mRNA_C-linearis_contig74.15044.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig74.15044.1 vs. uniprot
Match: D8LD32_ECTSI (Guanylate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD32_ECTSI) HSP 1 Score: 381 bits (979), Expect = 1.640e-126 Identity = 189/250 (75.60%), Postives = 216/250 (86.40%), Query Frame = 3
Query: 138 RDSIRADQASYLNEHPEIVTLLNGFIRAVVEKKPSDVFEFARQHF-GAGDGRQVKVMRSIIGAVVVAGPSGAGKGTIIRKFMELFPNQFGFGCSHTTRGRREGEVDGVHYHFTDLESMREAFNRGDFIEHAEVHGNLYGTSVAAVDDVTKRGKVCLLDIDVQGVKSVKASSLSPKFVFIAPPSLEVLEKRLRDRGTEDDKSLTTRLHNAREEIEYGNAEGNFDLVVENDDLDKAVNTLSTRLMEWFPKIK 884
+++IRADQ +YL EHPE+ +LLN F+RAVVE+KP DVFEFARQHF GAG R + AVVVAGPSG GKGTIIRK MELFP QFGFGCSHTTRGRREGE +GVHYHFT L++MREA RG+FIEHAEVHGNLYGTSVAAV DVTK+G+VCLLDID+QGVK+VKAS L PK+VFIAPPS+EVLE RLRDRGTE ++SL+TRLHNAREE++YG +GNFDLVVENDDLD+AV LS+RL EWFPKIK
Sbjct: 7 QNTIRADQEAYLQEHPEVASLLNDFLRAVVEQKPEDVFEFARQHFAGAGVDR--------VDAVVVAGPSGVGKGTIIRKLMELFPQQFGFGCSHTTRGRREGEQEGVHYHFTSLDAMREAVARGEFIEHAEVHGNLYGTSVAAVGDVTKKGQVCLLDIDIQGVKTVKASPLRPKYVFIAPPSMEVLENRLRDRGTESEESLSTRLHNAREEVDYGTTQGNFDLVVENDDLDQAVRNLSSRLTEWFPKIK 248
BLAST of mRNA_C-linearis_contig74.15044.1 vs. uniprot
Match: A0A6H5L1D9_9PHAE (Guanylate kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D9_9PHAE) HSP 1 Score: 281 bits (718), Expect = 1.640e-88 Identity = 134/169 (79.29%), Postives = 151/169 (89.35%), Query Frame = 3
Query: 378 MELFPNQFGFGCSHTTRGRREGEVDGVHYHFTDLESMREAFNRGDFIEHAEVHGNLYGTSVAAVDDVTKRGKVCLLDIDVQGVKSVKASSLSPKFVFIAPPSLEVLEKRLRDRGTEDDKSLTTRLHNAREEIEYGNAEGNFDLVVENDDLDKAVNTLSTRLMEWFPKIK 884
MELFP QFG CSHTTRGRREGE +GVHYHFT L++MREA +G+FIEHAEVHGNLYGTSVAAV DV+KRG+VCLLDID+QGVK+VKAS L PK+VFIAPPS+EVLE RLRDRGTE ++SL+TRLHNAREE++YG EGNFDLVVENDDLD+AV LS RL EWFPKIK
Sbjct: 1 MELFPQQFGLACSHTTRGRREGEQEGVHYHFTSLDTMREAVAKGEFIEHAEVHGNLYGTSVAAVGDVSKRGQVCLLDIDIQGVKTVKASPLRPKYVFIAPPSMEVLENRLRDRGTESEESLSTRLHNAREEVDYGTTEGNFDLVVENDDLDQAVRNLSGRLAEWFPKIK 169
BLAST of mRNA_C-linearis_contig74.15044.1 vs. uniprot
Match: A0A7S3UUW8_HETAK (Guanylate kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUW8_HETAK) HSP 1 Score: 275 bits (704), Expect = 4.820e-85 Identity = 135/257 (52.53%), Postives = 184/257 (71.60%), Query Frame = 3
