mRNA_C-linearis_contig76.15238.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig76.15238.1
Unique NamemRNA_C-linearis_contig76.15238.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig76.15238.1 vs. uniprot
Match: D7FQR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR2_ECTSI)

HSP 1 Score: 701 bits (1810), Expect = 1.440e-248
Identity = 386/553 (69.80%), Postives = 442/553 (79.93%), Query Frame = 1
Query:    1 DPGQAAMQVRVQDDVADALIQRACLTLCHAAASKSR--ASADRTVRMAT-GTSSTTTPKKSAYPSTWSTGSNIQLMAPKMSDTTDRSLFRRALLAKFDTHGYTHQRGLRRPLFYKSGYLSCTKCNGLTFVDASALRTMLELRGVVDFGNIRPESLPPCVECGETAGLRVGAHDFLSLIEGGKEALARRRRLERMAAKTLQRAFRRHLHIQWRKAEVVRQRTLWLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKANRLLIRHALNHYPHRKRVFWYKNEAEEEQLYADYRMLVQRTGFRPPRIVVEQNIREIGEPLKSTEYT---------------------HQSTRERGGARVSHTGAMERPKRPPLPDRVPEGAKKRAARYRSRRAGQNLLTGYLAERSTTNDHNACTEGIARLRQAYITERQEELTARLMGHSNPKLAGGLKMKAFHESPYGDDVVSELMNHQVWEVMRRNKRLEEKDLERKQRAEWVRLRQLEDPQLAMYFREEMKARNVYVINKLRSDRRALKNVPSALRDHNRNGGRKYEFPE 1587
            D  Q AMQV V DD+ADALIQ A  TL +AA S +   AS+D   R  T GTS+T    KS++PSTWS GS+IQL+ PK+SDTTDRSLFRRA LA FD HGY HQRGLRRPLFYKSGYLSCT+CNG+TF+DASALRT+LEL+ +VDFG +RPE+LPPCV CGETAGLRVGAHDFLSLI+GGKEALARRRRLER+AAK LQRAFRRHLHIQWRK+E+VRQRT+ LLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKA+RLLI+HAL+HYPHRKRVFWYKNEAEE QLYADYRMLV RTGFRPPRIVVEQNIREI   +   E                        +  R     R S    ++R  R           +KR ++ +S++A QN+L  YLA R+T N+ +ACTEG++RLR+AY+TERQEELTARLMGHSNPKLAGGLKMKAF ESPYGDDVVS LMNHQVW+  ++ + LE+KDLER++RAEWVRL+QLEDPQLAMYF+EEM ARNVYVINKLR DRRAL NV SAL+D+NR GGRKY+FPE
Sbjct:   11 DQYQIAMQVLVGDDLADALIQTASSTLRNAATSNANQDASSDDVARTTTNGTSAT----KSSFPSTWSPGSSIQLIPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTQCNGMTFIDASALRTILELKSLVDFGKVRPENLPPCVGCGETAGLRVGAHDFLSLIQGGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKSEIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRIVVEQNIREIATRVLEREAELVGRIQARWRGLSVRRYLVVFRRELRRHREVRASMVFRLQRTVRG-------WSHRKRFSKLKSQKAEQNILGDYLATRATKNNDDACTEGMSRLRRAYVTERQEELTARLMGHSNPKLAGGLKMKAFFESPYGDDVVSGLMNHQVWQAWQQKRDLEQKDLERQKRAEWVRLKQLEDPQLAMYFKEEMTARNVYVINKLRWDRRALNNVASALKDYNRTGGRKYDFPE 552          
BLAST of mRNA_C-linearis_contig76.15238.1 vs. uniprot
Match: A0A7S2R5D9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5D9_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.840e-55
Identity = 170/544 (31.25%), Postives = 271/544 (49.82%), Query Frame = 1
Query:  121 RTVRMATGTSSTTTPKKSAYPSTWSTGSNIQLMAPKMSDTTDRSLFRR----------------------------ALLAKFDTHGYTHQRGLRRPLFYKSGYLSCTKCNGLTFVDASALRTMLELRGVVDFGNIRPESLPPCVECGETAGLRVGAHDFLSLIEGGKEALARRRRLERMAAKTLQRAFRRHLHIQWRKAEVVRQRTLWLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKANRLLIRHALNHYPHRKRVFWYKNEAEEEQLYADYRMLVQRTGFRPPRIVVEQNIREIGEPLKSTEYTHQSTRERGGARVSHTGAMERPKRPPLPDRVPEGA-----KKRAARYRSRRAGQ-NLLTGYLAERSTTNDHNACTE--------GIARLRQAYITERQEELTARLMGHSNPKLAGGLKMKAFHESPYGDDVVSELMNHQVWEVMRRNKRLEEKDLER-------------KQRAEWVRLRQLEDPQLAMYFREEMKARNVYVINKLRSDRRALKNVPSALRDHNRNGGRKYEFPE 1587
            RT RM++G   T        P ++   + + +  P+  DT+DR+L RR                            A   +FD+ G+    GL++ LFY S +L+C+KCN +  +D+   R+   L         R E LP C  CG T    VG+HD    I   +E L    R ++ A   +QR++R +L  QW +AE  R++   +L YR+A +I+A++RGRLGRR  +T   +R++ +A+  L+  A++   +++RVFWYK + + + LY DY +L +RTGF+PPR+VVE+N++EI   ++  E    +  ++    ++    M    R     R  + A     ++    +R RR  + + +  + A+ S    H+   +           +L   Y  ERQEE TARL+G  +P  A G KMKAF++S YG D V++LM             LE +D+E               +R E+VR RQLE   L +Y++EEM+ R+V +I+KL  +R    N    L  HNR G  K+ +P+
