mRNA_C-linearis_contig79.15412.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig79.15412.1
Unique NamemRNA_C-linearis_contig79.15412.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig79.15412.1 vs. uniprot
Match: D8LJF5_ECTSI (Importin subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJF5_ECTSI)

HSP 1 Score: 832 bits (2148), Expect = 8.320e-300
Identity = 539/558 (96.59%), Postives = 544/558 (97.49%), Query Frame = 1 
Query:    1 MASYMGKDKEAERAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKGSAGDALGGFSFATIPEGGAPAAGTGAAAVDTPAHMRLDQLPQLVIGVQSSDPAVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHSSPAVQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEMNQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDNGIAPVETEGAQQFAFGQPAQPGADATFGAQPAQGGFNFG 1674
            MASYMGKDKEAERAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKG+AGD LG FSFATIPEGGAPAAGT A  VDTPAHMRLDQLPQLVIGVQS DP+VQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIH+SPAVQTPALRTVGNI  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQE+NQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDNGIAP+E EGAQQFAFGQP Q G D TFGAQP QGGFNFG
Sbjct:    1 MASYMGKDKEAERAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKGAAGDTLGAFSFATIPEGGAPAAGTNA--VDTPAHMRLDQLPQLVIGVQSLDPSVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEINQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDNGIAPLEAEGAQQFAFGQPTQAGTDTTFGAQPNQGGFNFG 556
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BLAST of mRNA_C-linearis_contig79.15412.1 vs. uniprot
Match: A0A835Z4P4_9STRA (Importin subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4P4_9STRA)

HSP 1 Score: 556 bits (1432), Expect = 2.820e-191
Identity = 414/549 (75.41%), Postives = 451/549 (82.15%), Query Frame = 1 
Query:   34 ERAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKGSAGDALGGFSFATIPEGGAPAAGTGAAAVDTPAHMRLDQLPQLVIGVQSSDPAVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHSSPAVQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEMNQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDNGIAPVETEGAQQFAFGQPAQPGAD-ATFGA-QPAQGGFNFG 1674
            ER K +K GV +D+ARR R ETQ+Q+RK KK+ERLNQRR+ G +   +G F       GGAP+       VD     RL+QLPQLV G+ S+DPA+ LD TTAFRK+LSIERNPPIQ VIDAGVVP+FVEFLQ+D NPALQFE+AWALTNIASGTS+HTRVVIE GAVPIFVRLL SPNDDVREQ  XXXXXXXXDSP CRD VLQ G+M PLL QLT+RSKLSMLRNATWTLSNFCRGKPQP FE VRPALP LAQLIHSVDEEVLTDACWALSYLSDG NDKIQAVIEAGVCQRLVELL+H SP+VQTPALRTVGNI  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GK EQIK+              +V DAKIVTVALEGLENILK G+T+AKAQG + N MATYI E GGM++IE LQMHDN +IYNKALK+L +YFG EDEED  +AP  T+GA  F+FGQP   GA  A FG  QP QG +NFG
Sbjct:   10 ERKKAYKKGVSQDDARRRREETQIQVRKTKKDERLNQRRKMGPS--TVGAF-------GGAPS-------VDPNIAQRLEQLPQLVAGLMSADPALHLDMTTAFRKLLSIERNPPIQQVIDAGVVPRFVEFLQQDANPALQFEAAWALTNIASGTSEHTRVVIEVGAVPIFVRLLSSPNDDVREQXXXXXXXXXXDSPECRDGVLQHGSMQPLLAQLTERSKLSMLRNATWTLSNFCRGKPQPDFERVRPALPALAQLIHSVDEEVLTDACWALSYLSDGSNDKIQAVIEAGVCQRLVELLMHQSPSVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGKNEQIKFXXXXXXXXXXXXXXQVQDAKIVTVALEGLENILKVGETDAKAQGTDQNMMATYIAEAGGMDKIENLQMHDNLSIYNKALKILTKYFGAEDEEDAALAPA-TDGAT-FSFGQPPAGGAGGAAFGGNQPVQG-YNFG 539
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BLAST of mRNA_C-linearis_contig79.15412.1 vs. uniprot
Match: A0A830HJH5_9CHLO (Importin subunit alpha n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HJH5_9CHLO)

HSP 1 Score: 475 bits (1222), Expect = 2.780e-159
Identity = 328/550 (59.64%), Postives = 383/550 (69.64%), Query Frame = 1 
Query:   37 RAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKGSA---GDALGGFSFATIPEGGAPAAGTGAAAVDTPAHMRLDQLPQLVIGVQSSDPAVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHSSPAVQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGK-PEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEMNQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDNGIAPVETEGAQQFAFGQPAQPGADATFGAQPAQGGFNFG 1674
            R K FK  +  +E+RR R ++ VQIRK+K+EE L ++R   S    G A G  S +++   G PA   G  A       +L+ LP++V GV S DP VQL++T  FRK+LSIER+PPI+ VI AGVVP+ V FLQR D P LQFE+AWALTNIASGTS+HTRVVIE  AVPIFV+LL SP+DDVREQAV        DSP CRDLVL  GA+ PLL QL + +K+SMLRNATWTLSNFCRGKPQP+FE  RPALP LA+LIHS DEEVLTDACWALSYLSDG NDKIQAVI+AGV +RLVELL+H+S AV  PALRTVGNIVT                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXX   PEQIK+LV+ GCI PL DLL   D +IVTVALEGLENIL+ G+ + +A   + N     I + GG++ IEQLQ H NN+IY+K +KLLE Y G+E+EED  +AP   EGA Q+ FG PA  GA    G+ PA GGFNFG
