mRNA_C-linearis_contig74.15050.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig74.15050.1 vs. uniprot
Match: D8LD28_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD28_ECTSI) HSP 1 Score: 609 bits (1570), Expect = 1.180e-205 Identity = 405/587 (68.99%), Postives = 443/587 (75.47%), Query Frame = 3
Query: 534 MGHQVQQGAAREVLFGNGTGTVWETVRHAMTKQRRIPLF---NISTNLSNQCGHMSFLILALAYLETDVLALRGYAASGIGLSILFQFYRPQPLWIPIGWNGLFLLINTSMIGLLLRERSEAANIGDDPEQAKTFEEVFKRVELSPVDFVRLMDVAERRMVPKGTCLSQEGRVQEEVFLIVEGAAQVEAEGGAVGHLEQKQFVGSMAFNRFIQASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDNNSSTHKGSGEIMGVPASLGGHERDEVSKDFMGGVEEGDXXXXXXXXXXXXXXXXXXXGVFEEAKEVALNVLRRESIVGNIAMAQSFVLDAEGHRRHGVGEMERSGTTVTATTEMVVYAWDMHLLRAFIKRRSLAGAAFMKAISADLIRKVDQSRGAEERYRLLLAEALDGGVITPIEKKKLHRYRDMHGISTKEHKELLKEYEWREEEFEAGFQKGVAPRDGSEHFLAYEALVRRELAKGEVRDKGRQKLRKFRAKAGIDAQEHLLALEKQASMTAQGSGPTAGWTADDYELGGKGKAA----GLQVAE 2273
MG +VQQGAAR G G V + +R AM K+RR F +T SNQCGH+SF+ILALAYLETDVLALR AASGIGLSILFQFYR QPLWIPIGWNG+FLLIN SMIGLLL+E+SEAA+IGDDPEQA+TF+EVF VEL+PVDFVRLMD+AERR+V KGT LS+EG+ QEEVFLIVEGAA+VEAE AVGHLEQKQFVGSMAFNRF+QAS S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DN VP GG GVF+EAKEVALNVLRR+SIVG+ MAQSFV DAEG RRHG G+MERS TTVTATT++V Y WDMHLLRAFIKRR LAGAA AISADL RKVDQSRG EERYRLLLAEALDGGVITPIEKKKL RYRDMHGIS++EH+ELLKE+EW +EEFEAGFQKGV PRDGS+HFL YEAL+RRELAKG+V D GRQ LR+FR +AGIDAQEHL+ALEKQ GWTADDYE+G KGKAA G VAE
Sbjct: 1 MGPEVQQGAARL-----GEGGVLKQLRDAMVKERRPLQFMGCQTTTTASNQCGHLSFVILALAYLETDVLALRASAASGIGLSILFQFYRAQPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERRLVAKGTHLSEEGQPQEEVFLIVEGAAEVEAESAAVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVPTDISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DN-------------VPG---------------GG------------------------GVFKEAKEVALNVLRRDSIVGS--MAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLTRYRDMHGISSEEHRELLKEHEWTKEEFEAGFQKGVTPRDGSKHFLNYEALLRRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQ------------GWTADDYEVGAKGKAAACLAGRSVAE 515
BLAST of mRNA_C-linearis_contig74.15050.1 vs. uniprot
Match: A0A6H5KTM1_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTM1_9PHAE) HSP 1 Score: 389 bits (1000), Expect = 1.250e-119 Identity = 251/605 (41.49%), Postives = 335/605 (55.37%), Query Frame = 3
