mRNA_C-linearis_contig79.15386.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig79.15386.1
Unique NamemRNA_C-linearis_contig79.15386.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig79.15386.1 vs. uniprot
Match: D8LMG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG0_ECTSI)

HSP 1 Score: 416 bits (1068), Expect = 1.870e-138
Identity = 209/222 (94.14%), Postives = 217/222 (97.75%), Query Frame = 3
Query:  426 MDMEATADQMVTLLSVNPQRVYKTAYYRKQTRNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSFCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVWLYVVQLLLLPLLVGQSVWSLVLSNTLYAVAFSMYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIFLLPFGVRVNATLTVAKMYFLD 1091
            MDMEATADQMVTLLSVNPQRVYKTAYYRKQT+NHWARDDPGFAVLQ FFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSS CRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFV LYVVQLLLLPLLVGQSVWSL+L+NTLYAVAFS+YFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSI LLPFG+R+NATL +AK+YFLD
Sbjct:    1 MDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQTFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIILLPFGIRINATLAMAKLYFLD 222          
BLAST of mRNA_C-linearis_contig79.15386.1 vs. uniprot
Match: A0A835Z945_9STRA (UNC-50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z945_9STRA)

HSP 1 Score: 288 bits (737), Expect = 1.560e-88
Identity = 152/263 (57.79%), Postives = 188/263 (71.48%), Query Frame = 3
Query:  303 MLP-SSVGSRYASHRHGSSYGQSMSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTRNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSFCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVWLYVVQLLLLPLLVGQSVWSLVLSNTLYAVAFSMYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIFLLPFGVRVNATLTVAKMYFL 1088
            MLP      RYA HR  SSYG   SV    P+Y  R+FD+ Q+DME+  DQMVTLLS+NP RVYKTAYYRKQT+N WARDDP FAVLQ  F V    A+G+AFG R  W Y+ L+ ++V +HWLL GV  ++  R +AN+ +L  R+HSVEQ VEW+YA DIH N+FF LF+ +YV Q LLLP+L+G SV +L+LSN LYA+ F  YFY+THLGYRSLPFL  TE FLYPVV ++ LL  S+ L   G+RVN T  +A +YFL
Sbjct:    1 MLPLDGRNGRYAPHRRHSSYGGDRSV----PEYFARLFDFKQLDMESACDQMVTLLSLNPGRVYKTAYYRKQTKNQWARDDPAFAVLQLAFSVAGAVAYGMAFGLRAFWGYIALIANAVLLHWLLFGVAAATAGRALANAHMLVRRAHSVEQRVEWLYAFDIHCNAFFMLFIVVYVGQFLLLPVLLGPSVGALLLSNALYALGFGAYFYITHLGYRSLPFLCKTETFLYPVVAVVTLLATSVLLAALGMRVNMTRVMAHVYFL 259          
BLAST of mRNA_C-linearis_contig79.15386.1 vs. uniprot
Match: A0A7S0G7V0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G7V0_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.790e-69
Identity = 128/252 (50.79%), Postives = 176/252 (69.84%), Query Frame = 3
Query:  351 SSYGQSMSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTRNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGL--LLHSVGVHWLLCGVVMSSFCRWIANSRLL-QH----RSHSVEQEVEWMYALDIHSNSFFPLFVWLYVVQLLLLPLLVGQSVWSLVLSNTLYAVAFSMYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIFLLPFGVRVNATLTVAKMYF 1085
            SSYG   ++S+    YL R+ D+ QMD+++  DQM TL ++ PQRVYKT+YYRKQT++HW+RDDP FA+LQ  FL VA+ A+ +AF   G   Y  L    +++ +++LL GVV+S+ CR IAN+ L  QH     SH V Q VEW+YA DIH N+FFP FV +Y  Q  LLP+++ + + SL++SNTLYA+AF  YFY+THLGYR+LPFL  TEVFL+PV G+  + +L+    PFG+  NA+  VA +YF
Sbjct:   41 SSYGGMSAMSYDPQQYLHRILDFQQMDVQSALDQMRTLCTLQPQRVYKTSYYRKQTKDHWSRDDPAFAILQIGFLAVASLAYCIAFRVSGNMIYGTLRFAFNNIIINYLLSGVVISTICRSIANTYLTHQHPRNSNSHVVRQGVEWLYAFDIHCNAFFPFFVLIYCAQFFLLPVVLQRGLVSLIVSNTLYALAFGWYFYITHLGYRALPFLSGTEVFLFPVAGVAAIYVLNFIGFPFGLGFNASRLVAHLYF 292          