Sbjct:   13 RKKGFKKSIDVEESRRKREDSFVQIRKDKREESLQKKRVTMSETMFGGAPGDVSESSV-RAGDPAGAAGGTA-------KLESLPEMVQGVCSEDPKVQLESTMQFRKLLSIERSPPIEAVIKAGVVPRLVAFLQRVDLPQLQFEAAWALTNIASGTSEHTRVVIEYNAVPIFVQLLQSPSDDVREQAVWALGNIAGDSPKCRDLVLGHGALFPLLSQLNEHAKISMLRNATWTLSNFCRGKPQPNFEQARPALPALAKLIHSTDEEVLTDACWALSYLSDGTNDKIQAVIDAGVARRLVELLLHNSAAVLIPALRTVGNIVTGDDVQTQIVINCQALPCLLNLLQQGHKKSIKKEACWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEFDXXXXXXXXXXXXXXXXTPEQIKFLVSSGCIKPLCDLLTCGDNRIVTVALEGLENILRIGEEDKRAGIMDQNPFVQEIDQVGGLDLIEQLQNHPNNDIYDKCVKLLETYIGLEEEEDQNLAPSMDEGANQYTFGAPAAAGAPV-MGSMPA-GGFNFG 552
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BLAST of mRNA_C-linearis_contig79.15412.1 vs. uniprot
Match: A0A7S2P4N2_9STRA (Importin subunit alpha n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P4N2_9STRA)

HSP 1 Score: 471 bits (1213), Expect = 3.510e-158
Identity = 367/542 (67.71%), Postives = 405/542 (74.72%), Query Frame = 1 
Query:   25 KEAERAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKGSAGDALGGFSFA---TIPEGGAPAAGTGAAAVDTPAHMRLDQLPQLVIGVQSSDPAVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHSSPAVQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEMNQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDNGIAPVETEGAQQFAFGQPAQPGADATFG 1641
            KE ER   +K  +  ++ARR R+ET +QIRK KK+  LN+RR+  S    L           P   A A G G A+       +L+ LPQ+V GV  +DPA Q + TTAFR++LSIE+NPPIQ VID+GVVP+FVEFLQRDDNPALQFE+AWALTNIASGTS+HT VV+E GAVPIF RLLMSPNDDVREQAV        DSP CRDLVL   AM PLLQQL   SKLSMLRNATWTLSNFCRGKPQP+FE VRPALPTLAQLI S DEEVLTDACWALSYLSDG N+KIQAVIEAGVC+RLVE                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG   QIK+LV +GCI PL DLL V+DAKIV VALEGLENILK G+ +AK  G   NQMATYI E  G+ +IE LQ HDNN+IY K +K+LE YFGVEDEED  +AP   EG Q +AFG     G    FG
Sbjct:    4 KENERKATYKKTIDSEDARRRRTETTIQIRKTKKDAHLNKRRQMPSVTTPLAEAHVVDGNNAPLVSAVAFGNGNAS-------KLENLPQMVNGVMGNDPAQQTECTTAFRRLLSIEKNPPIQQVIDSGVVPRFVEFLQRDDNPALQFEAAWALTNIASGTSEHTGVVMEMGAVPIFCRLLMSPNDDVREQAVWALGNIAGDSPPCRDLVLNADAMLPLLQQLHQNSKLSMLRNATWTLSNFCRGKPQPNFEMVRPALPTLAQLIFSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCRRLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNTTQIKFLVQQGCIRPLCDLLTVNDAKIVHVALEGLENILKVGEADAKVSGTH-NQMATYIAEAEGLNKIENLQQHDNNDIYEKCIKILETYFGVEDEEDPDLAPQMGEGGQSYAFGAGQMQGQQFDFG 537
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BLAST of mRNA_C-linearis_contig79.15412.1 vs. uniprot
Match: A0A7S0X4A9_9CHLO (Importin subunit alpha n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X4A9_9CHLO)

HSP 1 Score: 459 bits (1180), Expect = 2.410e-153
Identity = 312/548 (56.93%), Postives = 371/548 (67.70%), Query Frame = 1 
Query:   37 RAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKGSAGDALGGFSFATIPEGGAPAAGTGAAAVDTPAHMRLDQLPQLVIGVQSSDPAVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHSSPAVQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEMNQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDNGIAPVETEGAQQFAF-GQPAQPGADATFGAQPAQGGFNFG 1674
            R K FK  +  +EARR R E  +QIRK+K+EE + ++RR G+ G++        +P  G+  A             +L+ LPQ+V GV++ DP VQL+ TT FRK+LSIER PPI+ VI AGVVP FV FL+R++ P LQFE+AWALTNIASGTS++T VVI+ GAVPIFV LL SP+DDVREQAV        DSP CRD+VL Q A+ PLL+QL + SKL+MLRNATWTLSNFCRGKPQP F+ +R ALP LA+L+HS DEEVLTDACWALSYLSDG NDKIQAVIEAGVC+RLVELL    P+V  PALRTVGNIVT                                    XXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXXX G  +Q+KYLV +GCI PL DL+   DA+IVTVALEGLENILK G+ + K +G   NQ A +I E  G+E+I   Q H+NN+IY+KA+K+LE YFG+EDEED  +AP     A QFAF   P  P           QGGF+FG
Sbjct:   11 RKKSFKKSIDPEEARRKREEGMIQIRKDKREEAVQKKRRDGNPGES----DSTALPNSGSVLA-------------KLESLPQMVQGVKTDDPRVQLEATTQFRKLLSIERAPPIEEVIKAGVVPYFVAFLKREEFPQLQFEAAWALTNIASGTSENTGVVIDSGAVPIFVTLLRSPSDDVREQAVWALGNIAGDSPKCRDMVLAQNALHPLLEQLNEHSKLTMLRNATWTLSNFCRGKPQPQFDQLRDALPALARLVHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCRRLVELLGSKHPSVLIPALRTVGNIVTGDDYQTQIIINCRALPSLLALLTAEHKKSIKKEACWXXXXXXXXXXXXXXXXXXXXXXXXXXYLLANAEFDXXXXXXXXXXXXXXXGTHQQLKYLVDQGCIKPLCDLIVCSDARIVTVALEGLENILKVGEVD-KVEGSP-NQYAQFIDEAEGLEKIXXXQNHNNNDIYDKAMKILEEYFGLEDEEDQNLAPAMDANANQFAFQAAPMVP-----------QGGFDFG 528
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BLAST of mRNA_C-linearis_contig79.15412.1 vs. uniprot
