mRNA_C-linearis_contig78.15371.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig78.15371.1 vs. uniprot
Match: A0A6H5KMD6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMD6_9PHAE) HSP 1 Score: 614 bits (1583), Expect = 5.140e-210 Identity = 340/493 (68.97%), Postives = 381/493 (77.28%), Query Frame = 1
Query: 61 RGSSTLAAIFAVLVAGCSRSPTCDAFLVPAGAPTGT--WTASTLVQQGRFSVPWRRRHHHSPGSNLAVPRTAATNNKFSTFKRVRGAGCMGMLAGPPAAVGSVVNPAVVKASSRAVGELLCCCILGIVAAKKGILTPVNVAALSKIVYGIFLPALLMVNVAKTIISQPVASLLPIPVFAAIQIAVGLVISGAAMRLLNIDPNTEMGRETKVCGAFQNSGILPLIFLNAMFRGSPELLTRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEPAGGKKEPIVGGG---------SGIPKAKVSLSERAASFPAKVKSIAAGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFSNLTAAYTPSGVLVLAGSLANCPPGKWFTKDTGKTILAVGMARWLLLPLVTSGLLLGGVKYGLVPQDPMLLFVLLIESCMPSAQNSVIMLQVVGLQDAAGRCARMLCTLYLVSIVPVSILLTIFISALKLV 1506
R +STLAA+F +LVA R+P+C F+ P TG WT ++ G P V A K + G + M AG PAAV S++NP VVKAS+RAV ELLCCC+LG+VAAKKGILTPVNVAALSKIVYGIFLP+LLMVNVAKT +SQ VASLLPIP FA IQ+A+GL IS AMRLL I+P+TE GRE KVC AFQNSGILPLIFLNAMFRGSPELL+RGVAY SFYLMGWSPTFWTIGN ILTGHL + + +PKAK+SLS+R A+ P+KVKSIA PT R++LSPPI+AC+ GLVIGLSPPLRWLLMREGAPLGPMW+AFSNLTAAYTPSGVLVLAGSLANCPPGKWF++DT KTILAVGMARW LLPL TSGLL GGVKYGLVP DPMLLFVLLIESCMPSAQN+VIMLQV GLQ+AAGR AR LCTLYL+SIVPVSILLT+FI+ALKLV
Sbjct: 49 RSTSTLAAVFVLLVASL-RAPSCQGFVAPLATRTGIRGWTG---IRGG-------------PSLARVVVDKEARTTKLGRLRVPGGGHSLTMSAGLPAAVSSMINPVVVKASTRAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSVASLLPIPAFAGIQVALGLAISEVAMRLLRINPDTEAGREAKVCMAFQNSGILPLIFLNAMFRGSPELLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQDGXXXXXXXXXXXXXXXXXXXVAAVPKAKLSLSKRVANLPSKVKSIAESPTVRRVLSPPIVACMMGLVIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPPGKWFSRDTQKTILAVGMARWFLLPLATSGLLFGGVKYGLVPPDPMLLFVLLIESCMPSAQNTVIMLQVAGLQEAAGRKARTLCTLYLISIVPVSILLTVFIAALKLV 524
BLAST of mRNA_C-linearis_contig78.15371.1 vs. uniprot
Match: A0A836CLT3_9STRA (Auxin efflux carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT3_9STRA) HSP 1 Score: 387 bits (994), Expect = 1.040e-123 Identity = 213/381 (55.91%), Postives = 272/381 (71.39%), Query Frame = 1
Query: 364 VNPAVVKASSRAVGELLCCCILGIVAAKKGILTPVNVAALSKIVYGIFLPALLMVNVAKTIISQPVASLLPIPVFAAIQIAVGLVISGAAMRLLNIDPNTEMGRETKVCGAFQNSGILPLIFLNAMFRGSPE--LLTRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEPAGGKKEPIVGGGSGIPKAKVSLSERAASFPA--KVKSIAAGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFSNLTAAYTPSGVLVLAGSLANCPPGKWFTKDTGKTILAVGMARWLLLPLVTSGLLLGGVKYGLVPQDPMLLFVLLIESCMPSAQNSVIMLQVVGLQDAAGRCARMLCTLYLVSIVPVSILLTIFISA 1494