Sbjct:   48 RTFRMSSGAVVT-------MPGSYHERNPLAIRNPREDDTSDRTLVRRVGAPPAPPSSAVAHEPPQMTCLPARSKAADAIRFDSSGFNTGIGLQKDLFYWSPFLTCSKCNNMAIIDSMNARSFSGLMQTSLAKTARAEPLPKCSVCGSTQDWWVGSHDLTKFIGASREELEALLRRQKKAVVVIQRSYRFYLRRQWGRAERQRKKIRAMLEYRAASIIEALIRGRLGRRKAKTTVSIRIIMRAHSKLVSRAVSDRSYKRRVFWYKPD-QLKILYLDYVVLCERTGFQPPRVVVEENLKEIARRIRIREAFLTTLVQKRWRGITVRRFMVVYMREVFRIRELQCAAAFKIQRLVHGFRGRRYVEAHKINVFKAKMSKEYMHSKHVQLESQDKAAQKVKLANHYAKERQEERTARLVGLVHPGAADGHKMKAFNQSAYGTDSVTDLM-------------LELRDMENDTVTRETQETNDVSERGEFVRQRQLEGRALKLYYKEEMRQRSVELIDKLTKER-PQSNAAKLLAAHNRKGI-KFNYPK 568          
BLAST of mRNA_C-linearis_contig76.15238.1 vs. uniprot
Match: F0YRG3_AURAN (Expressed protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YRG3_AURAN)

HSP 1 Score: 159 bits (403), Expect = 4.910e-41
Identity = 107/277 (38.63%), Postives = 161/277 (58.12%), Query Frame = 1
Query:  154 TTTPKKSAYPSTWSTGSNIQLMAPKMSDTTDRSLFRRALLAKFDTHGYTHQRG-----LRRPLFYKSGYLSCTKCNGLTFVDASALRTM-LELRGVVDFGNIRPESLPPCVECGETAGLRVGAHDFLSLIEGGKEALARRRRLERMAAKTLQRAFRRHLHIQWRKAEVVRQRTLWLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKANRLLIRHALNHYPHRKRVFWYKNEAEEEQLYADYRMLVQRTGFRPPRIVVEQNIREIGEPLKSTEYT 966
            T T K  A P++++ GS++ L+ PK+ DT+DRSL         +T   T + G     L RP+FY + Y++C KCN L F+DA+ +R+    + G +   +   E+L  C  C  TA   +GAHDFL  I G K  L ++ ++   AA  L R++R +L  Q  +A   R++    L+   A +I+A+LRGRLGRR   T  +L  V+KA+ + +  AL+     K VFWYK++ +   L+ DY +LV+RTGF PPR VVE NI+EI   +K+ E+T
Sbjct:   35 TATEKAMALPTSFTRGSSMNLVTPKLVDTSDRSLV--------ETFSKTFRDGRKESDLERPMFYLTPYITCDKCNTLMFIDAAKVRSFSARMPGGICEVSAGDETLGVCPSCASTANFCLGAHDFLGKIAGSKAELIKQIKIRHAAAFLLGRSYRFYLRRQCARACRTREKVWAYLQRLCAAIIEAVLRGRLGRRKARTCAYLNYVQKAHPISLSKALSLGGEFK-VFWYKSKEQIRLLFNDYLVLVERTGFVPPRYVVEANIQEIARRIKAREHT 302          
BLAST of mRNA_C-linearis_contig76.15238.1 vs. uniprot
Match: A0A8J2X0I4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0I4_9STRA)

HSP 1 Score: 164 bits (414), Expect = 5.170e-40
Identity = 151/471 (32.06%), Postives = 219/471 (46.50%), Query Frame = 1
Query:  166 KKSAYPSTWSTGSNIQLMAPKMSDTTDRSLFRRALLAKFDTHGYTHQRGLRRPLFYKSGYLSCTKCNGLTFVDASALRTMLELRGVVDFGNIRPES----------LPPCVECGETAGLRVGAHDFLSLIE----GGKEALARRRRLERMAAKTLQRAFRRHLHIQWRKAEVVRQRTLWLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKANRLLIRHAL----------NHYPHRKRVFWYKNEAEEEQLYADYRMLVQRTGFRPPRIVVEQNIREIGEPLKSTE------------------------YTHQSTRERGGARVSHTGAMER---PKRPPLPDRVPEGAKKRAARYRSRRAGQNLLTGYLAERSTTNDHNACTEGIARLRQAYITERQEELTARLMGHSNPKLA---GGLKMKAFHESPYGDDVVSELMNHQVWEVMRRNKRLEEKDLERKQRAEWVR 1416
            K +A PS+++  S + L+   M DTTDR L + A   +F   G T +R +++PLFY + +++C+KCN + F+DA+  R          FG   PES          L  C  C  T  L VGAHDF+  IE    G +EA+A+  +  + AA  L   +R +L  Q  +A   RQ+  + L +R A ++++  RGRLGRR   T + LR +K  + + ++ AL                K+VFWY  + + + LY DY +L QRTGF PPRI+VEQNI EI   ++  E                        Y     RE         G + R    ++  +P R+       A   R +R  Q     Y  ER    D        +RLRQ Y  ER EE TAR  G  NP  A   GG KM AF +S YG D V       +  +   + R++ +  E++ R +W+R
Sbjct:   37 KATALPSSFTRDSEMHLVDQHMIDTTDRHLVK-AFCEQFRP-GAT-ERDMQKPLFYLTPFITCSKCNSILFIDAANARC---------FGAPVPESVRLKRGGNETLAVCPGCAMTENLEVGAHDFMEDIEDASLGAREAMAKEMKKRKRAASLLIMVYRFYLRRQLARAARTRQKCRYYLYHRCASIVESAARGRLGRRRARTFENLRYIKNRHPISLKKALAQKFEVDKRTGESKRLKKVFWYHTKVQLDCLYRDYFILCQRTGFVPPRIIVEQNIEEIARRIRVREEYLITLIQALYRGIILRKCLEIYKYEIIRIREIRAQSCFRIGTIWRGYVARKLRVPARI-------AQVLRRKRPEQ-----YARERREKRDRIRAKAARSRLRQLYEKERAEEATARASGLVNPNNAPGGGGKKMAAFLDSAYGSDDVRRGGRQLLDGIAEYDARIQREKEEKQARKDWLR 483          
BLAST of mRNA_C-linearis_contig76.15238.1 vs. uniprot
Match: A0A836CFY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFY4_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.880e-39
Identity = 123/350 (35.14%), Postives = 165/350 (47.14%), Query Frame = 1