Match: A0A8K1FCP4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCP4_PYTOL)

HSP 1 Score: 459 bits (1180), Expect = 2.570e-153
Identity = 331/527 (62.81%), Postives = 381/527 (72.30%), Query Frame = 1 
Query:   25 KEAERAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKGSAGDALGGFSFATIPEGGAPAAGTGAAAVDTPAHMRLDQLPQLVIGVQSSDPAVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHSSPAVQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEMNQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDNGIAPVETEGAQQFAFG 1605
            K  ER   FK  +  DE RR RSET VQIRK  KE+RLNQRRR G A D +G      +  GGA  AG     ++     RL +LP +V GV +++  VQLD  T FRK+LSIERNPPI+ VI  GVVP FV+FLQRDD P LQFE+AWALTNIASGTSD T VVI  GAVPIFV+LL+S NDDVREQAV        DS  CRD+VL+ GA+ PLL QLT+ +K +MLRNATWTLSNFCRG+PQP FE V+PALPTL QLI++ DEEVLTDACWALSYLSDG N+KIQAVIEAGVC+R+VELL+H SP+VQTPALRT+GNIVT                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG  EQI YLV +GCI PL DLL   DAK+V VALEGLEN+L+ G+ + K  G E N MAT + E  G+ +I+ LQ H N +IY K+LK++E YF  E+E +  +AP     AQQF FG
Sbjct:    7 KAPERKNYFKKTIDADEIRRRRSETTVQIRKTVKEDRLNQRRRMGGA-DGMG-----MVAAGGA--AGEN---LEMSLSQRLSELPLMVQGVHATEREVQLDAVTKFRKLLSIERNPPIKEVISTGVVPIFVQFLQRDDFPELQFEAAWALTNIASGTSDDTAVVINHGAVPIFVKLLLSTNDDVREQAVWALGNIAGDSVECRDMVLRCGALRPLLGQLTENAKPTMLRNATWTLSNFCRGRPQPQFELVQPALPTLGQLIYTNDEEVLTDACWALSYLSDGTNEKIQAVIEAGVCRRIVELLMHHSPSVQTPALRTIGNIVTGDDLQTQVIINLQALPCLRALLDSPKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAEQIMYLVEQGCIKPLCDLLAASDAKVVIVALEGLENVLRVGEGQ-KGVG-EFNPMATLVDEAEGVPKIQALQFHANEDIYQKSLKIVETYFQGEEEVEQPLAPTVDASAQQFTFG 520
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BLAST of mRNA_C-linearis_contig79.15412.1 vs. uniprot
Match: C1MLU3_MICPC (Importin subunit alpha n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MLU3_MICPC)

HSP 1 Score: 457 bits (1176), Expect = 9.660e-153
Identity = 326/549 (59.38%), Postives = 377/549 (68.67%), Query Frame = 1 
Query:   37 RAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRR--KGSAGDALGGFSFATIPEGGAPAAGTGAAAVDTPAHMRLDQLPQLVIGVQSSDPAVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHSSPAVQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKP-EQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEMNQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDNGIAPVETEGAQQFAFG-QPAQPGADATFGAQPAQGGFNF 1671
            R K FK     DEARR R E  +QIRK+K+EE + ++RR   G    A+G  S AT                   +  RL+ LP +  GV+S DPA QL+ TT FRK+LSIER PPI+ VI AGVVP FVEFL+R++ P LQFE+AWALTNIASGTS++T VVI+ GAVPIFV LL SP+DDVREQAVXXXXXXX DSP CRD+VL   A+GPLL+QL + SKL+MLRNATWTLSNFCRGKPQP F+ +R ALP LA+L+HS DEEVLTDACWALSYLSDG NDKIQAVIEAGVC+RLVELL   +P+V  PALRTVGNIVT                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXX    +QIKYLV +G I PL DL+   DA+IVTVALEGLENILK G+   K +G   NQ A +I E  G+E+IE LQ H+NN+IY+KA+K+LE YFG+EDEED  +AP     A QFAF  QPA P           QGGF+F
Sbjct:   11 RKKGFKKATDADEARRKREEGMIQIRKDKREEAMLKKRRFADGMGVTAVGEDSSATT------------------SVARLEMLPTMCEGVRSQDPAAQLEATTQFRKLLSIERAPPIEEVIRAGVVPYFVEFLKREEFPQLQFEAAWALTNIASGTSENTGVVIDSGAVPIFVALLRSPSDDVREQAVXXXXXXXGDSPKCRDMVLSTNALGPLLEQLNEHSKLTMLRNATWTLSNFCRGKPQPQFDQLRDALPALARLVHSSDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCRRLVELLGRPTPSVLIPALRTVGNIVTGDDYQTQIIINCRALPSLLALLTTDHKKSIKKEACWXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQHAEFDXXXXXXXXXXXXXXXXTHQQIKYLVEQGAIKPLCDLIVCSDARIVTVALEGLENILKVGEA-MKTEGSP-NQFAQFIDEADGLEKIENLQNHNNNDIYDKAMKILEEYFGLEDEEDQNLAPAADANAAQFAFNPQPAAP-----------QGGFDF 528
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BLAST of mRNA_C-linearis_contig79.15412.1 vs. uniprot
Match: A0A7S0CK65_9STRA (Importin subunit alpha n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CK65_9STRA)

HSP 1 Score: 457 bits (1175), Expect = 1.960e-152
Identity = 365/557 (65.53%), Postives = 404/557 (72.53%), Query Frame = 1 
Query:   31 AERAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKGSAGDALGGFSFATIPEGGAPAAG-----------------TGAAAVDTPAHMRLDQLPQLVIGVQSSDPAVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHSSPAVQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEMNQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDN-GIAPVETEGAQQFAFGQPAQPGADATFGAQ 1647