Query: 459 FSMAKPPGGAVGSVPW-KEAPFSALAMGHQVQQGAAREVLFGNGTGTVWETVRHAMTKQRRIPLF---NISTNLSNQCGHMSFLILALAYLETDVLALRGYAASGIGLSILFQFYRPQPLWIPIGWNGLFLLINTSMIGLLLRERSEAANIGDDPEQAKTFEEVFKRVELSPVDFVRLMDVAERRMVPKGTCLSQEGRVQEEVFLIVEGAAQVEAEGGAVGHLEQKQFVGSMAFNRFIQASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDNNSSTHK-GSGEIMGVPASLG-GHERDEVSKDFMGGVEEGDXXXXXXXXXXXXXXXXXXXGVFEEAKEVALNVLRRESIVGNIAMAQSFVLDAEGHRRHGVGEMERSGTTVTATTEMVVYAWDMHLLRAFIKRRSLAGAAFMKAISADLIRKVDQSRGAEERYRLLLAEALDGGVITPIEKKKLHRYRDMHGISTKEHKELLKEYEWREEEFEAGFQKGVAPRDGSEHFLAYEALVRRELAKGEVRDKGRQKLRKFRAKAGIDAQEHLLALEKQASMTAQGSGPTAGWTADDYELGGKGKAA 2255
S KPP A G + K+AP ++ A+G Q QQ +G+ E+ R MTK+RR F + +T + + CGH+S IL+L YLETD L+LR +G GL++ F +YR PLWI I WN FL IN ++IG + +E+ +A G DPEQA+ ++++F V+L+PV+F++LM A+RR+V +G ++Q+GR EE+FLIVEG A V +EG V LE FVGSMAFN FIQ SP +S H G +PA G G +D+ F+ G+ D GV + K V ++LR +S+VGN+A+ S V D R +GEME + TVTAT+++VVY WD H LRAF+KRR L GA KAIS D KV+QSRG + +YR+LL E L+GG I EK+KL RYR+ HGI+ +EH +L E W EEEF+ GFQ GVAPR GS+HF+ YEALV+RELAKGEV+ + + L FR AGIDAQEH+LAL KQ GWT DDYE+G KG ++
Sbjct: 57 LSTGKPPKLAGGRLLLPKQAPCASSAVGQQ-QQAEVEIEKYGDVLLLAQESFRKEMTKERRPLQFVGIDTATTIGSVCGHISLGILSLGYLETDALSLRELVVAGSGLNLFFSYYRTPPLWISIKWNLFFLAINAALIGAMWKEKDDAEEFGKDPEQARIYQDIFMPVDLNPVEFMQLMGQAQRRVVLEGNDINQQGRPHEEMFLIVEGTADVRSEGEDVCRLEPGGFVGSMAFNAFIQESPL--------------------------------------------------------------ASYHTVARGAADALPAGGGAGDGKDQADSVFIEGLVVRDGGYKYGGK-----------GVLDLVKGVIFHMLRGDSVVGNVAL--SLVPDVVD-RSKDLGEMECAKNTVTATSDVVVYVWDQHALRAFLKRRPLIGAGLQKAISEDFSNKVNQSRGHKTKYRMLLEETLEGGKINQTEKRKLQRYRETHGIALEEHNFILAERGWTEEEFDVGFQPGVAPRQGSQHFVKYEALVQRELAKGEVKPESKLFLLNFRRHAGIDAQEHILALGKQ------------GWTVDDYEVGVKGMSS 572
BLAST of mRNA_C-linearis_contig74.15050.1 vs. uniprot
Match: D8LD36_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD36_ECTSI) HSP 1 Score: 373 bits (958), Expect = 6.680e-113 Identity = 247/548 (45.07%), Postives = 308/548 (56.20%), Query Frame = 3
Query: 621 MTKQRR-IPLFNIST--NLSNQCGHMSFLILALAYLETDVLALRGYAASGIGLSILFQFYRP--QPLWIPIGWNGLFLLINTSMIGLLLRERSEAANIGDDPEQAKTFEEVFKRVELSPVDFVRLMDVAERRMVPKGTCLSQEGRVQEEVFLIVEGAAQVEAEGGAVGHLEQKQFVGSMAFNRFIQASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDNNSSTHKGSGEIMGVPASLGGHERDEVSKDFMGGVEEGDXXXXXXXXXXXXXXXXXXXGVFEEAKEVALNVLRRE-SIVGNIAMAQSFVLDAEGHRRHGVGEMERSGTTVTATTEMVVYAWDMHLLRAFIKRRSLAGAAFMKAISADLIRKVDQSRGAEERYRLLLAEALDGGVITPIEKKKLHRYRDMHGISTKEHKELLKEYEWREEEFEAGFQKGVAPRDGS-EHFLAYEALVRRELAKGEVRDKGRQKLRKFRAKAGIDAQEHLLALEKQASMTAQGSGPTAGWTADDYELGGK 2243