BLAST of mRNA_C-linearis_contig79.15386.1 vs. uniprot
Match: A0A7R9YBX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBX5_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.950e-69
Identity = 122/231 (52.81%), Postives = 166/231 (71.86%), Query Frame = 3
Query:  369 MSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTRNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSFCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVWLYVVQLLLLPLLVGQSVWSLVLSNTLYAVAFSMYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIFLLPFGVRVNAT 1061
            +S+  S+P+YL R+ D+  MD EAT DQM+TL S +P RVYKT +YRKQ +N WARDDP FAV Q   L V   A+ +AF    +  Y+ L+L+ V V W L G V+++   ++AN  LLQ  SHSV Q+VEW+YA DIH N+FFPLF+ ++V+Q  LLP+L+ +   S++LSN LYA AFS+YFY+THLGYR+LPFL  TEV+LYP+  + +  +LS+F+ P GVR+NAT
Sbjct:   21 VSLPASVPEYLCRVLDFRSMDFEATLDQMLTLASSDPGRVYKTNFYRKQMKNQWARDDPAFAVAQVLLLSVVAVAYALAFRVDSLSGYLSLILYCVVVDWFLFGCVVATIGWFVANKYLLQSHSHSVAQKVEWLYAFDIHCNAFFPLFLLVHVLQFFLLPILLLKVYPSMILSNLLYAAAFSVYFYITHLGYRALPFLTKTEVYLYPIGVVALAFVLSLFIAPLGVRINAT 251          
BLAST of mRNA_C-linearis_contig79.15386.1 vs. uniprot
Match: A0A7S1Y6X4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6X4_9STRA)

HSP 1 Score: 235 bits (600), Expect = 9.970e-69
Identity = 127/242 (52.48%), Postives = 165/242 (68.18%), Query Frame = 3
Query:  369 MSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTRNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSFCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVWLYVVQLLLLPLLVGQSVWSLVLSNTLYAVAFSMYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIFLLPFGVRVNATLTVAKMYFLD 1091
            MS       YL R+ D  QMD ++  DQM +LL   P  VYKTAYYRKQT+NHWARDDP F VLQA FL+V+  A+ VAF A  + T++G L+HS+  +WL+ G ++ S  R +AN  L  H+S S V Q VEW+YA DIH N+FFPLF  LY VQ  LLPL++G S  +LV++NTLYAVAFS Y+Y+THLGYRSLPFL  TEVF++P+  +I+L +L++   PF    N     A++Y  D
Sbjct:    1 MSSKGRPTQYLARLTDVRQMDAQSALDQMKSLLGSRPHTVYKTAYYRKQTKNHWARDDPAFCVLQAIFLLVSVVAYSVAFKAS-IGTFLGFLIHSLFWNWLVSGALVCSILREVANRHLTVHQSTSHVRQSVEWLYAFDIHCNAFFPLFCVLYGVQFFLLPLILGNSFLALVVANTLYAVAFSWYWYITHLGYRSLPFLTNTEVFMFPIAAVILLFVLNLVGYPFNFGWNFARVFAQIYLRD 241          
BLAST of mRNA_C-linearis_contig79.15386.1 vs. uniprot
Match: A0A7S2U7N4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7N4_9STRA)

HSP 1 Score: 236 bits (601), Expect = 3.180e-68
Identity = 131/260 (50.38%), Postives = 178/260 (68.46%), Query Frame = 3
Query:  312 SSVGSRYASHRHGSSYGQSMSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTRNHWARDDPGFAVLQAFFLVVATFAFGVAFGARG-VWTYVGLLLHSVGVHWLLCGVVMSSFCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVWLYVVQLLLLPLLVGQSVWSLVLSNTLYAVAFSMYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIFLLPFGVRVNATLTVAKMYF 1085
            SS  S Y S   G +   S+    S   YL R+ D  QMD+++  DQM TL +++PQRVYKT+YYRKQT+NHWARDDP F  LQ  FL +A+ A+ VAF     V + +G  + S+ ++W   G++++S  R  AN  L  H+S S V Q VEW+YA DIH N+FFPLFV LY +Q  LLP+++G+S+ SLVL+NTLYA AFS YFY+THLGYR+LPFL +TEVFL+P+ GI+++ L+++   PFG   NA+  +A  YF
Sbjct:   30 SSSRSTYGSGSGGGALS-SLGTVMSPAQYLARLVDVQQMDVQSALDQMRTLCTLSPQRVYKTSYYRKQTKNHWARDDPAFCFLQMVFLALASIAYCVAFREDSLVSSTIGFAIKSILINWFGLGILIASIGREFANRHLTVHQSSSHVRQGVEWLYAFDIHCNAFFPLFVALYGLQFFLLPIVLGKSLLSLVLANTLYAAAFSWYFYITHLGYRALPFLSSTEVFLFPIAGIMIVYLINLVGYPFGFGWNASRIMAHFYF 288          
