mRNA_C-linearis_contig75.15066.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig75.15066.1 vs. uniprot
Match: A0A6H5KE27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE27_9PHAE) HSP 1 Score: 806 bits (2081), Expect = 8.670e-277 Identity = 528/1000 (52.80%), Postives = 587/1000 (58.70%), Query Frame = 1
Query: 85 PRIPWSWVCRSIIETVTRYPSGLTEAVIMAELELLWRRYVRGAFVPGKLQAYLDAQYAPLSDVVQACVVRHADQLVSDRSNNGPRTNSVTLVEDHSVGASRDLPPAKCVADMYLHQNFKSCLRYTQGAGHDLLAPGRKVRLTGCRLLTGATAALAGSGSGRAGGGEAGRRSAR----STLLLTEYLAFVLDHHRPEDLRLAASAFALGRTRVRDSLNENSNHEAFFVVCKVLEIRRPRQHSAPGGGQQCRKRRQTLRTVVLECAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETVLLHLWDEQTCLASLFRKGDGLAVYWPWLV-QQQPQGGGVVHDSTG--GRAASQQQSLSSQAPLPDSSSGWHFEYGSATALFVLPRESRAQLLAASNGIANSDGTGAGAEGA---------------CLTEATAGDGGGGVAPRGRLSSGGVLRAQEMPADENGVRDLLQFPCRLSVSDLLPNLSSVSVYGQVVSVVCVTGSSLPAVLPPSRATASGNQAPPMSSSFLSQQLPLKPVMLLQQH-QQRQPSST------------------KVVELWVRDSGGTARVFCCGRRAAADALRCRPGQYVLACGLRTFAPAFPPLDDSE-GPGGSVVVVCGETGETSPGEEEGAXXXXXXXXXXXXXXXXXXXXXXXXXXGGDCLGRILNTSCLEGLLHCPFLSRHSLLTNTQRAPGPRATFASKAAVTWARWTFDGDGLWAVHRRCGTQIPCHYATLCTSADTAAGRTSRKRPREMRDPGSVGGRAGGARQDASVTVTCPLCK----------------------------------------------RAVRVDRDDEAELAYAPLLLALDDGTRCLVAECRSEVVTAALGGTNPHVYLQMDQAERNATLASLVGREIRCVVGGNGAVA------------GGSSGVYGSGGENNDVNGRVEFRVERIASTNPAADLAHALS 2784
P++P ++IETV RYPSGLTEAVI+AELELLWRR VRGAFVPGKLQAYLDAQYAPLSDV+QACVVRH+DQLV TLVEDHS S +L PAK DMYLHQNFK CLRY QG GHDLLAPGRKVRLTGCRLLTGA A RRS STLLLTEYLAFVLDH R +DLRLA F G RV+++ E SN+E FFV+CK R +QH XXXXXXXXRETVL HLWDEQTCL SLFRKGDGL VYWPWLV +QQP+ G S G SQQQ +SSQ PLP +SSGWHFEYGSATALFVLPRESRAQL +A+N +N DG G G A+ G GR G V EMP DENGVRD+LQFP RL V+DL PNLS+ S+YGQVVSV V GSSLPA+LPPSR +S +SSS QLPLKPVML+QQ QQ Q + KVVEL +RD GTARV CCGR+AAADALRCRPGQYVL CGLRTFA AFPP DDSE GP G VVV+CGE + S E+ A GGD + +LNTS LEG LHCPFLSRHSLL + +R PGPRA+FA KAAVTWARWTFDGDGLWAVHRRCG ++PCH++ L SAD A RTSRKR R+MR+PG V GARQ V+V CPLC+ R+VRV DEAEL YAPLLLALDDGTRCLVAECRS VV+AA GG N H +LQMD+AER AT+ SLVGREIRCVVGG GA + G + D GRV RVERIAS NPAADLA+ +S