M K RR + IST N + CGH+SF IL AYLETDVL LR SG L+I+F +R P+WIPI WN FL +N +M+ LL+ ER EA +G DPEQA+ F E+F +LSPV F+RLMDVAERR++ KG L+QEGR EEVFLIVEG A+V++EG V HL FVGSMAFNRFI+ +PS +ST K A GG EG G+F +A EV L LR++ SIVG + Q+FV D R+ G MERS T+TAT+++V Y WDMH+LR F+KRR + GA+ KAIS DL KV+QSR +E YR LLAEALDGG +T E++ L RYR H IS EH+E LKE+ W EE+FEAGFQ+ AP+D S E+FL YEAL++ EL GEV+ + R LRKFR++AGIDAQEHLLA+EKQ GWTAD+YE+GG+
Sbjct: 92 MIKDRRPLEFLGISTVTNAGSLCGHLSFAILTAAYLETDVLTLRVLVLSGSTLNIMFNMFRVVGPPVWIPIKWNVGFLALNAAMVWLLMNEREEAEELGKDPEQARIFREIFMPTQLSPVHFLRLMDVAERRVMLKGNDLNQEGRPHEEVFLIVEGTAEVKSEGVVVCHLASGGFVGSMAFNRFIK-TPSP-------------------------------------------------------------TSTKK---------AGEGGSS-----------YREG--------------------GIFTQAWEVFLYQLRKQGSIVGEVG--QTFVGDNTSRRQDKSG-MERSSNTITATSDVVAYVWDMHVLREFVKRRPMIGASLQKAISVDLANKVNQSRDHKEHYRQLLAEALDGGRVTSTERRNLQRYRGGHRISVAEHRERLKEHGWTEEDFEAGFQELAAPKDMSKENFLKYEALLKSELDTGEVKPEARSNLRKFRSQAGIDAQEHLLAIEKQ------------GWTADEYEIGGR 522
BLAST of mRNA_C-linearis_contig74.15050.1 vs. uniprot
Match: D8LD37_ECTSI (Cyclic nucleotide-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD37_ECTSI) HSP 1 Score: 355 bits (912), Expect = 1.230e-108 Identity = 243/607 (40.03%), Postives = 311/607 (51.24%), Query Frame = 3
Query: 450 GQLFSMAKPPGGAVGSVPWKEAPFSALAMGHQVQQGAAREVLFGNGTGTVWETVRHAMTKQRR------IPLFNISTNLSNQCGHMSFLILALAYLETDVLALRGYAASGIGLSILFQFYRP--QPLWIPIGWNGLFLLINTSMIGLLLRERSEAANIGDDPEQAKTFEEVFKRVELSPVDFVRLMDVAERRMVPKGTCLSQEGRVQEEVFLIVEGAAQVEAEGGAVGHLEQKQFVGSMAFNRFIQASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDNNSSTHKGSGEIMGVPASLGGHERDEVSKDFMGGVEEGDXXXXXXXXXXXXXXXXXXXGVFEEAKEVALNVLRRE-SIVGNIAMAQSFVLDAEGHRRHGVGEMERSGTTVTATTEMVVYAWDMHLLRAFIKRRSLAGAAFMKAISADLIRKVDQSRGAEERYRLLLAEALDGGVITPIEKKKLHRYRDMHGISTKEHKELLKEYEWREEEFEAGFQKGVAPRDGSEHFLAYEALVRRELAKGEVRDKGRQKLRKFRAKAGIDAQEHLLALEKQASMTAQGSGPTAGWTADDYELGGK 2243
G+ FS A P V +PW PF L + M ++RR I N TN CGH SF +L LAYLETDVL LR A G L+++F +R P+WIPI WN FLL+NT M+ LL+ ER EA + +DPEQA+ + ++F+ V LSPV F+RLMDVAERR+VPKG L G +EV LI+EG A+V++EG AV H+E+ F+GSMAF R + + V A L + V KD G+F +A E L LRR+ S+VG +A Q+ V D R+ +G +ERS +TVTAT+++VVY WD H LR FIKRR + GA KAI+ DL+ KVDQSR E YR LLAE LDGG +T E+K L RYR+ HGIS EH + L++ +W EEEFEAGFQ GVA +++FL YEAL+R+ELAKG+V+ R LRKFR++ GIDAQEHL+A+EKQ GWTADDYE G K