Query: 111 EEIARLDGLRDSIRADQASYLNEHPEIVTLLNGFIRAVVEKKPSDVFEFARQHFGAGDGRQVKVMRSIIGAVVVAGPSGAGKGTIIRKFMELFPNQFGFGCSHTTRGRREGEVDGVHYHFTDLESMREAFNRGDFIEHAEVHGNLYGTSVAAVDDVTKRGKVCLLDIDVQGVKSVKASSLSPKFVFIAPPSLEVLEKRLRDRGTEDDKSLTTRLHNAREEIEYGNAEGNFDLVVENDDLDKAVNTLSTRLMEWFPKI 881
EEIA+L+ + ++A +Y+ +HPEI TLLN F+ A + +KP ++ FAR+HF +K + +VVAGPSG GKGTII+ + + +FGF SHTTRG REGE +GVHYHFTD +MR G FIEHAEVHGNLYGTSVAAV V++ GK+C+LDIDVQGV+ VKAS+L PK++FI+PPS+EVLE+RLR R TE ++++T RL A+ E++Y +GNFD V ND+LD V + ++L+EW+P +
Sbjct: 11 EEIAQLNERKAELKAQHMAYVEDHPEIKTLLNDFVCACLLEKPDNILNFAREHFA-----NMKPKMEGLQPLVVAGPSGVGKGTIIKIIQDKYSGKFGFSVSHTTRGPREGEENGVHYHFTDQAAMRAEIEDGKFIEHAEVHGNLYGTSVAAVQSVSEEGKICILDIDVQGVQKVKASALEPKYIFISPPSMEVLEERLRGRKTETEEAITKRLAGAQAEMDYSAGDGNFDRVFINDNLDTCVADIESQLLEWYPSL 262
BLAST of mRNA_C-linearis_contig74.15044.1 vs. uniprot
Match: A0A7S2Y427_9STRA (Guanylate kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y427_9STRA) HSP 1 Score: 274 bits (701), Expect = 2.000e-84 Identity = 135/257 (52.53%), Postives = 179/257 (69.65%), Query Frame = 3
Query: 111 EEIARLDGLRDSIRADQASYLNEHPEIVTLLNGFIRAVVEKKPSDVFEFARQHFGAGDGRQVKVMRSIIGAVVVAGPSGAGKGTIIRKFMELFPNQFGFGCSHTTRGRREGEVDGVHYHFTDLESMREAFNRGDFIEHAEVHGNLYGTSVAAVDDVTKRGKVCLLDIDVQGVKSVKASSLSPKFVFIAPPSLEVLEKRLRDRGTEDDKSLTTRLHNAREEIEYGNAEGNFDLVVENDDLDKAVNTLSTRLMEWFPKI 881
EEI++L+ + ++A Y+ HPEI T+LN + A + +KP ++F FA +HF + S +V+AGPSG GKGTII++ ME P++FGF SHTTRG R GE +GVHYHFTD E+M+ + G F+E AEVHGNLYGTSV AV+DV K GK+C+LDIDVQGV+ VK S L P ++F++PPSLE LE+RLRDR TE ++ + RL NA+ E+EYG EGNF+ V+ NDDLD AV L+EW+P I
Sbjct: 27 EEISQLNDRKAELKAAHLKYVETHPEIKTMLNDLVCACLLEKPGNIFAFAEKHFASKS--------SFTKPLVIAGPSGVGKGTIIKRVMEHMPDKFGFCVSHTTRGPRPGEENGVHYHFTDRETMQTQIDNGQFVEFAEVHGNLYGTSVEAVNDVRKTGKICVLDIDVQGVQKVKESDLDPMYIFVSPPSLETLEQRLRDRKTETEEQIERRLGNAKREMEYGKGEGNFNAVLINDDLDTAVEECKVLLLEWYPTI 275
BLAST of mRNA_C-linearis_contig74.15044.1 vs. uniprot
Match: A0A6A3F572_9STRA (Guanylate kinase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F572_9STRA) HSP 1 Score: 256 bits (655), Expect = 9.500e-78 Identity = 125/260 (48.08%), Postives = 177/260 (68.08%), Query Frame = 3
Query: 111 EEIARLDGLRDSIRADQASYLNEHPEIVTLLNGFIRAVVEKKPSDVFEFARQHFGAGDGRQVKVMRSIIGAVVVAGPSGAGKGTIIRKFMELFPNQFGFGCSHTTRGRREGEVDGVHYHFTDLESMREAFNRGDFIEHAEVHGNLYGTSVAAVDDVTKRGKVCLLDIDVQGVKSVKASSLSPKFVFIAPPSLEVLEKRLRDRGTEDDKSLTTRLHNAREEIEYGNAEGNFDLVVENDDLDKAVNTLSTRLMEWFPKIKIR 890
