mRNA_C-linearis_contig76.15236.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig76.15236.1 vs. uniprot
Match: D7FQR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR4_ECTSI) HSP 1 Score: 410 bits (1053), Expect = 2.110e-141 Identity = 221/310 (71.29%), Postives = 253/310 (81.61%), Query Frame = 1
Query: 1 QMNGGRFLLLVTGASRGFGRCVAEEFVRQVAPSSPVDLVLVARSESGLRSATDAIDDMARSIRTQDGVADVDVVVRREALDLGDLDKLEAGLEGVFSRIDPLRYSRAMLVNNAGSLGHISFANELPSLATLRSEMDFNITSAFWLSSRFAAVFGARK------SDEKGDVSSSSEPAGASKADSSVAASSTGGGAVHDVSNNVLVNVSSLAALQPFESWGGYSSGKAARDMFHRVLAAEQASIGGLKVLNYAPGPMNTDMSRDIRSPEQYEEDLKNGNLIEPTKSAEKCVRLAVRGAFVTGSHVDVFDEE 912
QMNGGRFLLLVTGASRGFGRCVAEEFVRQVAP++PVDLVLVARSE+GL SATD+++++A SI GV VVR+E LDLGDLD LEA LEGVFSRIDP RYSRA+LVNNAGSLGHI A+ LPSLA RSEMDFNITSA WLSSRF+AVFGA++ + +G + S + A ++ AS+ VHDVSNN++VN+SSLAALQPFE+WGGYSSGKAARDMFHRVLA EQASIGGLKVLNYAPGPMNTDMSRDIRS EQ+EEDL++G LI+ SAEKCVRLA+ G F +GSHVD FDE+
Sbjct: 5 QMNGGRFLLLVTGASRGFGRCVAEEFVRQVAPANPVDLVLVARSETGLESATDSVNEIAASINAPGGV-----VVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLVNNAGSLGHIGVASALPSLAAFRSEMDFNITSALWLSSRFSAVFGAKRPNLSSGNSVEGTLGESGADVDKNGATTAATASAD---TVHDVSNNIVVNISSLAALQPFETWGGYSSGKAARDMFHRVLATEQASIGGLKVLNYAPGPMNTDMSRDIRSAEQFEEDLQSGKLIDARVSAEKCVRLALHGTFASGSHVDFFDED 306
BLAST of mRNA_C-linearis_contig76.15236.1 vs. uniprot
Match: A0A7S1CY78_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY78_CYCTE) HSP 1 Score: 174 bits (441), Expect = 4.890e-49 Identity = 103/304 (33.88%), Postives = 165/304 (54.28%), Query Frame = 1
Query: 22 LLLVTGASRGFGRCVAEEFVRQVAPSSPVDLVLVARSESGLRSATDAIDDMARSIRTQDGVADVDVVVRREALDLGDLDKLEAGLEGVFSRIDPL-RYSRAMLVNNAGSLGHISFANELPSLATLRSEMDFNITSAFWLSSRFAAVFGARKSDEKGDVSSSSEPAGASKADSSVAASSTGGGAVHDVSNNVLVNVSSLAALQPFESWGGYSSGKAARDMFHRVLAAEQASIGGLKVLNYAPGPMNTDMSRDIRSPEQYEEDL--------KNGNLIEPTKSAEKCVRLAVRGAFVTGSHVDVFD 906
LL+VTGASRG GR +A F + SS V+ VL+ARS+ GL AI+ + V+ V +DL +LD L++ ++ + + P +Y + ++VNNAGSLGH+ N + SL ++ +FN+ S+FW S+RF+ A K++ K D+S+ V++++SSL A+QPF + Y +GKAA DM+H LA E ++ +LNYAPGP++T+M+ +RS + + DL + G ++ K++ + V+L + G F +G+HVD FD
Sbjct: 27 LLIVTGASRGLGRAIALSFCSSIPSSSTVEAVLIARSKDGLDETKAAIEKLG-----------VNAQVTNHVMDLSNLDLLDSNVDTIIGGVKPFAQYEKILVVNNAGSLGHVGPINAMESLEVMKEFTNFNVASSFWFSTRFSKEIVAAKAETKEDLSA------------------------------VIIHISSLCAVQPFATMASYCAGKAANDMYHTTLAKENPTV---PILNYAPGPLDTEMTTTLRSSDSLDRDLHSFFQSSHEKGEMVPLEKTSARLVKLVLSGEFESGAHVDYFD 286
BLAST of mRNA_C-linearis_contig76.15236.1 vs. uniprot