BLAST of mRNA_C-linearis_contig79.15386.1 vs. uniprot
Match: A0A7S2ENT4_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENT4_TRICV)

HSP 1 Score: 233 bits (594), Expect = 6.440e-67
Identity = 127/244 (52.05%), Postives = 171/244 (70.08%), Query Frame = 3
Query:  369 MSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTRNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVW----TYVGLLLHSVGVHWLLCGVVMSSFCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVWLYVVQLLLLPLLVGQSVWSLVLSNTLYAVAFSMYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIFLLPFGVRVNATLTVAKMYF 1085
            ++ S +   YL R+ D  QMD ++  DQM TLL+  PQRVYKTAYYRKQT+NHWARDDP FA LQ  FL VA+ A+ VAFG+ G+       +G  L S+ ++WL  G+V +S CR I+N+ L+ H S + V Q VE++YA DIH N+FFPLFV +Y VQ  LLP+++G+ + +L+LSN L+A AF  YFYVTHLGYR+LPFL  TEVFL+PV  +++L  L++   PFG   NA+  +A +YF
Sbjct:   67 LTSSMTPSQYLSRILDVGQMDFQSALDQMKTLLTPQPQRVYKTAYYRKQTKNHWARDDPAFAALQIAFLSVASLAYSVAFGSDGLGGTLTAALGFGLKSILINWLAVGLVTASVCRSISNNHLVVHSSAAHVRQRVEFLYAFDIHCNAFFPLFVLIYGVQFFLLPVVLGRGLMALLLSNALFAAAFGWYFYVTHLGYRALPFLTNTEVFLFPVALVVLLFFLNLIGHPFGFGWNASRIMAYVYF 310          
BLAST of mRNA_C-linearis_contig79.15386.1 vs. uniprot
Match: A0A7S1GMY0_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMY0_CYCTE)

HSP 1 Score: 228 bits (582), Expect = 5.040e-66
Identity = 121/230 (52.61%), Postives = 167/230 (72.61%), Query Frame = 3
Query:  396 YLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTRNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSFCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVWLYVVQLLLLPLLVGQSVWSLVLSNTLYAVAFSMYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIFLLPFGVRVNATLTVAKMY 1082
            YL R+ D+ QMD+++  DQM +LL   P  VYKT+YYRKQT+NHWARDDP F VLQA FL VA+ A+ VAF +  +   +G LLH++  +WL+ G ++++  R +AN  L  H+S S V+Q VEW+YA DIH N+FFPLF  LY VQ  LLPL++G+S+ + +LSNTLYA AFS Y+Y+THLGYR+LPFL  TEVFL+P+ GI ++ +L++   PF +  NA+  +A +Y
Sbjct:   21 YLARLTDFRQMDIQSALDQMRSLLGGRPHVVYKTSYYRKQTKNHWARDDPAFCVLQAVFLFVASLAYAVAFRST-LSGGMGFLLHTILWNWLVAGTIVATIARELANRHLCVHQSTSHVKQTVEWLYAFDIHCNAFFPLFCLLYGVQFFLLPLVLGKSLLAFLLSNTLYAAAFSWYWYITHLGYRALPFLSNTEVFLFPIAGIALVFVLNLVGYPFDMGWNASRLLATIY 249          
BLAST of mRNA_C-linearis_contig79.15386.1 vs. uniprot
Match: A0A1E7FEU6_9STRA (UNC-50 protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEU6_9STRA)

HSP 1 Score: 228 bits (581), Expect = 5.270e-66
Identity = 122/240 (50.83%), Postives = 168/240 (70.00%), Query Frame = 3
Query:  369 MSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTRNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSFCRWIANSRLLQHRSHS-VEQEVEWMYALDIHSNSFFPLFVWLYVVQLLLLPLLVGQSVWSLVLSNTLYAVAFSMYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIFLLPFGVRVNATLTVAKMYF 1085
            M+ S S   Y+ R+ D+ QMD+++  DQM T+LS  P  VYKTAYYRKQT+NHWARDDP FA L+  FL V+  A+ ++F    V   +   L+SV  +WL  G ++++  R +AN  L  H+S S V Q VEW+YA DIH N+FFP+FV LY VQ  LLPL++G+S++SLV+SNTLYA  F+ Y+Y+THLGYR+LPFL  TEVFL+PV  I ++ +L++   PFG+  NA+  +A +YF
Sbjct:    1 MTSSASTAQYIARLTDFRQMDIQSALDQMKTILSTRPHVVYKTAYYRKQTKNHWARDDPAFAALEFIFLTVSCIAYAISFRVP-VTEGIAFWLYSVLFNWLGLGFIIATVGREMANRHLTDHKSTSHVRQSVEWLYAFDIHCNAFFPVFVLLYGVQFFLLPLVLGKSLFSLVVSNTLYAAGFAWYWYITHLGYRALPFLSQTEVFLFPVAAIALVFVLNLVGYPFGLGWNASRIMAHIYF 239          