Sbjct: 67 GRTFS-AVAPKPMVTMIPWVPPPFQPLM-----------------------NRLHPIMIRERRPMAWCGIEALNTVTNAGALCGHFSFALLTLAYLETDVLKLRYLVACGSTLNVMFNLFRVVGPPVWIPIKWNAGFLLLNTIMVILLMNERQEADRLKEDPEQARIYHDIFESVNLSPVQFLRLMDVAERRVVPKGANLKDGGAPHKEVILIIEGTAEVKSEGVAVSHMEKGGFIGSMAFMRLSKK---------------------------------------------------------------------------LSV-AKLASDDGHYVYKD---------------------------GGMFRKAWEAVLGQLRRDGSVVGEVA--QAVVGDKTLKRQDTMG-LERSMSTVTATSDVVVYVWDQHALREFIKRRPMIGAFLQKAITVDLVNKVDQSRDHHEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISFDEHLDRLRDNKWTEEEFEAGFQMGVA----TQNFLEYEALLRKELAKGKVKPDARSNLRKFRSQVGIDAQEHLIAVEKQ------------GWTADDYEAGAK 527
BLAST of mRNA_C-linearis_contig74.15050.1 vs. uniprot
Match: D7FN16_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN16_ECTSI) HSP 1 Score: 347 bits (889), Expect = 5.850e-105 Identity = 241/623 (38.68%), Postives = 319/623 (51.20%), Query Frame = 3
Query: 402 ARRSVLGRRQTLESRPGQLFSMAKPPGGA---VGSVPWKEAPFSALAMGHQVQQGAAREVLFGNGTGTVWETVRHAMTKQRRIPLF---NISTNLSNQCGHMSFLILALAYLETDVLALRGYAASGIGLSILFQFYRPQPLWIPIGWNGLFLLINTSMIGLLLRERSEAANIGDDPEQAKTFEEVFKRVELSPVDFVRLMDVAERRMVPKGTCLSQEGRVQEEVFLIVEGAAQVEAEGGAVGHLEQKQFVGSMAFNRFIQASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDNNSSTHKGSGEIMGVPASLGGHERDEVSKDFMGGVEEGDXXXXXXXXXXXXXXXXXXXGVFEEAKEVALNVLRRESIVGNIAMAQSFVLDAEGHRRHGVGEMERSGTTVTATTEMVVYAWDMHLLRAFIKRRSLAGAAFMKAISADLIRKVDQSRGAEERYRLLLAEALDGGVITPIEKKKLHRYRDMHGISTKEHKELLKEYEWREEEFEAGFQKGVAPRDGSEHFLAYEALVRRELAKGEVRDKGRQKLRKFRAKAGIDAQEHLLALEKQASMTAQGSGPTAGWTADDYELGGKGKA 2252
A RS LG S G ++ KP + + +VP EA + QV++ A +F MT +R+ F N +T + CGH SF I L YLETD L R +G L + F +YR PL I I W L L++N+ ++ +L ER+EA + +DPE+++ FEE+F +L+PV+F+RLMD+A+RR+ KG + Q GR E++FLIVEG A+V++EG V HLE F+GSMAF RF Q + + +N SS + G G+ G ++ KE L+ +R++ I+G +A +S V D G R H +MERS TTVTAT+++V YAWDMH L AF+KRR L GA+ KA++ D I KV QSRG EERYRLLL E+LD G I PI ++KL RYR+ H IS + HK LKE W EEE+ GFQ+ APRDGS FL YEALV REL+ GEV + R LRKFR++A IDAQEHLLA++KQ GWTADDYE G KG A
Sbjct: 30 AARSALG-----SSYGGSRLAVMKPARASSRQLSAVPKGEAEQAETVFERQVREAKADFKVF--------------MTTERQPLKFAGLNFTTTIGMLCGHASFGIATLVYLETDPLTTRVMVFTGATLGLFFSYYRHPPLIISIKWLTLTLILNSFLLAILWNERAEAEELNNDPEKSRIFEELFMPFDLNPVEFLRLMDLADRRVWMKGNDICQAGRPHEDMFLIVEGTAEVKSEGETVSHLEPGGFIGSMAFQRFTQEAEAPVDVTPEVVRRNTINSSDFVYIDSIIL--------------------------------ENGSSVY-GGGD---------GRSTRKI------------------------------------VKEAFLHFMRQDHIIGKVA--RSLVSDVMGMRVHE-DDMERSKTTVTATSDVVTYAWDMHELHAFLKRRPLIGASLQKAMAEDFINKVYQSRGHEERYRLLLVESLDPGSINPIGREKLRRYRETHHISEEVHKGFLKEQGWTEEEYYMGFQQNKAPRDGSARFLEYEALVSRELSGGEVTPEARSNLRKFRSQAHIDAQEHLLAIQKQ------------GWTADDYEAGEKGAA 540