            ++R K FK  +  DE RR R ET +QIRK KK+  LN+RR+               IP   AP AG                  G  A    A  +L+ LPQ+V GV + D   Q + TT FR++LSIE+NPPIQ VIDAGVVP+FVEFLQRDDNPALQFE+AWALTNIASGTS+HT VV+E GAVPIF RLL+SPNDDVREQA XXXXXXX DSP CRDLVL  GAM PLLQQL   SKLSMLRNATWTLSNFCRGKPQP F  VRPALPTLAQLI S DEEVLTDACWALSYLSDG N+KIQAVIEAGVC+RLVE                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    G  EQIK+LV +GCI PL DLL V D KIVT+ALEGLENILK G+ ++++   E NQMAT+I E  G+ +IEQLQ HDNN+IY K +K+LE YFGVEDEE+  G+AP   E  + FAFG  A  G    F  Q
Sbjct:    4 SQRKKAFKKTIDVDENRRRREETTLQIRKTKKDAHLNKRRQ---------------IPANFAPEAGDSSLTNGMDMMDSQNMQVGGTAAPMTATSKLENLPQMVQGVMTDDAQQQTECTTQFRRLLSIEKNPPIQQVIDAGVVPRFVEFLQRDDNPALQFEAAWALTNIASGTSEHTAVVMESGAVPIFCRLLLSPNDDVREQAXXXXXXXXGDSPPCRDLVLMAGAMQPLLQQLHQNSKLSMLRNATWTLSNFCRGKPQPDFNMVRPALPTLAQLIFSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCRRLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSGGNAEQIKFLVQQGCIRPLCDLLTVADTKIVTIALEGLENILKVGENDSQSSN-EHNQMATFIAEADGLTKIEQLQQHDNNDIYEKCVKILETYFGVEDEEEMPGLAPATAESGETFAFG--ADSGQQFDFSGQ 542
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BLAST of mRNA_C-linearis_contig79.15412.1 vs. uniprot
Match: K3X3Z2_GLOUD (Importin subunit alpha n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3Z2_GLOUD)

HSP 1 Score: 456 bits (1173), Expect = 2.740e-152
Identity = 358/533 (67.17%), Postives = 406/533 (76.17%), Query Frame = 1 
Query:   25 KEAERAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKGSAGDALGGFSFATIPEGGAPAAGTGAAAVDTPAHMRLDQLPQLVIGVQSSDPAVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHSSPAVQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEMNQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDNGIAPVETEGAQQFAFGQ-PAQP 1620
            K  ER   FK  +  DE RR RSET VQIRK  KE+R+NQRRR G    A   F+  T   G  P         D     RL +LP +V GVQS+DPA QL+  T FRK+LSIERNPPI+ VI+ GVVP FV+FLQR+D P LQFE+AWALTNIASGTS  T VVI  GAVPIFV LL+S NDDVREQAV        DS  CRD+VL+ G + PL+QQL+  SK +MLRNATWTLSNFCRGKPQP FE V PALPTL QLI + DEEVLTDACWALSYLSDG N+KIQAVIEAGVC+R+VELL+H SP+VQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG PEQI +LV  GCI PL DLLEV DAK+V VALEGLENIL+ G+ +      E+N++AT I E  G+ +I+ LQ H N +IY K++K++E YF  E++ ++ + P   E A QF FG   AQP
Sbjct:    7 KAPERKNFFKKTLDADEIRRRRSETTVQIRKTIKEDRMNQRRRMG----ADTAFAEETSMGGETPG--------DLTLAQRLAELPLMVQGVQSADPATQLEAVTKFRKLLSIERNPPIKEVIETGVVPLFVQFLQREDYPTLQFEAAWALTNIASGTSADTEVVINHGAVPIFVELLLSTNDDVREQAVWALGNIAGDSIECRDMVLRCGGLRPLMQQLSQNSKPTMLRNATWTLSNFCRGKPQPQFELVSPALPTLGQLIFTQDEEVLTDACWALSYLSDGSNEKIQAVIEAGVCRRVVELLMHPSPSVQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPEQIMHLVQLGCIKPLCDLLEVKDAKVVIVALEGLENILRVGEQQKTG---ELNEIATLIDEVDGVNKIQALQYHANEDIYVKSMKIVELYFQGEEDAEDSLVPDTDESAGQFQFGTGSAQP 524
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BLAST of mRNA_C-linearis_contig79.15412.1 vs. uniprot
Match: A0A7S0D3V3_MICPS (Importin subunit alpha n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D3V3_MICPS)

HSP 1 Score: 455 bits (1171), Expect = 5.480e-152
Identity = 316/547 (57.77%), Postives = 366/547 (66.91%), Query Frame = 1 
Query:   37 RAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKGSAGDALGGFSFATIPEGGAPAAGTGAAAVDTPAHMRLDQLPQLVIGVQSSDPAVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHSSPAVQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEMNQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDNGIAPVETEGAQQFAFGQPAQPGADATFGAQPAQGGFNFG 1674
            R K FK     DEARR R E  +QIRK+K+E    ++RR G+   A  G S A    GG                 +L+ LPQ+V GVQS +  +QL+ TT FRK+LSIER PPI+ VI AGVVP FVEFL+R++ P LQFE+AWALTNIASGTS++T VVI+ GAVPIFV+LL SP+DDVREQAV        DSP CRD+VL   ++ PLLQQL   SKL+MLRNATWTLSNFCRGKPQP F+ +R ALP LA+L+HS DEEVLTDACWALSYLSDG NDKIQAVIEAGVC+RLVELL     +V  PALRTVGNIVT                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXX G  EQI YLV +G I PL DL+   DA+IVTVALEGLENILK G+   +A G   NQ A +I E  G+E+IE LQ H+NN+IY+KA+K++E YFG+EDEED  +AP     A QFAF QPA P            GGF+FG
Sbjct:   11 RKKGFKKATDADEARRKREEGMIQIRKDKREXXXXKKRRDGAGALAAAGDSSALTGSGGTA---------------KLESLPQMVQGVQSDNAQMQLEATTQFRKLLSIERAPPIEEVIRAGVVPYFVEFLKREEFPQLQFEAAWALTNIASGTSENTGVVIDSGAVPIFVQLLRSPSDDVREQAVWALGNIAGDSPKCRDMVLATNSLIPLLQQLNAESKLTMLRNATWTLSNFCRGKPQPQFDQLRDALPVLARLVHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCRRLVELLSSKHASVLIPALRTVGNIVTGDDYQTQIIINCQALPSLLALLTGDHKKSIKKEACWXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAHAEFDXXXXXXXXXXXXXXXGTHEQISYLVAQGAIKPLCDLIVCSDARIVTVALEGLENILKVGEA-LRADGAP-NQYAQFIDEAEGLEKIENLQNHNNNDIYDKAVKIMEEYFGLEDEEDQNLAPALDASANQFAFNQPAAP-----------TGGFDFG 529
