDI +L+ G G + F+T + +G++K +W K+CRKVAN+H VY TG AV+ + + +SHRKPAPS++INP
Sbjct: 101 GEPNMTAQTFCDYINKVILPEIAATKANGYDPFKHAPVTKIKNAKGEVVSYAITESTARSWLHKLGCSYRDMQSGLYFDGHDREDVLKYRVETYLPAYFEHRDYTEIWIDASMEEVRSWEVETQPRDMKEDGRVWVCVHAFAETLSEFHPDLRARVTSKKKYADGRRAIFCYQDECIYRAHDGESKAWWPPMMHGLKKKGEGQGIMISGTIVGDVGFVEGTQDDIDKAQDLRRERCRISEEKHAAGDHTRPEKYRDI-------NMLYFEGE--------------------------GDDRKFSTY---------------------------YKFEYGKNKEGYWT--------------------------------KFCRKVANFHAVYDAGLTGAEAVEAQEKCKSHRKPAPSEYINP 431
BLAST of mRNA_C-linearis_contig79.15422.1 vs. uniprot
Match: A0A6H5JU25_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU25_9PHAE) HSP 1 Score: 369 bits (948), Expect = 1.790e-112 Identity = 181/264 (68.56%), Postives = 213/264 (80.68%), Query Frame = 1
Query: 634 STIKGEPNMTAQKFREYINKEIMPEIAATKTEEYNPFQHAPITKTT----SDDGVVTYSTSLSTATSWLHKLGCQYRDPRSGLYFDGHDREDVLMYRVETYLPAYFEHRDYTEIWIDATCEEAQAWDVETHERDMGEEGRVWVCVHAFKETLCKLPGHLRKRVTSKKTYPDGKRAILCFQDECIYRGNDDQRCSWIPPSFNGIKKKGEGVGIMISGTIVDNVGFVAGDQADIGKAQELRRERCRKAAE---AGGLAEPEKYRDI 1404
ST KGEPNMTA FREY+N I+PE+A TKT +Y+PF HAP+T TT S + VV+YS + TA SWL KLGC+YRD RSGLYFDGHDREDVL YRVE YLPAYFEHRDY EIWIDAT +EA++W+V+ E+D E+GRVWVCVHAFKETL +LP HLR+RVTSKKTY DG+RAI C+QDECIYR ND QR +W+PP+F+ +KKKG+G GIMISGTIVDNVGFVAGDQADI +A LRR+RC +A AG +PE+YR I
Sbjct: 361 STKKGEPNMTADSFREYLNTVILPEVAETKTADYDPFSHAPVTTTTHETASGERVVSYSVTDRTARSWLRKLGCEYRDRRSGLYFDGHDREDVLEYRVEKYLPAYFEHRDYMEIWIDATSDEARSWEVQVQEQDRQEDGRVWVCVHAFKETLSELPQHLRERVTSKKTYSDGRRAIFCYQDECIYRANDGQRYAWVPPNFHALKKKGDGQGIMISGTIVDNVGFVAGDQADIDEAHALRRKRCDTSAAKHAAGDPTKPERYRKI 624
BLAST of mRNA_C-linearis_contig79.15422.1 vs. uniprot
Match: A0A6H5KPN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN2_9PHAE) HSP 1 Score: 344 bits (883), Expect = 8.310e-110 Identity = 167/259 (64.48%), Postives = 208/259 (80.31%), Query Frame = 1
Query: 658 MTAQKFREYINKEIMPEIAATKTEEYNPFQHAPITKTTSDDGV----VTYSTSLSTATSWLHKLGCQYRDPRSGLYFDGHDREDVLMYRVETYLPAYFEHRDYTEIWIDATCEEAQAWDVETHERDMGEEGRVWVCVHAFKETLCKLPGHLRKRVTSKKTYPDGKRAILCFQDECIYRGNDDQRCSWIPPSFNGIKKKGEGVGIMISGTIVDNVGFVAGDQADIGKAQELRRERCRKAAE---AGGLAEPEKYRDICKV 1413
MTA+ F EY+NK ++P+ A TKT +YNPF+HAP+TKTT++ V+YS ++ TA SWLHKLGC+YRD +SGLYF+GHDREDVL YRVE YLPAYFEHRDY EIWI+AT +EA++W+V+ E+D E GRVWVCVHAFKETL +LP HL +RVTSKKTY +G+RAI C+QDECIYR ND QR +W+PP+++ +KKKG+G GIMISGTIVDNVGFVAG QADI +AQ LRR+ C +A AG +PE YR+I K+
Sbjct: 1 MTAEGFHEYLNKNVLPQAADTKTCDYNPFKHAPVTKTTTETASGEIGVSYSVTVCTARSWLHKLGCEYRDRKSGLYFNGHDREDVLAYRVEKYLPAYFEHRDYMEIWIEATSDEARSWEVQVQEQDRQEVGRVWVCVHAFKETLSELPQHLCERVTSKKTYSNGRRAIFCYQDECIYRANDGQRSAWVPPNYHALKKKGDGQGIMISGTIVDNVGFVAGGQADIDEAQALRRKWCDTSATEHAAGDPTKPETYRNIDKL 259