Sbjct: 6 PKVPKFRGHTTLIETVRRYPSGLTEAVILAELELLWRRDVRGAFVPGKLQAYLDAQYAPLSDVIQACVVRHSDQLV-------------TLVEDHSCSVSSNLSPAK--VDMYLHQNFKPCLRYAQGVGHDLLAPGRKVRLTGCRLLTGA-AXXXXXXXXXXXXXXXXRRSPNCGGPSTLLLTEYLAFVLDHRRSDDLRLAQGMF--GGQRVKNTFEEKSNYEEFFVICKG----RKQQHXXXXXXXXX------------------------------------------------------------XXXXXXXXRETVLFHLWDEQTCLTSLFRKGDGLGVYWPWLVREQQPRSSGGDQGSAAAPGGLPSQQQLVSSQLPLPRASSGWHFEYGSATALFVLPRESRAQLFSAANEDSNGDGFSTGGPGVESRSSXXXXXXXXXXXXVVASRKAFSRGAVVNGRGRGGTVGAVHEMPIDENGVRDVLQFPRRLFVTDLAPNLSNASIYGQVVSVASVPGSSLPAILPPSRGMSS------LSSSL--SQLPLKPVMLMQQELQQLQQQESGMGLVAGRGAXXXXXXXXKVVELLIRDDRGTARVLCCGRKAAADALRCRPGQYVLVCGLRTFAAAFPPSDDSEQGPDGHVVVLCGEAEDMS--REDAAATTGAEGRAAAGARAGEAGG------GGDSVSGVLNTSSLEGFLHCPFLSRHSLLHDRRRTPGPRASFACKAAVTWARWTFDGDGLWAVHRRCGARLPCHFSALGASADPAR-RTSRKRQRDMREPGCVRNGGTGARQ--GVSVMCPLCQAGVSASLSSSQFTFVHDTAAAVLTVALISFCHWACVVARARRLLRQRSVRVACADEAELGYAPLLLALDDGTRCLVAECRSAVVSAAFGGMNAHDFLQMDEAERKATVDSLVGREIRCVVGGGGAASEVXXXXXXXXXXXXXEGDW-------DGAGRVGLRVERIASVNPAADLAYLVS 897
BLAST of mRNA_C-linearis_contig75.15066.1 vs. uniprot
Match: D7FQ83_ECTSI (CDC24_OB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ83_ECTSI) HSP 1 Score: 627 bits (1618), Expect = 7.960e-209 Identity = 453/978 (46.32%), Postives = 508/978 (51.94%), Query Frame = 1
Query: 1 MDWVQLHCDRLRSKLQDVVDGGANINAAP---RIPWSWVCRSIIETVTRYPSGLTEAVIMAELELLWRRYVRGAFVPGKLQAYLDAQYAPLSDVVQACVVRHADQLVSDRSNNGPRTNSVTLVEDHSVGASRDLPPAKCVADMYLHQNFKSCLRYTQGAGHDLLAPGRKVRLTGCRLLTGATAALAGSGSGRAGGGEAGRRSAR---STLLLTEYLAFVLDHHRPEDLRLAASAFALGRTRVRDSLNENSNHEAFFVVCKVLEIRRPRQHSAPGGGQQCRKRRQTLRTVVLECAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETVLLHLWDEQTCLASLFRKGDGLAVYWPWLV-QQQPQGGGVVHDSTG--GRAASQQQSLSSQAPLPDSSSGWHFEYGSATALFVLPRESRAQLLAASNGIANSDGTGAGAEGA------------------CLTEATAGDGGGGVAPRGRLSSGGVLRAQEMPADENGVRDLLQFPCRLSVSDLLPNLSSVSVYGQVVSVVCVTGSSLPAVLPPSRATASGNQAPPMSSSFLSQQLPLKPVMLLQQHQQRQPSST-----------------KVVELWVRDSGGTARVFCCGRRAAADALRCRPGQYVLACGLRTFAPAFPPLDDSE-GPGGSVVVVCGETGETSPGEEEGAXXXXXXXXXXXXXXXXXXXXXXXXXXGGDCLGRILNTSCLEGLLHCPFLSRHSLLTNTQRAPGPRATFASKAAVTWARWTFDGDGLWAVHRRCGTQIPCHYATLCTSADTAAGRTSRKRPREMRDPGSVGGRAGGARQDASVTVTCPLCKRAVRVDRDDEAELAYAPLLLALDDGTRCLVAECRSEVVTAALGGTNPHVYLQMDQAERNATLASLVGREIRCVVGGNGAVA-----GGSSGVYGSGGENNDVNGRVEFRVERIASTNPAADLAHALS 2784