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJF5_ECTSI8.320e-30096.59Importin subunit alpha n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835Z4P4_9STRA2.820e-19175.41Importin subunit alpha n=1 Tax=Tribonema minus Tax... [more]
A0A830HJH5_9CHLO2.780e-15959.64Importin subunit alpha n=2 Tax=Pycnococcus provaso... [more]
A0A7S2P4N2_9STRA3.510e-15867.71Importin subunit alpha n=1 Tax=Leptocylindrus dani... [more]
A0A7S0X4A9_9CHLO2.410e-15356.93Importin subunit alpha n=1 Tax=Mantoniella antarct... [more]
A0A8K1FCP4_PYTOL2.570e-15362.81Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
C1MLU3_MICPC9.660e-15359.38Importin subunit alpha n=1 Tax=Micromonas pusilla ... [more]
A0A7S0CK65_9STRA1.960e-15265.53Importin subunit alpha n=1 Tax=Proboscia inermis T... [more]
K3X3Z2_GLOUD2.740e-15267.17Importin subunit alpha n=1 Tax=Globisporangium ult... [more]
A0A7S0D3V3_MICPS5.480e-15257.77Importin subunit alpha n=1 Tax=Micromonas pusilla ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig79contigC-linearis_contig79:397846..403048 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score837.8
Seed ortholog evalue3e-240
Seed eggNOG ortholog2880.D8LJF5
Preferred nameKPNA6
KEGG koko:K15042,ko:K15043
KEGG Pathwayko05164,map05164
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000166,GO:0000737,GO:0001882,GO:0001883,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005730,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0005911,GO:0006139,GO:0006259,GO:0006308,GO:0006309,GO:0006355,GO:0006357,GO:0006605,GO:0006606,GO:0006607,GO:0006612,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006915,GO:0006921,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0007267,GO:0007276,GO:0007283,GO:0007565,GO:0008104,GO:0008139,GO:0008150,GO:0008152,GO:0008219,GO:0008565,GO:0009056,GO:0009057,GO:0009506,GO:0009605,GO:0009607,GO:0009608,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0012501,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0017038,GO:0017076,GO:0019001,GO:0019048,GO:0019054,GO:0019058,GO:0019219,GO:0019222,GO:0019439,GO:0019953,GO:0022411,GO:0022414,GO:0023052,GO:0030054,GO:0030262,GO:0030312,GO:0030425,GO:0030581,GO:0031144,GO:0031224,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031503,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032504,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0034629,GO:0034641,GO:0034655,GO:0035639,GO:0035821,GO:0036094,GO:0036477,GO:0042277,GO:0042886,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044003,GO:0044068,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0044766,GO:0045184,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046700,GO:0046794,GO:0046907,GO:0048232,GO:0048518,GO:0048522,GO:0048609,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051233,GO:0051234,GO:0051252,GO:0051254,GO:0051641,GO:0051649,GO:0051701,GO:0051704,GO:0051707,GO:0051708,GO:0051716,GO:0051817,GO:0055044,GO:0060135,GO:0060255,GO:0061608,GO:0065007,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072594,GO:0072657,GO:0072686,GO:0075733,GO:0080034,GO:0080090,GO:0090150,GO:0090304,GO:0090305,GO:0097159,GO:0097194,GO:0097367,GO:0097447,GO:0097458,GO:0098926,GO:0099527,GO:0099536,GO:0120025,GO:0120038,GO:0140104,GO:0140142,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902579,GO:1902581,GO:1902583,GO:1902680,GO:1903506,GO:1903508,GO:1990023,GO:2000112,GO:2001141
EggNOG free text desc.nuclear import signal receptor activity
EggNOG OGsCOG5064@1,KOG0166@2759
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-06_010020.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036
Exons8
Model size1677
Cds size1677
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig79.15412.1prot_C-linearis_contig79.15412.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig79 397846..403048 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930494.9805162-CDS-C-linearis_contig79:397845..3978811622930494.9805162-CDS-C-linearis_contig79:397845..397881Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 397846..397881 +
1690881098.8982148-CDS-C-linearis_contig79:397845..3978811690881098.8982148-CDS-C-linearis_contig79:397845..397881Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 397846..397881 +
