mRNA_C-linearis_contig76.15176.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig76.15176.1
Unique NamemRNA_C-linearis_contig76.15176.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig76.15176.1 vs. uniprot
Match: D7FVV1_ECTSI (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV1_ECTSI)

HSP 1 Score: 557 bits (1436), Expect = 7.030e-195
Identity = 295/353 (83.57%), Postives = 308/353 (87.25%), Query Frame = 2
Query:   44 MSTSNVLPVLLVLLSFIAPTARGFLPHASPRALL----YDHRGNLSVRRATSVV----SMSSAKTSSAADKLRDLLSGPEILIMPCCYDGLTARLVEQAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLNDIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDARYVQTGADILVMARTDARAGLGLEEALERCKEFRRIGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPPAELQKMGYTIAAYPLSLLSASIKAMNSALERLKAGEPLDDLLEGFEEVQKVVGFRNYDATAEKYKID 1078
            MS+ N LP+LLVL+S  A   +  LP       L      H G  S RR  S      +MSSAKTSSAADKLRDLLS PEIL MPCCYDGLTARLVE AGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNIC+TL DIPCIGDGDTGYGN+VNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDAR    GADIL+MARTDARAGLGLEEALERCKEFR+IGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPP EL+KMGY IAAYPLSLLSASIKAMNS LERLKAGEPLDDLLEGFEEVQ+VVGFR+YD+TAEKYKID
Sbjct:    1 MSSCNTLPLLLVLVSICALRVKALLPSTLTSGSLPFGRVHHGGCSSSRRTISKAGAGTAMSSAKTSSAADKLRDLLSRPEILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICATLRDIPCIGDGDTGYGNSVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDAR--DEGADILIMARTDARAGLGLEEALERCKEFRKIGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPPVELEKMGYAIAAYPLSLLSASIKAMNSTLERLKAGEPLDDLLEGFEEVQRVVGFRDYDSTAEKYKID 351          
BLAST of mRNA_C-linearis_contig76.15176.1 vs. uniprot
Match: W7TTL0_9STRA (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTL0_9STRA)

HSP 1 Score: 406 bits (1043), Expect = 2.570e-135
Identity = 208/291 (71.48%), Postives = 238/291 (81.79%), Query Frame = 2
Query:  206 AKTSSAADKLRDLLSGPEILIMPCCYDGLTARLVEQAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLNDIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDARYVQTGADILVMARTDARAGLGLEEALERCKEFRRIGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPPAELQKMGYTIAAYPLSLLSASIKAMNSALERLKAGEPLDDLLEGFEEVQKVVGFRNYDATAEKYKID 1078
            A ++S A KLR+LL   +ILIMPCCYDGLTARLVEQ GFPLTFMTGFGVS A G PDTQLLSYAEM+ +A  I   L+ IPCIGDGDTGYGNAVNVKRTV GYAQ G+AGIMIEDQVAPK+CGHTKGK+ V REEA++RV+AA DAR    GADIL+MARTDARAGLG++EA+ RC++FR IGADITFLEAP SEEEMRRYCQEV+GPKLANML+ G+TP+LPPA+LQ+MGYTI AYPL+LLSA IKAM + L   K G+  + LL  FEE + VVGF  Y A  EK   D
Sbjct:   50 AASTSPATKLRNLLQQNDILIMPCCYDGLTARLVEQHGFPLTFMTGFGVSAARGHPDTQLLSYAEMVDNARQISEALHTIPCIGDGDTGYGNAVNVKRTVGGYAQAGLAGIMIEDQVAPKKCGHTKGKSCVSREEAFARVQAAVDAR--NEGADILIMARTDARAGLGMDEAIYRCQKFREIGADITFLEAPHSEEEMRRYCQEVEGPKLANMLQNGRTPVLPPAKLQEMGYTIVAYPLALLSAGIKAMRTVLTLAKDGKEFEHLLADFEETKAVVGFPAYYAAEEKAAAD 338          
BLAST of mRNA_C-linearis_contig76.15176.1 vs. uniprot
Match: A0A835ZB25_9STRA (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB25_9STRA)