Query:  208 IQLMAPKMSDTTDRSLFRRALLAKFDTHGYTHQRGLRRPLFYKSGYLSCTKCNGLTFVDASALRTMLELRGVV-------------------------------------------DFGNI----------RPES------------------------------------------------------LPPCVECGETAGLRVGAHDFLSLIEGGKEALARRRRLERMAAKTLQRAFRRHLHIQWRKAEVVRQRTLWLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKANRLLIRHALNHYPHRKRVFWYKNEAEEEQLYADYRMLVQRTGFRPPRIVVEQNIREI 936
            +QL+ P+ +D TD+SL RRA  A FD  G+  +RGLRR LFY SG+++C  CN +TFVDA+ALRT + LRG                                             D G +          RP+S                                                      LP C  CG TA LRVG  DF   I  G   LA+R    R AA  +QRA+R +L ++  +A  VR  T  LL YR A+ +QA++RGRLGRRV  T++ LRV+   +  ++  AL+  P R+R+FWY  +AE++ L+ADY  LV+RTGFRPPR +VE NI E+
Sbjct:   16 VQLVPPQQNDCTDQSLPRRAEGA-FDACGFAERRGLRRSLFYVSGFVTCAACNAVTFVDAAALRTAMHLRGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPASSDAGAVAAVGGSATAGRPQSPRHSRQQPALNAAPAAAHSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGAAPAEALPVCSGCGLTATLRVGVRDFTHDIAQGHVDLAQRAARRRGAAAVVQRAYRSYLAVRRDRALRVRLLTKHLLEYRCARAVQAVMRGRLGRRVARTQRHLRVLAGCHPAVLHWALHGCPERRRLFWYHIKAEQDLLFADYVALVERTGFRPPRGLVEANIAEL 364          
BLAST of mRNA_C-linearis_contig76.15238.1 vs. uniprot
Match: A0A7S1U287_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U287_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.380e-18
Identity = 85/239 (35.56%), Postives = 113/239 (47.28%), Query Frame = 1
Query:  709 RLGRRVFETEKWLRVVKKANRLLIRHALN--------------HYPHRKRVFWYKNEAEEEQLYADYRMLVQRTGFRPPRIVVEQNIREIGEP---LKSTEYTHQSTRERGGARVSHTGAMERPKRPPLPD----------RVPEGAKKRAARYRSRRAGQNL-----LTGYLAERSTTNDHNACTEGIARLRQAYITERQEELTARLMGHSNPKLAGGLKMKAFHESPYGDDVVSELM 1329
            RL +R  + E+ L+V+K A+ +++  AL                 P  K+VFWY+   E + LYADYR+LV RTG++PP  +VE NI EI      L +   T    R RG   V     + R +   L +          R   GA+ R    R R A +N           AE     D +   +    LR  Y  ER EE TARL+G ++P LAGG KMKAF+ES YG D VS  M
Sbjct:   14 RLAQRALQVERDLKVIKGAHAIVLSRALRAKDFPLTAEDKARGEPPPPKKVFWYRTRQEVDLLYADYRILVDRTGYQPPLFMVENNIHEIARRCNILIAAYATRVQARWRG-LTVRKFLKIFRRECVRLREFRSACVMKIQRCYRGARARRCATRMRTANKNAKEQAAYAALRAEEKREKDEHLYKDI---LRNRYKKERAEERTARLIGLTHPGLAGGNKMKAFYESSYGSDEVSTRM 248          
BLAST of mRNA_C-linearis_contig76.15238.1 vs. uniprot
Match: A0A7S1U265_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U265_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.030e-17
Identity = 85/239 (35.56%), Postives = 113/239 (47.28%), Query Frame = 1
Query:  709 RLGRRVFETEKWLRVVKKANRLLIRHALN--------------HYPHRKRVFWYKNEAEEEQLYADYRMLVQRTGFRPPRIVVEQNIREIGEP---LKSTEYTHQSTRERGGARVSHTGAMERPKRPPLPD----------RVPEGAKKRAARYRSRRAGQNL-----LTGYLAERSTTNDHNACTEGIARLRQAYITERQEELTARLMGHSNPKLAGGLKMKAFHESPYGDDVVSELM 1329
            RL +R  + E+ L+V+K A+ +++  AL                 P  K+VFWY+   E + LYADYR+LV RTG++PP  +VE NI EI      L +   T    R RG   V     + R +   L +          R   GA+ R    R R A +N           AE     D +   +    LR  Y  ER EE TARL+G ++P LAGG KMKAF+ES YG D VS  M
Sbjct:   14 RLAQRALQVERDLKVIKGAHAIVLSRALRAKDFPLTAEDKARGEPPPPKKVFWYRTRQEVDLLYADYRILVDRTGYQPPLFMVENNIHEIARRCNILIAAYATRVQARWRG-LTVRKFLKIFRRECVRLREFRSACVMKIQRCYRGARARRCATRMRTANKNAKEQAAYAALRAEEKREKDEHLYKDI---LRNRYKKERAEERTARLIGLTHPGLAGGNKMKAFYESSYGSDEVSTRM 248          
BLAST of mRNA_C-linearis_contig76.15238.1 vs. uniprot
Match: A0A329SZ32_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SZ32_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.220e-17
Identity = 73/214 (34.11%), Postives = 104/214 (48.60%), Query Frame = 1
