mRNA_C-linearis_contig74.15042.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig74.15042.1
Unique NamemRNA_C-linearis_contig74.15042.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig74.15042.1 vs. uniprot
Match: D8LD26_ECTSI (Flagellar outer dynein arm-docking complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD26_ECTSI)

HSP 1 Score: 865 bits (2236), Expect = 8.750e-313
Identity = 478/517 (92.46%), Postives = 490/517 (94.78%), Query Frame = 1
Query:    1 MSHNAHGKVSKFEDTSINRVKKQKEAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTEQDRRKIQELDRQIAATQARVLEQRQKMGGLNASQENNEMIAKQIRTLESRLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAIISDSNNAYHARDKAQSEMMALRQQAEKDRAEFDAEWKELGKLIAQDRKLRETLRQRQLDRSRDLRAEGECVGDGDEENRLMVCSSGEEWGAGAKDRQQTTLTFSQPEQSYEAAFNKIKGATGMTNVSDMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEKYKGQGVSTDTQRKKVLRGLEEQLSMTEGKADEYEGRYQTAMKTINQLKTGIHSIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYATSQQMTQAVETQEFTSPVEGGTA------DATVPLRLNVQPPTWDDFSSGEDSDQEDDERPLTREELKRK 1533
            MSHNAH K SKF+DTSINRVKKQKEAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTEQDRRKIQ+LDRQIAATQ+RVLEQRQKMGGLNASQENNEMIAKQIRTLE+RLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAII+DSNNAYHARDKAQSEMMALRQQAEKDRAEFDAEWKELGKLIAQDRKLRETLRQRQL+RSRDLRAEGE  GDGDE+ RLM  S  EEWGA AKDRQQTT  FSQPEQSYEAAFNKIK ATGMTNV+DMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEK+KGQGVSTDTQRKKVLRGLEEQLS+TEGKAD+YE RYQTAMKTINQLKTGIHSIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYA SQQMTQA ETQ FT  +EGG A      DATVPLRLNVQPP WDDFSSGEDSDQEDDERPLTREELKRK
Sbjct:    1 MSHNAHAKASKFDDTSINRVKKQKEAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTEQDRRKIQDLDRQIAATQSRVLEQRQKMGGLNASQENNEMIAKQIRTLENRLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAIINDSNNAYHARDKAQSEMMALRQQAEKDRAEFDAEWKELGKLIAQDRKLRETLRQRQLERSRDLRAEGESAGDGDEDARLMTGSGVEEWGANAKDRQQTT--FSQPEQSYEAAFNKIKEATGMTNVTDMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEKFKGQGVSTDTQRKKVLRGLEEQLSVTEGKADDYERRYQTAMKTINQLKTGIHSIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYAASQQMTQAAETQGFTPSLEGGAAGGAGAVDATVPLRLNVQPPAWDDFSSGEDSDQEDDERPLTREELKRK 515          
BLAST of mRNA_C-linearis_contig74.15042.1 vs. uniprot
Match: A0A835YL73_9STRA (Flagellar outer dynein arm-docking complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL73_9STRA)

HSP 1 Score: 556 bits (1433), Expect = 3.630e-191