HSP 1 Score: 394 bits (1013), Expect = 5.160e-131
Identity = 205/301 (68.11%), Postives = 238/301 (79.07%), Query Frame = 2
Query:  182 TSVVSMSSAKTSSAADKLRDLLSGPE----ILIMPCCYDGLTARLVEQAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLNDIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDARYVQTGADILVMARTDARAGLGLEEALERCKEFRRIGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPPAELQKMGYTIAAYPLSLLSASIKAMNSALERLKAGEPLDDLLEGFEEVQKVVGFRNYDATAEKYK 1072
            T   S S A   S   KLR+LL+  E     LIMPCCYDGLTARLVEQ GFPLTFMTGFGVS +HG PDTQL+SYAEM   A  I + L+ IPCIGDGDTGYGNAVNVKRTV+GYAQ G+A IMIEDQV+PK+CGHT+GK VVGR EA +RV+AACDAR    GADIL++ARTDAR  LG+ EALERC+EF+RIGADI FLEAP+S +EM+++C EV GPKLANMLE GKTPIL P EL  MG+ IAAYPL+LLSAS++AM  AL+RLKAGE  DDLL  F+EVQ  VGF +Y A  ++Y+
Sbjct:   39 TRAASASGAPRLSNTGKLRELLAEQERTGEALIMPCCYDGLTARLVEQGGFPLTFMTGFGVSASHGFPDTQLISYAEMQQRALEIIAALDSIPCIGDGDTGYGNAVNVKRTVRGYAQAGLAAIMIEDQVSPKKCGHTRGKDVVGRAEALARVQAACDAR--DEGADILILARTDARGPLGMREALERCQEFKRIGADIIFLEAPESVQEMQQFCDEVPGPKLANMLEHGKTPILSPKELGAMGFAIAAYPLTLLSASMRAMRFALQRLKAGESCDDLLLPFQEVQAGVGFPDYWAEEDRYR 337          
BLAST of mRNA_C-linearis_contig76.15176.1 vs. uniprot
Match: A0A0G4G948_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G948_VITBC)

HSP 1 Score: 379 bits (973), Expect = 1.260e-125
Identity = 185/283 (65.37%), Postives = 227/283 (80.21%), Query Frame = 2
Query:  221 AADKLRDLLSGPEILIMPCCYDGLTARLVEQAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLNDIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDARYVQTGADILVMARTDARAGLGLEEALERCKEFRRIGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPPAELQKMGYTIAAYPLSLLSASIKAMNSALERLKAGEPLDDLLEGFEEVQKVVGFRNYDATAEKY 1069
            +AD+LR LL G +IL+MPCCYD LTA+L+E+AGFPLTFM+GF VS A G PDTQL+SY EM+ +  +IC+TL   P IGDGD GYGN VNVKRTVKGYAQ G A +MIEDQVAPKRCGHTKGK V+  E+A  +++AA DAR    G DIL++ARTDARA  GL+EA+ RC+ FRR+GADITFLEAPQ+EEEMRRYC EVDGPKLANMLE GK+PI+PP ELQ +G+ I AYPL+LLS+ IKAM +AL+ LKAG+P D  +  FE+++ +VGF +Y    E+Y
Sbjct:    5 SADRLRRLLEGADILVMPCCYDALTAKLIEEAGFPLTFMSGFSVSAARGFPDTQLISYQEMVDTCASICATLKTTPLIGDGDNGYGNPVNVKRTVKGYAQAGAACVMIEDQVAPKRCGHTKGKDVISYEDACMKIQAAVDAR--NEGRDILILARTDARATHGLDEAIRRCQAFRRLGADITFLEAPQTEEEMRRYCTEVDGPKLANMLEGGKSPIIPPKELQAIGFKIVAYPLTLLSSGIKAMKNALDALKAGKPTDSYILPFEDLRAIVGFEDYYKEEERY 285          
BLAST of mRNA_C-linearis_contig76.15176.1 vs. uniprot
Match: A0A7S1XX81_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX81_9STRA)

HSP 1 Score: 376 bits (966), Expect = 3.930e-124
Identity = 208/309 (67.31%), Postives = 243/309 (78.64%), Query Frame = 2
Query:  197 MSSAKTSSAADKLRDLLSGP--EILIMPCCYDGLTARLVEQAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLND--IPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDAR--YVQTGA-DILVMARTDARAGLGLEEALERCKEFRRIGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPPAELQKMGYTIAAYPLSLLSASIKAMNSALERLKA--GEP------LDDL-LEGFEEVQKVVGFRNYDATAEKYKI 1075
