mRNA_C-linearis_contig76.15228.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig76.15228.1 vs. uniprot
Match: D7FQS1_ECTSI (Phosphatidate cytidylyltransferase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQS1_ECTSI) HSP 1 Score: 522 bits (1344), Expect = 3.190e-180 Identity = 270/339 (79.65%), Postives = 299/339 (88.20%), Query Frame = 3
Query: 24 RLTQFLSDEELTELVSAFPAVEFAFAYGSGVVQQKGYAEYVSRPSELPMLDLVLVVKDSKEWHQANLERNGAHYSGLARLAGAGGVARLQQDFGAKLYYNALVPISTTSHRGRPMKYGVVSMKHFAEDLTDWTWLYTAGRLHKPVRIIQGNAQVSGMIQGNLLSAAKASLLLLPERFSAQEFYITVAGLSYTGDFRMYFGENPDKVKNIVSATVGRFQDLYAPTLKGIPGLVATGHDSSSYAQDVSPTTRMALATALPRAVRALLPLDKSGAAGSGLVNGGAPLTAEVSRAFAAVVSKSSLRQGVKGLVTAGVLKSAAYSFAKVTQAIAGRKNRRQDTP 1040
RLTQFLSD+EL EL+SAFP EFAFAYGSGVV+Q+GYAE VS S+LPMLDLVL V+DS+ WH+ANL+RN HYSGLARL GAGGVA LQ+ FGAKLYYNALVP+STTSHRGR MKYGV+S KH AEDLTDWTWLYTAGRL KPVRIIQGN + S +I+GNL SAAKASLLLLPERFSAQEFY TVAGLSYTGDFRMYFGENPDKVKNIVSAT+GRFQDLYAP LKGIPG+ ATG D SSY QDVSPTTR+ALA +LP AVR LLPL + G+AG+ L GGAPLTAEVSRA A VVS+SSLRQG KGL+TAGVLKSA+YS AKVTQAIAGR+ +RQ++P
Sbjct: 3 RLTQFLSDDELGELISAFPEAEFAFAYGSGVVKQQGYAENVSNASDLPMLDLVLAVEDSEAWHKANLKRNRDHYSGLARLFGAGGVAWLQEGFGAKLYYNALVPLSTTSHRGRSMKYGVISTKHLAEDLTDWTWLYTAGRLQKPVRIIQGNHKASAIIEGNLSSAAKASLLLLPERFSAQEFYTTVAGLSYTGDFRMYFGENPDKVKNIVSATLGRFQDLYAPALKGIPGMTATGSDCSSYDQDVSPTTRLALARSLPGAVRGLLPLGEGGSAGNKLATGGAPLTAEVSRALATVVSRSSLRQGAKGLLTAGVLKSASYSLAKVTQAIAGRR-KRQESP 340
BLAST of mRNA_C-linearis_contig76.15228.1 vs. uniprot
Match: A0A835YMA3_9STRA (Phosphatidate cytidylyltransferase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA3_9STRA) HSP 1 Score: 250 bits (638), Expect = 9.280e-74 Identity = 152/372 (40.86%), Postives = 208/372 (55.91%), Query Frame = 3
Query: 24 RLTQFLSDEELTELVSAFPAVEFAFAYGSGVVQQKGYAEYVSRPSELPMLDLVLVVKDSKEWHQANLERNGAHYSGLARLAGAGGVARLQQDFGAKLYYNALVPISTTSHRGRPMKYG----------------------VVSMKHFAEDLTDWTWLYTAGRLHKPVRIIQ---------GNAQVSGMIQGNLLSAAKASLLLLPERFSAQEFYITVAGL------------SYTGDFRMYFGENPDKVKNIVSATVGRFQDLYAPTLKGIPGLVATGHDSSSYAQDVSPTTRMALATALPRAV-----RALLPLDKSGAAGSGLVNGGAPLTAEVSRAFAAVVSKSSLRQGVKGLVTAGVLKSAAYSFAKV 995
+ + LS ++ ++++ P VE+AFAYGSG ++Q+GY E +RPS +PMLDLV+ V D++ WH ANL+ N HYS + R GA G ARLQ+++GA++ Y +VPI H GR MKYG V+S DLT W WLY AGR+HKPV+ ++ + ++GNL SA A+LLLLPERFSAQE ++ +AGL SY GD RM ENP KV NIVS + F+ LY L+ +P + + HD S++AQD SP R +L LP AV RA+L AA S N +++ A +V SS QG+KG+V+AG+ KS Y+ AKV