BLAST of mRNA_C-linearis_contig74.15050.1 vs. uniprot
Match: D8LD27_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD27_ECTSI) HSP 1 Score: 302 bits (773), Expect = 5.470e-89 Identity = 193/463 (41.68%), Postives = 258/463 (55.72%), Query Frame = 3
Query: 873 RERSEAANIGDDPEQAKTFEEVFKRVELSPVDFVRLMDVAERRMVPKGTCLSQEGRVQEEVFLIVEGAAQVEAEGGAVGHLEQKQFVGSMAFNRFIQASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDNNSSTHKGS-GEIMGVPASLGGHE-RDEVSKDFMGGVEEGDXXXXXXXXXXXXXXXXXXXGVFEEAKEVALNVLRRESIVGNIAMAQSFVLDAEGHRRHGVGEMERSGTTVTATTEMVVYAWDMHLLRAFIKRRSLAGAAFMKAISADLIRKVDQSRGAEERYRLLLAEALDGGVITPIEKKKLHRYRDMHGISTKEHKELLKEYEWREEEFEAGFQKGVAPRDGSEHFLAYEALVRRELAKGEVRDKGRQKLRKFRAKAGIDAQEHLLALEKQASMTAQGSGPTAGWTADDYELGGKGKAA 2255
+E+ +A G DPEQA+ ++++F V+L+PV+F++LM A+RR+V +G ++Q+GR EE+FLIVEG A V +EG V LE FVGSMAFN FIQ +P +S+H + G PA G + +D+ F+ G+ GD GV + K+V N+LR +S+VGN+A+ S V D + +G+ME + TVTAT+++VVY WD H LRAFIKRR L GA KAIS D KV+QSRG + +YR+LL E L+GG I EK+KL RYR+ HGI+ +EHK +L E W EEEFE GFQ GVAPR GS+HF+ YEALV+RELA+GEV+ + + L FR AGIDAQEH+LAL KQ GWT DDYE+G KG ++
Sbjct: 3 KEKEDAEEFGKDPEQARIYQDIFMPVDLNPVEFMQLMGQAQRRVVLEGNDINQQGRPHEEMFLIVEGTADVRSEGEDVCRLEPGGFVGSMAFNAFIQEAPV--------------------------------------------------------------ASSHTAARGTADAWPAGGGRSDGKDQADSVFIEGLVVGDGGYKYGGK-----------GVLDLVKDVIFNMLRGDSVVGNVAL--SLVPDVVDGPKD-LGKMECTKNTVTATSDVVVYVWDQHALRAFIKRRPLIGAGLQKAISEDFSNKVNQSRGHKTKYRMLLEETLEGGEINQTEKRKLQRYRETHGIALEEHKFMLSERGWTEEEFEVGFQPGVAPRQGSQHFVKYEALVQRELAQGEVKPESKLYLLNFRKHAGIDAQEHILALGKQ------------GWTVDDYEVGVKGMSS 377
BLAST of mRNA_C-linearis_contig74.15050.1 vs. uniprot
Match: A0A835ZD23_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD23_9STRA) HSP 1 Score: 263 bits (671), Expect = 5.020e-74 Identity = 181/537 (33.71%), Postives = 256/537 (47.67%), Query Frame = 3