1622930494.99918-CDS-C-linearis_contig79:399114..3993451622930494.99918-CDS-C-linearis_contig79:399114..399345Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 399115..399345 +
1690881098.910165-CDS-C-linearis_contig79:399114..3993451690881098.910165-CDS-C-linearis_contig79:399114..399345Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 399115..399345 +
1622930495.0137131-CDS-C-linearis_contig79:399963..4000601622930495.0137131-CDS-C-linearis_contig79:399963..400060Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 399964..400060 +
1690881098.92284-CDS-C-linearis_contig79:399963..4000601690881098.92284-CDS-C-linearis_contig79:399963..400060Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 399964..400060 +
1622930495.0286188-CDS-C-linearis_contig79:400417..4006441622930495.0286188-CDS-C-linearis_contig79:400417..400644Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 400418..400644 +
1690881098.933446-CDS-C-linearis_contig79:400417..4006441690881098.933446-CDS-C-linearis_contig79:400417..400644Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 400418..400644 +
1622930495.0467467-CDS-C-linearis_contig79:400949..4011861622930495.0467467-CDS-C-linearis_contig79:400949..401186Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 400950..401186 +
1690881098.9445198-CDS-C-linearis_contig79:400949..4011861690881098.9445198-CDS-C-linearis_contig79:400949..401186Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 400950..401186 +
1622930495.0653334-CDS-C-linearis_contig79:401529..4019161622930495.0653334-CDS-C-linearis_contig79:401529..401916Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 401530..401916 +
1690881098.9591315-CDS-C-linearis_contig79:401529..4019161690881098.9591315-CDS-C-linearis_contig79:401529..401916Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 401530..401916 +
1622930495.0894725-CDS-C-linearis_contig79:402265..4024271622930495.0894725-CDS-C-linearis_contig79:402265..402427Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 402266..402427 +
1690881098.9697084-CDS-C-linearis_contig79:402265..4024271690881098.9697084-CDS-C-linearis_contig79:402265..402427Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 402266..402427 +
1622930495.1095386-CDS-C-linearis_contig79:402748..4030481622930495.1095386-CDS-C-linearis_contig79:402748..403048Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 402749..403048 +
1690881098.9801238-CDS-C-linearis_contig79:402748..4030481690881098.9801238-CDS-C-linearis_contig79:402748..403048Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 402749..403048 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig79.15412.1

>prot_C-linearis_contig79.15412.1 ID=prot_C-linearis_contig79.15412.1|Name=mRNA_C-linearis_contig79.15412.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=559bp
MASYMGKDKEAERAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRR
RKGSAGDALGGFSFATIPEGGAPAAGTGAAAVDTPAHMRLDQLPQLVIGV
QSSDPAVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPA
LQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVWA
LGNIAGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRG
KPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVI
EAGVCQRLVELLIHSSPAVQTPALRTVGNIVTGDDLQTQVIINFNALPWL
LNLLSSSKKGIRKEACWTISNITAGNKEQIQAVIEANIIPPLIQLLSNAE
FDIRKEAAWAISNATSGGKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVA
LEGLENILKTGDTEAKAQGQEMNQMATYIMECGGMERIEQLQMHDNNNIY
NKALKLLERYFGVEDEEDNGIAPVETEGAQQFAFGQPAQPGADATFGAQP
AQGGFNFG*
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mRNA from alignment at C-linearis_contig79:397846..403048+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig79.15412.1 ID=mRNA_C-linearis_contig79.15412.1|Name=mRNA_C-linearis_contig79.15412.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5203bp|location=Sequence derived from alignment at C-linearis_contig79:397846..403048+ (Chordaria linearis ClinC8C monoicous)
ATGGCGAGCTACATGGGCAAGGACAAGGAGGCTGAGGTGAGAGAGAGATT
TTGTGTGTCAGCCCCTCTCTAGTCCGTGGTGAAGAGCTTCAATAGTTCTC
GCCCCTCGCCTTGGTGGCGAGTGGAAAGAGTTGTCGGTGTTGGGGACTCG
CCAACCGCGTGCACTCTTGGCATGTGTTGCTTCCACGGTGGCCCGTGTGA
AGCTGTGACCTGTACGTTATTTTTGGTGTCTTGTGTGTACAGCAGTAGGC
TCCTTCCTGGGTGTGTATGCCATGGTTTTTCAAAGGGGCTCGTTGTGAAG
GCTTTCAACAACTCTCTCCGACGCCGGCGGAGTCGTTAGCCAGCAATGGC
CTTGGGCTTCTGAAGGAGATCATTCTATGCCGTGGCTCCCTGGCTGGCCC
AGCCGCTTGCGCCGGCGCTGACTGCCCCGCGGGCTCTCGTGTGTCGGCGT
TCCCGCTCTTGCTGCCTGCCTTTCAAATTGTTTTCGCTGTGGAGGCAAAT