Sbjct: 10 KASSVLSTTDMQDILATLPPVEYAFAYGSGALKQEGY-EQTARPSAMPMLDLVVCVDDARAWHAANLDSNPHHYSSICRAMGAPGTARLQENYGARMLYTTMVPIPIGPHTGRLMKYGMXXXXXXXXXXXXXXXXXXXXXVISTGDLVTDLTQWRWLYAAGRMHKPVQTLRPPQCSAXXXXXXXXARAVEGNLASAVVAALLLLPERFSAQELFLKIAGLXXXXXXXXXXXXSYAGDIRMGIAENPHKVSNIVSGSFDAFKTLYRDALQAMPQVTSRAHDLSTFAQDASPAARASLVERLPSAVLQGRHRAIL----LAAARSASPN------QALAKRLAQIVGASSRWQGLKGVVSAGMRKSFLYALAKV 370
BLAST of mRNA_C-linearis_contig76.15228.1 vs. uniprot
Match: W7TRJ7_9STRA (Phosphatidate cytidylyltransferase, mitochondrial n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRJ7_9STRA) HSP 1 Score: 228 bits (581), Expect = 3.130e-65 Identity = 141/357 (39.50%), Postives = 195/357 (54.62%), Query Frame = 3
Query: 63 LVSAFPAVEFAFAYGSGVVQQKGYAEYV-----------------SRPS------ELPMLDLVLVVKDSKEWHQANLERNGAHYSGLARLAGAGGVARLQQDFGAKLYYNALVPISTTSHRGRPMKYGVVSMKHFAEDLTDWTWLYTAGRLHKPVRIIQGNAQVSGMIQGNLLSAAKASLLLLPERFSAQEFYITVAGLSYTGDFRMYFGENPDKVKNIVSATVGRFQDLYAPTLKGIPGLVATGHDSSSYAQDVSPTTRMALATALPRAVRALLPLDK-----SGAAGSGLVNG----------------GAPLTAEVSRAFAAVVSKSSLRQGVKGLVTAGVLKSAAYSFAKVTQ 1001
++ PA++FAFAYGSGV Q GY+++ S PS PMLDLV+ V++ EWH+ NLERN YS + R GA + ++Q+D+GA LYYN +P+ H R MKYG++S DL DW W+Y AGR+ KPV+I++ ++ + NL SA +A+LLLLPE FS + + +AGLSY GDFRM FGENP KVKNIV++ + F +LY+P L L A D ++QD+SP R + LP A+R L K S + +V+ G + V A VV++SSL QG KG+ TAGV K+ YS K+ +
Sbjct: 22 ILQKLPAIDFAFAYGSGVFGQDGYSDHEQKEAIRGVNDQLLQPGGSTPSANMQLKRPPMLDLVVAVRNPIEWHRENLERNWKDYS-ILRYLGAERLGQIQEDYGAALYYNTALPVP--GHPNRVMKYGIISTHALRRDLVDWQWMYAAGRMQKPVKILKAYEALAEAQRMNLRSAVRAALLLLPESFSDFDLFTMIAGLSYRGDFRMTFGENPRKVKNIVTSNLPHFHELYSPVLATFSSLTAAAADKGRFSQDLSPRVRASHLRQLPMALRQFLVPRKLRDVMSSERSTKIVHSREEEDKALRDAWEQLSGKKTSKMVKLAIHKVVARSSLTQGFKGVFTAGVWKALVYSLHKMNK 375
BLAST of mRNA_C-linearis_contig76.15228.1 vs. uniprot
Match: A0A8K1FRT3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRT3_PYTOL) HSP 1 Score: 218 bits (556), Expect = 1.680e-62 Identity = 138/319 (43.26%), Postives = 178/319 (55.80%), Query Frame = 3
Query: 57 TELVSAFPAVEFAFAYGSGVVQQKGYAEYVSRPSELPMLDLVLVVKDSKEWHQANLERNGAHYSGLARLAGAGGVARLQQDFGAKLYYNALVPISTTSHRGRPMKYGVVSMKHFAEDLTDWTWLYTAGRLHKPVRIIQGNAQVSGMIQGNLLSAAKASLLLLPERFSAQEFYITVAGLSYTGDFRMYFGENPDKVKNIVSATVGRFQDLYAPTLKGIPGLVATGHDSSSYAQD-VSPTTRMALATALP-----RAVRALLPLDKSGAAGSGLVNGGAPLTAEVSRAFAAVVSKSSLRQGVKGLVTAGVLKSAAYSFAKV 995