Identity = 334/532 (62.78%), Postives = 397/532 (74.62%), Query Frame = 1
Query:   37 EDTSINRVKKQKEAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTEQDRRKIQELDRQIAATQARVLEQRQKMGGLNASQENNEMIAKQIRTLESRLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAIISDSNNAYHARDKAQSEMMALRQQAEKDRAEFDAEWKELGKLIAQDRKLRETLRQRQLDRSRDLRAEGECVGDGDEENRLMVC-------SSGEEWGAGAKDRQQTTLTFSQPEQSYEAAFNKIKGATGMTNVSDMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEKYKGQGVSTDTQRKKVLRGLEEQLSMTEGKADEYEGRYQTAMKTINQLKTGIHSIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYATSQQMTQAVETQEFTSPVEGGTADATVP----------------LR---LNVQPPTWDDFSSGEDSDQEDDERPLTREELKRKTLRGGGA 1554
            E++S  RVKKQ+  I++++  NE +K+DLA E+RESRF+TNP+A   I RLQDQAD+YAKK E +RRKI+ LD+QIA TQARVLEQRQKMGGLNAS+ENN+MIA+QI  LE+RLDKALVKFNESLA NK LRERID +RRERVVFD IYKKLERELHE+KKEMAAII DSNNAY ARDK+Q EM+ALRQQAEKDR EF++EWKELG+LI QDRKLR+TL+QRQ +++ +LR+    V DG                SS + WG    D            ++YEAAF +I+ ATG+  + D+VN+FL+AEEKNFSLFNFVN+LNSEIERLEL IAET N IE +KG GVSTD+QRKK LR LEEQL  TEG+A+EYE R + A+KTI QLK+GIHSIF RIGA S+SS EE+LGNQGVTESNMMQYLG+IEQRTSEIL AYA SQ     + +          TA +++                 LR   + VQPP  DD SSGEDSD ED+ERPLTR+ELK KTLRG GA
Sbjct:    7 EESSSMRVKKQQAMIETVQQSNEQMKTDLARESRESRFVTNPAAMKSIVRLQDQADLYAKKIEAERRKIEALDKQIAVTQARVLEQRQKMGGLNASEENNQMIARQINILENRLDKALVKFNESLAYNKTLRERIDAMRRERVVFDGIYKKLERELHERKKEMAAIIEDSNNAYRARDKSQGEMIALRQQAEKDRVEFESEWKELGELIEQDRKLRDTLQQRQQEKAAELRST--IVADGXXXXXXXXXXXXXXXXSSADAWGDAPADSA----------ENYEAAFKRIQEATGLEGMGDIVNSFLEAEEKNFSLFNFVNDLNSEIERLELSIAETANEIESHKGAGVSTDSQRKKALRDLEEQLVRTEGRAEEYEERCRAAVKTIAQLKSGIHSIFLRIGA-SHSSSEELLGNQGVTESNMMQYLGLIEQRTSEILAAYAQSQSGVGGISSAAVRLDSTSNTAASSIGGXXXXXXXXXAGPQGRLRGAAVAVQPPALDDLSSGEDSDGEDNERPLTRQELKSKTLRGMGA 525          
BLAST of mRNA_C-linearis_contig74.15042.1 vs. uniprot
Match: F0XWP0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWP0_AURAN)

HSP 1 Score: 496 bits (1276), Expect = 3.240e-168
Identity = 295/494 (59.72%), Postives = 362/494 (73.28%), Query Frame = 1
Query:   76 AIKSIRHGNELLKSDLAWEARESRF--ITNPSAAAEIQRLQDQADIYAKKTEQDRRKIQELDRQIAATQARVLEQRQKMGGLNASQENNEMIAKQIRTLESRLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAIISDSNNAYHARDKAQSEMMALRQQAEKDRAEFDAEWKELGKLIAQDRKLRETLRQRQLDRSRDLRAEGECVGDGDEENRLMVCSSGEEWGAGAKDRQQTTLTFSQPEQSYEAAFNKIKGATGMTNVSDMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEKYKGQGVSTDTQRKKVLRGLEEQLSMTEGKADEYEGRYQTAMKTINQLKTGIHSIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYATSQQMTQAVETQEFTSPVEGGTADATVPLRLNVQPPTWDDFSSGEDSDQEDDERPLTREELKRKTLRGGG 1551