MDWVQ HCDRLRSKLQ VVD GA+ A R+PWSW CR++IETV RYPSGLTEAVI+AELELL G + + E + R P C ++ A L CRLLTGA STLLLTEYLAFVLDH R +DLRLA F G RV+D+ E SN+E FFVVCK GDGL VYWPWLV +QQP+ G S G +SQQQ +SSQ PLP S GWHFEYGSATALFVLPRESRAQL +A+N +N DG G G + A G GV RGR G V A EMPADENGVRDLLQFP RL V+DL PN+S+ S+YGQVVSV V GSSLPA+LPPSR +S SSS LSQ LPLKPVML VVEL +RD GTARV CCGR+AAADALRCRPGQYVL CGLRTFA AFPPLDDSE GP G VVV+CGE E S E+ A XXXXXXXXXXXX D + +LNTS LEG LHCPFLSRHS L + +R PGPRA+ A KAAVTWARWTFDGDGLWAVHRRCG ++PCH++ L SAD A R SRKRPR+MR+PG V GA+Q V+V CPLC+ +VRV DEAEL YAPLLLALDDGTRCLVAECRS VVTAA GG N H +LQM +AER AT+ SLVGREIRCVVGG+GA + RV RVERIAS NPAADLA+ ++
Sbjct: 1 MDWVQEHCDRLRSKLQGVVDSGASSGAGELGLRVPWSWTCRTLIETVRRYPSGLTEAVILAELELL--------------------------------------------CEGGGTFEAPSCPESFRPISMRSTP---------------RCPTSSRRASFATLT-------NWCRLLTGAXXXXXXXXXXXXXXXXXXXXXXXXXXSTLLLTEYLAFVLDHRRSDDLRLAQGMF--GGLRVKDTFEEKSNYEEFFVVCK------------------------------------------------------------------------------------------------------------GDGLGVYWPWLVREQQPRSSGGDQGSAAAPGGLSSQQQLVSSQLPLPSDSFGWHFEYGSATALFVLPRESRAQLFSAANNDSNGDGFSTGGPGVESRSSXXXXXXXXXXXXXVVVSRKATSRGAGVDGRGR--GGTVGAAHEMPADENGVRDLLQFPRRLFVTDLAPNMSNASIYGQVVSVASVPGSSLPAILPPSRGMSS-------SSSSLSQ-LPLKPVMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVVELLIRDDRGTARVLCCGRKAAADALRCRPGQYVLVCGLRTFAAAFPPLDDSEQGPDGHVVVLCGEAEEMS--REDAAATTDAEGRAAXXXXXXXXXXXX------DSVSGVLNTSSLEGFLHCPFLSRHSFLHDRRRTPGPRASLACKAAVTWARWTFDGDGLWAVHRRCGARLPCHFSALGASADPAR-RISRKRPRDMREPGCVRSGRTGAQQ--GVSVICPLCQSSVRVACADEAELGYAPLLLALDDGTRCLVAECRSAVVTAAFGGMNAHDFLQMGEAERKATVDSLVGREIRCVVGGDGAASEVXXXXXXXXXXXXXXXXXXXXXRVGLRVERIASVNPAADLAYLVA 781
BLAST of mRNA_C-linearis_contig75.15066.1 vs. uniprot
Match: A0A225W2H0_9STRA (Protein involved in DNA replication n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W2H0_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.610e-11 Identity = 108/444 (24.32%), Postives = 171/444 (38.51%), Query Frame = 1
Query: 1 MDWVQLHCDRLRSKLQDVVDGGANINA-APRIPWSWVCRSIIETVTRYPSGLTEAVIMAELELLWRRYVRG-----AFVPGKLQAYLDAQYAPLSDVVQACVVRHADQLVSDRSNNGPRTNSVTLVEDHSVGASRDLPPAKCVADMYLHQNFKSCLRYT------QGAGHDLLA--PGRKVRLTGCRLLTGATAALAGSGSGRAGGGEAGRRSARSTLLLTEYLAFVLDHHRPEDLRLAASAFALGRT-RVRDSLNENSNHEAFFVVCKVLEIRRPRQHSAPGGGQQCRKRRQTLRTVVLECAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETVLLHL---WDEQTCLASLFRKGDGLAVYWPWLVQQQPQGGGVVHDSTGGRAASQQQSLSSQAPLPDSSSGWHFEYGSATALFVLP 1278
+D+V+ ++ KL++V +A PRIP+ WV ++ + YP+GLTEAV++ E+ L ++ G A P K + DA+ + D + DQ + G N +T+ +++ VA MYLHQ F+SC+ + Q D R++ T +LL A + GE R + TLL T +L LD RP D +L A + +L + ++ N+ + + + KVL+I G + C+ R V+L R T LHL WD+Q L+ LFR GD L+++ P++ + ++H SSQ L ++FEYGSAT LF P