            +++A   S A++LR LLS P  +IL MPCCYDGLTA+LV +AGFPLTFMTGFGVS A G PDT L+SYAEM ASA +I + L    IPCIGDGDTGYGNA+NVKRTV+GYA  G+A IMIEDQVAPKRCGHTKGK+V  REEA+SRV+AACDAR   V  GA DIL++ARTDAR  LGL+EA+ERC++FR IGADITFLEAPQ+ EEMRRYC EV GPKLANMLE GKTPIL PAEL  +G++IAAYPL+LLSA+IKA  +AL  LKA   +P      +DDL L+ FE VQ VVGF  Y    E+Y+I
Sbjct:   15 LAAAAALSPANRLRGLLSDPNRKILSMPCCYDGLTAKLVARAGFPLTFMTGFGVSAARGFPDTGLVSYAEMEASARDITAALRPYGIPCIGDGDTGYGNAINVKRTVQGYAATGLAAIMIEDQVAPKRCGHTKGKSVTNREEAFSRVQAACDARDELVAQGANDILILARTDARGPLGLDEAIERCQKFREIGADITFLEAPQTVEEMRRYCTEVTGPKLANMLEQGKTPILSPAELADVGFSIAAYPLTLLSAAIKAQENALALLKATYDDPDTPTPSVDDLGLQTFENVQDVVGFPKYWDEEERYRI 323          
BLAST of mRNA_C-linearis_contig76.15176.1 vs. uniprot
Match: A0A0G4I971_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I971_9ALVE)

HSP 1 Score: 371 bits (953), Expect = 2.290e-122
Identity = 196/300 (65.33%), Postives = 231/300 (77.00%), Query Frame = 2
Query:  209 KTSSAADKLRDLLSGPEILIMPCCYDGLTARLVEQAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLND-IPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDARY------VQTGADILVMARTDARAGLGLEEALERCKEFRRIGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPPAELQKMGYTIAAYPLSLLSASIKAMNSALERLKAGEPLD---DLLEGFEEVQKVVGFRNYDATAEKYKID 1078
            KT + A +LR LLS  + L+MPCCYDG+TARLVE  GFPLTFMTGFGVS + G PD QL+S+ EML+SAT I + L    PCI DGDTGYGNAVNVKRTV+GYAQVGMAG+MIEDQVAPKRCGHT+ K VVG +EA +RVRAACDAR       +  G DI VMARTDA   L  EEAL RC+ FR  GADITFLEAP+S EEM+RYC+EV+GPKLANM+E GKTP+LPP+ELQKMGY+IAAYP+SLLSASI AM  ALE++  GE L+   D+L  F +V + VGF +Y     +YK +
Sbjct:   12 KTVTPAGRLRALLSENKTLVMPCCYDGITARLVEDGGFPLTFMTGFGVSASRGFPDAQLVSFGEMLSSATTIVAALRKGTPCIADGDTGYGNAVNVKRTVRGYAQVGMAGVMIEDQVAPKRCGHTRVKAVVGFDEALARVRAACDARDEIRSAGLYGGNDICVMARTDANNALDFEEALRRCRAFREAGADITFLEAPKSIEEMKRYCEEVEGPKLANMVEGGKTPVLPPSELQKMGYSIAAYPVSLLSASIGAMRGALEKIHKGEKLEEGKDILP-FSDVCRQVGFEDYWEEEARYKTE 310          
BLAST of mRNA_C-linearis_contig76.15176.1 vs. uniprot
Match: A0A7S2SD78_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD78_9STRA)

HSP 1 Score: 372 bits (955), Expect = 4.060e-122
Identity = 189/287 (65.85%), Postives = 223/287 (77.70%), Query Frame = 2
Query:  230 KLRDLLSGP----EILIMPCCYDGLTARLVEQAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLNDIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDARYV--QTGADILVMARTDARAGLGLEEALERCKEFRRIGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPPAELQKMGYTIAAYPLSLLSASIKAMNSALERLKAGEPLDDLLEGFEEVQKVVGFRNYDATAEKYK 1072
            +LR+LL        +L+MPCCYDGLTARLVE AGFPLTFMTGFGVS  HG+PDTQLLSY EM A+A  I S+L  IPCIGDGDTGYGN +NV+RTV GY QVG+AGIM+EDQV+PKRCGH  GK+VVGREEA  R+RAA  AR      G D++++ARTDAR   G++EA+ERC+ FR  GADITFLEAP+S EEMR YC +V+GPKLANMLE G TPILPP EL +MGYTIAAYPLSLL+ASI AM+ AL RL  GEPLDD+L  F   ++ VGF  Y    E+++
Sbjct:   62 RLRELLDAQPQSGSVLLMPCCYDGLTARLVENAGFPLTFMTGFGVSAVHGVPDTQLLSYGEMQAAARVITSSLQAIPCIGDGDTGYGNPMNVQRTVHGYHQVGLAGIMLEDQVSPKRCGHVAGKSVVGREEAVQRIRAAVLAREEIRAQGGDMIILARTDARGTDGMDEAIERCRRFREEGADITFLEAPESVEEMREYCDKVEGPKLANMLENGLTPILPPKELAEMGYTIAAYPLSLLAASIHAMDQALSRLALGEPLDDILCSFSRTKEAVGFSEYAKREEQFR 348          