            AI+ I+  NE LK DLA E+R+SR   + N +   E+QRLQ +AD+Y +K E +RRKI++LD +IA  Q  ++EQRQKMGG+NAS+EN++MI+KQIR LE+RLDKAL KFNESLAMNK LRE+ID LR+ERVVFD IYKKLE++LHEKKKEMAAII DS  AY   D+A  EM+AL+QQ +K++AEF+ EW++LGKL+ QDR+LRE LR++   R   L       G GD  ++++                           SYE  F KI+ ATG+  + D+V+ F   E+KNFSLFN +NELNS+IE  EL IAETK  IEKYKGQGVSTDTQRKKVLR LEE+L+ TE KADEY+ ++Q A KTINQLKTGIHSIFSR+G  S +SVEEMLGNQGVTESNMMQYL IIEQRT+EILQ YA SQQ T+  +     S ++ G        RL+VQPP WDDFSSG++SDQEDDERPLTREEL+RKTLRG G
Sbjct:   15 AIEKIQGENEALKQDLARESRQSRLTQVMNSNQGGEVQRLQMEADMYLRKIEGERRKIEQLDYKIAMAQRTIIEQRQKMGGINASKENHDMISKQIRILENRLDKALQKFNESLAMNKQLREQIDNLRKERVVFDGIYKKLEKDLHEKKKEMAAIIEDSKVAYQRSDRAMGEMVALKQQVDKEKAEFEREWRDLGKLMEQDRQLREQLRRQS--REEHLAGGARRSGGGDPHDKVV---------------------------SYEETFAKIREATGVETIKDLVDTFQDIEQKNFSLFNSINELNSDIEASELAIAETKLEIEKYKGQGVSTDTQRKKVLRDLEERLARTEAKADEYDLKHQNATKTINQLKTGIHSIFSRLGCAS-TSVEEMLGNQGVTESNMMQYLEIIEQRTTEILQMYAASQQSTK--DDLLANSALQSGIVQPAA-SRLSVQPPAWDDFSSGDESDQEDDERPLTREELQRKTLRGLG 475          
BLAST of mRNA_C-linearis_contig74.15042.1 vs. uniprot
Match: A0A482S1B7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1B7_9ARCH)

HSP 1 Score: 451 bits (1160), Expect = 2.450e-150
Identity = 271/513 (52.83%), Postives = 367/513 (71.54%), Query Frame = 1
Query:   22 KVSKFEDTSINRVKKQKEAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTEQDRRKIQELDRQIAATQARVLEQRQKMGGLNASQENNEMIAKQIRTLESRLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAIISDSNNAYHARDKAQSEMMALRQQAEKDRAEFDAEWKELGKLIAQDRKLRETLRQRQLDRSRD------LRAEGECVGDGDEENRLMVCSSGEEWGAGAKDRQQTTLTFSQPEQSYEAAFNKIKGATGMTNVSDMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEKYKGQGVSTDTQRKKVLRGLEEQLSMTEGKADEYEGRYQTAMKTINQLKTGIHSIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYATSQQMTQAVETQEFTSPVEGGTADATVPLRLNVQPPTWDDFSSGEDSDQEDDERPLTREELKRKTLR 1542
            ++S  ED  + RV +Q+E ++S++H NE+L+ DL  E R+++   +  AA++I RLQ++A  + KK E +R KI ELD+QI   Q  +L+Q+ ++GG+NA+Q NN++I KQI+ L++RLDK L KFNE++A NK LR +ID  RRER+VFD IYKKLER+LHEKKKEM AII+DS NAY ARDK+QSEM AL+Q AEK+RAEF++E+KELG LI Q + + E +R +Q +R+ +         EGE VG   E N +        W  G KD+    L+  +   SYE    KI+ +TG+ +V ++VN FL+AEE+NFSLFN+VN++NSEIERLE  I+  ++ IEKY+GQG+S+DTQRKK +R LEE+L+ T+ KA +YE RYQ A +TINQLK GI SIF+RIGA S +SV+EMLGNQGVTESNMMQYLGIIEQRT+EILQAYA SQ    +    +  S V         P  +    P+++D SSGEDSD E DERPLTR+EL+++T++