Query:  343 YLSCTKCNGLTFVDASALRTMLELRGVVDFGNIRP-----ESLPPCVECGETAGLRVGAHDFLSLIEGGKEALARRRRLERMAAKTLQRAFRRHL-HIQWRKAEVVRQRTLWLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKANRLLIRHALNHYPHRKRVFWYKNEAEEEQLYADYRMLVQRTGFRPPRIVVEQNIREIGEPLKSTEYT 966
            YL+C +CN +TFVD   +R   +       G         E +P C  CG T  LR G   F   IE  + A+    R    A   LQR  R  L  +++R+  V R+R L  ++ R+A  IQ  +RG   RR    E+ LR+++     ++ +AL   P+   VFWY N AE    Y +YR  V+R+G +P  I VE N+ EI   +   EYT
Sbjct:   62 YLTCQRCNSVTFVDLKRVRRKADQLAAAKVGEGEDTTCLYEQVPKCPGCGSTRYLRAGVVSFQEQIEEERNAIKEFERRRVPATALLQRIARGFLGRMEFRRRLVERERYLRKIK-RAATKIQTRVRGMQARRRTVIERCLRIIRFMAPQILSYALASRPNEPPVFWYSNTAELSVFYWNYREYVRRSGGKPTLIKVENNVLEITRRVLRREYT 274          
BLAST of mRNA_C-linearis_contig76.15238.1 vs. uniprot
Match: H3GJ84_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJ84_PHYRM)

HSP 1 Score: 95.1 bits (235), Expect = 3.740e-17
Identity = 71/208 (34.13%), Postives = 101/208 (48.56%), Query Frame = 1
Query:  343 YLSCTKCNGLTFVDASALRTMLELRGVVDFGNIRPESLPPCVECGETAGLRVGAHDFLSLIEGGKEALARRRRLERMAAKTLQRAFRRHL-HIQWRKAEVVRQRTLWLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKANRLLIRHALNHYPHRKRVFWYKNEAEEEQLYADYRMLVQRTGFRPPRIVVEQNIREIGEPLKSTEY 963
            YL+C +CN +TF+D   +R   +  G  +      E +P C  CG T  LR G   F   IE  + A+    R    A   LQR  R  L  +++R+  V R R L  +  R+A  IQ  +RG   RR    E+ LR++      ++ +AL   P+   VFWY N AE    Y +YR  V+R+G RP  I VE N+ EI   +   E+
Sbjct:   64 YLTCQRCNSVTFIDVLRVRRKADQLGEREDTTFLYEEVPKCPGCGSTRYLRAGVVSFQEQIEEERNAIKEFERRRVPATALLQRIARGFLGRLEFRRRLVARDRYLRKIN-RAATRIQTRVRGMQARRRTVIERCLRIISFMAPQILSYALASRPNEPPVFWYTNTAELSVFYWNYREYVRRSGGRPTLIKVENNVLEITRRVLRREH 270          
BLAST of mRNA_C-linearis_contig76.15238.1 vs. uniprot
Match: A0A8K1CDF9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDF9_PYTOL)

HSP 1 Score: 91.7 bits (226), Expect = 4.760e-16
Identity = 68/217 (31.34%), Postives = 112/217 (51.61%), Query Frame = 1
Query:  325 LFY---KSGYLSCTKCNGLTFVDASALRTMLELRGVVDFGNIRPESLPPCVECGETAGLRVGAHDFLSLIEGGKEALARRRRLERMAAKTLQRAFRRHL-HIQWRKAEVVRQRTLWLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKANRLLIRHALNHYPHRKRVFWYKNEAEEEQLYADYRMLVQRTGFRPPRIVVEQNIREIGEPLKSTEY 963
            LFY   K+ YL+C++CN +TF+D   +R     R          E +P C  CG T  LR G   F   I   ++A+    R    A + +QR  R  +  +++R+ ++  +R +  +  +SA ++Q  +RG   RR    E+ LR+++  +  +++ AL   P    VFWY N +E + L+ +YR  V+R+G +PP + VE NI EI   +   EY
Sbjct:   40 LFYSDFKTPYLTCSRCNSVTFIDVRRVRPKDAPRDPDALSLY--EQVPICAGCGTTKYLRAGVVSFQEKIAEEQQAIKEFERKRGPATELIQRIARGFMGRLEYRRRKLAWERYIRKIN-QSATMVQTRVRGMQARRRTILERCLRIIRTLHPSILKFALTARPDCPPVFWYDNPSELQILFWNYREFVRRSGGKPPLVKVETNILEITRRMLLREY 253          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FQR2_ECTSI1.440e-24869.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2R5D9_9STRA2.840e-5531.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YRG3_AURAN4.910e-4138.63Expressed protein (Fragment) n=1 Tax=Aureococcus a... [more]
A0A8J2X0I4_9STRA5.170e-4032.06Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A836CFY4_9STRA2.880e-3935.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1U287_9STRA3.380e-1835.56Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1U265_9STRA1.030e-1735.56Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A329SZ32_9STRA1.220e-1734.11Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
H3GJ84_PHYRM3.740e-1734.13Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A8K1CDF9_PYTOL4.760e-1631.34Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:853713..857495 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score704.5
Seed ortholog evalue3.7e-200
Seed eggNOG ortholog2880.D7FQR2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Short calmodulin-binding motif containing conserved Ile and Gln residues.