Match: A0A836CM32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM32_9STRA) HSP 1 Score: 172 bits (436), Expect = 5.700e-48 Identity = 123/336 (36.61%), Postives = 172/336 (51.19%), Query Frame = 1
Query: 4 MNGGRFLLLVTGASRGFGRCVAEEFVRQVAPSSPVDLVLVARSESGLRSATDAIDDMARSIRTQDGVADVDVVVRREALDLGDLDKLEAGLEGVFSRIDPLRYSRAMLVNNAGSLGHISFANELPSLATLRSEMDFNITSAFWLSSRFAAVFGARKSDEKGDVSSSSEPAGASKADSSVAASSTGGGAVHDVSN---------------------------NVLVNVSSLAALQPFESWGGYSSGKAARDMFHRVLAAEQASIGGLKVLNYAPGPMNTDMSRDIRSPEQYEEDLK--------NGNLIEPTKSAEKCVRLAVRGAFVTGSHVDVFD 906
M+G +L++VTGASRG GRC+A+E VR + + L+L+ARSESGL + A SIR G+ DV + + +DLG+L LE L+ FS +D Y R +L NNAGSLG ++ A +L S A LR +D NITSA W++ F + R +V+VN+SSLAA++PF +W Y +GKAARDMFH LAAE + L+VL+YAPGP++TDM IR+ + +L+ +G L+ P++SA +CVRL G + G+HVD FD
Sbjct: 1 MSGLPWLVIVTGASRGLGRCLAQEAVRSIGKDHRMTLLLMARSESGLM-------ETAASIR---GMNSEDVTIEVQPVDLGNLSTLETSLQNAFSGLDARHYQRCVLFNNAGSLGELAPAMDL-SFAGLREAVDLNITSAMWVTCAFVNLILPRWQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMPDVVVNISSLAAVKPFPTWAAYCAGKAARDMFHAALAAEHRA-SQLRVLSYAPGPLDTDMQARIRAADGCAPELRAFFATMQRDGALVRPSESAARCVRLVREGCWECGAHVDFFD 324
BLAST of mRNA_C-linearis_contig76.15236.1 vs. uniprot
Match: A0A7S1U7H4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7H4_9STRA) HSP 1 Score: 169 bits (428), Expect = 8.130e-47 Identity = 115/306 (37.58%), Postives = 173/306 (56.54%), Query Frame = 1
Query: 25 LLVTGASRGFGRCVAEEFVRQVAPSSPVDLVLVARSESGLRSATDAIDDMARSIRTQDGVA---DVDVVVRREALDLGDLDKLEAGLEGVFSRIDPLRYSRAMLVNNAGSLGHISFANELPSLATLRSEMDFNITSAFWLSSRFAAVFGARKSDEKGDVSSSSEPAGASKADSSVAASSTGGGAVHDVSNNVLVNVSSLAALQPFESWGGYSSGKAARDMFHRVLAAEQASIGGLKVLNYAPGPMNTDMSRDIRSPEQYEEDLK--------NGNLIEPTKSAEKCVRLAVRGAFVTGSHVDVFDE 909
+++TGASRGFGR VA R+ + L+LVARS L+ T A+ + R +G+ D + V A+DL +L++ EA + ++ L R +LVNNAG++G + E+ S+ +++EMD N+TSA ++++ FA FGA ++D + + AGA AA G ++NVSSLAA +PF+SWG Y +GKAAR++FH LA EQA VLNYAPGPM+T M +IR+ E + L+ +GNL+ P SA K ++L F++GSH+D +D+
Sbjct: 7 VVITGASRGFGRAVAVAMAREWV--CQLTLMLVARSSESLQE-TAAM--LLRERSKTEGIEMPMDQSMAVSVAAVDLRNLEETEAWAKQAVDKLKGLAPDRIILVNNAGTIGGLGCIQEIESIKEMQTEMDLNVTSAMYITAAFARKFGAPRADRL--HAEENGHAGA-------AAGGMGMPPAPPRPQTFIINVSSLAAREPFQSWGMYCAGKAAREIFHAALAKEQAHCDSFYVLNYAPGPMDTAMQAEIRNSEATFQPLREASTQAFEDGNLVRPEDSANKLLQLIEDAEFISGSHLDFYDD 298
BLAST of mRNA_C-linearis_contig76.15236.1 vs. uniprot
Match: A0A6A3RA53_9STRA (Sepiapterin reductase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RA53_9STRA) HSP 1 Score: 166 bits (421), Expect = 3.090e-46 Identity = 114/306 (37.25%), Postives = 173/306 (56.54%), Query Frame = 1