Sbjct: 28 LDFVERQVSFVQQKLREVWQRKRGKDADVPRIPFYWVFSKLLRLIEEYPAGLTEAVVVTEVAKLLKQKEAGDIEKEAGGPRKKRKIRDAE--DMGDFLA-----EGDQEALQATITGYSNNRLTIEMENATDV---------VAHMYLHQRFRSCVDFLHHQLQHQATSGDTFPFQTAREITFTNAKLLERKEVDTAQTN------GENNR--IKFTLLPTAFLTARLDEARPLDRKLLADSVSLSQVDQLVAGANDPTAIQQLILKAKVLDI---------GAIRPCQTPLYVRRQVIL------------------------------------LGEVDQTSSRVSAGATPNTQRMTQGLHLMVLWDDQVALSRLFRVGDTLSIFHPFVHVRGQHDAEILHILN---------EYSSQQRLM-----YYFEYGSATVLFCKP 388
BLAST of mRNA_C-linearis_contig75.15066.1 vs. uniprot
Match: A0A6A3IWZ0_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IWZ0_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 2.200e-9 Identity = 98/435 (22.53%), Postives = 156/435 (35.86%), Query Frame = 1
Query: 4 DWVQLHCDRLRSKLQDVV----DGGANINAAPRIPWSWVCRSIIETVTRYPSGLTEAVIMAELELLWRRYVRGAFVPGKLQAYLDAQYAPLSDVVQACVVRHADQLVSDRSNNGPRTNSVTLVEDHSVGASRDLPPAKCVADMYLHQNFKSCLRY--------TQGAGHDLLAPGRKVRLTGCRLLTGATAALAGSGSGRAGGGEAGRRSARSTLLLTEYLAFVLDHHRPEDLRLAASAFALGRT-RVRDSLNENSNHEAFFVVCKVLEIRRPRQHSAPGGGQQCRKRRQTLRTVVLECAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETVLLHLWDEQTCLASLFRKGDGLAVYWPWLVQQQPQGGGVVHDSTGGRAASQQQSLSSQAPLPDSSSGWHFEYGSATALF 1269
D+V+ ++ KL+D+ GA+I P +P+ WV ++ + YP GLTEAV++ EL + ++ G G + D+ + + L + + G ++ + V A MYLHQ F++C+ Y + GR+V T +LL G + A+ TLL T +L LD RP D RL A + L R ++ + + + + KVL+I G + C+ R V+L + L+ LWD+Q L+ LFR GD L+++ P++ P G + H SSQ L ++FEYGSAT LF
Sbjct: 19 DFVERQVLFVQQKLRDLWCRKRGSGADI---PSVPFYWVFSKLLRLIEEYPDGLTEAVVVTELAKILKQKEAGDAEQGVGNQRKKRKIRDAEDMGELLAEGEQEALQAKVTGYGNHRLTIEMENAKDV-----------TAHMYLHQRFRTCVDYLHRHLQYESSSVATFPFQTGREVAFTNAKLLERKEIDTVGDSN-----------RAKFTLLPTGFLTARLDEQRPLDRRLLADSINLSRVDQLVGGAQDPAVIQQLMLKAKVLDI---------GAIRPCQTPLYVHRQVIL--------------------------------LGEVDQTDVRIPAGATANTQRTLMQGLHLMVLWDDQVALSRLFRVGDTLSIFHPFVHVCAPHDGEIQHILN---------EYSSQQRLV-----YYFEYGSATVLF 373
BLAST of mRNA_C-linearis_contig75.15066.1 vs. uniprot
Match: W2Q1V7_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2Q1V7_PHYPN) HSP 1 Score: 69.7 bits (169), Expect = 2.540e-8 Identity = 100/440 (22.73%), Postives = 159/440 (36.14%), Query Frame = 1