EggNOG OGs2A3HT@1,2RY5B@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_000200.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1587
Cds size1569
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15238.1prot_C-linearis_contig76.15238.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig76 853731..857495 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930457.6392322-UTR-C-linearis_contig76:853712..8537301622930457.6392322-UTR-C-linearis_contig76:853712..853730Chordaria linearis ClinC8C monoicousUTRC-linearis_contig76 853713..853730 +
1690881079.735594-UTR-C-linearis_contig76:853712..8537301690881079.735594-UTR-C-linearis_contig76:853712..853730Chordaria linearis ClinC8C monoicousUTRC-linearis_contig76 853713..853730 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930457.677337-CDS-C-linearis_contig76:853730..8542411622930457.677337-CDS-C-linearis_contig76:853730..854241Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 853731..854241 +
1690881079.7532752-CDS-C-linearis_contig76:853730..8542411690881079.7532752-CDS-C-linearis_contig76:853730..854241Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 853731..854241 +
1622930457.6949196-CDS-C-linearis_contig76:854444..8548801622930457.6949196-CDS-C-linearis_contig76:854444..854880Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 854445..854880 +
1690881079.7660184-CDS-C-linearis_contig76:854444..8548801690881079.7660184-CDS-C-linearis_contig76:854444..854880Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 854445..854880 +
1622930457.713568-CDS-C-linearis_contig76:855066..8551751622930457.713568-CDS-C-linearis_contig76:855066..855175Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 855067..855175 +
1690881079.7787018-CDS-C-linearis_contig76:855066..8551751690881079.7787018-CDS-C-linearis_contig76:855066..855175Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 855067..855175 +
1622930457.725168-CDS-C-linearis_contig76:855245..8553821622930457.725168-CDS-C-linearis_contig76:855245..855382Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 855246..855382 +
1690881079.794201-CDS-C-linearis_contig76:855245..8553821690881079.794201-CDS-C-linearis_contig76:855245..855382Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 855246..855382 +
1622930457.7376983-CDS-C-linearis_contig76:855894..8560211622930457.7376983-CDS-C-linearis_contig76:855894..856021Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 855895..856021 +
1690881079.8080251-CDS-C-linearis_contig76:855894..8560211690881079.8080251-CDS-C-linearis_contig76:855894..856021Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 855895..856021 +
1622930457.7576914-CDS-C-linearis_contig76:856757..8568671622930457.7576914-CDS-C-linearis_contig76:856757..856867Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 856758..856867 +
1690881079.8201547-CDS-C-linearis_contig76:856757..8568671690881079.8201547-CDS-C-linearis_contig76:856757..856867Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 856758..856867 +