CGTCGTGAGAGCAGCTCTCCTTTTTCGGACAGATGTCAGATGGGCTAACG
ACGTAGCGCCCAGCGCCCGCGATTTTCGATCGGGGGTTAGTGGAGATTCC
TATCAGGGTGTTTGATGTCCAGCCTTTAAATTATTCAAGGGAGTAGGGAG
CCCAAATATGCACGCACGAGCAGGTTATTATGGGAACAGTTTCAATTTTG
GCGAATCCTGGCCTGCAGCACACCACTCAAAACTCAACCGGTCTGTCTGT
GGTCTATCCTGTGCTTCGCCTACGTTGTACTACCCTCAGCCTCCACTCGA
TGGAGGCCGCTATTAATTTCTGTGCGGCTGGAACGCCCACCAGCGCGTCT
CCAGCCAGATTAGGAGAAATAAACCGACCTCTCGATATGCCCCAGATCCC
TCAAAATGGGCAAGTTGTCGCTGTCTCTCGCTTTTCCCTTCTCCCATTGG
TACTTTCGTTTCCAAACCCCACCCAAGTGGATTGTCTTGCTGAAATTGGC
GTCCTCCAACTACGGCACAACGCCGCGCCATTCCTACGTAGACGTCACGT
ATTAGCCCCGATCTCATTTGACGCCGCTCCAGTGACGCCAAAAGCCGGAT
ACATGGCATATGGTGATGAAGAGTCGGAAAAATTTGACGGCGTGTCTGCG
ATGGTCATCTCCCCTTTCATGCTGGTCGCTAATTTCTAATTTTCTAGTTT
CTAATTTCTAATTTCCCCGGAACGTCTGCGCGTATTTGTGTTCTGCCCGG
CCCTTTGCACCCCTTGCAGCGCGCGAAGCTCTTCAAGGCCGGCGTGGGAA
GAGATGAGGCCCGGCGCGGACGCAGCGAAACGCAAGTCCAGATCCGTAAG
GAAAAGAAGGAGGAGCGCCTTAACCAGCGGAGACGCAAGGGCTCGGCCGG
GGACGCGCTTGGAGGGTTTTCGTTCGCCACCATCCCCGAGGGCGGTGCTC
CCGCTGCGGGCACTGGCGCTGCCGCTGTAGACACTCCGGCTCACATGCGG
GTGAGTTTGTGTGTGCTTGCTGCATGTTGGTTTTCGGGGGATGGCGCCAG
AGTCATGTCTGGGTTGTTGGGTTTCTGTTTTTGTCATTGTTTCTGTTTCT
GTTTCACAAGGGCGGGCTCTTTAGGTTTTGTGGTCGGATTTGAAGACATG
AATCCCCGCCCAGCCCAGGGTAGGGTGTGTCTTCTGGCCGCGCTGTCTTG
TTCCGCGTGTGGCAACACAAGTGTACATACATCATATTAGTTCCGTTGAA
GTGGCGCTACCGGCGTTTTCCCGCTTTTTTTGCCCGTTGCCTGGGCGATA
TGGTTGAGGTGCACTGGTACGGCACAGCAGCTCTAGCAGGCATGCTCTTT
TTTTGTCCTTCGAGACTGACTCGATCTTGATCTCTATCTTTTGCACTTGA
GAGTAAAAACCGCTTCTGGCACCGCTGCTGTTTCTTGCGGCCCATTGGAA
CAAGGTCAGGCTTGTCTGGGGGTATTTTTTTCTTTCTTCTCGTCAAAACC
ACGCTTCGCAGACCGCAAACGGCATCTCACATCCACCCACGGGTTGGCTT
CTTTTGCCGTCAACCTTCAACCTAATCCCGTTCCTCCTTCGTCCCTCCCC
TTCCTTCCCTGCTCGAAGCTGGACCAATTGCCCCAACTAGTCATCGGCGT
ACAGAGCTCGGATCCGGCTGTCCAACTGGACACGACTACTGCTTTCCGGA
AAATCCTGTCGATAGGTGAATATAGGGGTCAACTACTATGTTCACAGGGG
GGGGTGCATCAGATACACCCGTGTTTCCATCCCGAGAGGCGTCCGCACCA
CAGACGCTTTAGCTTTACACTCTCGTTGGAACGATTAACCGGGCAAGTTG
CTGTCGAAACTAAGTCGGTCTATGTCGCGCACCTCGCCAGAACTTGCTCT
TGGTGCACACAAGTAAGACCTTCTCCTTCTCGACCCAAAGATGGACTATA
GTCTGCCGCTCCCTCAACCCCGCTCCTCTCTCTCGGTTTCTGTCTCTTGT
GTCCCGTCCTTTATCGCCGGCCTCTGCAACGCGATGTTGATTGTTGTTGT
TGTTGTTGTTGTCTCATCTCAGAGCGCAACCCTCCTATCCAAAACGTGAT
CGACGCGGGCGTGGTGCCCAAGTTCGTCGAGTTCCTCCAGCGCGACGACA
ACCCGGCTTTGCAGTTCGAATCCGCGTGGGCACTCACCAACATCGCCAGC
GGCACGAGCGACCACACGCGGGTGGTGATCGAGAAGGGCGCCGTCCCGAT
CTTCGTGCGTCTGCTCATGAGCCCCAACGACGACGTCCGCGAGCAAGCGG
TCAGTCCTGTCCATCGTTTTGTTGACCAGGGTCAGTTGTGTTTGGTTGGG
GAATCGTGTCGTGACTTGTAGATGGCAATACATAATCTGCCAGCGGTAAT
GTAGTCTGACGCGCCTAGTGCCTTTTTGGTGTAAAGCTTCAAGCTTTCGT
TCTCCAAGAGAAGACCTTCAGCATGACGCGCAACAGGTATGGTAGGTAAG
GTTTGGCGGCTGTACTGCGTGAGGATACGGGCTAGAGACAAAGAAATCGA
AGGAGAGCCCTGTGAAGCAACTTACACCCACCTCTGTCTCTGTCTCTCCC
GCAGGTGTGGGCGTTGGGTAATATCGCAGGTGACTCCCCGGTGTGCCGCG
ACCTCGTGCTCCAGCAGGGGGCCATGGGTCCCCTCCTCCAGCAGCTGACG
GACCGATCGAAGCTGTCAATGCTCAGAAACGCCACCTGGACACTGTCCAA
CTTTTGCCGCGGGAAGCCGCAGCCCAGCTTCGAACACGTCCGCCCCGCGC
TGCCTACCCTGGCGCAGCTCATCCACTCCGTCGACGAGGAGGTGGGTGGC
TGGCCGGCCGTAAGGCTGAATTGAGTACTCAGTTTTGTTGTAGTATAGTC
GCCAAGAACAATGAATAGCGGTGTTGCTGTTGGCGCGGAAGACGTGGTAA
TGCGTCCGCAGTTGCGTCAAGTGGCTCCACTCCTTTTACAGGCGAATCCT
GGCAGGTCGAAGCTAGGCGCAAGAGCAGAGGGCCTAAGAGCACCACTGGT
ATGAAGCTGATACTTCGATCGCCCGCCCTTGTTGAGCCACGGCGCTTGAC
TCTTGTTCTGGGTGTTGTTTCTTTTTGATGCTGGCTTACGCGGCCGGCGG
CGTGATGTGATGTGATCTCTCCAACTCCGAGCAGGTCCTGACGGACGCGT
GTTGGGCCCTGAGCTACCTGTCCGACGGGCAGAACGACAAGATCCAGGCG
GTGATCGAGGCCGGCGTGTGCCAGCGCCTAGTGGAGCTGCTGATCCACTC
CTCTCCCGCCGTACAGACGCCGGCCTTGCGCACCGTCGGAAACATCGTCA
CCGGCGACGACCTTCAGACGCAGGTGATCATCAACTTCAACGCGCTGCCG
TGGCTGCTCAACCTGCTGAGCTCGTCCAAGAAGGGCATCCGCAAGGAGGC
CTGCTGGACCATCTCCAACATCACCGCCGGCAACAAGGAGCAGATCCAGG
CCGTCATCGAAGCCAACATCATCCCGCCGCTCATCCAGCTCCTCTCCAAC
GCGGAATTCGACATTCGCAAGGTGTGTGTGTGTGGATTTCTGGGGCATCA
TATGTGTATCATACATCTTTGGGTTTGGTGGTTTTCATTTTTGGGTTTGT
GCCCGTGATGATGGTTTGGGTTTCACTCTGTTCCTGCTGTTCTGTTCGTT
TTGTCGTGGGATGTGACCGCACACTCTTGGCTCGGTGTACAGTTTTCACT
TTGGGTGTTGATGCTTGTCTGCAATCTGGCGTGCTGGGAATCCCCTTGCC
CGCGAAAACTGTAAGGTCGCGGACGGCTCATTCCTGTCTTGTTTGCGCCG
TTGCCTGCGAACCAACTTGCGGCTCTGATTTCTGTCGCGCTCTCGCCCTC
TCCCCCGCTCCTCATCCCAGGAAGCTGCCTGGGCAATTTCGAACGCCACC
AGCGGCGGCAAGCCGGAGCAGATCAAGTATCTGGTGACGGAGGGCTGCAT
CCCGCCCCTGTCGGACCTGCTGGAGGTGCACGACGCCAAGATCGTTACCG
TTGCGCTCGAAGGCCTCGAGAACATCCTGAAGGTGCGTCGACCAGCACCA
CAGCAGTAGTGATTTGTTTTGTTGATGTCGTTGTTTGCCTTTGTCGAGAC
GAGTAGCGATTTCTTCAGTTGATCCGAGATGCGCCGTTCTTCTGAAAGCT
ACTATACGGACCTTGTAGATGATCGATCGAACAGCTGTTCTGAACAGAAT