+ P VV +S RAV ELL CC+ G+ AAKKG+LTP NV+ALS+IVY IFLP+LL+VNVA+T ISQP+++LLPIP+FA QI +G I+ M++L I+P TE GRE +VC AF NSGILPL+F+NA+FR P+ +L R +AY+SF+LMGWSP FWT+G LT + EP ++EP + GS A A K ++ A P ++ILSPPI+ACL GL +G+S PLRWLL APL +W + L AAYTPSG+LVLAGSLAN P +TK T K I A+ MARWLLLP+ T LLLG VK +VP+DP LLFVL++E+ MP AQNSVI+LQV GL++AAGR AR LC YLV ++P+S LLT+F+ A
Sbjct: 6 LQPTVVASSVRAVAELLTCCVFGVTAAKKGVLTPTNVSALSQIVYNIFLPSLLLVNVAETAISQPLSTLLPIPLFAWAQIFIGYKIARLTMKVLRIEPTTEEGREVQVCSAFGNSGILPLLFVNALFRAHPDPTVLPRAIAYISFFLMGWSPAFWTVGYRTLTTGI-EPEN-EEEPALAAGSTATAAGSQXXXXXXXXQALSKAQTALASPALKRILSPPIVACLVGLTVGISSPLRWLLTDSNAPLAFLWNSIKVLAAAYTPSGILVLAGSLANAKPQNIWTKATAKKIAAISMARWLLLPIATGALLLGCVKARIVPRDPALLFVLMMEAAMPPAQNSVIILQVSGLRNAAGRIARSLCIFYLVGVLPISALLTVFLQA 384
BLAST of mRNA_C-linearis_contig78.15371.1 vs. uniprot
Match: W7TA92_9STRA (Auxin efflux carrier-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA92_9STRA) HSP 1 Score: 226 bits (575), Expect = 1.500e-61 Identity = 159/404 (39.36%), Postives = 230/404 (56.93%), Query Frame = 1
Query: 355 GSVVN--PAVVKASSRAVGELLCCCILGIVAAKKGILTPVNVAALSKIVYGIFLPALLMVNVAKTIISQPVASLLPIPVFAAIQIAVGLVISGAAMRLLNIDPNTEMGRETKVCGAFQNSGILPLIFLNAMFRGSPE--LLTRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEPAG---GKKEPIVGGGSGIPKAKVSLSERAASF----PAKVKSIAAGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFSNLTAAYTPSGVLVLAGSLA-NCPPGKWFTKDTGKT---------ILAVGMARWLLLPLVTSGLLLGGVKYGLVPQDPMLLFVLLIESCMPSAQNSVIMLQVVGLQDAAGRCARMLCTLYLVSIVPVSILLTIFISALKL 1503
GSV N P VVKAS AVGELL C +G ++GIL +A LS IVY I LP+LL+VNVAKT+ + P+ +LLP+P+F +QI + I+ L+ D N+ GR+ +V F N G+ P++F + R P+ +L ++Y+SFYL+GW+P FWT G ++L + P +KE +V +L++R F PA +K +ILSPPI+ L GL +G+SP L L + APLG + A + +AYT G+LVLAGSLA P + +G I +V + R+ L P + ++L + G V D +++FVL ++SCMPSAQNSV+M+Q+ G Q A R ARML +Y +S +P+SILLT+F+ L
Sbjct: 102 GSVANLDPVVVKASLTAVGELLVACGIGAWFTRRGILGREAIANLSSIVYHILLPSLLVVNVAKTVYTTPLRTLLPLPLFGTMQILLCSCIAWVVTFLMGADVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGYSLLV-PAEAPTAQSIAEKESVV-----------TLADRIKYFIRHPPATIK---------RILSPPIVGSLGGLCVGVSP-LAKLFLGPRAPLGILTNAVQTIGSAYTSMGLLVLAGSLALPLPTPSPLEEVSGAESKSIHPYLQIASVCLVRFCLCPALCLSIILRAMSTGWVKLDRLMVFVLFLQSCMPSAQNSVLMVQLSGRQADATRLARMLLYIYSLSCIPISILLTLFLQNFSL 483
BLAST of mRNA_C-linearis_contig78.15371.1 vs. uniprot
Match: A0A7S1TU85_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU85_9STRA) HSP 1 Score: 216 bits (550), Expect = 7.710e-59 Identity = 148/402 (36.82%), Postives = 221/402 (54.98%), Query Frame = 1