T L +AFP V+FA AYGSGV QK + S M+DLV V D K+WH ANLERN HYS L + GA + +Q+++GA LYYN LVP+ + R +KYGVVS K EDLT W LY +GR+HKPV I+ + NL A +LL LPE+FS + ++ +AG+SY GDFRM FGENP KV+NIV A FQ+LY L+ P L + D+ + VSPT L +LP R A D+ A S V RA A+VV++ S Q +KG+VTAG +KS Y K+
Sbjct: 9 TALDAAFPPVQFAMAYGSGVFAQKNHDASTS------MIDLVFAVDDPKQWHAANLERNAGHYSFL-KWFGADTITAVQENYGAGLYYNTLVPLLNPAVGNRLIKYGVVSTKTLCEDLTAWKTLYLSGRMHKPVSILSATDGIHAASAQNLAHAVHYALLCLPEKFSRMDLFMKIAGISYLGDFRMTFGENPRKVRNIVEANYPAFQELYQSHLQNSPFLSPSLSDNDILVSNAVSPTVHTELLDSLPANVARRVGSAERLADRKVAKKS------------VQRAVASVVNRYSRSQSIKGIVTAGAVKSVVYVAQKL 308
BLAST of mRNA_C-linearis_contig76.15228.1 vs. uniprot
Match: A0A482RXJ2_9ARCH (Phosphatidate cytidylyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXJ2_9ARCH) HSP 1 Score: 216 bits (550), Expect = 2.870e-62 Identity = 119/262 (45.42%), Postives = 166/262 (63.36%), Query Frame = 3
Query: 48 EELTELVSAFPAVEFAFAYGSGVVQQKGYAEYVSRPSELPMLDLVLVVKDSKEWHQANLERNGAHYSGLARLAGAGGVARLQQDFGAKLYYNALVPISTTSHRGRPMKYGVVSMKHFAEDLTDWTWLYTAGRLHKPVRIIQGNAQVSGMIQGNLLSAAKASLLLLPERFSAQEFYITVAGLSYTGDFRMYFGENPDKVKNIVSATVGRFQDLYAPTLKGI---PGLVATGHDSSSYAQDVSPTTRMALATALPRAVRALLPL 824
++L +L+ FP+VEFAF+YGSG VQQ GY +Y SELPMLD+++VV+DS+EWH+ N+ RN +HYS L + VA +Q+ A ++NA VPI T GR +KYGV+S KH +DL W LY AGRLHKPV I++ +A +Q N + +LLLLP++F+ + YI VA LSY GD RM GENP KV N+V+ V ++ LY PTL+ I + S +Y Q+V+ + R + LP ++R+LL L
Sbjct: 6 DDLKDLLPIFPSVEFAFSYGSGAVQQGGY-QYKKSASELPMLDIIMVVEDSEEWHRENMLRNPSHYSPLVPM-NYFQVAWVQEKVPANFWFNAYVPIPTGPQAGRLLKYGVISKKHALKDLLHWNNLYLAGRLHKPVHILKSSADFDSALQTNREHVMRTALLLLPDKFTEIDLYIAVASLSYVGDPRMILGENPRKVVNLVAPIVPTYRHLYTPTLEYIGQHAQVTKMNAFSGAYTQNVAQSVRWQMCLDLPSSLRSLLSL 265
BLAST of mRNA_C-linearis_contig76.15228.1 vs. uniprot
Match: A0A5D6YZU9_9STRA (Phosphatidate cytidylyltransferase, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YZU9_9STRA) HSP 1 Score: 213 bits (542), Expect = 2.410e-60 Identity = 134/317 (42.27%), Postives = 180/317 (56.78%), Query Frame = 3
Query: 63 LVSAFPAVEFAFAYGSGVVQQKGYAEYVSRPSELPMLDLVLVVKDSKEWHQANLERNGAHYSGLARLAGAGGVARLQQDFGAKLYYNALVPISTTSHR--GRPMKYGVVSMKHFAEDLTDWTWLYTAGRLHKPVRIIQGNAQVSGMIQGNLLSAAKASLLLLPERFSAQEFYITVAGLSYTGDFRMYFGENPDKVKNIVSATVGRFQDLYAPTLKGIPGLVATGHDSSSY-AQDVSPTTRMALATALPRAVRALLPLDKSGAAGSGLVNGGAPLTA---EVSRAFAAVVSKSSLRQGVKGLVTAGVLKSAAYSFAKV 995