Sbjct:    6 RLSSKEDEPMQRVLRQRELVESMKHENEVLRLDLTREERDAKHSQSAGAASDIARLQEEAGRFMKKIEGEREKIAELDKQIIKYQELILDQKTRLGGVNAAQINNQLIQKQIKVLDNRLDKCLTKFNETIAHNKELRLKIDEYRRERIVFDVIYKKLERDLHEKKKEMTAIINDSKNAYQARDKSQSEMAALQQHAEKERAEFESEFKELGDLIKQQQVMLEQIRLKQFERTDENSVKASTMLEGERVGG--ESNPMSA------WAVGNKDKAMAPLS-QEKIHSYEEMLVKIQESTGIKDVQEIVNKFLEAEEQNFSLFNYVNDINSEIERLEHSISNMRSQIEKYRGQGMSSDTQRKKTVRDLEEKLTRTDKKAADYEARYQVAGRTINQLKNGIQSIFTRIGATS-TSVDEMLGNQGVTESNMMQYLGIIEQRTTEILQAYAASQIGLPSESNLQLPSVVPSDGLGKVAPSGV----PSYEDMSSGEDSDGEKDERPLTRQELEKRTVK 504          
BLAST of mRNA_C-linearis_contig74.15042.1 vs. uniprot
Match: A0A7S3K573_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K573_9STRA)

HSP 1 Score: 421 bits (1081), Expect = 2.870e-137
Identity = 272/539 (50.46%), Postives = 345/539 (64.01%), Query Frame = 1
Query:   79 IKSIRHGNELLKSDLAWEARESRFITNPSA--AAEIQRLQDQADIYAKKTEQDRRKIQELDRQIAATQARVLEQRQKMGGLNASQENNEMIAKQIRTLESRLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAIISDSNNAYHARDKAQSEMMALRQQAEKDRAEFDAEWKELGKLIAQDRKLRETLRQRQLDRSRDLRAEGECV-----------GD---------------GDEENRLMVCSSGEEWGA--------------GAKDRQQTT------LTFSQPEQSYEAAFNKIKGATGMTNVSDMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEKYKGQGVSTDTQRKKVLRGLEEQLSMTEGKADEYEGRYQTAMKTINQLKTGIHSIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYATSQQMTQAVETQEFTSPVEGGTADATVPLRLNVQPPTWDDFSSGEDSDQEDDERPLTREELKRKTLRGGG 1551
            I  I   NE LK  LA E R+SR     ++    E+QRLQ QA  Y +K E++R +I +LD +IA  Q  ++EQ+QKMGG+NAS+EN+ M+ KQI+ +E+RL KAL KFNE LA NK  R++ID  RRERVV+D IYKKLE ELH+KKKEMAAII D+  AY   DK+QSEM AL+ Q  K++ +F+ EWK LG+L+ Q+R+ RE LR +Q + +  +  E +             G+               G + N  M+ ++ E                    KD   T       L       SYE  F K+K  TG  ++ +++++F   E+KNFSLFN +NELNS+IE+ EL IAETK  IEKYKGQGVS+DTQRKK  R LEE+LS TE K DEYE R+Q A KTINQLKTGIHSIFSR+G  S +SVEEMLGNQGVTESNMMQYL +IEQRT+EILQAYA SQ +         T+ ++ G      P +++VQPPTWDDFSSG+D     DERPLTREEL+RKTLRG G
Sbjct:   29 IDLIEQENEELKQILARETRQSRMTQQMTSNQGGEMQRLQKQAANYLRKIEKERDQISQLDDKIAKAQQDIVEQKQKMGGINASRENHAMLTKQIKIMENRLAKALQKFNEQLAQNKQQRQKIDDYRRERVVYDGIYKKLEVELHQKKKEMAAIIEDAKLAYSKSDKSQSEMRALKSQVAKEKEDFEKEWKALGRLMEQERQEREQLRIKQCEEAARIAVERKAAYQQGLQNQAKRGENTRSATSTIQPNENIGKKNNNDMIDNTDEXXXXXXXXXXXXKLSSTMNKKDANPTNQSSNNKLLTRDEAISYEEIFQKLKQETGCQSMKELIDHFQDVEQKNFSLFNSINELNSDIEQCELAIAETKLEIEKYKGQGVSSDTQRKKFFRSLEERLSRTETKVDEYELRHQNAQKTINQLKTGIHSIFSRLGCAS-TSVEEMLGNQGVTESNMMQYLELIEQRTTEILQAYAHSQAVASGKLDLASTAALQQGIIQPPPP-KISVQPPTWDDFSSGDDXXXXXDERPLTREELQRKTLRGLG 565          