Query: 346 AAVGSVVNPAVVKASSRAVGELLCCCILGIVAAKKGILTPVNV---AALSKIVYGIFLPALLMVNVAKTIISQ----PVASLLPIPVFAAIQIAVGLVISGAAMRLLNIDPNTEMGRETKVCGAFQNSGILPLIFLNAMFRGSPE--LLTRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEPAGGKKEPIVGGGSGIPKAKVSLSERAASFPAKVKSIAAGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFSNLTAAYTPSGVLVLAGSLANCPP---------GKWFTKDTG-------KTILAVGMARWLLLPLVTSGLLLGGVKYGLV-PQDPMLLFVLLIESCMPSAQNSVIMLQVVGLQDAAGRCARMLCTLYLVSIVPVSIL 1473
A +G+++NPAV++AS +AV L+ C +LG + A G P++ A LS+++Y + PALL+ +VA TI A L +P FAA+QIA G ++ + L + +E ++C F NSG LPL+ ++A FR P+ LL V YVSFYL+GWSP FWT + I EP K V A+ E+ + A A+ P +++LSPPI+ C++GL I P L L + AP P+ A + + Y P VLVLAGS AN W K G K +L++ AR+L++P V G++ G + GLV P + +L F+LL+E CMPSAQNSV++L + G +D AGR A+ + LY+++I+P+++L
Sbjct: 12 AGMGNLMNPAVLQASIKAVSSLVACVVLGTLVAGPG--KPLDAEACATLSRLIYNVLQPALLLTSVATTITRAGGIGAAAQLFVLPAFAALQIAAGAILGLGLVSLFGWRKSGTNAKELQICSTFGNSGPLPLLLVDAFFRNHPDPTLLPAAVGYVSFYLLGWSPAFWTFASAIAA--TPEPKSAAKPQAV--------AEAEAGEKKSPLKAFTDWYAS-PWGKRMLSPPIIGCMSGLTIASVPLLSTLFLGPTAPFSPLTDAIRTIGSGYLPCVVLVLAGSFANSAARGGAAGEVASSWEAKVAGMQRARQTKALLSILCARFLIMPAVALGMMTGLTQLGLVSPTNHLLRFILLMEGCMPSAQNSVVILSMNGDKDGAGRMAKTIAALYILAIMPMTLL 400
BLAST of mRNA_C-linearis_contig78.15371.1 vs. uniprot
Match: W7U1P2_9STRA (Membrane transporter n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1P2_9STRA) HSP 1 Score: 216 bits (550), Expect = 4.400e-58 Identity = 148/385 (38.44%), Postives = 210/385 (54.55%), Query Frame = 1
Query: 361 VVNPAVVKASSRAVGELLCCCILGIVAAKKGILTPVNVAALSKIVYGIFLPALLMVNVAKTII--SQPVASLLPIPVFAAIQIAVGLVISGAAMRLLNIDPNTEMGRETKVCGAFQNSGILPLIFLNAMFR---GSPELLTRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEPAGGKKEPIVGGGSGIPKAKVSLSERAASFPAKVKSIAAGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFSNLTAAYTPSGVLVLAGSLA------NCPPGKWFTKDTGKTILAVGMARWLLLPLVTSGLLLGGVKYGLVPQ-DPMLLFVLLIESCMPSAQNSVIMLQVVGLQDAAGRCARMLCTLYLVSIVPVSILLT 1479
V+ P K S AV L+ C LG+ AA G+L +++ LS++++ F PALL NVA T+ S +SLL +P FA +QI G + L +DP ++ G+E VC AF NSG LPL+F +A FR P L R VAY+SFYL+ WSP FWT+G+TIL +PA K P P +L R P RK LSPP + CL G ++G +P LR + APL ++ A + +AY P+ +LVLAGSLA N ++ TG A+ AR+ L+P LL G + L+P DP+L FVLL+++CMP AQN+V++LQ+ AA A ++ +YL ++VP+ +LL+
Sbjct: 111 VIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPPS-------PSPSPTLPSRLLHH----------PLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSR-TG----AICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLS 473
BLAST of mRNA_C-linearis_contig78.15371.1 vs. uniprot
Match: A0A4D9D5S5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S5_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.450e-57 Identity = 145/434 (33.41%), Postives = 234/434 (53.92%), Query Frame = 1