BLAST of mRNA_C-linearis_contig76.15176.1 vs. uniprot
Match: A0A1V9ZZC3_9STRA (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZC3_9STRA)

HSP 1 Score: 360 bits (925), Expect = 1.910e-118
Identity = 183/287 (63.76%), Postives = 228/287 (79.44%), Query Frame = 2
Query:  224 ADKLRDLLSGPE-ILIMPCCYDGLTARLVEQAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLNDIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDARYVQTGADILVMARTDARAGLGLEEALERCKEFRRIGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPPAELQKMGYTIAAYPLSLLSASIKAMNSALERLKAGEPLDDLLEG---FEEVQKVVGFRNYDATAEKYK 1072
            A+++R LLS P+  +++PCCYDGLTARL+E+AGF  TFMTGFGVS  HG PDTQL+SY EM+ASA  ICS+L  IPCIGDGDTGYGNAVNVKRTVKGY Q G+AGIM+EDQV PKRCGHTKGK VV REEAY R++AA DAR  ++G DI+++ARTDARA   LEEA+ RC+EF+R+GADITFLEAP+S EEM+R C+EV G K+ANM+E G TPILP  +L  MGY + AYPL++L ASI+AMN+AL+ LK      +L++    F++++  VGF  Y A  EKY+
Sbjct:    5 ANQIRQLLSRPDRSVVLPCCYDGLTARLIERAGFECTFMTGFGVSAVHGFPDTQLISYEEMVASARRICSSLQSIPCIGDGDTGYGNAVNVKRTVKGYIQAGLAGIMLEDQVMPKRCGHTKGKQVVSREEAYIRIQAAVDARR-ESGQDIVIIARTDARATHSLEEAIARCQEFQRLGADITFLEAPRSIEEMQRVCKEVPGWKMANMVEHGVTPILPINQLHDMGYQLIAYPLTILGASIQAMNTALKHLKELGHTPELVQSLATFDQIKADVGFDEYYAEEEKYR 290          
BLAST of mRNA_C-linearis_contig76.15176.1 vs. uniprot
Match: A0A7S0H967_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0H967_9EUKA)

HSP 1 Score: 354 bits (909), Expect = 7.170e-116
Identity = 179/283 (63.25%), Postives = 218/283 (77.03%), Query Frame = 2
Query:  230 KLRDLLSGPEILIMPCCYDGLTARLVEQAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLNDIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDARYVQTGADILVMARTDARAGLGLEEALERCKEFRRIGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPPAELQKMGYTIAAYPLSLLSASIKAMNSALERLKAGEPLDDLLEGFEEVQKVVGFRNYDATAEKYKID 1078
            +LR LL  P I +MPCC+D L+ARLVEQAGFPLTF++GF  S A GLPDT L+SYAEML +   +   L +IPC+GDGDTGYGNAVN KRTV+GYA+ GMAGIMIEDQVAPKRCGHT+ K V+GR EA +RVRAA DA   +   DI+++ARTDARA  GLEEA+ RC+ F   GADITFLEAP S EEM RYC EV GPK+AN+L  G TP+LPPAEL+ MGY+IAA+PL L++ASI +M +ALE LK G+P   L   FEE+Q+VVGF  Y A   +Y+++
Sbjct:   14 RLRTLLQTPGIKLMPCCHDALSARLVEQAGFPLTFVSGFAASAARGLPDTGLMSYAEMLEAMRGVGGALREIPCMGDGDTGYGNAVNTKRTVQGYARAGMAGIMIEDQVAPKRCGHTRDKAVIGRAEAVARVRAAVDAAR-EGQDDIVILARTDARATHGLEEAIARCQAFHEAGADITFLEAPHSREEMERYCAEVPGPKMANLLAGGLTPVLPPAELEAMGYSIAAFPLDLINASIISMRAALEGLKHGKPPPALSLPFEELQEVVGFPEYYAEEARYRVE 295          
BLAST of mRNA_C-linearis_contig76.15176.1 vs. uniprot
Match: L1JQK1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQK1_GUITC)

HSP 1 Score: 353 bits (906), Expect = 2.410e-115
Identity = 186/302 (61.59%), Postives = 235/302 (77.81%), Query Frame = 2
Query:  176 RATSVVSMSSAKTSSAADKLRDLLSGPEILIMPCCYDGLTARLVEQAGFPLTFMTGFGVSGAH-GLPDTQLLSYAEMLASATNICSTLNDIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDARYVQTGADILVMARTDARAGLGLEEALERCKEFRRIGADITFLEAPQSEEEMRRYCQEVDG-PKLANMLEFGKTPILPPAELQKMGYTIAAYPLSLLSASIKAMNSALERLKAGEPLDDLLEGFEEVQKVVGFRNYDATAEKYKI 1075