1622930457.7747505-CDS-C-linearis_contig76:857356..8574951622930457.7747505-CDS-C-linearis_contig76:857356..857495Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 857357..857495 +
1690881079.83133-CDS-C-linearis_contig76:857356..8574951690881079.83133-CDS-C-linearis_contig76:857356..857495Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 857357..857495 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig76.15238.1

>prot_C-linearis_contig76.15238.1 ID=prot_C-linearis_contig76.15238.1|Name=mRNA_C-linearis_contig76.15238.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=523bp
MQVRVQDDVADALIQRACLTLCHAAASKSRASADRTVRMATGTSSTTTPK
KSAYPSTWSTGSNIQLMAPKMSDTTDRSLFRRALLAKFDTHGYTHQRGLR
RPLFYKSGYLSCTKCNGLTFVDASALRTMLELRGVVDFGNIRPESLPPCV
ECGETAGLRVGAHDFLSLIEGGKEALARRRRLERMAAKTLQRAFRRHLHI
QWRKAEVVRQRTLWLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAN
RLLIRHALNHYPHRKRVFWYKNEAEEEQLYADYRMLVQRTGFRPPRIVVE
QNIREIGEPLKSTEYTHQSTRERGGARVSHTGAMERPKRPPLPDRVPEGA
KKRAARYRSRRAGQNLLTGYLAERSTTNDHNACTEGIARLRQAYITERQE
ELTARLMGHSNPKLAGGLKMKAFHESPYGDDVVSELMNHQVWEVMRRNKR
LEEKDLERKQRAEWVRLRQLEDPQLAMYFREEMKARNVYVINKLRSDRRA
LKNVPSALRDHNRNGGRKYEFPE
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mRNA from alignment at C-linearis_contig76:853713..857495+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig76.15238.1 ID=mRNA_C-linearis_contig76.15238.1|Name=mRNA_C-linearis_contig76.15238.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3783bp|location=Sequence derived from alignment at C-linearis_contig76:853713..857495+ (Chordaria linearis ClinC8C monoicous)
GATCCAGGGCAAGCCGCGATGCAGGTGCGAGTCCAAGACGACGTCGCCGA TGCTTTGATCCAGAGGGCTTGCTTGACCCTTTGCCATGCTGCTGCCTCGA AATCAAGGGCTTCTGCCGACCGCACAGTACGCATGGCCACCGGCACCAGT AGCACCACCACGCCCAAGAAGAGCGCGTACCCGTCAACTTGGTCGACCGG GAGCAACATCCAACTCATGGCTCCGAAAATGAGCGACACGACGGACAGAA GCCTCTTCAGGAGAGCACTCCTGGCAAAGTTCGACACACACGGGTACACA CATCAGAGGGGGCTGCGGCGCCCGCTGTTCTACAAGAGTGGATACCTCAG CTGCACAAAGTGCAACGGTTTGACCTTTGTCGATGCGTCGGCCCTACGCA CCATGCTTGAGCTCCGGGGCGTGGTGGACTTCGGCAACATACGGCCGGAG AGCCTCCCCCCTTGCGTCGAGTGTGGCGAGACGGCGGGCTTGAGGGTCGG AGCCCATGACTTCTTGAGCCTCATCGAAGGTGATGATTTCACATATGGTG CAACACATCGTTCGGGGAAAATTCAAAAGCCGATGGTTATGTTTGTGAAC GACACGTATGTACTACTGTAGACTAACCTGCGATGAGCGGCTTACTGTTG CCCTCCTAAGCTGTGGCGATCGATCTTGAGTGTGCCGACAAAGACCGTCG TCTGCGCGGCTCGCTGTATTCAACTTCAACAGGAGGAAAGGAGGCCCTAG CGCGCCGGCGACGGTTGGAACGGATGGCGGCAAAGACACTCCAGCGGGCT TTCCGACGACACCTACACATTCAGTGGAGAAAAGCCGAAGTCGTGCGACA ACGCACCTTGTGGCTCCTACGGTACCGTTCGGCACAGGTCATCCAAGCGA TGTTGCGGGGGCGTCTGGGTCGCCGTGTGTTTGAAACCGAGAAATGGCTT CGGGTGGTGAAAAAGGCCAACCGTCTGTTGATAAGACACGCGTTGAACCA CTACCCACATCGCAAGAGAGTGTTCTGGTACAAGAACGAAGCGGAAGAGG AGCAGCTGTATGCCGACTACCGGATGCTGGTGCAGAGGACAGGGTTTCGC CCACCCCGGATTGTGGTGGAACAAAACATCCGCGAGATTGGTGAGCCTCT CAAAAGCACGGAATATACGTATGTCCCGTCTACCTCTTCAGTGTCCAAAC AGAAAACGTTGATATACAAAAACAAATCTGGAGTTCGAATGAGGTGCGGG CCAAACTGGTGTAGTAGCGTAACGCATGTTTTTGATGATGTCCGTCTCTA CGTCTCCGTCCGACATGCCCGATGACGAAAAAACGGATGGATAAACAAAC ACAGCCACCAGAGTACTCGAGAGAGAGGCGGAGCTCGTGTCTCGCATACA GGCGCGATGGAGAGGCCTAAGCGTCCGCCGCTACCTGATCGTGTTCCGGA