Query: 4 DWVQLHCDRLRSKLQDVVDGGANINAA-PRIPWSWVCRSIIETVTRYPSGLTEAVIMAELELLWRRYVRG-----AFVPGKLQAYLDAQYAPLSDVVQACVVRHADQLVSDRSNNGPRTNSVTLVEDHSVGASRDLPPAKCVADMYLHQNFKSCLRYTQG--------AGHDLLAPGRKVRLTGCRLLTGATAALAGSGSGRAGGGEAGRRSARSTLLLTEYLAFVLDHHRPEDLRLAASAFALGRT-RVRDSLNENSNHEAFFVVCKVLEIRRPRQHSAPGGGQQCRKRRQTLRTVVLECAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETVLLHLWDEQTCLASLFRKGDGLAVYWPWLVQQQPQGGGVVHDSTGGRAASQQQSLSSQAPLPDSSSGWHFEYGSATALFVLP 1278
D+V+ ++ KL+ + I A PRIP+ WV ++ + YP GLTEAV++ EL L ++ G P K + D D ++ +Q G + +T+ +++ +D+ A MYLHQ F+SC+ + R++ T +LL R G A + TLL T +L LD RP D +L A + +L + ++ + + + V KVL+I G + C+ R V+L + L+ LWD+Q L+ LFR GD L+++ P++ +VH SSQ L ++FEYGSAT LF P
Sbjct: 24 DFVERQVLFVQQKLRALWQRKRGIGAEIPRIPFYWVFSKLLRLIEEYPDGLTEAVVVTELAKLLKQSEAGNTEQEVGAPRKKRKIRD-------DEDMGDLLAEGEQEALQAKVAGYGNHRLTIEMENA----KDI-----TAHMYLHQRFRSCVDFLHSNMQYEPSSIATFPFQSAREIAFTNAKLLE------------RKEVGMANNDRVKFTLLPTSFLTTRLDESRPLDRKLLADSISLNQVDQLVGGAQDPAAIQQLMVKAKVLDI---------GAIRPCQTPLYVHRQVIL---------------------------------LGEIDQINSRVPVGATPNTQKLTQGLHLMVLWDDQVALSRLFRVGDTLSIFHPFVHVCDQHDAEIVHILN---------EYSSQQRLV-----YYFEYGSATVLFCKP 379
BLAST of mRNA_C-linearis_contig75.15066.1 vs. uniprot
Match: A0A329SH38_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SH38_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 4.440e-8 Identity = 109/443 (24.60%), Postives = 167/443 (37.70%), Query Frame = 1
Query: 1 MDWVQLHCDRLRSKLQDVVDGGANINAA-PRIPWSWVCRSIIETVTRYPSGLTEAVIMAELELLWRRYVRGAFVPGKLQAYLDAQYAPLSDVVQACVVRHADQLVSDRSNNGPRTN---SVTLVEDHSVGASRDLPPAKCV-ADMYLHQNFKSC-------LRYTQGAGHDL-LAPGRKVRLTGCRLLTGATAALAGSGSGRAGGGEAGRRSARSTLLLTEYLAFVLDHHRPEDLRLAASAFALGRT-RVRDSLNENSNHEAFFVVCKVLEIRRPRQHSAPGGGQQCRKRRQTLRTVVLECAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETVLLHL---WDEQTCLASLFRKGDGLAVYWPWLVQQQPQGGGVVHDSTGGRAASQQQSLSSQAPLPDSSSGWHFEYGSATALFVLP 1278
+D+V+ + KL+++ I A PRIP+ WV ++ V YP GLTEAV++ EL P K + +A+ + + + +R + + D G + VT +H + ++ AK V A MYLHQ F+SC L+Y + P R++ T +LL +A + A R R TLL T +L LD RP D RL A L + ++ +++ + + KVL+I G + C+ R V+L R T LHL WD+Q L+ LFR GD L+++ P++ ++H SSQ L ++FEYGSAT LF P
Sbjct: 28 LDFVERQVLFAQQKLRELWLRKRGIGAEIPRIPFYWVFSKLLRLVEEYPDGLTEAVVVTELAK-----------PLKQKEAGNAEQEVGTPMKKKRKIRDEEDM-GDLLAEGEQEALQAKVTGYGNHRLAI--EMENAKDVMAHMYLHQRFRSCVDFLHSNLQYNPSSVAMFPFQPAREIAFTNAKLLERKEVGIATT---------AERDRVRFTLLPTAFLTARLDEARPLDRRLLADCINLSQVDQLVGGAQDSTVIQQLMLKAKVLDI---------GAIRPCQTPLYVHRQVIL--------------------------------------LGEVDQTRVPAGATPNTQRMTQGLHLIVLWDDQVALSRLFRVGDTLSIFHPFVHVCGQHDAEILHILN---------EYSSQKRLV-----YYFEYGSATVLFCKP 386