            RA+S V +  A+ S A +KLR LL  P IL+MPCC+DGL+A+LV++AGF LTFM+GF  S A  GLPDT  +SY EM+ +  +ICS ++ IP IGDGDTGYGNA+NVKRTV+GYAQ G A +MIEDQVAPKRCGHT+GK VV REEA  RV+AA DAR    GADIL++ARTDAR  + ++EALER + + ++GADI FLEAPQS EEM+ +C+     PKLANMLE GKTP+LPP EL+KMGY IAAYPL+L+S ++KAMN ALE LK G P+DD+L+ F E++ +VGF +Y A  E+YK+
Sbjct:   11 RASSHVLVCKAEES-APNKLRKLLKQPGILVMPCCFDGLSAKLVQRAGFDLTFMSGFATSAAKLGLPDTGYMSYGEMVDAGRDICSAVS-IPVIGDGDTGYGNAMNVKRTVRGYAQAGFASVMIEDQVAPKRCGHTRGKQVVSREEAIQRVQAAVDAR--DEGADILILARTDARGCISMDEALERVRLYEKVGADIVFLEAPQSIEEMKMHCEAAPNTPKLANMLEGGKTPVLPPKELEKMGYKIAAYPLTLVSTAVKAMNKALESLKEGRPVDDILD-FAELRDIVGFNDYYAEEERYKL 307          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVV1_ECTSI7.030e-19583.57Carboxyvinyl-carboxyphosphonate phosphorylmutase n... [more]
W7TTL0_9STRA2.570e-13571.48Carboxyvinyl-carboxyphosphonate phosphorylmutase n... [more]
A0A835ZB25_9STRA5.160e-13168.11Carboxyvinyl-carboxyphosphonate phosphorylmutase n... [more]
A0A0G4G948_VITBC1.260e-12565.37Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S1XX81_9STRA3.930e-12467.31Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A0G4I971_9ALVE2.290e-12265.33Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S2SD78_9STRA4.060e-12265.85Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1V9ZZC3_9STRA1.910e-11863.76Carboxyvinyl-carboxyphosphonate phosphorylmutase n... [more]
A0A7S0H967_9EUKA7.170e-11663.25Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
L1JQK1_GUITC2.410e-11561.59Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:311327..314258 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score564.7
Seed ortholog evalue3e-158
Seed eggNOG ortholog2880.D7FVV1
KEGG rclassRC00286,RC00287
KEGG koko:K03417
KEGG ReactionR00409
KEGG Pathwayko00640,map00640
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.isocitrate lyase activity
EggNOG OGsCOG2513@1,KOG1260@2759
Ec32 ortholog descriptioncarboxyvinyl-carboxyphosphonate phosphorylmutase
Ec32 orthologEc-01_002250.1
EC4.1.3.30
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size1673
Cds size1038
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15176.1prot_C-linearis_contig76.15176.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig76 311919..314215 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930444.2210128-UTR-C-linearis_contig76:311326..3119181622930444.2210128-UTR-C-linearis_contig76:311326..311918Chordaria linearis ClinC8C monoicousUTRC-linearis_contig76 311327..311918 -
1690881072.540839-UTR-C-linearis_contig76:311326..3119181690881072.540839-UTR-C-linearis_contig76:311326..311918Chordaria linearis ClinC8C monoicousUTRC-linearis_contig76 311327..311918 -
1622930444.3609953-UTR-C-linearis_contig76:314215..3142581622930444.3609953-UTR-C-linearis_contig76:314215..314258Chordaria linearis ClinC8C monoicousUTRC-linearis_contig76 314216..314258 -