BLAST of mRNA_C-linearis_contig79.15422.1 vs. uniprot
Match: A0A6H5JUL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL0_9PHAE) HSP 1 Score: 348 bits (894), Expect = 7.200e-106 Identity = 211/496 (42.54%), Postives = 261/496 (52.62%), Query Frame = 1
Query: 634 STIKGEPNMTAQKFREYINKEIMPEIAATKTEEYNPFQHAPITKTTSDDGVVTYSTSLSTATSWLHKLGCQYRDPRSGLYFDGHDREDVLMYRVETYLPAYFEHRDYTEIWIDATCEEAQAWDVETHERDMGEEGRVWVCVHAFKETLCKLPGHLRKRVTSKKTYPDGKRAILCFQDECIYRGNDDQRCSWIPPSFNGIKKKGEGVGIMISGTIVDNVGFVAGDQAD------------------IGKAQELRRERC-------------------RKAAEAGG---------------LAEPEKYRD----------------------ICKVKGLRQILFERGLLVDGMSKTRSKRGA-KPNEALSMVAVLGKQKDFATVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKFWVRQHCKYTIQCLRENVSKSYVVEDDRLSLDIVQKYCRKVANYHWVYAEKHTGPNAVQKRREYRSHRKPAPSDFINP 1896
S GEPNMTA+ FREY+NK+++ P+SGLYFDG DREDVL YRVE YLPAYFEHRDY EIWI+AT +EA++W+V+ E+D E+GRVWV VHAFKETL +LP HLR+RVTSKKTY DG+RAILC+ DECIYR ND QR +W+PP+++ K+KG+ GIMISGTIVDNVG G D + + + C R A GG LA+ K + I K+KGL+Q+LFERGL MS K+G K + AL M LG Q+D A+V+PSL+V VKR GVAI+LPK+HCE+NPIELVWGRSK+WVRQHCK VAN++ VY + G AVQKR ++SHRKPAPS++INP
Sbjct: 280 SIKNGEPNMTAEGFREYLNKDVL---------------------------------------------------PQSGLYFDGRDREDVLAYRVEKYLPAYFEHRDYMEIWIEATSDEARSWEVQVQEQDRQEDGRVWVWVHAFKETLSELPQHLRERVTSKKTYSDGRRAILCYHDECIYRANDGQRFAWVPPNYHAFKRKGDSQGIMISGTIVDNVGVEYGKSMDGYRTGAKMVEHMADVLDLLAVKHPMHKPICFFDWSSCHDCVEDGAPSATRMNAGYGGVRKGKQLAAQDATTLLADTPKLKQGTVQYLTFQGESLFCDVGAEDYIGKLKGLKQVLFERGLWNADMSMKGIKKGQQKYDPALCMPVGLGTQEDLASVEPSLVVFVKRREGVAIILPKYHCEINPIELVWGRSKYWVRQHCK-------------------------------TVANFNGVYRDGLQGTEAVQKRDTFKSHRKPAPSEYINP 693
BLAST of mRNA_C-linearis_contig79.15422.1 vs. uniprot
Match: A0A6H5KNH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH0_9PHAE) HSP 1 Score: 328 bits (841), Expect = 1.190e-99 Identity = 195/437 (44.62%), Postives = 234/437 (53.55%), Query Frame = 1
Query: 931 AYFEHRDYTEIWIDATCEEAQAWDVETHERDMGEEGRVWVCVHAFKETLCKLPGHLRKRVTSKKTYPDGKRAILCFQDECIYRGNDDQRCSWIPPSFNGIKKKGEGVGIMISGTIVDNVGFVAGDQADIGKAQELRRERCRKAAE---AGGLAEPEKYRDI--------------------------------------------------------------C-------------------------------------------------KVKGLRQILFERGLLVDGMSKTRSKRGA-KPNEALSMVAVLGKQKDFATVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKFWVRQHCKYTIQCLRENVSKSYVVEDDRLSLDIVQKYCRKVANYHWVYAEKHTGPNAVQKRREYRSHRKPAPSDFINP 1896
AYFEHRDY EIWI+AT +EA++W+V+ E+D E+GRVWVCVHAFKETL + P HLR+RVTSKKTY DG+RAI C+QDEC YR ND QR +W+PP++ +KK+G+G GIMISGTIVDNVGFVAGDQADI KAQ LRR+RC A AG +PE YR+I C K+KGL+Q+LFERGL MS K+G K + AL M VLG Q+DFA+V+PSL+VLVKR GGVAIMLPKFHCE+NPIELVWGRSK+WVRQHCK VAN+ V + G AVQKR ++SHRKP PS++INP