Query: 16 RFLLLVTGASRGFGRCVAEEFVRQVAPSSPVDLVLVARSESGLRSATDAIDDMARSIRTQDGVADVDVVVRREALDLGDLDKLEAGLEGVFSRIDPLRYSRAMLVNNAGSLGHISFANELPSLAT-LRSEMDFNITSAFWLSSRFAAVFGARKSDEKGDVSSSSEPAGASKADSSVAASSTGGGAVHDVSNNVLVNVSSLAALQPFESWGGYSSGKAARDMFHRVLAAEQASIGGLKVLNYAPGPMNTDMSRDIRS-----PE---QYEEDLKNGNLIEPTKSAEKCVRLAVRGAFVTGSHVDVFD 906
R +LVTGASRGFGRC+A +F R + + ++L L ARSES L+ + R +R++ G A ++ + +DL + A ++ V ++ Y+R LV+NAGSLG + +E S T L + N+TS WL+ RF VFGA + D +AA+S + + V+VN++SL ++PF++ Y SGKAAR+M HRV+A EQ + G ++VL Y+PGPM+TDM + IR PE Q+E+ G LI P +S+++ V+LA+ G + TG+HVD +D
Sbjct: 2 RSAVLVTGASRGFGRCLALDFARLL-KTQDLELHLWARSESDLK-------ETERLVRSEWGTA-AELRCFVQCVDLSNPADYAAKVDQVLLQLAAQSYARVFLVHNAGSLGQLGLVHECASNPTELAQYWELNVTSVLWLNKRFLDVFGASR-------------------DELLAATSA-----EEKTQLVIVNITSLCGIEPFKTHMMYCSGKAAREMHHRVIATEQEAAGKVRVLQYSPGPMDTDMQKTIRESPRVDPELRKQFEDMKAQGTLIPPAQSSQRGVKLAISGDYETGAHVDYYD 274
BLAST of mRNA_C-linearis_contig76.15236.1 vs. uniprot
Match: B7FX65_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX65_PHATC) HSP 1 Score: 166 bits (419), Expect = 5.500e-46 Identity = 112/310 (36.13%), Postives = 164/310 (52.90%), Query Frame = 1
Query: 22 LLLVTGASRGFGRCVAEEF----VRQVAPSSP-VDLVLVARSESGLRSATDAIDDMARSIRTQDGVADVDVVVRREALDLGDLDKLEAGLEGVFSRI--DPLRYSRAMLVNNAGSLGHISFANELPSLATLRSEMDFNITSAFWLSSRFAAVFGARKSDEKGDVSSSSEPAGASKADSSVAASSTGGGAVHDVSNNVLVNVSSLAALQPFESWGGYSSGKAARDMFHRVLAAEQASIGGLKVLNYAPGPMNTDMSRDIRSPEQYEEDLK---NGNLIEPTKSAEKCVRLAVRGAFVTGSHVDVFDEEKEN 921
LL++TGASRG GR +A EF + PS + VL+ARS SGL AI+ R +D+++ V ++DL DL+ L+ L+ VF +I D ++Y R +LVNNAGSLG + E PSL+ +R +DFN+TSA W + RF + DE+ +D + + VN+SSL A+QPF + YS+ KAARD + A E +K LNYAPGP+ TDM+ ++R + +++LK LI+P SA+ RL +F +G H+D FD + E+
Sbjct: 7 LLVITGASRGLGRAIANEFCGPSLSGYWPSLRYIRAVLIARSTSGLEETRTAIEANTRK-------SDLNIRVDLHSIDLSDLNTLDHKLDAVFQQIQNDQIKYDRVVLVNNAGSLGALGPCLESPSLSDMRQTVDFNVTSALWTTVRFGRFI---RDDER----------------------------TNDATTTI-VNISSLVAVQPFPTMAIYSAVKAARDSYQEAFAQELNGDTNVKFLNYAPGPLETDMANELRKDARLDDNLKPHFQKTLIDPNASAKTLARLVAENSFESGKHIDYFDLQSES 277
BLAST of mRNA_C-linearis_contig76.15236.1 vs. uniprot
Match: A0A0P1AK78_PLAHL (Sepiapterin reductase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK78_PLAHL) HSP 1 Score: 164 bits (416), Expect = 2.180e-45 Identity = 107/305 (35.08%), Postives = 174/305 (57.05%), Query Frame = 1
Query: 25 LLVTGASRGFGRCVAEEFVRQVAPSSPVDLVLVARSESGLRSATDAIDDMARSIRTQDGVADVDVVVRREALDLGDLDKLEAGLEGVFSRIDPLRYSRAMLVNNAGSLGHISFANELPSLAT-LRSEMDFNITSAFWLSSRFAAVFGARKSDEKGDVSSSSEPAGASKADSSVAASSTGGGAVHDVSNNVLVNVSSLAALQPFESWGGYSSGKAARDMFHRVLAAEQASIGGLKVLNYAPGPMNTDMSRDIRSPEQYEEDLK--------NGNLIEPTKSAEKCVRLAVRGAFVTGSHVDVFDEE 912