1690881072.6225467-UTR-C-linearis_contig76:314215..3142581690881072.6225467-UTR-C-linearis_contig76:314215..314258Chordaria linearis ClinC8C monoicousUTRC-linearis_contig76 314216..314258 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930444.241002-CDS-C-linearis_contig76:311918..3121491622930444.241002-CDS-C-linearis_contig76:311918..312149Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 311919..312149 -
1690881072.5541387-CDS-C-linearis_contig76:311918..3121491690881072.5541387-CDS-C-linearis_contig76:311918..312149Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 311919..312149 -
1622930444.2582405-CDS-C-linearis_contig76:312449..3126411622930444.2582405-CDS-C-linearis_contig76:312449..312641Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 312450..312641 -
1690881072.5641186-CDS-C-linearis_contig76:312449..3126411690881072.5641186-CDS-C-linearis_contig76:312449..312641Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 312450..312641 -
1622930444.2731924-CDS-C-linearis_contig76:312859..3129971622930444.2731924-CDS-C-linearis_contig76:312859..312997Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 312860..312997 -
1690881072.574148-CDS-C-linearis_contig76:312859..3129971690881072.574148-CDS-C-linearis_contig76:312859..312997Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 312860..312997 -
1622930444.2964523-CDS-C-linearis_contig76:313237..3133751622930444.2964523-CDS-C-linearis_contig76:313237..313375Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 313238..313375 -
1690881072.583976-CDS-C-linearis_contig76:313237..3133751690881072.583976-CDS-C-linearis_contig76:313237..313375Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 313238..313375 -
1622930444.320975-CDS-C-linearis_contig76:313543..3136371622930444.320975-CDS-C-linearis_contig76:313543..313637Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 313544..313637 -
1690881072.5964227-CDS-C-linearis_contig76:313543..3136371690881072.5964227-CDS-C-linearis_contig76:313543..313637Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 313544..313637 -
1622930444.344013-CDS-C-linearis_contig76:313970..3142151622930444.344013-CDS-C-linearis_contig76:313970..314215Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 313971..314215 -
1690881072.6107123-CDS-C-linearis_contig76:313970..3142151690881072.6107123-CDS-C-linearis_contig76:313970..314215Chordaria linearis ClinC8C monoicousCDSC-linearis_contig76 313971..314215 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig76.15176.1

>prot_C-linearis_contig76.15176.1 ID=prot_C-linearis_contig76.15176.1|Name=mRNA_C-linearis_contig76.15176.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=346bp
MSTSNVLPVLLVLLSFIAPTARGFLPHASPRALLYDHRGNLSVRRATSVV
SMSSAKTSSAADKLRDLLSGPEILIMPCCYDGLTARLVEQAGFPLTFMTG
FGVSGAHGLPDTQLLSYAEMLASATNICSTLNDIPCIGDGDTGYGNAVNV
KRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDA
RYVQTGADILVMARTDARAGLGLEEALERCKEFRRIGADITFLEAPQSEE
EMRRYCQEVDGPKLANMLEFGKTPILPPAELQKMGYTIAAYPLSLLSASI