ATCGAGGACCTTTGATGTGGCTCAAGCAATCTCTCTAGGTTTTAGATCCC
CGACACCACCCGAATGCAAGTCAACAGCGCAGCAGATTATGATGTGTCCC
ATCATAACCTGTGGCATTTGCCCCGTTGTTGTACATGTCATATCGTATCG
CAGACCGGCGACACCGAGGCGAAGGCACAGGGCCAGGAGATGAACCAGAT
GGCCACGTACATCATGGAGTGCGGAGGCATGGAGCGCATCGAACAGTTGC
AGATGCACGACAACAACAACATCTACAACAAGGCCCTCAAGCTGCTCGAG
AGGTATTTCGGTGTGGAAGACGAAGAGGACAACGGTATCGCGCCCGTCGA
GACGGAGGGCGCCCAGCAGTTCGCGTTCGGGCAGCCGGCGCAACCAGGAG
CCGACGCCACCTTCGGTGCCCAACCCGCCCAGGGCGGATTCAACTTCGGC
TGA
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Coding sequence (CDS) from alignment at C-linearis_contig79:397846..403048+

>mRNA_C-linearis_contig79.15412.1 ID=mRNA_C-linearis_contig79.15412.1|Name=mRNA_C-linearis_contig79.15412.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3354bp|location=Sequence derived from alignment at C-linearis_contig79:397846..403048+ (Chordaria linearis ClinC8C monoicous)
ATGGCGAGCTACATGGGCAAGGACAAGGAGGCTGAGATGGCGAGCTACAT
GGGCAAGGACAAGGAGGCTGAGCGCGCGAAGCTCTTCAAGGCCGGCGTGG
GAAGAGATGAGGCCCGGCGCGGACGCAGCGAAACGCAAGTCCAGATCCGT
AAGGAAAAGAAGGAGGAGCGCCTTAACCAGCGGAGACGCAAGGGCTCGGC
CGGGGACGCGCTTGGAGGGTTTTCGTTCGCCACCATCCCCGAGGGCGGTG
CTCCCGCTGCGGGCACTGGCGCTGCCGCTGTAGACACTCCGGCTCACATG
CGGCGCGCGAAGCTCTTCAAGGCCGGCGTGGGAAGAGATGAGGCCCGGCG
CGGACGCAGCGAAACGCAAGTCCAGATCCGTAAGGAAAAGAAGGAGGAGC
GCCTTAACCAGCGGAGACGCAAGGGCTCGGCCGGGGACGCGCTTGGAGGG
TTTTCGTTCGCCACCATCCCCGAGGGCGGTGCTCCCGCTGCGGGCACTGG
CGCTGCCGCTGTAGACACTCCGGCTCACATGCGGCTGGACCAATTGCCCC
AACTAGTCATCGGCGTACAGAGCTCGGATCCGGCTGTCCAACTGGACACG
ACTACTGCTTTCCGGAAAATCCTGTCGATAGCTGGACCAATTGCCCCAAC
TAGTCATCGGCGTACAGAGCTCGGATCCGGCTGTCCAACTGGACACGACT
ACTGCTTTCCGGAAAATCCTGTCGATAGAGCGCAACCCTCCTATCCAAAA
CGTGATCGACGCGGGCGTGGTGCCCAAGTTCGTCGAGTTCCTCCAGCGCG
ACGACAACCCGGCTTTGCAGTTCGAATCCGCGTGGGCACTCACCAACATC
GCCAGCGGCACGAGCGACCACACGCGGGTGGTGATCGAGAAGGGCGCCGT
CCCGATCTTCGTGCGTCTGCTCATGAGCCCCAACGACGACGTCCGCGAGC
AAGCGAGCGCAACCCTCCTATCCAAAACGTGATCGACGCGGGCGTGGTGC
CCAAGTTCGTCGAGTTCCTCCAGCGCGACGACAACCCGGCTTTGCAGTTC
GAATCCGCGTGGGCACTCACCAACATCGCCAGCGGCACGAGCGACCACAC
GCGGGTGGTGATCGAGAAGGGCGCCGTCCCGATCTTCGTGCGTCTGCTCA
TGAGCCCCAACGACGACGTCCGCGAGCAAGCGGTGTGGGCGTTGGGTAAT
ATCGCAGGTGACTCCCCGGTGTGCCGCGACCTCGTGCTCCAGCAGGGGGC
CATGGGTCCCCTCCTCCAGCAGCTGACGGACCGATCGAAGCTGTCAATGC
TCAGAAACGCCACCTGGACACTGTCCAACTTTTGCCGCGGGAAGCCGCAG
CCCAGCTTCGAACACGTCCGCCCCGCGCTGCCTACCCTGGCGCAGCTCAT
CCACTCCGTCGACGAGGAGGTGTGGGCGTTGGGTAATATCGCAGGTGACT
CCCCGGTGTGCCGCGACCTCGTGCTCCAGCAGGGGGCCATGGGTCCCCTC
CTCCAGCAGCTGACGGACCGATCGAAGCTGTCAATGCTCAGAAACGCCAC
CTGGACACTGTCCAACTTTTGCCGCGGGAAGCCGCAGCCCAGCTTCGAAC
ACGTCCGCCCCGCGCTGCCTACCCTGGCGCAGCTCATCCACTCCGTCGAC
GAGGAGGTCCTGACGGACGCGTGTTGGGCCCTGAGCTACCTGTCCGACGG
GCAGAACGACAAGATCCAGGCGGTGATCGAGGCCGGCGTGTGCCAGCGCC
TAGTGGAGCTGCTGATCCACTCCTCTCCCGCCGTACAGACGCCGGCCTTG
CGCACCGTCGGAAACATCGTCACCGGCGACGACCTTCAGACGCAGGTGAT
CATCAACTTCAACGCGCTGCCGTGGCTGCTCAACCTGCTGAGCTCGTCCA
AGAAGGGCATCCGCAAGGAGGCCTGCTGGACCATCTCCAACATCACCGCC
GGCAACAAGGAGCAGATCCAGGCCGTCATCGAAGCCAACATCATCCCGCC
GCTCATCCAGCTCCTCTCCAACGCGGAATTCGACATTCGCAAGGTCCTGA
CGGACGCGTGTTGGGCCCTGAGCTACCTGTCCGACGGGCAGAACGACAAG
ATCCAGGCGGTGATCGAGGCCGGCGTGTGCCAGCGCCTAGTGGAGCTGCT
GATCCACTCCTCTCCCGCCGTACAGACGCCGGCCTTGCGCACCGTCGGAA
ACATCGTCACCGGCGACGACCTTCAGACGCAGGTGATCATCAACTTCAAC
GCGCTGCCGTGGCTGCTCAACCTGCTGAGCTCGTCCAAGAAGGGCATCCG
CAAGGAGGCCTGCTGGACCATCTCCAACATCACCGCCGGCAACAAGGAGC
AGATCCAGGCCGTCATCGAAGCCAACATCATCCCGCCGCTCATCCAGCTC
CTCTCCAACGCGGAATTCGACATTCGCAAGGAAGCTGCCTGGGCAATTTC
GAACGCCACCAGCGGCGGCAAGCCGGAGCAGATCAAGTATCTGGTGACGG
AGGGCTGCATCCCGCCCCTGTCGGACCTGCTGGAGGTGCACGACGCCAAG
ATCGTTACCGTTGCGCTCGAAGGCCTCGAGAACATCCTGAAGGAAGCTGC
CTGGGCAATTTCGAACGCCACCAGCGGCGGCAAGCCGGAGCAGATCAAGT
ATCTGGTGACGGAGGGCTGCATCCCGCCCCTGTCGGACCTGCTGGAGGTG
CACGACGCCAAGATCGTTACCGTTGCGCTCGAAGGCCTCGAGAACATCCT
GAAGACCGGCGACACCGAGGCGAAGGCACAGGGCCAGGAGATGAACCAGA
TGGCCACGTACATCATGGAGTGCGGAGGCATGGAGCGCATCGAACAGTTG
CAGATGCACGACAACAACAACATCTACAACAAGGCCCTCAAGCTGCTCGA
GAGGTATTTCGGTGTGGAAGACGAAGAGGACAACGGTATCGCGCCCGTCG
AGACGGAGGGCGCCCAGCAGTTCGCGTTCGGGCAGCCGGCGCAACCAGGA
GCCGACGCCACCTTCGGTGCCCAACCCGCCCAGGGCGGATTCAACTTCGG
CTGAACCGGCGACACCGAGGCGAAGGCACAGGGCCAGGAGATGAACCAGA
TGGCCACGTACATCATGGAGTGCGGAGGCATGGAGCGCATCGAACAGTTG
CAGATGCACGACAACAACAACATCTACAACAAGGCCCTCAAGCTGCTCGA
GAGGTATTTCGGTGTGGAAGACGAAGAGGACAACGGTATCGCGCCCGTCG
AGACGGAGGGCGCCCAGCAGTTCGCGTTCGGGCAGCCGGCGCAACCAGGA
GCCGACGCCACCTTCGGTGCCCAACCCGCCCAGGGCGGATTCAACTTCGG
CTGA
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