Query: 645 LFNISTNLSNQCGHMSFLILALAYLETDVLALRGYAASGIGLSILFQFYRPQPLWIPIGWNGLFLLINTSMIGLLLRERSEAANIGDDPEQAKTFEEVFKRVELSPVDFVRLMDVAERRMVPKGTCLSQEGRVQEEVFLIVEGAAQVEA-EGGAVGHLEQKQFVGSMAFNRFIQASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDNNSSTHKGSGEIMGVPASLGGHERDEVSKDFMGGVEEGDXXXXXXXXXXXXXXXXXXXGVFEEAKEVALNVLRRESIVGNIAMAQSFVLDAEGHRRHGVGEMERSGT--TVTATTEMVVYAWDMHLLRAFIKRRSLAGAAFMKAISADLIRKVDQSRGAEER---YRLLLAEALDGGVITPIEKKKLHRYRDMHGISTKEHKELLKEYEWREEEFEAGFQKGVAPRDGSEHFLAYEALVRRELAKGEVRDKGRQKLRKFRAKAGIDAQEHLLALEKQASMTAQGSGPTAGWTADDYELG 2237
L + TN SN CGH SFL+LAL Y+E+DVL LR ++A GI LS+LFQ+YRPQPLWIPI WN +FLLIN MI LL+ ER +A + D E+ + F+++F ++ LS V+F+ L+ +AER +P GT L+ Q++V+LI++G A+V+ +G +GH+ QFVGSMAF RF+ D N S + + L E E+ D G + + +D H H + V ATTE VYAWD HLLRA++KR L G A ISADL RK+DQSR R YR LL AL GG + P EK+KL R+R+ H I+ EH +L + W + ++E G+Q+ F AYE ++++EL G + + GR +LR++R+++ I+ Q+HLLA+ K GWT + YE+G
Sbjct: 21 LLSFKTNWSNLCGHGSFLMLALGYMESDVLLLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTIFLLINGGMIALLVNERRQATRL-DSTEERELFDQMFAKLGLSAVEFLHLIRLAERETLPAGTTLATFNEPQDKVYLIIDGTAEVQGGDGDLIGHISNFQFVGSMAFLRFLNEVQEHER--------------------------------------------------------DRNRERQVVSSLLAALANELD-PEHWEIEPD------------------------------------------------GTVVATATMAVDP--HMPHSLHPFSWCVCMYAVRATTECHVYAWDFHLLRAYLKRHPLEGNAMQVTISADLTRKLDQSRDPHIRQVEYRQLLLTALSGGELLPTEKRKLQRFRENHDITLAEHDAMLAQLGWTKPDYETGYQQKAITAS----FAAYERMLQQELRGGTLNEDGRARLRRYRSQSNINPQQHLLAIAK------------LGWTYEQYEMG 433
BLAST of mRNA_C-linearis_contig74.15050.1 vs. uniprot
Match: D8LD39_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD39_ECTSI) HSP 1 Score: 253 bits (645), Expect = 6.070e-71 Identity = 173/420 (41.19%), Postives = 218/420 (51.90%), Query Frame = 3
Query: 981 MDVAERRMVPKGTCLSQEGRVQEEVFLIVEGAAQVEAEGGAVGHLEQKQFVGSMAFNRFIQASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDNNSSTHKGSGEIMGVPASLGGHERDEVSKDFMGGVEEGDXXXXXXXXXXXXXXXXXXXGVFEEAKEVALNVLRRE-SIVGNIAMAQSFVLDAEGHRRHGVGEMERSGTTVTATTEMVVYAWDMHLLRAFIKRRSLAGAAFMKAISADLIRKVDQSRGAEERYRLLLAEALDGGVITPIEKKKLHRYRDMHGISTKEHKELLKEYEWREEEFEAGFQKGVAPRDGSEHFLAYEALVRRELAKGEVRDKGRQKLRKFRAKAGIDAQEHLLALEKQASMTAQGSGPTAGWTADDYELG 2237
MD AERR++ KG L QEGR EEVFLIVEG A+V +EG AV HL+ FVGSMAFNRFI+ + + N S +G V D G+F +A + L LR++ S+VG + QS V D + R+ +ERS TTVTA++++VVY WD H LR FIKRR + GA KAIS DL+ KV QSR +E YR LLAE LDGG +T E+K L RYR+ HGIS EH E LKE W +EF+AGF++GVAP+D SE+FL YEAL+R+ELAKGE+ + + LRKFR++ GIDAQEHL+A+EKQ GWTAD+YE G