GGGAGCTAAGAAGGTATCGAGAGGTACGCGCTAGCATGGTCTATCGCCTT CAGCGTGCCGTGAGGGGGTGGTCTCACCGGAAGCGGGCCGCCAGATATCG GTCCCGAAGGGCTGGACAAAATTTGCTGACGGGCTACCTTGCCGAGAGGT CAACCACTAACGACCACAACGCCTGCACAGAGGGCATAGCCAGGCTCCGC CAAGCTTACATCACAGAAAGGTATACGAGGGCTACGATTTGTAGTTCCGT TTGTAGGTGTGTTCTCATCGATCACAGCCATGCGCCTTGGTCGGCGCGAG TATCTCAACATGTACTGTAGAGGCGCTAGGGCAGCTTGTTCGGCGGAAAG GAAGGCTGAGGTGCAAGTGAGACGCCCTCGTACATACACAATGTACGAGG TGTTAATCTGCCACACGCAACACGCAATGGGCCATCATTGGCCTCGTTTG CCATCCACGACTCGAAACCCTGCGAAACGCTGCTCGTGCAAACAAGCAAG CAACAGCGCCTTAGATCCTTGTTTCCAACCCCCCCGCACGATCTACACCG GTCTGACAAGGCACGATCACTGTTGTATCTACAGAGTGGATACGCCGGGG CGAGCAGATCTAAAGCCGATTGGATTGGTATCTTAGATGACAAGATTACC CCCCAGACACACAAGCCATACACACACGCATTCAACACTCGCTGGGCGAT GAATCCTTTCGCCGAAAACCTGACACCGACAGACAAGAAGAGCTGACGGC CCGCTTGATGGGGCACTCCAACCCGAAGCTCGCCGGCGGCTTGAAAATGA AGGCGTTCCACGAGAGCCCTTATGGAGACGACGTAGTGTCGGAGCTGATG AACCATCAGGTACTGCGGATGCCTGACGCCTCGGAAATGTGAATTTCGAT GTGGAATTAATTGTGCTTTGGAAACAGAGCACCGCTCATTTTAGGCCTCA ACGCCGACTGACATTTCGTGTACGTCATACAGAGCGTGTGTGTTGGATGC GACACGGGTCGACTAGCGGCGGTCGAAACTGATGATCTACAGTAGGTTTC ATGGTGTTCACGTTATTATTGTGTGTGTGTGTTTTCGTCCCATTTATTTT GGCGACAGTCCCTTTCCGATCAAGGTATGACGTGTACTACACGTTGCGGT GTATTTAGAGTACTACACTTGTTCAGTGTATTTTTCTGTACAACTAGAAC CAACCGGGGTCACGAGGAAGTGGGTAAACACTGGGGCTTTTTTCTTCTTT CTCTGTTTCTTTTTTGCCCCACCTTCCTCCTGCGGTGCTTGCCTTGAATT TTATCGCGAGAAGGGTGCAGCCGTCCCTTTCCCTCGTCAACGTGCTAAGT CGAAGTTTGGTACTCACGAGCTTTTTCAGCTATGTTATCGCTTTCACCTG CAAAGTCGCAAAAGAAACACCTTTGCTTGGAATTGAACTCCAGACTTTGC TGCTAGTGGGTTCGAAGTTAAACCACTAGGCCACCGGGGCGACCGGCTAT TATTGGTGACTGTAAAAGTTCGTGTTCTTTTTAACTTGGGTGTTGTTGTG TTTTGCGCTAGCTCGCCTTTCACGCCGCTTGCGTGCTGCATGCAGGTGTG GGAAGTCATGCGACGAAATAAGCGGCTCGAGGAAAAGGACCTCGAACGGA AACAGAGAGCGGAGTGGGTGCGCCTTAGACAACTGGAAGACCCTCAACTA GCCATGTAATCGGACTTTTCGCTCTCTTGGCGTCGCAGAAACACGCTGCA GCAAGAGAGCTTTGGGAGCTTGTAAAATGTGACGTGTCGCTCCGCAAATA ATGTTCCAAGTTAGTAGGGCTCCAGAACGTGAAAATCTGTGGATTGTGTT CGACGGAGTGTTGCTCGTCACTGCCTAATCCCGTCGTTGGAAACTCGGTG CTTCGTTGGATATCGATGTGGGTTTATTTTGAGGCGGTGTGCGTGTGCGA AGCATTGGTGTAGGATTCGGCGTTGCCTCGTGACTCAGCGCCGAACAAAT AGCCTTGACGACGTGCAACGAACGCCACTCACACAGTACATACATACATA CATACATACATACATACGACGAGCAAGCAGATCACTTTGAAATGCTGTAC TTCCTCATTGTGTTTTGTTGTTCTGTCAGGCTTTTCGTCTGCTAAATCAT GTCTAAATTTTCGCACTAATTGTCGTTGCATCGTTGCATCAAAGGTACTT CCGAGAAGAAATGAAGGCAAGGAACGTGTACGTCATCAACAAGCTGCGTT CGGACCGCCGTGCTCTCAAAAACGTCCCCTCGGCCTTGAGAGACCACAAC CGAAACGGGGGCCGGAAGTACGAATTCCCAGAA
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Coding sequence (CDS) from alignment at C-linearis_contig76:853713..857495+

>mRNA_C-linearis_contig76.15238.1 ID=mRNA_C-linearis_contig76.15238.1|Name=mRNA_C-linearis_contig76.15238.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3138bp|location=Sequence derived from alignment at C-linearis_contig76:853713..857495+ (Chordaria linearis ClinC8C monoicous)
ATGCAGGTGCGAGTCCAAGACGACGTCGCCGATGCTTTGATCCAGAGGGC
TTGCTTGACCCTTTGCCATGCTGCTGCCTCGAAATCAAGGGCTTCTGCCG
ACCGCACAGTACGCATGGCCACCGGCACCAGTAGCACCACCACGCCCAAG
AAGAGCGCGTACCCGTCAACTTGGTCGACCGGGAGCAACATCCAACTCAT