KAMNSALERLKAGEPLDDLLEGFEEVQKVVGFRNYDATAEKYKID*
back to top

mRNA from alignment at C-linearis_contig76:311327..314258-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig76.15176.1 ID=mRNA_C-linearis_contig76.15176.1|Name=mRNA_C-linearis_contig76.15176.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2932bp|location=Sequence derived from alignment at C-linearis_contig76:311327..314258- (Chordaria linearis ClinC8C monoicous)
GTCAAGGAGATTGGGATTGCAAAGCAGATTCAGTGCTCTCCAGATGTCGA CCAGTAATGTCCTGCCGGTTCTTTTGGTGCTGCTCTCCTTCATCGCGCCA ACCGCCCGTGGCTTCCTACCGCACGCTTCACCGAGAGCACTGCTATATGA CCACCGCGGGAACCTTAGCGTGCGCAGGGCAACCTCTGTCGTCAGCATGT CCTCCGCGAAGACCAGCAGCGCTGCTGACAAGCTCCGCGATCTACTCAGC GGCCCAGAAATCCTCATCATGCCGTGCTGCTACGATGGGTAAGGGTTGGG CGGGAAAAGTACTTACAACGTACAGAGAAGTTTGTGGACGGATTTATACT ACAGCGGTTTTCACGAAAGAGAGGATCACCGCACATCTTTTGTACACAAG TTGTCCACTTGAGTTGAGATCATCTCCACTTTCAATCGATATCGGACTAT TTTGCTCTGCTCCATCTTCTCCCCGCTCTTCATGATAATCATAATTTTAA TTTTGACTATCATGAAGAGCGGGGAGTAGATGGAGCAGATATTACTTTGG CGTGTAGCCTACTCTCGTACTCCGCAACGACGAAGTAACCGTCGCTGTTG TATGTGTGTTGGATGAAACAGCCTCACGGCACGGCTGGTGGAACAAGCTG GGTTCCCGCTCACGTTCATGACAGGCTTCGGGGTCTCTGGTGCGCACGGA CTGCCCGACACCCAGGTAAGCCTACGCTAGAAAAGCAGCAATTGCCTTTT GAGGAAATCGACCGCTCTTCGACGCTCAGAAGGTGCATGTTCTTTGCAAC TGACTAATAACCGTGCAGATATTAACCCCTGCGAGTGTGTGTGCGTGTGC GCTGGTTTCGATCCGGCCCAATTCGACCTGTAGCTCCTGTCGTACGCTGA GATGCTTGCCTCGGCCACCAACATCTGCTCCACCTTGAACGACATCCCGT GCATCGGGGACGGAGACACCGGGTACGGGAACGCCGTCAACGTCAAGCGA ACGGTCAAAGGCTACGCGCAGGTCAGCAGTATCTACGCGTGATCTGGTTG CGACAAGGATTAAAAGCAAAAGAAAAAACGTCTCGCTATCCTCGCATCTT ATTGGAGCGGCTATTTAGCCATGGATGTCTCTAGAGCCGCAGGCAGTCGC AGGCAGTCGCACCCACGATAGTGCATTCATTCATGTTCCCTTTGCTTTCG ATTTGCCTTGATACCACACTACACCGCTCTACTCTCTACCGCATCTATGG CGGCGACACAGGTGGGCATGGCCGGCATCATGATAGAGGACCAGGTAGCC CCGAAGCGCTGCGGCCACACGAAAGGCAAGACCGTTGTGGGGAGGGAAGA GGCCTACAGCCGCGTCAGGGCTGCGTGCGACGCCAGGTATGTGCAGACCG TACATCGACGACGATGATGCTTGCGGTGTCGGTCTGGTTGTGCGCTACGT TATACCACTCGTGCTTGTTGCTGCTCAGAAGCGGTGCTGCTGCATGTAGT TGTGTTGGCGAGCGGGACTCGCTGGAGAATGGCCTCTGCTGTTGTCGGTT GCTGCTGCTGTGTTGACAACACCCCCCCACCCCACCCCGTCTAATTTTCC ATTTTTTCAGGGATGAGGGTGCAGACATCCTCGTCATGGCCCGCACAGAT GCTCGGGCTGGTCTGGGGCTGGAGGAGGCGCTCGAGAGGTGCAAAGAGTT CAGGAGAATCGGGGCGGACATTACCTTCCTGGAGGCCCCGCAGAGCGAGG AGGAGATGCGGCGATACTGCCAGGAGGTGGACGGCCCCAAGCTCGCCAAC ATGCTAGAGGTGCAGCATAATTTTGGCGGATTTCCCCCCCGTCTTATTCT TCGGTTCACACATTTGTTTTGTATTTGTTCGTGATCTTTGGTGTTGCTTT TTGTCTTGAAGAACCCAGGATTTGCGTATTCCCAGGGTGCTTGCCTATTC CACGCGCGAAAAAACATACCTACGAAGTATACTAACTGATGGATTTTATT TTATCGCTAACCGAGTCCAACACCGACAGCTTCCTTTTCATCGTGCACTG ACATAATTTGCTGTTTCCCTTGGCTTTCGCACGCGTGAAAATCGCTCGCT GTTAATCAGTTCGGCAAGACTCCCATCCTGCCCCCCGCCGAGCTTCAGAA GATGGGCTACACCATCGCGGCGTATCCGCTCAGCTTGCTGAGCGCGAGCA TCAAGGCCATGAACTCGGCGCTGGAGAGGCTCAAGGCGGGGGAGCCTCTG GACGACCTGTTGGAGGGCTTCGAGGAGGTCCAGAAAGTTGTTGGGTTCAG GAACTACGATGCCACGGCGGAGAAGTATAAAATTGACTAGGACTGAACAC ATTTACGTCGCTACAGCGAAAGGGTAGCAGAACCCACACGAGTATAGTAA TTGTGATGTATGTGAGGTATGTAGTCAAGTCCTGCTCCTCTTTTCCCTGT TTCGGGGCGATGCTCTCGCAGAATTAGGGCACGGACAGTTCCTTGCCACG