+L+TGASRGFGR +A +FV Q+ S VDL L AR ESGL+ + +A + ++G ++ ++ +++DL + + + +E + +++ RY R LV+NAGSLG + A E+ S AT L + N+TS WL++ F FGA + + +S + V+ V+VN++SL +++PF++ Y +GKAAR+M HRV+A EQA+ ++VL Y+PGPM+T+M R IR + +L+ NG L+ +S+ +CV+LA+ G F +G+HVD D +
Sbjct: 5 ILITGASRGFGRYLALDFVSQLKAQS-VDLHLWARDESGLKET----ERLALEMWEKEG-SEGKLLCFSQSVDLSNSGEYTSKVEDLMRQLEKQRYDRVFLVHNAGSLGKLGLAQEVMSSATELTPYWELNVTSVMWLNNCFLRAFGASREELSSPTFASDK-----------------------VTQLVIVNITSLCSIKPFKTHMLYCTGKAAREMHHRVIATEQAAGNKVQVLQYSPGPMDTEMQRTIRESPNVDTELQTKFREMKANGELVPTAQSSLRCVKLAINGNFESGAHVDYCDHK 280
BLAST of mRNA_C-linearis_contig76.15236.1 vs. uniprot
Match: UPI001D29C977 (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=UPI001D29C977) HSP 1 Score: 163 bits (412), Expect = 1.480e-44 Identity = 113/322 (35.09%), Postives = 174/322 (54.04%), Query Frame = 1
Query: 16 RFLLLVTGASRGFGRCVAEEFVRQVAPSSPVDLVLVARSESGLRSATDAIDDMARSIRTQDGVADVDVVVRRE------ALDLGDLDKLEAGLEGVFSRIDPLRYSRAMLVNNAGSLGHISFANELPSLAT-LRSEMDFNITSAFWLSSRFAAVFGARKSDEKGDVSSSSEPAGASKADSSVAASSTGGGAVHDVSNNVLVNVSSLAALQPFESWGGYSSGKAARDMFHRVLAAEQASIGGLKVLNYAPGPMNTDMSRDIRSPEQYEEDLKN--------GNLIEPTKSAEKCVRLAVRGAFVTGSHVDVFD-----EEKEN 921
R +LVTGASRGFGRC+ +FVRQ+ VDL L ARSE L+ T+ + ++ + RRE ++DL + ++ V ++ Y + LV+NAGSLG + E S T L ++ N+TS WL+ RF VFGA + + +S+++ A +KA ++ V+VN++SL ++PF++ Y +GKAAR+M HRV+A EQA +G ++VL+Y+PGPM+TDM + IR DL+ G LI P S+ + V+LA+ G + G+HVD +D E+++N
Sbjct: 3 RSAVLVTGASRGFGRCLTLDFVRQL-KDQDVDLHLWARSEGELKE-TERLARAEWEVQASTDSTASNTTSRRELRCFLQSVDLSNPVDYSLKVDQVLLQLTAQSYDQVFLVHNAGSLGQLGLVQECASSPTELAQYLELNVTSVLWLNKRFLDVFGASREE----ISAAAAAAAPAKA---------------QITELVIVNITSLCGIEPFKTHMMYCTGKAAREMNHRVIATEQALVGKVRVLSYSPGPMDTDMQKTIRDSPLVSPDLRKQFADMKAQGTLIPPAVSSLRGVKLALSGEYENGAHVDYYDLDPPTEQRDN 303
BLAST of mRNA_C-linearis_contig76.15236.1 vs. uniprot
Match: W2Q6D1_PHYPN (Sepiapterin reductase n=12 Tax=Phytophthora TaxID=4783 RepID=W2Q6D1_PHYPN) HSP 1 Score: 160 bits (406), Expect = 6.000e-44 Identity = 107/303 (35.31%), Postives = 167/303 (55.12%), Query Frame = 1
Query: 25 LLVTGASRGFGRCVAEEFVRQVAPSSPVDLVLVARSESGLRSATDAIDDMARSIRTQDGVADVDVVVRREALDLGDLDKLEAGLEGVFSRIDPLRYSRAMLVNNAGSLGHISFANELPSLAT-LRSEMDFNITSAFWLSSRFAAVFGARKSDEKGDVSSSSEPAGASKADSSVAASSTGGGAVHDVSNNVLVNVSSLAALQPFESWGGYSSGKAARDMFHRVLAAEQASIGGLKVLNYAPGPMNTDMSRDIRSPEQYEEDLKN--------GNLIEPTKSAEKCVRLAVRGAFVTGSHVDVFD 906
+L+TGASRGFGRC+ +F R + S +DL L ARSE+ L+ + +AR + A ++ + +DLG+ ++ V ++ Y R LV+NAGSLG + E S L + N+TS WL+ +F +FGA + + +SS+E H + V+VNV+SL ++PF++ Y +GKAAR+M HRV+A EQA++G ++VL Y+PGPM+TDM + +R Q + +L+ G LI P +S+E+ V+LA+ G + TG+HVD +D