EE++ L+ +++++ D A+Y+ HPEI TLL+GF+ A++ +KP DV FA HF A + + + +V+AGPSG GKGT+I +E FP+ FGF SHTTRG REGEVDGV YHFT E + + G F+EHAEVHGN+YGTS AV DV ++GK+C+LDID+QGV+ VKAS + KF+FIAPPS++ LEKRLR R TE + + R+ NA E+ YG G FD ++ N +D + L+ L +W+P ++++
Sbjct: 18 EELSLLNERKEALKKDHAAYVESHPEIKTLLSGFMSALLLEKPQDVVAFAADHFSA-----FQPPHAELPPIVIAGPSGVGKGTLINLLLEKFPSTFGFSVSHTTRGPREGEVDGVAYHFTQKEQVLKEIEAGLFLEHAEVHGNVYGTSKRAVQDVQQKGKICILDIDIQGVQQVKASGIRAKFLFIAPPSMDELEKRLRGRATETEDKIQLRVKNAAGELAYGQQPGVFDAILVNKVVDDSFRELTDTLKQWYPTVELK 272
BLAST of mRNA_C-linearis_contig74.15044.1 vs. uniprot
Match: A0A835ZG07_9STRA (Guanylate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG07_9STRA) HSP 1 Score: 256 bits (653), Expect = 4.910e-77 Identity = 131/269 (48.70%), Postives = 173/269 (64.31%), Query Frame = 3
Query: 108 LEEIARLDGLRDSIRADQASYLNEHPEIVTLLNGFIRAVVEKKPSDVFEFARQHFGAGDGRQVKVMRSIIGAV------VVAGPSGAGKGTIIRKFMELFPNQFGFGCSHTTRGRREGEVDGVHYHFTDLESMREAFNRGDFIEHAEVHGNLYGTSVAAVDDVTKRGKVCLLDIDVQGVKSVKASSLSPKFVFIAPPSLEVLEKRLRDRGTEDDKSLTTRLHNAREEIEYGNAEGNFDLVVENDDLDKAVNTLSTRLMEWFPKIKIRAA 896
++E+ RL+ R ++AD YL +HPE+ ++LN F+ V+ +KP DV FAR HF +R I G V ++AGPSG GKGTII++ E FP+Q GF SHTTR R GEV GVHYHF+ ++ M+ A G FIEHA VHGN YGTS AV V+ GKVC LDID+ GVK VK ++L P +VF+APPS LE RLR R TE + + RL A E+EYG G FD+V+ NDDL++AV+ L +L +W+P ++ AA
Sbjct: 21 MQELERLNDRRALLKADHTRYLKQHPELTSILNDFLTEVLARKPDDVQAFARAHFS---------LRPIPGTVKGLRPLLIAGPSGVGKGTIIKRIFERFPDQLGFSVSHTTRKPRPGEVGGVHYHFSTVDGMKAAIGEGKFIEHAVVHGNYYGTSAEAVAQVSHAGKVCCLDIDIAGVKLVKQTALDPHYVFVAPPSFATLEARLRGRQTESEADILKRLSAAAAEMEYGAQPGAFDVVLVNDDLERAVDALCAQLRQWYPSLREAAA 280
BLAST of mRNA_C-linearis_contig74.15044.1 vs. uniprot
Match: A0A833TGN4_PHYIN (Guanylate kinase n=6 Tax=Phytophthora TaxID=4783 RepID=A0A833TGN4_PHYIN) HSP 1 Score: 250 bits (639), Expect = 5.110e-75 Identity = 122/260 (46.92%), Postives = 176/260 (67.69%), Query Frame = 3
Query: 111 EEIARLDGLRDSIRADQASYLNEHPEIVTLLNGFIRAVVEKKPSDVFEFARQHFGAGDGRQVKVMRSIIGAVVVAGPSGAGKGTIIRKFMELFPNQFGFGCSHTTRGRREGEVDGVHYHFTDLESMREAFNRGDFIEHAEVHGNLYGTSVAAVDDVTKRGKVCLLDIDVQGVKSVKASSLSPKFVFIAPPSLEVLEKRLRDRGTEDDKSLTTRLHNAREEIEYGNAEGNFDLVVENDDLDKAVNTLSTRLMEWFPKIKIR 890
EE++ L+ +++++ + +Y++EHPEI TLL+GF+ A++ +KP +V FA +HF A K + + +V+AGPSG GKGT+I +E FPN FGF SHTTRG REGEVDGV YHFT + + + G F+EHAEVHGN+YGTS AV DV ++GK+C+LDID+QGV+ VK S + K++FIAPPS+E LE RLR R TE + + R+ NA E+ YG G FD ++ N +D + L L +W+P ++++