BLAST of mRNA_C-linearis_contig79.15386.1 vs. uniprot
Match: A0A2D4C7P5_PYTIN (Transmembrane protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7P5_PYTIN)

HSP 1 Score: 230 bits (586), Expect = 6.780e-66
Identity = 126/241 (52.28%), Postives = 166/241 (68.88%), Query Frame = 3
Query:  384 SLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTRNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSFCRWIANSRLLQHRSHS------VEQEVEWMYALDIHSNSFFPLFVWLYVVQLLLLPLLVGQSVWSLVLSNTLYAVAFSMYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIFL-LPFGVRVNATLTVAKMYF 1085
            + P+Y  R+ DY QMD++AT  QMVTL  V P +VYK+AYYRKQT+N WARDDP FAV+Q  FL+VAT A+ VAF    V +Y+ LL H+V V WL  G+V+++ C WIAN  L    +        VEQ VEW YA DIH NSFF LF++LYVVQ LL+P++  +S  +LVL+N+LYA+A+ +Y Y+T LGY +LPFLH TE FL+P V I+ L + S+FL L FG   NA+    + Y+
Sbjct:   60 AFPEYFSRVIDYRQMDLDATFYQMVTLC-VQPSKVYKSAYYRKQTKNRWARDDPAFAVIQLLFLLVATVAWAVAFRVHSVSSYLSLLFHAVVVEWLGFGLVIATLCWWIANHSLRLRGNQGIGDTFFVEQRVEWQYAFDIHCNSFFVLFLFLYVVQFLLVPIIAYESFMALVLANSLYALAWGLYVYITFLGYMALPFLHKTERFLFPTVAIVALFVSSLFLKLAFGSAFNASHMSMRYYY 299          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMG0_ECTSI1.870e-13894.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z945_9STRA1.560e-8857.79UNC-50 n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A7S0G7V0_9STRA1.790e-6950.79Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7R9YBX5_9STRA2.950e-6952.81Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1Y6X4_9STRA9.970e-6952.48Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2U7N4_9STRA3.180e-6850.38Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2ENT4_TRICV6.440e-6752.05Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S1GMY0_CYCTE5.040e-6652.61Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A1E7FEU6_9STRA5.270e-6650.83UNC-50 protein n=1 Tax=Fragilariopsis cylindrus CC... [more]
A0A2D4C7P5_PYTIN6.780e-6652.28Transmembrane protein, putative n=1 Tax=Pythium in... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig79contigC-linearis_contig79:98774..104928 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score416.0
Seed ortholog evalue1.3e-113
Seed eggNOG ortholog2880.D8LMG0
Preferred nameUNC50
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005737,GO:0005794,GO:0006810,GO:0006937,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0019866,GO:0023052,GO:0030173,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031503,GO:0031965,GO:0031967,GO:0031975,GO:0031984,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044057,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051641,GO:0051668,GO:0051716,GO:0065007,GO:0090257,GO:0097120,GO:0097159,GO:0098588,GO:0098791,GO:1901363
EggNOG free text desc.protein transport
EggNOG OGsKOG3012@1,KOG3012@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size2269
Cds size792
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930489.9936297-UTR-C-linearis_contig79:98773..990741622930489.9936297-UTR-C-linearis_contig79:98773..99074Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 98774..99074 +
1690881096.2893333-UTR-C-linearis_contig79:98773..990741690881096.2893333-UTR-C-linearis_contig79:98773..99074Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 98774..99074 +