Query: 385 ASSRAVGELLCCCILGIVAAKKGILTPVNVAALSKIVYGIFLPALLMVNVAKTII--SQPVASLLPIPVFAAIQIAVGLVISGAAMRLLNIDPNTEMGRETKVCGAFQNSGILPLIFLNAMFRGSPE--LLTRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEPAGGKKEPI---------VGG---GSGIPKAKVSLSERAA---------------------------------------SFPA---------KVKSIAAGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFSNLTAAYTPSGVLVLAGSLANCPPGKWFTKDTGKTILAVGMARWLLLPLVTSGLLLGGVKYGLVP-QDPMLLFVLLIESCMPSAQNSVIMLQVVGLQDAAGRCARMLCTLYLVSIVPVSILLTIFIS 1491
A+S AV L+ CC LG+ A++ +L ++ALS++VY +F P+LL NV + + SQ ++ +P+ AA+QI IS +RL+ ++P +E GRE ++C F N+G LPL+F++A+F+ P+ L TR VA++SFYL+ WSP FW G IL ++ G K +P+ VGG GSG A + ++ + S+P+ K + +A +K+L+PP + C G ++G+ PLR LL + AP +++A + +AY P +L+L+GSLA G F + + + V R+ ++P V + G + GL+P QDP+LLFV+L++ CMPSAQNSV++LQ+ AA AR++ T+Y++SI+PV +L+ +S
Sbjct: 25 AASGAVLNLVACCCLGVTASRYRVLDQQALSALSRLVYNVFQPSLLFTNVLQILATPSQARGTIFLLPLAAAVQIVTAAGISRVLLRLVGLNPFSEAGREVRICSTFANAGPLPLLFVDALFKNHPDPTLRTRAVAFISFYLLAWSPLFWNYGYGILVDKTEDTGGKKGQPMEYSSLGTQSVGGPRLGSGTGGAGMMVNGNGSAAAMVLEEGVDGKETHATNWTSPHQQQYSRQQVPCSEGRSYPSHALVRSALEKARRVAHSRAMKKLLNPPTLGCTLGALVGVCSPLRGLLFGDTAPFSCVFSALRTMGSAYVPCVLLILSGSLAQGLEG--FDSNVFRRAMLVMFQRFCIMPAVAFACVETGKRTGLLPTQDPLLLFVILLQGCMPSAQNSVLILQLERRPQAAASIARLISTVYILSILPVGMLIRTLLS 456
BLAST of mRNA_C-linearis_contig78.15371.1 vs. uniprot
Match: A0A7S2SS74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS74_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.030e-55 Identity = 143/382 (37.43%), Postives = 218/382 (57.07%), Query Frame = 1
Query: 385 ASSRAVGELLCCCILGIVAAKKGILTPVNVAALSKIVYGIFLPALLMVNVAKTIIS--QPVASLLPIPVFAAIQIAVGLVISGAAMRLLNIDPNTEMGRETKVCGAFQNSGILPLIFLNAMFRG--SPELLTRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEPAGGKKEPIVGGGSGIPKAKVSLSE--RAASFPAKVKSIAAGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFSNLTAAYTPSGVLVLAGSL-----------ANCPPGKWFTKDTGKTILAVGMARWLLLPLVTSGLLLGGVKYGLVPQDPMLLFVLLIESCMPSAQNSVIMLQVVGLQDAAGRCARMLCTLYLVSIVPVSILLT 1479
AS+ AV +L+ LG AA + +L + LS++++ IF PALL VNVA T+ + Q +++L IP+FA QIAVG ++ + +L + + GRE ++ AF NSG LPL+F +++F G P + +R VA++SFYL+GWSP FWT G IL+ P K S E R S K ++ P +++ILSPP++ C+ G VIG SP LR L + L P+ A L +AY P+ +L LAG+L A + T G + A+ +AR+L+ P+ G+L GL+P DP+L FVLL+++CMPSAQNSV++LQ+ ++AAG A+ L LY+++ +P+++LL+
Sbjct: 87 ASASAVSKLIAVVSLGFWAADRKVLDANACSVLSRLIFFIFQPALLCVNVATTLSTPGQSLSTLGIIPLFALSQIAVGSLVGSLLLAVLRVPRESIPGRELRMSCAFGNSGPLPLLFADSLFAGRADPTMASRAVAFISFYLLGWSPMFWTYGRNILS---------------------PLEKSSSVEVGRDMSIKDKFWALLNDPNSQRILSPPVLGCVLGAVIGSSPQLRSLFIGTAPALKPVTDALRTLGSAYVPAVILTLAGTLHQSVRSPSAVAAASNDKEEKTVSLGSRVAALMVARFLITPVTAYGMLRVCSHAGLIPADPLLRFVLLMQACMPSAQNSVVILQLENKKEAAGSMAKTLSVLYILACLPIALLLS 447
BLAST of mRNA_C-linearis_contig78.15371.1 vs. uniprot