Sbjct: 1 MDAAERRVMLKGNDLIQEGRPHEEVFLIVEGQAEVRSEGVAVSHLQSGGFVGSMAFNRFIKKTTA------------------------------------------------------------NPHSDREGH----------------YVYND---------------------------GGMFRKAWQAILAQLRKQGSVVGEVT--QSIVGDQKSKRQEK-SALERSTTTVTASSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISMAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRKELAKGELNPEAKSNLRKFRSQKGIDAQEHLIAVEKQ------------GWTADEYEAG 302
BLAST of mRNA_C-linearis_contig74.15050.1 vs. uniprot
Match: A0A835YLU4_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU4_9STRA) HSP 1 Score: 250 bits (638), Expect = 1.950e-68 Identity = 182/577 (31.54%), Postives = 264/577 (45.75%), Query Frame = 3
Query: 639 IPLFNISTNLSNQCGHMSFLILALAYLETDVLALRGYAASGIGLSILFQFYRPQPLWIPIGWNGLFLLINTSMIGLLLRERSEAANIGDDPEQAKTFEEVFKRVELSPVDFVRLMDVAERRMVPKGTCLSQEGRVQEEVFLIVEGAAQV-----------EAEGGAVGHLE---------------------------------QKQFVGSMAFNRFIQASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDNNSSTHKGSGEIMGVPASLGGHERDEVSKDFMGGVEEGDXXXXXXXXXXXXXXXXXXXGVFEEAKEVALNVLRRESIVGNIAMAQSFVLDAEGHRRHGVGEMERSGTTVTATTEMVVYAWDMHLLRAFIKRRSLAGAAFMKAISADLIRKVDQSRGAEERYRLLLAEALDGGVITPIEKKKLHRYRDMHGISTKEHKELLKEYEWREEEFEAGFQKGVAPRDGSEHFLAYEALVRRELAKGEVRDKGRQKLRKFRAKAGIDAQEHLLALEKQASMTAQGSGPTAGWTADDYELG 2237
+P +++TN SN CGH SFL+LAL Y+E+DV+ LR ++A GI LS+LFQ+YRPQPLWIPI WN LFLLIN MI L+ ER +A ++ DD E+ +EE+F ++ LS V+ + +M +AE++++P GT ++ G+ ++ +LI +G + + +G + L + QFVGSMAF RF+ D G ++ V A G + GGV+ G ++ V +A ++ E + + S TTV TTE V+AWD HLLRA++K L G A ISADL RK+DQSR RYR LL AL GG + P EK KL YR+ HGI+T+EH+E+L + W ++ G+Q+ + F AYE L+ +EL G + ++GR +LR+FR+++ IDA +HLLAL K GWT + YE+G
Sbjct: 67 LPPLSLTTNFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHL-DDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHDGDPISSLACSSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLNTVHDHERDRDNERAVLNSLLAALAAEL------------------------------------DPEHWEIDPDGRVVAVAAPHG---------EGQGGVQAG-------------------------XXXXXXXXXXQQQGVAAVAAGEAA---QEDEQEESEESLCISSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSRDPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAI----TSAFAAYEDLLHQELKNGRLNEEGRARLRRFRSQSNIDATKHLLALAK------------LGWTYEQYEMG 553
BLAST of mRNA_C-linearis_contig74.15050.1 vs. uniprot
Match: A0A6H5JW21_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW21_9PHAE) HSP 1 Score: 248 bits (632), Expect = 3.150e-67 Identity = 190/514 (36.96%), Postives = 239/514 (46.50%), Query Frame = 3