1622930490.0128355-UTR-C-linearis_contig79:99919..999201622930490.0128355-UTR-C-linearis_contig79:99919..99920Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 99920..99920 +
1690881096.301277-UTR-C-linearis_contig79:99919..999201690881096.301277-UTR-C-linearis_contig79:99919..99920Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 99920..99920 +
1622930490.1606088-UTR-C-linearis_contig79:103753..1049281622930490.1606088-UTR-C-linearis_contig79:103753..104928Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 103754..104928 +
1690881096.3992615-UTR-C-linearis_contig79:103753..1049281690881096.3992615-UTR-C-linearis_contig79:103753..104928Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 103754..104928 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930490.027016-CDS-C-linearis_contig79:99920..1000431622930490.027016-CDS-C-linearis_contig79:99920..100043Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 99921..100043 +
1690881096.3112197-CDS-C-linearis_contig79:99920..1000431690881096.3112197-CDS-C-linearis_contig79:99920..100043Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 99921..100043 +
1622930490.040058-CDS-C-linearis_contig79:100459..1005211622930490.040058-CDS-C-linearis_contig79:100459..100521Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 100460..100521 +
1690881096.3220365-CDS-C-linearis_contig79:100459..1005211690881096.3220365-CDS-C-linearis_contig79:100459..100521Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 100460..100521 +
1622930490.0524688-CDS-C-linearis_contig79:101294..1013201622930490.0524688-CDS-C-linearis_contig79:101294..101320Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 101295..101320 +
1690881096.3333724-CDS-C-linearis_contig79:101294..1013201690881096.3333724-CDS-C-linearis_contig79:101294..101320Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 101295..101320 +
1622930490.0686882-CDS-C-linearis_contig79:101971..1020361622930490.0686882-CDS-C-linearis_contig79:101971..102036Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 101972..102036 +
1690881096.3524628-CDS-C-linearis_contig79:101971..1020361690881096.3524628-CDS-C-linearis_contig79:101971..102036Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 101972..102036 +
1622930490.087368-CDS-C-linearis_contig79:102245..1023701622930490.087368-CDS-C-linearis_contig79:102245..102370Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 102246..102370 +
1690881096.361849-CDS-C-linearis_contig79:102245..1023701690881096.361849-CDS-C-linearis_contig79:102245..102370Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 102246..102370 +
1622930490.1066446-CDS-C-linearis_contig79:102679..1028091622930490.1066446-CDS-C-linearis_contig79:102679..102809Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 102680..102809 +
1690881096.3701508-CDS-C-linearis_contig79:102679..1028091690881096.3701508-CDS-C-linearis_contig79:102679..102809Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 102680..102809 +
1622930490.1235893-CDS-C-linearis_contig79:103005..1031201622930490.1235893-CDS-C-linearis_contig79:103005..103120Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 103006..103120 +
1690881096.3787389-CDS-C-linearis_contig79:103005..1031201690881096.3787389-CDS-C-linearis_contig79:103005..103120Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 103006..103120 +