BLAST of mRNA_C-linearis_contig75.15066.1 vs. uniprot
Match: G4Z2Q8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z2Q8_PHYSP) HSP 1 Score: 68.2 bits (165), Expect = 5.330e-8 Identity = 109/440 (24.77%), Postives = 168/440 (38.18%), Query Frame = 1
Query: 4 DWVQLHCDRLRSKLQDVV-----DGGANINAAPRIPWSWVCRSIIETVTRYPSGLTEAVIMAELELLWRRYVRGAFVPGKLQAYLDAQYAPLSDVVQACVVRHAD---QLVSDRSNNGPRTNSVTLVEDHSVGASRDLPPAKCV-ADMYLHQNFKSCLRYTQG--AGHDLLAP---GRKVRLTGCRLLTGATAALAGSGSGRAGGGEAGRRSARSTLLLTEYLAFVLDHHRPEDLRLAASAFALGRT-RVRDSLNENSNHEAFFVVCKVLEIRRPRQHSAPGGGQQCRKRRQTLRTVVLECAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETVLLHLWDEQTCLASLFRKGDGLAVYWPWLVQQQPQGGGVVHDSTGGRAASQQQSLSSQAPLPDSSSGWHFEYGSATALFVLP 1278
D+V+ ++ KL+D+ GGA+I P +P+ WV ++ + YP GLTEAV++ EL L ++ G DA+ + + + +R + +L+++ + VT +H + D AK V A MYLHQ F++C+ Y P GR+V T +LL AG GS RA R TLL T +L LD +P D RL A + L R ++ + + + + KVL+I G + C+ R V+L + L+ LWD+Q L+ LFR GD L+++ P++ + H SSQ L ++FEYG AT LF P
Sbjct: 29 DFVERQVLFVQQKLRDLWRRKRGGGGADI---PSVPFYWVFSKLLRLIEEYPDGLTEAVVVTELAKLLKQKEAG-----------DAEQG-VGNQSKKRKIRDEEGMGELLAEGEQEALQAK-VTGYGNHRLSIEMD--NAKDVTAHMYLHQRFRTCVDYLHRHLQYESTTFPFQNGREVVFTNAKLLERKEIDTAG-GSSRA----------RFTLLPTGFLTARLDEQQPLDRRLLADSINLSRVDQLVGGARDPAVIQQLMLKAKVLDI---------GAIRPCQTPLYVHRQVIL--------------------------------LGEIDQTNFRTPAGATPNTQRTVMQGLHLMVLWDDQVVLSRLFRVGDTLSIFHPFVHVCDQHDAEIQHILN---------EYSSQQRL-----WYYFEYGCATVLFCKP 384
BLAST of mRNA_C-linearis_contig75.15066.1 vs. uniprot
Match: D0NAT4_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NAT4_PHYIT) HSP 1 Score: 65.9 bits (159), Expect = 2.750e-7 Identity = 101/438 (23.06%), Postives = 160/438 (36.53%), Query Frame = 1
Query: 31 LRSKLQDVVDGGANINA-APRIPWSWVCRSIIETVTRYPSGLTEAVIMAELELLWRRYVRGAF-----VPGKLQAYLDAQYAPLSDVVQACVVRHADQLVSDRSNNGPRTNSVTLVEDHSVGASRDLPPAKCVADMYLHQNFKSCLRYTQGA-----GHDLLAP---GRKVRLTGCRLL----TGATAALAGSGSGRAGGGEAGRRSARSTLLLTEYLAFVLDHHRPEDLRLAASAFALGRT-RVRDSLNENSNHEAFFVVCKVLEIRRPRQHSAPGGGQQCRKRRQTLRTVVLECAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETVLLHL---WDEQTCLASLFRKGDGLAVYWPWLVQQQPQGGGVVHDSTGGRAASQQQSLSSQAPLPDSSSGWHFEYGSATALFVLP 1278