BLAST of mRNA_C-linearis_contig74.15042.1 vs. uniprot
Match: A0A7S4FCZ6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCZ6_CHRCT)

HSP 1 Score: 414 bits (1065), Expect = 2.710e-135
Identity = 249/520 (47.88%), Postives = 356/520 (68.46%), Query Frame = 1
Query:   34 FEDTSINRVKKQKEAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTEQDRRKIQELDRQIAATQARVLEQRQKMGGLNASQENNEMIAKQIRTLESRLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAIISDSNNAYHARDKAQSEMMALRQQAEKDRAEFDAEWKELGKLIAQDRKLRETLR-QRQLDRSRDLRAEGECVGDGDEENRLMVCSSGEEWGAGAKDRQQTTLTFSQPEQSYEAAFNKIKGATGMTNVSDMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEKYKGQGVSTDTQRKKVLRGLEEQLSMTEGKADEYEGRYQTAMKTINQLKTGIHSIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYATSQQMTQAVETQEFTSPVEGGTADATVPL-------------RLNVQPPTW--DDFSSGEDSDQEDDERPLTREELKRKTLRG 1545
            + D S   ++KQ+E I+ +++ N  LK +LA E + ++   + SA A+I +LQD  D Y KK EQ++R+I+ELD+Q+     ++ EQR+KMGG+NAS+EN++ I KQI  LE+RLDKAL K+NE+LA NK LRE ID LRRER+VFD IYKKLE+EL +KKKEMA II  SN AY ARD AQ+EM+AL+ QA+K++AEF++EWKELG +I QDRK+++ ++ +R+    ++ R E       +EE RL        WG  AKD+     +  +  QSYE AF KI+ ATG++++ ++V  F+ AE++NF+LFN+VNELN+E E+LE  I+E K+ I+KYKGQG++TD QRKK+L+ LE++L  TE KA +YE +Y+ AMKT+N LK GI SIF++IG  + ++++ +LGN+GVTE NMMQYLGIIEQRT+EILQ YA +Q      + +E     + G+A   V                +++QPPT   ++  S         +RP +R+ELK KT+RG
Sbjct:   39 YSDESQTVLRKQRETIEKLKNDNLQLKEELASERKHAKLFDSVSAQAQIAKLQDAGDTYTKKIEQEKRRIEELDKQMDIMHKKIWEQRKKMGGVNASRENSQAITKQIHVLENRLDKALKKYNEALAQNKKLRENIDNLRRERLVFDQIYKKLEKELADKKKEMARIIDISNRAYEARDNAQAEMVALKTQADKEQAEFESEWKELGTMIEQDRKMKDFMKKEREKLSMQEQRGEMSL----EEEQRLKKKVLKGSWGI-AKDKASIHASIEKV-QSYEEAFAKIQAATGISDIDELVTTFINAEDQNFALFNYVNELNTECEKLEEQISELKSEIDKYKGQGLNTDNQRKKILKDLEDRLQRTEAKAAQYEKKYEAAMKTVNALKVGIQSIFNKIGCNTPANMD-LLGNEGVTERNMMQYLGIIEQRTNEILQLYAAAQ-----AQARESAGEAQNGSATPAVANILGTGPQVPAGQNHISIQPPTTTEENLDSXXXXXXXXXDRPFSRDELKAKTIRG 546          
BLAST of mRNA_C-linearis_contig74.15042.1 vs. uniprot
Match: A0A0M0JE40_9EUKA (Flagellar outer dynein arm-docking complex protein 1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JE40_9EUKA)

HSP 1 Score: 411 bits (1056), Expect = 2.880e-134
Identity = 250/502 (49.80%), Postives = 346/502 (68.92%), Query Frame = 1