Sbjct: 44 EELSLLNERKEALKKEHTAYVDEHPEIKTLLSGFMSALLLEKPQNVVAFAVEHFSA-----FKPPHTELEPIVIAGPSGVGKGTLINLLLEKFPNTFGFSVSHTTRGPREGEVDGVAYHFTAKDKVLKEIEAGLFLEHAEVHGNVYGTSKRAVQDVQEKGKICILDIDIQGVQQVKKSGIPAKYLFIAPPSMEELETRLRGRATETEDKIQLRVKNAAGELAYGQQPGVFDAILVNQVVDDSFRELVETLKQWYPTVELK 298
BLAST of mRNA_C-linearis_contig74.15044.1 vs. uniprot
Match: A0A0W8C585_PHYNI (Guanylate kinase n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C585_PHYNI) HSP 1 Score: 258 bits (660), Expect = 6.860e-74 Identity = 126/260 (48.46%), Postives = 177/260 (68.08%), Query Frame = 3
Query: 111 EEIARLDGLRDSIRADQASYLNEHPEIVTLLNGFIRAVVEKKPSDVFEFARQHFGAGDGRQVKVMRSIIGAVVVAGPSGAGKGTIIRKFMELFPNQFGFGCSHTTRGRREGEVDGVHYHFTDLESMREAFNRGDFIEHAEVHGNLYGTSVAAVDDVTKRGKVCLLDIDVQGVKSVKASSLSPKFVFIAPPSLEVLEKRLRDRGTEDDKSLTTRLHNAREEIEYGNAEGNFDLVVENDDLDKAVNTLSTRLMEWFPKIKIR 890
EE++ L+ +++++ D A+Y+ HPEI TLL+GF+ A++ +KP DV FA +HF A K + + +V+AGPSG GKGT+I +E FPN FGF SHTTRG REGEVDGV YHFT+ E + + G F+EHAEVH N+YGTS AV DV ++GK+C+LDID+QGV+ VK S + K++FIAPPS+E LEKRLR R TE + + R+ NA E+EYG G FD ++ N +D + L L +W+P ++++
Sbjct: 412 EELSLLNERKEALKKDHAAYVEAHPEIKTLLSGFMSALLLEKPQDVVAFAAEHFSA-----FKPPHTELEPIVIAGPSGVGKGTLINLLLEKFPNTFGFSVSHTTRGPREGEVDGVAYHFTEKEKVLKEIEAGLFLEHAEVHANVYGTSKRAVQDVQEKGKICILDIDIQGVQQVKKSGIRAKYLFIAPPSMEELEKRLRGRATETEDKIQLRVKNAAGELEYGQQPGVFDAILVNKVVDDSFRELVATLKQWYPTVELK 666
BLAST of mRNA_C-linearis_contig74.15044.1 vs. uniprot
Match: A0A8K1CJH5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJH5_PYTOL) HSP 1 Score: 246 bits (628), Expect = 8.320e-74 Identity = 120/259 (46.33%), Postives = 175/259 (67.57%), Query Frame = 3
Query: 111 EEIARLDGLRDSIRADQASYLNEHPEIVTLLNGFIRAVVEKKPSDVFEFARQHFGAGDGRQVKVMRSIIGAVVVAGPSGAGKGTIIRKFMELFPNQFGFGCSHTTRGRREGEVDGVHYHFTDLESMREAFNRGDFIEHAEVHGNLYGTSVAAVDDVTKRGKVCLLDIDVQGVKSVKASSLSPKFVFIAPPSLEVLEKRLRDRGTEDDKSLTTRLHNAREEIEYGNAEGNFDLVVENDDLDKAVNTLSTRLMEWFPKIKI 887
EE++ L+ +++I+ + +Y++ HPEI TLL+ F+ A++ +KP+DV FA++HF K + + +V+AGPSG GKGT+I K +E +P+ FGF SHTTRG R GEVDGV YHF E ++ + G FIE+A VHGN+YGTS AV+ V ++GK+C+LDID+QGV+ VK + L +F+FIAPPS+ LE+RLR RGTE ++ + R+ NA E++Y G FD + N DLD+ +TL L W+PK +