L AFPAV F+ AYGSGV QK + S +LDLV V D WH ANLERN HYS L RL GA G+A Q+++GA +YYN LVP+ + R +KYGVVS++ DL DW LY +GR+HKPV + + + NL A +LL LPE+FS + ++ +AG+SY GDFRM FGENP KV+NIV+ V F++LYA +K P + + DS A+ + L LP A+ A + + GA G G A TA V RA A++V++ S Q +KG+ TAG +K+ Y K+
Sbjct: 13 LREAFPAVAFSMAYGSGVFAQKDHDASSS------LLDLVFAVDDPVAWHAANLERNSGHYS-LLRLLGARGLADFQENYGAGVYYNTLVPLQSADPALGSRMIKYGVVSVQTLCADLRDWRTLYLSGRMHKPVHFLSSSEPIRTAATANLRHALHYALLCLPEKFSETDLFMRIAGISYLGDFRMTFGENPKKVRNIVAGNVAAFRELYASQIKNSPYVDRSLADSGMLVAKTLDRGAHRELLDGLPAAILARM-RQQRGAPGDG-----ADRTATKKRVQRAVASIVNRYSRTQSIKGIATAGAVKTVQYVAQKL 316
BLAST of mRNA_C-linearis_contig76.15228.1 vs. uniprot
Match: A0A6V7IIJ7_9HYME (Phosphatidate cytidylyltransferase, mitochondrial n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7IIJ7_9HYME) HSP 1 Score: 213 bits (543), Expect = 5.640e-60 Identity = 139/352 (39.49%), Postives = 198/352 (56.25%), Query Frame = 3
Query: 42 SDEELTELVSAFPA-VEFAFAYGSGVVQQKGYAEYVSRPSELPMLDLVLVVKDSKEWHQANLERNGAHYSGLARLAGAGGVARLQQDFGAKLYYNALVPISTTSHRGRPMKYGVVSMKHFAEDLTDWTWLYTAGRLHKPVRII---QGNAQVSGMIQGNLLSAAKASLLLLPERFSAQEFYITVAGLSYTGDFRMYFGENPDKVKNIVSATVGRFQDLYAPTLKGIPGLV--ATGHDSSSYA-QDVSPTTRMALATALPRAVRALL-------PLDKSGAAGSGLVNGGAPLTAEVSRAFAAVVSKSSLRQGVKGLVTAGVLKSAAYSFAKVTQAIAGRKNRRQDTPPLE*R 1055
S + ++ FP ++F FAYGSG +QK + P+E MLDLV VV++SK+WH NL+RN HY+ + G +A+LQ++ GA++YYN L+ S+ GR +KYGV+S EDL DW LY AGRLHKPV ++ +Q+ G + NL SA A LL+LPE F+ +FY +A LSY GDFRM FGE+ K+ NIV + F+DLY+P LK V TG D+S+ QD SPT R+ LPR + L P K ++ + +S+ +V KSS+ Q +KG++TAG++KS YS AK+ + + + + LE R
Sbjct: 3 SASPIKRILRDFPRNMKFCFAYGSGAFKQK------TEPTE-NMLDLVFVVRNSKKWHAENLKRNPHHYAQPMKFFGHNWIAKLQENLGARIYYNTLIK----SNDGRLIKYGVISEVSLVEDLLDWNLLYLAGRLHKPVEVLVEPDETSQLRGALVQNLQSAVHAVLLMLPENFTEIDFYKAIAALSYQGDFRMVFGEDKGKIDNIVIPQIQYFRDLYSPILKHFDNYVDIPTGPDASTICHQDTSPTARIHHLNQLPRNPQVQLVRVWSQGPRSKDTEDCLRAISHDPDCSEILSQVLQNIVWKSSVSQSLKGIITAGLVKSVKYSAAKIGKMMKSGERAKPMPKKLEER 343
BLAST of mRNA_C-linearis_contig76.15228.1 vs. uniprot
Match: UPI00143D8A80 (phosphatidate cytidylyltransferase, mitochondrial n=1 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143D8A80) HSP 1 Score: 213 bits (543), Expect = 6.830e-60 Identity = 136/341 (39.88%), Postives = 194/341 (56.89%), Query Frame = 3