Match: A0A5J4YJ85_PORPP (Protein PIN-LIKES 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJ85_PORPP) HSP 1 Score: 199 bits (507), Expect = 2.950e-52 Identity = 135/379 (35.62%), Postives = 211/379 (55.67%), Query Frame = 1
Query: 361 VVNPAVVKASSRAVGELLCCCILGIVAAKKGILTPVNVAALSKIVYGIFLPALLMVNVAKTIISQPVASLLPIPVFAAIQIAVGLVISGAAMRLLNIDPNTEMGRETKVCGAFQNSGILPLIFLNAMFRGSPELLTRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEPAGGKKEPIVGGGSGIPKAKVSLSERAAS-FPAKVKSIAAGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFSNLTAAYTPSGVLVLAGSLANCPPGKWFTKDTG--------KTILAVGMARWLLLPLVTSGLLLGGVKYGLVPQDPMLLFVLLIESCMPSAQNSVIMLQVVGLQDAAGRCARMLCTLYLVSIVPVSI 1470
+V V++ S A +LL ++G A K+G+L+ ++ALS VY IFLP++L N+ +T+ ++S+ +P+ A QIA G + S A RL ID +++ G+ V AF NS LPL+F N +F P V+ +SF+L+GWSP FW+IG I+ G + G + A SL+ A + A+++ + P ++ +PPI+ L+GL++G P LR + +GAPLG ++ + S L AAY P VLVLAGSLA+ K D K I AV R+ L+PL G L+ + P+L F +L+ES MP+AQN+V+MLQ+ +AA R A +L +Y+++++P+S+
Sbjct: 91 LVRGDVLQISVIATAKLLVTILIGGFAQKRGVLSKQVLSALSASVYNIFLPSVLFCNMVQTLAKHSLSSVGLVPLLALAQIAFGWLCSILACRLFRIDTHSDAGKFVTVSCAFGNSAALPLLFANNLFAADPVRQAGLVSGISFFLLGWSPLFWSIGYMIMAGEASTKSAGATQ----------LAAPSLNADARTGIRARIQQLVRHPMVARVFAPPIVGALSGLLVGSIPVLRRAFLADGAPLGILFESLSGLGAAYVPCAVLVLAGSLASNVGKKKQDGDVSAGISAEDLKQIAAVSFVRFCLVPLFAVGSLIATRRVLGATLRPILQFTILLESVMPAAQNTVLMLQLENKPEAASRVATLLLYIYILAVIPISL 459
BLAST of mRNA_C-linearis_contig78.15371.1 vs. uniprot
Match: A0A8J6CA09_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA09_DIALT) HSP 1 Score: 198 bits (503), Expect = 5.120e-52 Identity = 146/411 (35.52%), Postives = 213/411 (51.82%), Query Frame = 1
Query: 358 SVVNPAVVKASSRAVGELLCCCILGIVAAKKGILTPVNVAALSKIVYGIFLPALLMVNVAKTIISQPVA-SLLPIPVFAAIQIAVGLVISGAAMRLLNIDPNTEMGRETKVCGAFQNSGILPLIFLNAMFRGSP----ELLTRGVAYVSFYLMGWSPTFWTIGNTILTGHLDEPAGGKKEPIVGGGSGIPKAKVSLSERAASFPAKVKSIAAGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGPMWAAFSNLTAAYTPSGVLVLAGSLAN-------CPPGKWFTKDTGK--------------TILAVGMARWLLLPLVTSGLLLGGVKYGLVPQ---DPMLLFVLLIESCMPSAQNSVIMLQVVGLQDAAGRCARMLCTLYLVSIVPVSILLTIFISALKL 1503
++ +PAV S+ AV EL LG A + G+L V L++IVY FLP L +V +T+ + V+ +L +P+ +AIQIA GL ++ +R L I P R C AF N+G+LPL+ A+FR P +L R +Y+SFYL+GWSP FW++G +ILTG D A G EP R F AR+++SPPI+ L GL GL P ++L +PL + A N+ AY P+ +LVLAGSLA P + D G+ +L + R++L PL+ GL+ ++P DP+L F LL+ S MP AQNSV+MLQV G Q A + +R+L +Y ++ VP+S+LL++F+ + L
Sbjct: 61 TLFSPAVFATSAGAVAELAVSAGLGYAAVRSGLLERSGVTQLARIVYNFFLPIFLFASVTRTVQTYGVSRGMLALPLVSAIQIACGLSVARLLLRALGISPALRSSRRFVTCAAFGNTGVLPLVLAEAIFRSPPYADATVLPRAASYLSFYLLGWSPIFWSLGKSILTGDGDVAAAG--EP-----------------RWRQF------------ARRVISPPIIGALGGLAFGLLCP-SFVLESPRSPLRIVMQALRNIARAYPPAALLVLAGSLAGDAPVSAKAGPEQAAPMDAGRGADAQAPREMGMPTMLLGITAFRFVLSPLIALGLVRALSALRVLPSVSADPLLTFALLLNSAMPPAQNSVLMLQVAGDQKGATQMSRVLFVVYALAAVPISVLLSVFLQRVGL 439