TGTTGCGCGCTCTAAACGCTCTAGGGGTGGTCGTAGCCGTAGATTTTAGA GGATGAGGTGGCGGCAGCAAGTTGGGACCGTCCGTGCCTGACAAGGAGGC TTTTGTTTGGGGCGTGTGGCTCCGCAATCCGTAGACTCTGTTTTGAGCAG GGATATAGGGCAACACACGACAAGGGACATTGAGCAGAAACAAACGACCA CGATAGTTTTGCTGGACACGTGCAGTTTTCTGCCAAACAAACTGCCATAG AAACTACGAGCTGTCGTCTTTCATCCCGCGAACTCGCACACGAGTATTTA GAAGCGACATTTCTTTTCGCGAGACAAGCCAGGGGATTCTTTATTCGTAA AAAAAGCAGCCGAGTTTCATCCCGGTTCGGGCTGGGGCGCGCATCCTGGC TTGTCGTGTTCTTTGCTTTCAGTCAAGGCACC
back to top

Coding sequence (CDS) from alignment at C-linearis_contig76:311327..314258-

>mRNA_C-linearis_contig76.15176.1 ID=mRNA_C-linearis_contig76.15176.1|Name=mRNA_C-linearis_contig76.15176.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2076bp|location=Sequence derived from alignment at C-linearis_contig76:311327..314258- (Chordaria linearis ClinC8C monoicous)
ATGTCGACCAGTAATGTCCTGCCGGTTCTTTTGGTGCTGCTCTCCTTCAT
CGCGCCAACCGCCCGTGGCTTCCTACCGCACGCTTCACCGAGAGCACTGC
TATATGACCACCGCGGGAACCTTAGCGTGCGCAGGGCAACCTCTGTCGTC
AGCATGTCCTCCGCGAAGACCAGCAGCGCTGCTGACAAGCTCCGCGATCT
ACTCAGCGGCCCAGAAATCCTCATCATGCCGTGCTGCTACGATGGATGTC
GACCAGTAATGTCCTGCCGGTTCTTTTGGTGCTGCTCTCCTTCATCGCGC
CAACCGCCCGTGGCTTCCTACCGCACGCTTCACCGAGAGCACTGCTATAT
GACCACCGCGGGAACCTTAGCGTGCGCAGGGCAACCTCTGTCGTCAGCAT
GTCCTCCGCGAAGACCAGCAGCGCTGCTGACAAGCTCCGCGATCTACTCA
GCGGCCCAGAAATCCTCATCATGCCGTGCTGCTACGATGGCCTCACGGCA
CGGCTGGTGGAACAAGCTGGGTTCCCGCTCACGTTCATGACAGGCTTCGG
GGTCTCTGGTGCGCACGGACTGCCCGACACCCAGCCTCACGGCACGGCTG
GTGGAACAAGCTGGGTTCCCGCTCACGTTCATGACAGGCTTCGGGGTCTC
TGGTGCGCACGGACTGCCCGACACCCAGCTCCTGTCGTACGCTGAGATGC
TTGCCTCGGCCACCAACATCTGCTCCACCTTGAACGACATCCCGTGCATC
GGGGACGGAGACACCGGGTACGGGAACGCCGTCAACGTCAAGCGAACGGT
CAAAGGCTACGCGCAGCTCCTGTCGTACGCTGAGATGCTTGCCTCGGCCA
CCAACATCTGCTCCACCTTGAACGACATCCCGTGCATCGGGGACGGAGAC
ACCGGGTACGGGAACGCCGTCAACGTCAAGCGAACGGTCAAAGGCTACGC
GCAGGTGGGCATGGCCGGCATCATGATAGAGGACCAGGTAGCCCCGAAGC
GCTGCGGCCACACGAAAGGCAAGACCGTTGTGGGGAGGGAAGAGGCCTAC
AGCCGCGTCAGGGCTGCGTGCGACGCCAGGTATGTGCAGACCGTGGGCAT
GGCCGGCATCATGATAGAGGACCAGGTAGCCCCGAAGCGCTGCGGCCACA
CGAAAGGCAAGACCGTTGTGGGGAGGGAAGAGGCCTACAGCCGCGTCAGG
GCTGCGTGCGACGCCAGGTATGTGCAGACCGGTGCAGACATCCTCGTCAT
GGCCCGCACAGATGCTCGGGCTGGTCTGGGGCTGGAGGAGGCGCTCGAGA
GGTGCAAAGAGTTCAGGAGAATCGGGGCGGACATTACCTTCCTGGAGGCC
CCGCAGAGCGAGGAGGAGATGCGGCGATACTGCCAGGAGGTGGACGGCCC
CAAGCTCGCCAACATGCTAGAGGGTGCAGACATCCTCGTCATGGCCCGCA
CAGATGCTCGGGCTGGTCTGGGGCTGGAGGAGGCGCTCGAGAGGTGCAAA
GAGTTCAGGAGAATCGGGGCGGACATTACCTTCCTGGAGGCCCCGCAGAG
CGAGGAGGAGATGCGGCGATACTGCCAGGAGGTGGACGGCCCCAAGCTCG
CCAACATGCTAGAGTTCGGCAAGACTCCCATCCTGCCCCCCGCCGAGCTT
CAGAAGATGGGCTACACCATCGCGGCGTATCCGCTCAGCTTGCTGAGCGC
GAGCATCAAGGCCATGAACTCGGCGCTGGAGAGGCTCAAGGCGGGGGAGC
CTCTGGACGACCTGTTGGAGGGCTTCGAGGAGGTCCAGAAAGTTGTTGGG
TTCAGGAACTACGATGCCACGGCGGAGAAGTATAAAATTGACTAGTTCGG
CAAGACTCCCATCCTGCCCCCCGCCGAGCTTCAGAAGATGGGCTACACCA
TCGCGGCGTATCCGCTCAGCTTGCTGAGCGCGAGCATCAAGGCCATGAAC
TCGGCGCTGGAGAGGCTCAAGGCGGGGGAGCCTCTGGACGACCTGTTGGA
GGGCTTCGAGGAGGTCCAGAAAGTTGTTGGGTTCAGGAACTACGATGCCA
CGGCGGAGAAGTATAAAATTGACTAG
back to top