Query: 51 ELTELVSAFPA-VEFAFAYGSGVVQQKGYAEYVSRPSELPMLDLVLVVKDSKEWHQANLERNGAHYSGLARLAGAGGVARLQQDFGAKLYYNALVPISTTSHRGRPMKYGVVSMKHFAEDLTDWTWLYTAGRLHKPVRII---QGNAQVSGMIQGNLLSAAKASLLLLPERFSAQEFYITVAGLSYTGDFRMYFGENPDKVKNIVSATVGRFQDLYAPTLKGIPGLVATGHDSSSYA---QDVSPTTRMALATALPRA-----VRA--LLPLDKSGAAGSGLVNGGAPLTAEVSRAFAAVVSKSSLRQGVKGLVTAGVLKSAAYSFAKVTQAIAGRKNRRQ 1031
+ ++ FP ++F FAYGSG +Q S P+E MLDL+ VV++ WH NL RN +HY+ R G + +LQ+ +GAK+YYN LV S GR +KYGV+S EDL DW LY +GRLHKPV+++ ++ + + NL SA A+LLLLPE F+ +FY T+AGLSY GDFRM FGE+ +KVKNIV + +F++LYAP LK V H + QD P+TR+ LPRA VRA L P K + + + + +V KSS+ Q +KG++TAG+ KS YS+AK+ + ++ + ++Q
Sbjct: 10 QFKRILRDFPRNMKFCFAYGSGTFKQ------TSDPNE-NMLDLIFVVRNPNRWHAENLSRNPSHYAQPLRFLGYKAITKLQESWGAKVYYNTLVKTS----EGRTIKYGVISEISLVEDLLDWNLLYLSGRLHKPVQVLIEPDEDSDLRTALLQNLHSAVHAALLLLPEHFTETDFYRTIAGLSYNGDFRMTFGEDKNKVKNIVIPQLKQFRELYAPILKHFDKYVEIPHSEDAAIMCRQDTGPSTRIHHLNQLPRAPQVKLVRAWSLGPRSKDTEDCLRALAHDPDCSETLDQCLREIVWKSSVSQSLKGILTAGLYKSVKYSWAKIVKMMSSNEQKKQ 339
BLAST of mRNA_C-linearis_contig76.15228.1 vs. uniprot
Match: Q7PQL6_ANOGA (Phosphatidate cytidylyltransferase, mitochondrial n=17 Tax=Cellia TaxID=44534 RepID=Q7PQL6_ANOGA) HSP 1 Score: 211 bits (537), Expect = 1.760e-59 Identity = 135/329 (41.03%), Postives = 190/329 (57.75%), Query Frame = 3
Query: 63 LVSAFP-AVEFAFAYGSGVVQQKGYAEYVSRPSELPMLDLVLVVKDSKEWHQANLERNGAHYSGLARLAGAGGVARLQQDFGAKLYYNALVPISTTSHRGRPMKYGVVSMKHFAEDLTDWTWLYTAGRLHKPVRIIQG--NAQVSGMIQGNLLSAAKASLLLLPERFSAQEFYITVAGLSYTGDFRMYFGENPDKVKNIVSATVGRFQDLYAPTLKGIPG---LVATGHDSSSYAQDVSPTTRMALATALPR-AVRALLPLDKSGAAGSGL------VNGGAPLTAEVSRAFAAVVSKSSLRQGVKGLVTAGVLKSAAYSFAKVTQAIA 1010
L+S FP F FAYGSGV QQ GY S+ + M+DL+ VV ++ WH ANL++N HYS + RL G G +A+ Q+ FGA++Y+N LV I +KYGVVS K EDLTDW LY AGRLHKPV II+ ++++ ++ NL SA A+LLLLPE+F+ E Y ++ LSY+GDFRM FGEN DKV NIV + F++LY+ T + G L G D+ QD++ T +A LP+ +R ++ SG V+ + V+ ++V SS+ Q +K + TAG +KS YS+AK + +
Sbjct: 14 LLSKFPQGFSFCFAYGSGVKQQLGYESVRSKRN---MIDLIYVVDNAHRWHTANLDQNFEHYSSM-RLLGGGLIAKYQESFGARVYFNTLVQIP---EEDVIIKYGVVSTKDLLEDLTDWRCLYLAGRLHKPVEIIRNASSSKIQNAMEQNLRSAVHAALLLLPEKFTEFELYRAISNLSYSGDFRMIFGENKDKVNNIVRPQLENFRNLYSATFEEFRGCLELPIAGSDNQICTQDLAEPTILAHLNGLPKWPIRLIVERQTSGRYRQDTEDILIGVSRATNYQSIVASCLRSIVWSSSVWQSIKNIPTAGFVKSVRYSWAKALKTFS 335