Sbjct: 155 AYFEHRDYMEIWIEATTDEARSWEVQVQEKDRQEDGRVWVCVHAFKETLSEFPLHLRERVTSKKTYSDGRRAIFCYQDECTYRANDGQRFAWVPPNYYALKKQGDGQGIMISGTIVDNVGFVAGDQADIDKAQTLRRKRCDTWAPEHAAGDPTKPETYRNIDKLYKDEDGKFWTYYRFEYGKSRDGYWTGANLVEQMADVLDLLAVKYPKPICFFDWSSRHDYCIEDGAPSATRMNAGYGGDTPKLKKGTVQYLTFQEGESPFYDPGAEDYIGKLKGLKQVLFERGLWNADMSTKGIKKGQQKYDPALCMPVVLGTQEDFASVEPSLVVLVKRHGGVAIMLPKFHCEINPIELVWGRSKYWVRQHCK-------------------------------TVANFKEVNCDGLQGAEAVQKRDTFKSHRKPTPSEYINP 560
BLAST of mRNA_C-linearis_contig79.15422.1 vs. uniprot
Match: A0A6H5JFH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFH8_9PHAE) HSP 1 Score: 320 bits (820), Expect = 2.190e-99 Identity = 159/259 (61.39%), Postives = 196/259 (75.68%), Query Frame = 1
Query: 646 GEPNMTAQKFREYINKEIMPEIAATKTEEYNPFQHAPITKTTSDDGVVTYSTSLSTATSWLHKLGCQYRDPRSGLYFDGHDREDVLMYRVETYLPAYFEHRDYTEIWIDATCEEAQAWDVETHERDMGEEGRVWVCVHAFKETLCKLPGHLRKRVTSKKTYPDGKRAILCFQDECIYRGNDDQRCSWIPPSFNGIKKKGEGVGIMISGTIVDNVGFVAGDQADIGKAQELRRERCRKAAE---AGGLAEPEKYRDICKV 1413
GEPNMTA+ FREY+NK+++P+I VV+YS ++ TA SWL+KLG +Y D +SGLYF+GHDREDVL YRVE YLPAYFEHRDY EIWI+AT +EA++W+V+ E+D E+GRVWVCVHAFKETL +LP HLR+RVTSKKTY DG+RAI C+QDECIYR ND QR +W+PP+++ +KKKG+G GIMISGTIVDNVGFVA DQADI KAQ LRR+ C +A AG +PE YR+I K+
Sbjct: 31 GEPNMTAEGFREYLNKDVLPQI------------------------VVSYSVTVRTARSWLYKLGREYCDRKSGLYFNGHDREDVLAYRVEKYLPAYFEHRDYMEIWIEATSDEARSWEVQVQEQDRQEDGRVWVCVHAFKETLSELPQHLRERVTSKKTYSDGRRAIFCYQDECIYRANDGQRFAWVPPNYHALKKKGDGQGIMISGTIVDNVGFVASDQADIDKAQALRRKWCDTSATEHAAGDPTKPETYRNIDKL 265 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig79.15422.1 >prot_C-linearis_contig79.15422.1 ID=prot_C-linearis_contig79.15422.1|Name=mRNA_C-linearis_contig79.15422.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=415bp MTAQKFREYINKEIMPEIAATKTEEYNPFQHAPITKTTSDDGVVTYSTSLback to top mRNA from alignment at C-linearis_contig79:608160..611093+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig79.15422.1 ID=mRNA_C-linearis_contig79.15422.1|Name=mRNA_C-linearis_contig79.15422.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2934bp|location=Sequence derived from alignment at C-linearis_contig79:608160..611093+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig79:608160..611093+ >mRNA_C-linearis_contig79.15422.1 ID=mRNA_C-linearis_contig79.15422.1|Name=mRNA_C-linearis_contig79.15422.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2490bp|location=Sequence derived from alignment at C-linearis_contig79:608160..611093+ (Chordaria linearis ClinC8C monoicous)back to top |