Query:   67 QKEAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTEQDRRKIQELDRQIAATQARVLEQRQKMGGLNASQENNEMIAKQIRTLESRLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAIISDSNNAYHARDKAQSEMMALRQQAEKDRAEFDAEWKELGKLIAQDRKLRETLRQRQLDRSRDLRAEGECVGDG--DEENRLMVCSSGEEWGAGAKDRQQTTLTFSQPEQSYEAAFNKIKGATGMTNVSDMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEKYKGQGVSTDTQRKKVLRGLEEQLSMTEGKADEYEGRYQTAMKTINQLKTGIHSIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYATSQQMTQAVETQEFTSPVEGGTADA--TVPLRLN---VQPPTWDD--FSSGEDSDQEDDERPLTREELKRKTLRG 1545
            ++  I  ++  NE LK +L+ E R ++   + SA A+I +LQD  D+Y +K E ++R+IQELD+Q+     ++ +QRQKMGG+NAS+ENN+ IAKQI+ LE+RLDKAL ++NE+LA NK LRE ID LRRER+V+D IYKKLE+EL EKKKEMA II  SN AY ARD AQSEM AL+ QA+K++++F+AEWKELGK+I QDRK+++ ++     + R+  ++ E  GD   ++E  L        WG  AKD+     +  +  QSYE AF KI+ ATG+ ++ ++V  F+ AE++NF+LFN+VNELN E E+LE  IA+ K  IEKYKGQG++TD QRKK+L+ LE++L  TE KA++YE +Y+ AMKT+N LK GI SIF++IG  + +++E MLGN+GVTE+NMMQYLGIIEQRT+EILQ YA +Q     ++ Q    P           VP   N   +Q PT  D  + S E       +RP +R+ELK KT+RG
Sbjct:   32 ERATIDKLKDDNEQLKEELSLERRHAKVYDSVSAQAQIAKLQDTGDMYTRKIELEKRRIQELDKQMEVMHKKIWDQRQKMGGINASRENNQAIAKQIQILENRLDKALKRYNEALANNKRLRENIDNLRRERLVYDQIYKKLEKELAEKKKEMARIIEISNKAYEARDAAQSEMQALKAQADKEQSDFEAEWKELGKMIEQDRKMKDFMK-----KEREKLSQQEHRGDMTVEQEQSLKKKVLRGNWGI-AKDKASIHASMEKV-QSYEEAFAKIQAATGIEDIDELVTTFINAEDQNFALFNYVNELNGECEKLEEQIADIKAEIEKYKGQGLNTDNQRKKILKDLEDRLQRTEAKAEQYEKKYEAAMKTVNALKVGIQSIFNKIGCNTPANLE-MLGNEGVTEANMMQYLGIIEQRTNEILQLYAATQAREGVLDAQGNPVPPVSSILGQGPQVPAGRNAISIQAPTTTDEAYDSEEXXXXXXXDRPYSRDELKAKTMRG 525          
BLAST of mRNA_C-linearis_contig74.15042.1 vs. uniprot
Match: A0A7S0SDG4_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SDG4_9CHLO)

HSP 1 Score: 409 bits (1050), Expect = 2.680e-133
Identity = 242/528 (45.83%), Postives = 356/528 (67.42%), Query Frame = 1
Query:   19 GKVSKFEDTSINRVKKQKEAIKSIRHGNELLKSDLAWEARESRFITNPSAAAEIQRLQDQADIYAKKTEQDRRKIQELDRQIAATQARVLEQRQKMGGLNASQENNEMIAKQIRTLESRLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAIISDSNNAYHARDKAQSEMMALRQQAEKDRAEFDAEWKELGKLIAQDRKLRETLRQRQLDRSR--DLRAEGECVGDGDEENRLMVCSSGEEWGAGAKDRQQTTLTFSQPEQSYEAAFNKIKGATGMTNVSDMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEKYKGQGVSTDTQRKKVLRGLEEQLSMTEGKADEYEGRYQTAMKTINQLKTGIHSIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYATSQQMTQAVETQEFTSPVEG--GTADATVPLR---LNVQPP-TWDDFSSGEDSDQEDDERPLTREELKRKTLR--------GGGA 1554