BLAST of mRNA_C-linearis_contig76.15228.1 vs. uniprot
Match: A0A0P1AA10_PLAHL (Phosphatidate cytidylyltransferase, mitochondrial n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AA10_PLAHL) HSP 1 Score: 210 bits (535), Expect = 2.300e-59 Identity = 128/316 (40.51%), Postives = 177/316 (56.01%), Query Frame = 3
Query: 54 LTELVSA-FPAVEFAFAYGSGVVQQKGYAEYVSRPSELPMLDLVLVVKDSKEWHQANLERNGAHYSGLARLAGAGGVARLQQDFGAKLYYNALVPISTTSHRGRPMKYGVVSMKHFAEDLTDWTWLYTAGRLHKPVRIIQGNAQVSGMIQGNLLSAAKASLLLLPERFSAQEFYITVAGLSYTGDFRMYFGENPDKVKNIVSATVGRFQDLYAPTLKGIPGLVATGHDSSSY-AQDVSPTTRMALATALPRAVRALLPLDKSGAAGSGLVNGGAPLTAEVSRAFAAVVSKSSLRQGVKGLVTAGVLKSAAYSFAKV 995
LTE V A FP V FA AYGS V QQK + S M+DLV V D+++WH+ N+ERN HYS + R GA +A Q++FGA LYYN LVP++ R +KYGV+S + +DL W LY +GR+HKPV I+ N + NL A +LL LPE+FS + Y+ +AG+SY GDFRM FGENP KV+NIV + FQ LY ++ P ++ + DS++ A + R + ALP V L + G ++ ++ R A++V +SS Q +KG+ TAG KS Y K+
Sbjct: 7 LTEAVDASFPHVAFAMAYGSSVFQQKNHNASAS------MIDLVFAVDDAQDWHKQNIERNPKHYS-MLRYLGAANIAAFQENFGAGLYYNTLVPLTGKLLGTRLVKYGVISSQALCQDLQSWKTLYLSGRMHKPVSILVTNELIKTASSINLSHALNYALLCLPEKFSEHDLYMKIAGISYLGDFRMVFGENPKKVRNIVDGNLQMFQKLYQHHIRNSPFIMRSITDSNTLLAHNSDLKVRQTILDALPSNVLERLAIKSRKRRG---IDSRTITKKQLQRVIASIVFRSSRSQSIKGIATAGCFKSIVYVSQKL 312 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig76.15228.1 >prot_C-linearis_contig76.15228.1 ID=prot_C-linearis_contig76.15228.1|Name=mRNA_C-linearis_contig76.15228.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=349bp MGGDAPRLTQFLSDEELTELVSAFPAVEFAFAYGSGVVQQKGYAEYVSRPback to top mRNA from alignment at C-linearis_contig76:802597..807287+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig76.15228.1 ID=mRNA_C-linearis_contig76.15228.1|Name=mRNA_C-linearis_contig76.15228.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4691bp|location=Sequence derived from alignment at C-linearis_contig76:802597..807287+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig76:802597..807287+ >mRNA_C-linearis_contig76.15228.1 ID=mRNA_C-linearis_contig76.15228.1|Name=mRNA_C-linearis_contig76.15228.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2094bp|location=Sequence derived from alignment at C-linearis_contig76:802597..807287+ (Chordaria linearis ClinC8C monoicous)back to top |