BLAST of mRNA_C-linearis_contig78.15371.1 vs. uniprot
Match: R1CQU2_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CQU2_EMIHU) HSP 1 Score: 197 bits (501), Expect = 2.290e-51 Identity = 134/404 (33.17%), Postives = 220/404 (54.46%), Query Frame = 1
Query: 364 VNPAVVKASSRAVGELLCCCILGIVAAKKGILTPVNVAALSKIVYGIFLPALLMVNVAKTIISQPV-ASLLPIPVFAAIQIAVGLVISGAAMRLLNIDPNTEMGRETKVCGAFQNSGILPLIFLNAMFRGSPELLTR--GVAYVSFYLMGWSPTFWTIGNTILTGHLD-EPAGGKKEPIVGGGSGIPKAKVSLSER-------------AASFPAKVKSIAAGPTARKILSPPIMACLAGLVIGLSPPLRWLLMREGAPLGP-------MWAAFSNLTAAYTPSGVLVLAGSLA----NCPPGKWFTKDTGKTILAVGMARWLLLPLVTSGLLLGGVKYGLVPQDPMLLFVLLIESCMPSAQNSVIMLQVVGLQDAAGRCARMLCTLYLVSIVPVSILLTIFIS 1491
VNP +++ + ++ ELL C +G A K G L+ + +L+ +V+ +FLPA+L+ +VA T+ Q A+L +P+ A Q+AVG ++ ++ LL + + GR V +F N+G+LPL+F++++FRG+ + TR + V+ +L+GWSP FWT+G +LTGH PA A+ A+++ + A + R+ LSPPI ACLAGLV+G + P ++ L AY+P+ +LVLAGSLA G+ + ++A+ +AR+ +PL++ LL ++ GL+P DP+ VLL++SCMPSAQNSV+ LQV G + A R AR+L +YL++ +PV+ +L++ +
Sbjct: 61 VNPVILRLTRDSMAELLTSCAIGYGATKAGYLSGSQIRSLAGVVFNVFLPAMLLTSVASTVAEQQAGAALAVMPIAAWAQVAVGASVASVSLALLRLPRRSSAGRGVSVLSSFGNAGVLPLLFVSSLFRGAAQEATRRRATSLVAMFLLGWSPLFWTLGYALLTGHAALSPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGAARAARLRQLRA--SLRRALSPPIAACLAGLVVGSAXXXXXXXXXXXXXXXPSLQSWLPLFRCLEALGKAYSPAALLVLAGSLAAPTEQRRAGEGELGASASHVVAIAVARFCAVPLLSFALLHAALRAGLLPADPLRDLVLLLQSCMPSAQNSVLALQVDGSPERAARMARVLLAIYLIAALPVAGILSLLLQ 462 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig78.15371.1 >prot_C-linearis_contig78.15371.1 ID=prot_C-linearis_contig78.15371.1|Name=mRNA_C-linearis_contig78.15371.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=496bp MQRPDQRRRCNAGRGSSTLAAIFAVLVAGCSRSPTCDAFLVPAGAPTGTWback to top mRNA from alignment at C-linearis_contig78:695829..703732+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig78.15371.1 ID=mRNA_C-linearis_contig78.15371.1|Name=mRNA_C-linearis_contig78.15371.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7904bp|location=Sequence derived from alignment at C-linearis_contig78:695829..703732+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig78:695829..703732+ >mRNA_C-linearis_contig78.15371.1 ID=mRNA_C-linearis_contig78.15371.1|Name=mRNA_C-linearis_contig78.15371.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2976bp|location=Sequence derived from alignment at C-linearis_contig78:695829..703732+ (Chordaria linearis ClinC8C monoicous)back to top |