++ KL+++ +I A AP +P+ WV ++ + YP GLTEAV++ +L L + +G P K + D D ++ +Q G + +T+ +++ + A MYLHQ F+SC+ + Q + P RK+ T +LL G T A A + TLL T +L LD RP D RL + + +L + ++ + + + + KVL+I G + C+ R V+L R T LHL W +Q L+ LFR GD LAV+ P++ ++H +SQQ+ L + FEYGSAT LF P
Sbjct: 20 VQQKLRELWQRKRSIGAEAPGVPYYWVFSKLLRLIEEYPDGLTEAVVVTDLAKLLKYKEKGTTEQKVGAPNKRRKIRD-------DEDMGDLLAEGEQEALQAKITGYGNHRLTIEMANAMDVT---------AHMYLHQRFRSCVDFLQSTLKYEPSSVAMFPFQTARKIAFTNAKLLERKQVGTTMAAASD-------------RVQFTLLPTAFLTARLDGARPLDRRLLSESISLSQVDQLVGGAQDPTAVQQLLLKAKVLDI---------GAIRPCQTPLYVHRQVIL------------------------------------LGEVDQSITRPPPGATPNTQRMTQGLHLMVLWADQVALSRLFRVGDTLAVFHPFVHVCDQHDTEILHILN--EYSSQQRLL------------YFFEYGSATVLFCKP 369
BLAST of mRNA_C-linearis_contig75.15066.1 vs. uniprot
Match: A0A833RXV6_PHYIN (Cell division control protein 24 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833RXV6_PHYIN) HSP 1 Score: 65.9 bits (159), Expect = 3.910e-7 Identity = 99/444 (22.30%), Postives = 163/444 (36.71%), Query Frame = 1
Query: 4 DWVQLHCDRLRSKLQDVVDGGANINA-APRIPWSWVCRSIIETVTRYPSGLTEAVIMAELELLWRRYVRGAF-----VPGKLQAYLDAQYAPLSDVVQACVVRHADQLVSDRSNNGPRTNSVTLVEDHSVGASRDLPPAKCVADMYLHQNFKSCLRYTQGA-----GHDLLAP---GRKVRLTGCRLL----TGATAALAGSGSGRAGGGEAGRRSARSTLLLTEYLAFVLDHHRPEDLRLAASAFALGRT-RVRDSLNENSNHEAFFVVCKVLEIRRPRQHSAPGGGQQCRKRRQTLRTVVLECAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETVLLHLWDEQTCLASLFRKGDGLAVYWPWLVQQQPQGGGVVHDSTGGRAASQQQSLSSQAPLPDSSSGWHFEYGSATALFVLP 1278
D+V+ ++ L+++ +I+A AP +P+ WV ++ + YP GLTEAV++ +L L + +G P K + D D ++ +Q G + +T+ +++ + A MYLHQ F+SC+ + Q + P R++ T +LL G T A A + TLL T +L LD RP D RL + + L + ++ + + + + KVL+I G + C+ R V+L + L+ LWD+Q L+ LFR GD LAV+ P++ ++H +SQQ+ L + FEYGSAT LF P
Sbjct: 27 DFVERQILFVQQNLRELWQRKRSIDAEAPGVPYYWVFSKLLRLIEEYPDGLTEAVVVTDLAKLLKYKEKGTTEQKVGAPNKRRKIRD-------DEDMGDLLAEGEQEALQAKITGYGNHRLTIEMANAMDVT---------AHMYLHQRFRSCVDFLQSTLKYEPSSVAMFPFQTAREIAFTNAKLLERKQVGTTMAAASD-------------RVQFTLLPTAFLTARLDGARPLDRRLLSESIILSQVDQLVGGAQDPTAVQQLLLKAKVLDI---------GAIRPCQTPLYVHRQVIL---------------------------------LGEVDQSITRLPPGATPNTQRMIQGLHLMVLWDDQVALSRLFRVGDTLAVFHPFVHVCDQHDTEILHILN--EYSSQQRLL------------YFFEYGSATVLFCKP 385
BLAST of mRNA_C-linearis_contig75.15066.1 vs. uniprot
Match: A0A2P4X874_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X874_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 8.960e-7 Identity = 103/446 (23.09%), Postives = 169/446 (37.89%), Query Frame = 1