Query: 915 QAKTFEEVFKRVELSPVDFVRLMDVAERRMVPKGTCLSQEGRVQEEVFLIVEGAAQVEAEGGAVGHLEQKQFVGSMAFNRFIQASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDNNSSTHKGSGEIMGVPASLGGHERDEVSKDFMGGVEEGDXXXXXXXXXXXXXXXXXXXGVFEEAKEVALNVLRRE-SIVGNIAMAQSFVLDAEGHRRHGVGEMERSGTTVTATTEMVVYAWDMHLLRAFIKRRSLAGAAFMKAISADLIRKVDQSRGAEERYRLLLAEALDGGVITPIEKKKLHR-----------------------YRDMHGISTKEHKELLKEYEWREEEFEAGFQKGVAPRDGSEHFLAYEALVRRELAKGE-------------------------------------------------VRDKGRQKLRKFRAKAGIDAQEHLLALEKQASMTAQGSGPTAGWTADDYELG 2237
QA+ + E+F+RV+LSPV F+RLMD AERR+V KG L Q+GR EE+FLIVEG A+V +EG AV HL+ FVGSMAFNRFI+ + S+ H A GH V KD G+F +A E L LR++ S+VG + QS V D + R+ +ERS TTVTAT++MVVY WD H LR FIKRR + GA+ KAIS DL+ KV QSR +E YR LLAE LDGG +T E+K L R YR+ HGIS EH + LKE W +EF+AGF++GVAP+D SE+FL YEAL+R ELAKGE + + + LRKFR++ GIDAQEHL+A+EKQ GWTAD+YE G
Sbjct: 51 QARIYREIFERVQLSPVHFLRLMDAAERRVVLKGNDLIQDGRPHEEMFLIVEGQAEVRSEGVAVSHLQSGGFVGSMAFNRFIKKT---------------------------------------------------------------TSNPH----------ADREGHY---VYKD---------------------------GGMFRKAWEAILAQLRKQGSVVGEVT--QSIVGDQKSKRQEK-SALERSTTTVTATSDMVVYVWDQHALREFIKRRPMIGASLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRWVKGRKDGGKVSLLGGCTCDGRWYREGHGISMAEHFQRLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGEYHFCAFFFCCVFVIASSCCNEPPRSPSYRQFASCLVLVSFSPNGFDDDQLNPEAKSNLRKFRSQKGIDAQEHLIAVEKQ------------GWTADEYEAG 446 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig74.15050.1 >prot_C-linearis_contig74.15050.1 ID=prot_C-linearis_contig74.15050.1|Name=mRNA_C-linearis_contig74.15050.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=793bp MISLRKMGCGRAALRSSSSSSGGSSRAARRSVLGRRQTLESRPGQLFSMAback to top mRNA from alignment at C-linearis_contig74:715479..727949+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig74.15050.1 ID=mRNA_C-linearis_contig74.15050.1|Name=mRNA_C-linearis_contig74.15050.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=12471bp|location=Sequence derived from alignment at C-linearis_contig74:715479..727949+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig74:715479..727949+ >mRNA_C-linearis_contig74.15050.1 ID=mRNA_C-linearis_contig74.15050.1|Name=mRNA_C-linearis_contig74.15050.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4758bp|location=Sequence derived from alignment at C-linearis_contig74:715479..727949+ (Chordaria linearis ClinC8C monoicous)back to top |