Sbjct: 14 EELSILNERKEAIKKEHLAYVDSHPEIKTLLSSFMSALLIEKPTDVLSFAKEHFAT-----YKPNYADLSPIVIAGPSGVGKGTLINKLLEQYPDTFGFSVSHTTRGPRPGEVDGVAYHFRAKEEVQAEIDAGLFIEYAHVHGNIYGTSKRAVEHVQEQGKICILDIDIQGVQLVKKAGLDCRFLFIAPPSMSELEQRLRGRGTETEEKVQLRIKNAAGELKYAQTPGAFDATLVNSDLDECYDTLLKTLQAWYPKTAL 267
BLAST of mRNA_C-linearis_contig74.15044.1 vs. uniprot
Match: A0A7S2RHX0_9STRA (Guanylate kinase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RHX0_9STRA) HSP 1 Score: 247 bits (631), Expect = 2.230e-73 Identity = 116/257 (45.14%), Postives = 178/257 (69.26%), Query Frame = 3
Query: 111 EEIARLDGLRDSIRADQASYLNEHPEIVTLLNGFIRAVVEKKPSDVFEFARQHFGAGDGRQVKVMRSIIGAVVVAGPSGAGKGTIIRKFMELFPNQFGFGCSHTTRGRREGEVDGVHYHFTDLESMREAFNRGDFIEHAEVHGNLYGTSVAAVDDVTKRGKVCLLDIDVQGVKSVKASSLSPKFVFIAPPSLEVLEKRLRDRGTEDDKSLTTRLHNAREEIEYGNAEGNFDLVVENDDLDKAVNTLSTRLMEWFPKI 881
++ + L+ +D ++ + Y+ HPE+ +++ F+ V+ KPSD+ +FA+ +F + + +++ GPSGAGKGT++R+ E F ++FG SHTTR REGE DGVHYHFT++ESM+ + +G+F+E+A VHGN+YGTS AV+DV +RG++C+L+IDVQGVK+V+ ++LSPK V+IAPPS EVLE+RLRDR TE ++ LT RL+NAR+E+ + + N D + NDDL+ + L L W+P +
Sbjct: 64 QQASDLNSRKDVLKEEHVKYIESHPELKHIMSDFLSQVLLIKPSDIRDFAKDYFAG----YLPPSAASTSPLIICGPSGAGKGTLVRRLFEEFGDKFGLSVSHTTRDPREGEEDGVHYHFTNVESMQGSIEKGEFVEYAHVHGNIYGTSFKAVNDVCERGQICVLEIDVQGVKAVRKTNLSPKCVYIAPPSFEVLEQRLRDRATESEEDLTKRLNNARDEMAWLDEPSNVDTKIVNDDLELSYRALKETLSRWYPGL 316 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig74.15044.1 >prot_C-linearis_contig74.15044.1 ID=prot_C-linearis_contig74.15044.1|Name=mRNA_C-linearis_contig74.15044.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=306bp MVNKITDPLSYGTDADQSILEEIARLDGLRDSIRADQASYLNEHPEIVTLback to top mRNA from alignment at C-linearis_contig74:690007..694460+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig74.15044.1 ID=mRNA_C-linearis_contig74.15044.1|Name=mRNA_C-linearis_contig74.15044.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4454bp|location=Sequence derived from alignment at C-linearis_contig74:690007..694460+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig74:690007..694460+ >mRNA_C-linearis_contig74.15044.1 ID=mRNA_C-linearis_contig74.15044.1|Name=mRNA_C-linearis_contig74.15044.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1836bp|location=Sequence derived from alignment at C-linearis_contig74:690007..694460+ (Chordaria linearis ClinC8C monoicous)back to top |