Query: 4 DWVQLHCDRLRSKLQDVVD----GGANINAAPRIPWSWVCRSIIETVTRYPSGLTEAVIMAELELLWRRYVRG-----AFVPGKLQAYLDAQYAPLSDVVQACVVRHADQLVSDRSNNGPRTNSVTLVEDHSVGASRDLPPAKCVADMYLHQNFKSCLRYTQG-----AGHDLLAP---GRKVRLTGCRLLTGATAALAGSGSGRAGGGEAGRRSARSTLLLTEYLAFVLDHHRPEDLRLAASAFALGRT-RVRDSLNENSNHEAFFVVCKVLEIRRPRQHSAPGGGQQCRKRRQTLRTVVLECAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETVLLHL---WDEQTCLASLFRKGDGLAVYWPWLVQQQPQGGGVVHDSTGGRAASQQQSLSSQAPLPDSSSGWHFEYGSATALFVLP 1278
D+V+ ++ KL+++ GA+I P IP+ WV ++ + YP GLTEA+++ EL L ++ G P K + D + + D++ +Q G R + +T+ +++ +D+ + MYLHQ F+SC+ + A P R+V T +LL + G G + + + TLL T +L LD RP D RL A + +L + ++ + + + + KVL+I G + C+ R V+L R T LHL WD+Q L+ LFR GD L+++ P++ ++H SSQ L ++FEYGSAT LF P
Sbjct: 29 DFVERQVSYVQQKLRELWQRKRRNGADI---PCIPFYWVFSKLLRLIEEYPDGLTEALVVTELAKLLKQKEAGDAGHEVGAPRKKRKIRDEE--DMGDLLA-----EGEQEALQAKITGYRNHRLTVEMENA----KDV-----IVHMYLHQRFRSCVDFLHNQLKYEAASVATFPFQTAREVVFTNAKLLERKAMDM-----GPVNGED---KRFQFTLLPTAFLTARLDEARPLDRRLLADSVSLSQVDQLVSGEQDPAAIQQVMLKAKVLDI---------GAIRPCQTPLYLRRQVIL------------------------------------LGEVDQASTRIPAGATPNTQRMTQGLHLMVLWDDQVALSRLFRVGDTLSIFHPFVHVCDQHDSEILHILN---------EYSSQQRL-----AYYFEYGSATVLFCKP 388 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig75.15066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig75.15066.1 >prot_C-linearis_contig75.15066.1 ID=prot_C-linearis_contig75.15066.1|Name=mRNA_C-linearis_contig75.15066.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=931bp MDWVQLHCDRLRSKLQDVVDGGANINAAPRIPWSWVCRSIIETVTRYPSGback to top mRNA from alignment at C-linearis_contig75:17361..27210+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig75.15066.1 ID=mRNA_C-linearis_contig75.15066.1|Name=mRNA_C-linearis_contig75.15066.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9850bp|location=Sequence derived from alignment at C-linearis_contig75:17361..27210+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig75:17361..27210+ >mRNA_C-linearis_contig75.15066.1 ID=mRNA_C-linearis_contig75.15066.1|Name=mRNA_C-linearis_contig75.15066.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5586bp|location=Sequence derived from alignment at C-linearis_contig75:17361..27210+ (Chordaria linearis ClinC8C monoicous)back to top |