GGCTCCGAAAATGAGCGACACGACGGACAGAAGCCTCTTCAGGAGAGCAC
TCCTGGCAAAGTTCGACACACACGGGTACACACATCAGAGGGGGCTGCGG
CGCCCGCTGTTCTACAAGAGTGGATACCTCAGCTGCACAAAGTGCAACGG
TTTGACCTTTGTCGATGCGTCGGCCCTACGCACCATGCTTGAGCTCCGGG
GCGTGGTGGACTTCGGCAACATACGGCCGGAGAGCCTCCCCCCTTGCGTC
GAGTGTGGCGAGACGGCGGGCTTGAGGGTCGGAGCCCATGACTTCTTGAG
CCTCATCGAAGATGCAGGTGCGAGTCCAAGACGACGTCGCCGATGCTTTG
ATCCAGAGGGCTTGCTTGACCCTTTGCCATGCTGCTGCCTCGAAATCAAG
GGCTTCTGCCGACCGCACAGTACGCATGGCCACCGGCACCAGTAGCACCA
CCACGCCCAAGAAGAGCGCGTACCCGTCAACTTGGTCGACCGGGAGCAAC
ATCCAACTCATGGCTCCGAAAATGAGCGACACGACGGACAGAAGCCTCTT
CAGGAGAGCACTCCTGGCAAAGTTCGACACACACGGGTACACACATCAGA
GGGGGCTGCGGCGCCCGCTGTTCTACAAGAGTGGATACCTCAGCTGCACA
AAGTGCAACGGTTTGACCTTTGTCGATGCGTCGGCCCTACGCACCATGCT
TGAGCTCCGGGGCGTGGTGGACTTCGGCAACATACGGCCGGAGAGCCTCC
CCCCTTGCGTCGAGTGTGGCGAGACGGCGGGCTTGAGGGTCGGAGCCCAT
GACTTCTTGAGCCTCATCGAAGGAGGAAAGGAGGCCCTAGCGCGCCGGCG
ACGGTTGGAACGGATGGCGGCAAAGACACTCCAGCGGGCTTTCCGACGAC
ACCTACACATTCAGTGGAGAAAAGCCGAAGTCGTGCGACAACGCACCTTG
TGGCTCCTACGGTACCGTTCGGCACAGGTCATCCAAGCGATGTTGCGGGG
GCGTCTGGGTCGCCGTGTGTTTGAAACCGAGAAATGGCTTCGGGTGGTGA
AAAAGGCCAACCGTCTGTTGATAAGACACGCGTTGAACCACTACCCACAT
CGCAAGAGAGTGTTCTGGTACAAGAACGAAGCGGAAGAGGAGCAGCTGTA
TGCCGACTACCGGATGCTGGTGCAGAGGACAGGGTTTCGCCCACCCCGGA
TTGTGGTGGAACAAAACATCCGCGAGATTGGTGAGCCTCTCAAAAGCACG
GAATATACGAGGAAAGGAGGCCCTAGCGCGCCGGCGACGGTTGGAACGGA
TGGCGGCAAAGACACTCCAGCGGGCTTTCCGACGACACCTACACATTCAG
TGGAGAAAAGCCGAAGTCGTGCGACAACGCACCTTGTGGCTCCTACGGTA
CCGTTCGGCACAGGTCATCCAAGCGATGTTGCGGGGGCGTCTGGGTCGCC
GTGTGTTTGAAACCGAGAAATGGCTTCGGGTGGTGAAAAAGGCCAACCGT
CTGTTGATAAGACACGCGTTGAACCACTACCCACATCGCAAGAGAGTGTT
CTGGTACAAGAACGAAGCGGAAGAGGAGCAGCTGTATGCCGACTACCGGA
TGCTGGTGCAGAGGACAGGGTTTCGCCCACCCCGGATTGTGGTGGAACAA
AACATCCGCGAGATTGGTGAGCCTCTCAAAAGCACGGAATATACCCACCA
GAGTACTCGAGAGAGAGGCGGAGCTCGTGTCTCGCATACAGGCGCGATGG
AGAGGCCTAAGCGTCCGCCGCTACCTGATCGTGTTCCGGAGGGAGCTAAG
AAGCCACCAGAGTACTCGAGAGAGAGGCGGAGCTCGTGTCTCGCATACAG
GCGCGATGGAGAGGCCTAAGCGTCCGCCGCTACCTGATCGTGTTCCGGAG
GGAGCTAAGAAGCGGGCCGCCAGATATCGGTCCCGAAGGGCTGGACAAAA
TTTGCTGACGGGCTACCTTGCCGAGAGGTCAACCACTAACGACCACAACG
CCTGCACAGAGGGCATAGCCAGGCTCCGCCAAGCTTACATCACAGAAAGC
GGGCCGCCAGATATCGGTCCCGAAGGGCTGGACAAAATTTGCTGACGGGC
TACCTTGCCGAGAGGTCAACCACTAACGACCACAACGCCTGCACAGAGGG
CATAGCCAGGCTCCGCCAAGCTTACATCACAGAAAGACAAGAAGAGCTGA
CGGCCCGCTTGATGGGGCACTCCAACCCGAAGCTCGCCGGCGGCTTGAAA
ATGAAGGCGTTCCACGAGAGCCCTTATGGAGACGACGTAGTGTCGGAGCT
GATGAACCATCAGACAAGAAGAGCTGACGGCCCGCTTGATGGGGCACTCC
AACCCGAAGCTCGCCGGCGGCTTGAAAATGAAGGCGTTCCACGAGAGCCC
TTATGGAGACGACGTAGTGTCGGAGCTGATGAACCATCAGGTGTGGGAAG
TCATGCGACGAAATAAGCGGCTCGAGGAAAAGGACCTCGAACGGAAACAG
AGAGCGGAGTGGGTGCGCCTTAGACAACTGGAAGACCCTCAACTAGCCAT
GTGTGGGAAGTCATGCGACGAAATAAGCGGCTCGAGGAAAAGGACCTCGA
ACGGAAACAGAGAGCGGAGTGGGTGCGCCTTAGACAACTGGAAGACCCTC
AACTAGCCATGTACTTCCGAGAAGAAATGAAGGCAAGGAACGTGTACGTC
ATCAACAAGCTGCGTTCGGACCGCCGTGCTCTCAAAAACGTCCCCTCGGC
CTTGAGAGACCACAACCGAAACGGGGGCCGGAAGTACGAATTCCCAGAAG
TACTTCCGAGAAGAAATGAAGGCAAGGAACGTGTACGTCATCAACAAGCT
GCGTTCGGACCGCCGTGCTCTCAAAAACGTCCCCTCGGCCTTGAGAGACC
ACAACCGAAACGGGGGCCGGAAGTACGAATTCCCAGAA
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