1622930490.1429842-CDS-C-linearis_contig79:103607..1037531622930490.1429842-CDS-C-linearis_contig79:103607..103753Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 103608..103753 +
1690881096.3902812-CDS-C-linearis_contig79:103607..1037531690881096.3902812-CDS-C-linearis_contig79:103607..103753Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 103608..103753 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig79.15386.1prot_C-linearis_contig79.15386.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig79 99921..103753 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig79.15386.1

>prot_C-linearis_contig79.15386.1 ID=prot_C-linearis_contig79.15386.1|Name=mRNA_C-linearis_contig79.15386.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=264bp
MLPSSVGSRYASHRHGSSYGQSMSVSWSLPDYLRRMFDYHQMDMEATADQ
MVTLLSVNPQRVYKTAYYRKQTRNHWARDDPGFAVLQAFFLVVATFAFGV
AFGARGVWTYVGLLLHSVGVHWLLCGVVMSSFCRWIANSRLLQHRSHSVE
QEVEWMYALDIHSNSFFPLFVWLYVVQLLLLPLLVGQSVWSLVLSNTLYA
VAFSMYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIFLLPFGVRV
NATLTVAKMYFLD*
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mRNA from alignment at C-linearis_contig79:98774..104928+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig79.15386.1 ID=mRNA_C-linearis_contig79.15386.1|Name=mRNA_C-linearis_contig79.15386.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6155bp|location=Sequence derived from alignment at C-linearis_contig79:98774..104928+ (Chordaria linearis ClinC8C monoicous)
GACTGGTTGGTCGTTTGTTCGTGTTGCAAGAGGGGTAGGTGTGGGTGCAG CGTACGAGAAGTAAACAAAAATATCTCAGCATACACCAAGCCTCGCCAGC AGAATTATAGGGGAATACATTGTCCTGGGGGGGTCTGAGGGACGCTTTTT CAAAAGCTGTGAATCGGAAATTGCTTTGAAACGAGTTGGCTGTGGCAGGT GCAGGAACTAACCGCTGCCGGTTTTGAGTACACAGGCGTGGTTGGCGACT TGGCGTGGAGCTACTGGTGCTTCGAAGCTGGGGAGAACGTTGTCCCTTCA CGTGAGTAGTCTTGTCGAATATGACGGTGAGACTTGCACTTTGTTTGTTA GCTCTGTGTGGGACATATTCTCAAGAAGCGAACTGCGGAGCCACAGCCCA TTGCTTCTCGCGTCCACACCTCTCTCTCTCTCTCACTGCTGCGTACGTTA GGGCTGCAAAGGATTTTTTGTCCAGGAATGTGAACCCTTTCTTAGCTATG TATATGTTCCTGTACCTGCTTTCAGTCTTTGGCCCAATGCTGGCGTAATT GAGTCGACTTGACTATATAGTCCACAATCCAAACAAAATAGAGGGCGGTG TTCCGCAAAAGGTACAACCGCTTTGCCCTTACCCTCCCCTGCTGCTGCTC TAGAAGGCTTACAGAATTCTGTCGTGCTTGGATCTTCGACGCATTTCAAA ACTGTTTGAGCAAGCTTCCCATCCACCAGGAATACTGCTACGCTTGTCCC TATATTTTTGATACATCTGCCATGAACTGAACAGGCGGGCAAGTGTTGCC CCCCGCAGAAGCAGTGACTGACCTATACCAGATACTGCTATACGACGCTG CTCTCACCCCCTTTTGTGCAGAGTTATCGCCGCCTTCCCCGTGTGTAGCA TATGCCCCTCTCTTTCAGTCAAGTCCTGCGACTGGCAACCAACTGCTGTG CCAGCGTTGCCGCTCCAAACCACATTTTTTTGGCTCCTCGTCGGCTACAT GCCCACCAAGTGCGTGCTCTAATAGGTGTAGACTCTTTTCAGGTGGATGC ATCGTTTTGTTTGTTTTGAAAATCTGGGTTGTACTCTCCAACGCTCTGCG CTTGAAATATCCTTTCGCGCACCATTGCACCATGCTAAATTAGCAGGATG CTTCCGAGTAGCGTGGGCAGCAGGTACGCTTCTCACCGACATGGGTCATC ATACGGGCAGTCGATGTCGGTGTCGTGGAGCCTTCCGGACTACTTACGAC GGATGTTTGATTACCACCAGGTAGGTCGAAACCCCAACAAAGATGTCTAT CCGAAAGATCTATCCGAAACTCCTTAAATTGCCGAAAGTGGTCGTGTCCC CGGTGGTATACAGCAGTGGTACACGGTCTTTGCAATGTGTGGGTCTTCCT TCCTCCTTCGAGTGGAAAAGGTACGCGTGCCAGAGAAAAGTCGCGCACTT TGTGGGGGACGTAGTTTTGGGGGACGTAGTTTTGGTGCCGATCGAAACAC CTGGGACTGGCTGAACTGGAATGCGCAAAAGTCCGCCTGCCGTCTATATG GCCTTTGCCCTCCAGCGTTGTATGTACGATGATCGACCGCACAACGGTCT GGGTCTAATTTACCCGCTCTCGATCTCCGCGCGCGTGCCGCTTCTCCGTG CTGCTCTCATGAACCTATGTGCGATCGCACGATAAGATGGATATGGAGGC