Sbjct: 5 VLITGASRGFGRCLTLDFARLLKAQS-IDLHLWARSEADLKET----ERLARG-EWEKQAATGELKCFLQPVDLGNSVDYMTKVDQVLLQLAEQSYDRVYLVHNAGSLGQLGLVQECASSPIELAQYWELNVTSVLWLNKQFLDMFGASRDELLAPAASSNEK--------------------H--TQLVIVNVTSLCGIEPFKTHMLYCTGKAAREMHHRVIATEQAAVGKVRVLQYSPGPMDTDMQKTLRETPQLDPELRKQFADMKAQGTLIPPAQSSERGVKLAISGDYETGAHVDFYD 279
BLAST of mRNA_C-linearis_contig76.15236.1 vs. uniprot
Match: A0A2P4XZ23_9STRA (Sepiapterin reductase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XZ23_9STRA) HSP 1 Score: 160 bits (405), Expect = 8.220e-44 Identity = 112/308 (36.36%), Postives = 168/308 (54.55%), Query Frame = 1
Query: 25 LLVTGASRGFGRCVAEEFVRQVAPSSPVDLVLVARSESGLRSATDAIDDMARSIRTQDGVADVDVVVRREALDLGDLDKLEAGLEGVFSRIDPLRYSRAMLVNNAGSLGHISFANELPSLAT-LRSEMDFNITSAFWLSSRFAAVFGARKSDEKGDVSSSSEPAGASKADSSVAASSTGGGAVHDVSNNVLVNVSSLAALQPFESWGGYSSGKAARDMFHRVLAAEQASIGGLKVLNYAPGPMNTDMSRDIR-SP-------EQYEEDLKNGNLIEPTKSAEKCVRLAVRGAFVTGSHVDVFDEEKEN 921
+L+TGASRGFGRC+A +FVRQ+ S +DL L AR+E+ L+ T+ + R + ++ + +++DL ++ V ++ Y R LV+NAGSLG + E S T L + N+TS WL+ RF VFGA + DE S++ E + V+VN++SL ++PF++ Y SGKAAR+M HRV+A EQ+ G +VL Y+PGPM+TDM IR SP +Q+ + G LI P +S+E+ V+LA+ G + TG+HVD +D + N
Sbjct: 5 VLITGASRGFGRCLALDFVRQLKTQS-LDLHLWARNEADLKE-TERL--AVREWEKEAATGELQCFL--QSVDLSSSVDYMTKVDQVLLQLAEQSYDRVFLVHNAGSLGQLGLVQECASSPTELTQYWELNVTSVLWLNKRFLDVFGASR-DELLTTSATDEKQ----------------------TQLVIVNITSLCGIEPFKTHMMYCSGKAAREMHHRVIATEQSVAGKTRVLQYSPGPMDTDMQTTIRESPLVDPQLRKQFADMKAQGTLIPPAQSSERGVKLAISGEYETGTHVDYYDLDSPN 283 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig76.15236.1 >prot_C-linearis_contig76.15236.1 ID=prot_C-linearis_contig76.15236.1|Name=mRNA_C-linearis_contig76.15236.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=307bp MNGGRFLLLVTGASRGFGRCVAEEFVRQVAPSSPVDLVLVARSESGLRSAback to top mRNA from alignment at C-linearis_contig76:846296..848236+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig76.15236.1 ID=mRNA_C-linearis_contig76.15236.1|Name=mRNA_C-linearis_contig76.15236.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1941bp|location=Sequence derived from alignment at C-linearis_contig76:846296..848236+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig76:846296..848236+ >mRNA_C-linearis_contig76.15236.1 ID=mRNA_C-linearis_contig76.15236.1|Name=mRNA_C-linearis_contig76.15236.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1842bp|location=Sequence derived from alignment at C-linearis_contig76:846296..848236+ (Chordaria linearis ClinC8C monoicous)back to top |