GACGGCAGATCAAATGGTGACCCTCTTGAGCGTCAACCCCCAGAGAGTGT GAGTGGTCGGTATTGGGTTGGGCTTGTGGTGGTTCAAAGTGGAAGCTCTC TGCATGTATTCTGCACACCAGTGTAGAAGCATGCGTTCAAGGGGCGGGTA TGTTTGTTTTCCGCAGCATTTTGACCGATGGCCATGCACCCCTTTCGAAG CAGACGGCACCCTTCCTACTATACCACCAATATTTGCGGCGTCCTAGACG TGTTTGCATCGTTTTTCACAAGCAATTATCGTGCCTTGCTTATGCCCTTG CTTTGTTGGCCTTTTGTGGCCACCCCTCACCGGCTGCAGGATAGTAGTGC AAAGGGTGGTGTCAGTGTAGCTAACATCGCTTTTCCTGTTCCATTACTCA AGGTCGTCCCTTGCATCTCCGTACAGTCAGTTCATAACTCTCGACTGTCA AAGTTGTACGGGCCTGTGCCTCACTATTTGGTTAGGGGAGACTATTTAGT CTACTTCTTAGTCGATCCTGTGGCCTTGTTAAATCATTTGCATGGCAGTT TTTTCTGCTGCTGTATTGCTGAGGTAGCCCTTTCCGAGGTGCGAGTGCCA GCCGCCAAAGCTGTTTTGTATTGCTCTTGACTCTAAACAATTGTCACTTT ACGTACCGAAATGGTGCCTGCGCAGTAGTGGTGCTGTCTCGTCTGTCTTT CCACCCTACCCGAATATTGTACGGTCTATTGATACTGACGCCTTGATCCG TATCGTGTCTTGTTGGTTGCTGCTCCTCTTATGATAACGGAATGCGATGG ACCGGGTTTTGTTCTCAACAGGTACAAGACGGCGTACTACCGAAAACGTG AGTGTTGAAGTGCCCTTCTACGCTACAAAAGCGCTGTGCGGCGCCGTATG TTTTCGGGTGTCAGTCCCTTCAACTTCCTTGGCTGTTTGTCATACATATG CGTTCATAGTTTGGTAGCTGCACGAGTACCCAACGCGAGGCCTGACGTTG CCATCGGTAGGCTATTTAGTGTAGATTGTCGAGTCAAGTTGTAGAAGCTG CAAGGTCTTGCTACTGCGTATCCCCTATCCATGCTTCAATTCTCTGTTTT TTCTGCTGAACTCGGGGAGGCTGATTCGGCTGCTTCTCGATGGTGACCGC AAGCTCGTTTGTTTTATTTTACCTTCGCCTAGTTCTTGAATCACTCCGTT CTACAGCGTAAGCTCCTGTTCCTGCCTACATGTACCTTCCTCTTGACCGA AACGAATCCTAAGATCGTCGGCACGGCGTTGTTGTGTTAACTAGCTGTTC CTTTGGAGGCCTACTTGTTTGACTAGATTGCTCGCCCCCTTTGCTTTCGC CAAAATTCGCATGGCAAGTGCTGACCTCCTTTGGACGGATCTGCTCAGAA TAGCATGCAAGATAGAGATGCATGTATCACGTCCTAACCCCTCACCCGTC GACTCCGAAATACGATTGTTTGCCCGCTCATTCGTGTGCCCACGGCAGAA ACAAGAAACCACTGGGCAAGAGACGATCCGGGGTTTGCAGTCCTGCAGGC GTTTTTTCTTGTGGTGAGTGACATTAACATTACCTTACCACGCCTAGGAG GGTTCGAATTGCCCCGCGCACCGCCGACACCAATTTTTTGTGTTGTGTCT CGTAACACTGCTGCGTAACACAGCGATGTACCCACTTTCCCGTTCCATGT AGTCTTGTTTGTGATGACGTTTCCGCTCCGTTTTTGGTTTGTGCGCTGTC GTGGTGTTTCTCTTCGAAAAAGGTGGCGACATTCGCCTTCGGCGTGGCGT TTGGCGCTAGAGGCGTCTGGACGTACGTGGGGTTGTTATTGCACTCGGTG GGGGTACACTGGCTGCTGTGTGGGGTGGTGATGTCATCGTTCTGCAGGTG AGGCTTTAGTCAACCCAAGCATTGGGGGTGTTGCCGTTTTCACGGAAACT TGTATACGTGTAGTGGACTGTATCGTTGCGTGTGGTGGTGCTGTTGCTGC CTGTTTCGCAATACCATAACACCGCTTGCGGCAGGTGGCCTCTTTTCAGA CGCCAGCGAAACCCAACCCTGATTGTTTTTTCGGTCAATGTAGGTCTTGA GAGGCAAGGTCCTGTACAGTAGTAGAAGTGTCGGGAACGAGGCTACTACA TATGACATTCTTTATTTGGGTGGTGTGACAAGACAACACGGCCACCCTTG TTGCAGGTGGATAGCAAACAGCCGCTTACTGCAGCACCGGTCTCATTCCG TGGAGCAAGAGGTGGAGTGGATGTACGCCCTGGACATCCATAGCAACTCG TTCTTCCCGCTCTTCGTGTGGCTCTACGTGGTGCAGGTGAGATAAGGCTG CTCGTCGTCGCCGTTCATGTTGTTGTGTTGTTATGGGTTCAGTATAGAGA CAAGTTCAGCTCCCCTTAAGACTTTGAAACGTTGCTGTGTCCCAGGAAGC CGGCATCCAAGAGATCAAAACAGCCTCGAAAGCAACCTGACAAATCTTGT CGTACCGGTGAAACGTCCCTTCTGCTTTGCAGCTCCTGCTGCTGCCTCTG CTGGTGGGGCAGTCGGTGTGGTCCCTCGTGTTGTCCAACACTCTCTACGC CGTGGCCTTCTCCATGTACTTTTATGTTACTCACCTGGGCTATCGATGTG AGTACTGGGCAACGCTACAGTAGTCAGCCCTGGATGTCACGTCATGTGCA GGGTGTATGATGGTTGCTTGGAGGGTCGCCTTCTCTTAAACTCCTCTCGT GTTCTCGTGTGTCACGTTGCGCGAGAATATTTTACGACACGTTTTGGTTT GGCGGAGGTCAACATTTCGAATCTTGCTTGTATGCTTTTCGACGTCGTCA GATTTCCATACCCTCCTCGAACGATGAATTTTCCAGGTTGAATTCGCCGG AAACTTTTATTGTCAAGCCTACTTTACCCCTTTCCGGACAGATGCCCTCC TGTTTTTATGATGTACCCTCGTGAGGATGTCCTTCATGTAGCCGCTTCGT GCCTACAGAGTGCATGATGGCCAAAATCCAGCTCCAGTGTATCGCGACTC GAACTAGGTATGTTGCTGTTCTGGACCCTCAACTTTCCCTTTCCCCCGTT CCCCCTTGACACAAACCACATGCACCACATGCAGCACTCCCCTTCTTACA CACGACGGAGGTCTTCCTTTATCCGGTGGTCGGCATCATCATGCTGCTCC TTCTATCCATTTTTCTCTTGCCCTTTGGGGTTCGCGTCAATGCCACCCTC ACCGTTGCAAAAATGTATTTCCTCGATTGAGATTGAGGCTGTTCGATTTG GTCTCGGCTGAAGCAAACTTGTATACGTTGTACCAGGTATTTTAGCTGTT TTCTCCCTCTAGATCCGAAGCTGTGTCTTCCGAATATATTCTCGGTTGAG GCTGGTGGAACAAACGCAAACTTCGACGAAGTAGGTTCAAGCGAGCAACC AATGACCGCATAAGGTGTGAAAGGATGGCGTTTGGGTTTGCTTCGCCTCT GGCCATCGAACATTAACGTTGCGCACGAAGCGGTGACAGAAAACCTTATC CTGTTTAATCGGGCGTGACGCTGCTGTTGGGAGCAATGCAGCAATAGCAG TACGTGCAGCAGCAGTGCAGTCCGTTGACACTGCTCAGTCTTGGGTTACC AGTGCGGGGGGTTCTTTGTTATTTTTCTTTTGTTTGGCGGGGCGGCGTTG GTGAACGTCAGGCATTTGTCAAATTTCCGTCGTTTCTTCTTTTTACGGAA GTGCTAAAAATGGTTTCCTTCCTTGCGGCTTGTGGCGCAGCTTAGGTGAT GCCTTTCTTGCGATGTTGATATTCACGAAAGGAGGTACATTGAGGGGGTG GTGGCCATCAGCCATCGTGTTTGACGCGGACGAATCAATAAAAGTAGGAA GAAGTTCAACGGTTGAGCTCCTTTACCACAGATACCTATCGTAGCAGCTA CGGAGCGTCAGCTCCCCGTCTTGCCTGAGTCTTTCGCACCCGGTTGTTTG TCCATGTATCATGTTTTTTTCGACGGACAGCAGTGACGAGCATCATGCGA ATAAAAAAAATCATGTTTCGGTATCCCTCTCTCTCGCTCTCTTGGGCCCT CTGGTGTGTGGGTTCGCCAAAACTCGCTTGTCGAGCCTATGTGGTGTTGA GACTCGAAAAGGCTTGGACGACCGCGCGCGATGCCCTTCTGTGACAGGTA GATAGGGATACCCGCGAGCACTGGCGTACTGGCCAGCTCCATGGTGTGTC TGGTGGCGAAAAAATGTGGCTTTAGGCGCGCGCCCCCTTGAGATAATTTT TGGCGTCTGGCGTCTGTATTGCGATTCATTCGGTGGGATCGTTAGATGCG CGCCCCTCCTCTTCCAATTGTGTGTTCTAGGCCTGTGCGAAGGCATGGCC GAGAGGCGGTGAACGTAGCTTTCGTAAGCGCCGAAGATTCAATTAAAGAT TTCCG
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Coding sequence (CDS) from alignment at C-linearis_contig79:98774..104928+

>mRNA_C-linearis_contig79.15386.1 ID=mRNA_C-linearis_contig79.15386.1|Name=mRNA_C-linearis_contig79.15386.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at C-linearis_contig79:98774..104928+ (Chordaria linearis ClinC8C monoicous)
ATGCTTCCGAGTAGCGTGGGCAGCAGGTACGCTTCTCACCGACATGGGTC
ATCATACGGGCAGTCGATGTCGGTGTCGTGGAGCCTTCCGGACTACTTAC
GACGGATGTTTGATTACCACCAGATGCTTCCGAGTAGCGTGGGCAGCAGG
TACGCTTCTCACCGACATGGGTCATCATACGGGCAGTCGATGTCGGTGTC
GTGGAGCCTTCCGGACTACTTACGACGGATGTTTGATTACCACCAGATGG
ATATGGAGGCGACGGCAGATCAAATGGTGACCCTCTTGAGCGTCAACCCC
CAGAGAGTATGGATATGGAGGCGACGGCAGATCAAATGGTGACCCTCTTG
AGCGTCAACCCCCAGAGAGTGTACAAGACGGCGTACTACCGAAAACGTAC
AAGACGGCGTACTACCGAAAACAAACAAGAAACCACTGGGCAAGAGACGA
TCCGGGGTTTGCAGTCCTGCAGGCGTTTTTTCTTGTGAAACAAGAAACCA
CTGGGCAAGAGACGATCCGGGGTTTGCAGTCCTGCAGGCGTTTTTTCTTG
TGGTGGCGACATTCGCCTTCGGCGTGGCGTTTGGCGCTAGAGGCGTCTGG
ACGTACGTGGGGTTGTTATTGCACTCGGTGGGGGTACACTGGCTGCTGTG
TGGGGTGGTGATGTCATCGTTCTGCAGGTGGCGACATTCGCCTTCGGCGT
GGCGTTTGGCGCTAGAGGCGTCTGGACGTACGTGGGGTTGTTATTGCACT
CGGTGGGGGTACACTGGCTGCTGTGTGGGGTGGTGATGTCATCGTTCTGC
AGGTGGATAGCAAACAGCCGCTTACTGCAGCACCGGTCTCATTCCGTGGA
GCAAGAGGTGGAGTGGATGTACGCCCTGGACATCCATAGCAACTCGTTCT
TCCCGCTCTTCGTGTGGCTCTACGTGGTGCAGGTGGATAGCAAACAGCCG
CTTACTGCAGCACCGGTCTCATTCCGTGGAGCAAGAGGTGGAGTGGATGT
ACGCCCTGGACATCCATAGCAACTCGTTCTTCCCGCTCTTCGTGTGGCTC
TACGTGGTGCAGCTCCTGCTGCTGCCTCTGCTGGTGGGGCAGTCGGTGTG
GTCCCTCGTGTTGTCCAACACTCTCTACGCCGTGGCCTTCTCCATGTACT
TTTATGTTACTCACCTGGGCTATCGATCTCCTGCTGCTGCCTCTGCTGGT
GGGGCAGTCGGTGTGGTCCCTCGTGTTGTCCAACACTCTCTACGCCGTGG
CCTTCTCCATGTACTTTTATGTTACTCACCTGGGCTATCGATCACTCCCC
TTCTTACACACGACGGAGGTCTTCCTTTATCCGGTGGTCGGCATCATCAT
GCTGCTCCTTCTATCCATTTTTCTCTTGCCCTTTGGGGTTCGCGTCAATG
CCACCCTCACCGTTGCAAAAATGTATTTCCTCGATTGACACTCCCCTTCT
TACACACGACGGAGGTCTTCCTTTATCCGGTGGTCGGCATCATCATGCTG
CTCCTTCTATCCATTTTTCTCTTGCCCTTTGGGGTTCGCGTCAATGCCAC
CCTCACCGTTGCAAAAATGTATTTCCTCGATTGA
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