            G    + + S N +++Q++AI+ ++  N  LK++LA E +++     P+  AEI +LQD AD+Y +K E +RR++++LD  +  +  ++LEQR+ MGG++A++EN+  + KQ++ LE++LDKALV+FNE+L+ NK+LRE ID LRRERV FD++Y+K+ERELHEKKKEMA II  SN AY ARD+AQ+E+ ALR QA+K+ A F+AEW+ELGK++  DRK++E   + +L  +        GE   + + + R  V      W   AKD+ QT +   + E SYE AFNKIK ATG+T++ D+V  F+ AE++NFSLFNFVNELN E E+LE  + E    IEK++G G + D  RKK+L+ LE +L  T+ K D++E R+  AM+T+N LK GI SI+++IG   N++  E+LG+QGV ESNM+ YLG+IEQR +E+LQAYA  Q  + A  +      ++   G      P     +N+ PP T D+++S E+S++E D+RPLTR+EL+ KTLR        GGGA
Sbjct:   28 GNRKSYSEDSQNHIRRQRQAIEKLKEDNASLKTELAMELKDAALAPPPNVQAEITKLQDTADLYTRKIEIERRRVEDLDHHLQLSDLKILEQRRAMGGIHAAKENSHQVTKQVKVLENKLDKALVQFNEALSSNKSLREEIDNLRRERVAFDNVYRKMERELHEKKKEMANIIEISNIAYEARDQAQNEIAALRAQADKESASFEAEWRELGKILESDRKVKEMNMRNKLKMAELGGTGQYGEMSMEDEAKLRKKVIKGN--WHL-AKDKTQTAMAAERVE-SYEEAFNKIKQATGITDIDDLVTTFIAAEDQNFSLFNFVNELNQEQEKLEEQMTELGGEIEKFRGAGAADDGVRKKILKDLEGRLERTDAKTDQFELRFLAAMRTVNALKAGITSIYNKIGCN-NAASRELLGDQGVNESNMLSYLGVIEQRANEVLQAYAAQQMASAAANSDAGVDGIKAILGATGPMTPANAGGVNIDPPSTADEYASDEESEEEIDDRPLTRDELQAKTLRALNKRESKGGGA 550          
BLAST of mRNA_C-linearis_contig74.15042.1 vs. uniprot
Match: A0A7S3HPE5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPE5_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 1.430e-131
Identity = 234/428 (54.67%), Postives = 314/428 (73.36%), Query Frame = 1
Query:  259 QIAATQARVLEQRQKMGGLNASQENNEMIAKQIRTLESRLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAIISDSNNAYHARDKAQSEMMALRQQAEKDRAEFDAEWKELGKLIAQDRKLRETLRQRQLDRSRDLRAEGECVGDGDEENRLMVCSSGEEWGAGAKDRQQTTLTFSQPEQSYEAAFNKIKGATGMTNVSDMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEKYKGQGVSTDTQRKKVLRGLEEQLSMTEGKADEYEGRYQTAMKTINQLKTGIHSIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYATSQQMTQAVETQEFTSPVEGGTADATVPLRLNVQPPTWDDFSSGEDSDQEDDERPLTREELKRKTLR 1542
            QI   Q ++LEQ+ ++GG+NA+Q NN++I KQI+ L++RLDK L+K+NE++A NK LR++ID  RRER+VFD IYKK+ER+LHEKKKEM AII+DS NAY ARDK+Q+EM  L+ QAEK+RA+F+ E+KELG LI Q + + E LR +Q +R+ D       V    EE    + SS   WG G KD+    L+  +   SYE    K++ +TG+ +++++VN FL+AEE+NFSLFN+VN++NSEIERLE  I+  +N IEKYKGQ  S++TQRKK +R LE++L+ T+ KA++YEGRY  A++TINQLK GI SIF+RIGA S +SV+EMLGNQGVTESNMMQYLGIIEQRT+EILQAYA SQ       T +  S V        +P  +    P+++D SSGEDS+ E DERPLTR+EL+++ LR
Sbjct:    1 QIVTYQEQILEQKTRLGGVNAAQVNNKLIQKQIKVLDNRLDKCLLKYNETIASNKVLRQKIDEYRRERIVFDVIYKKIERDLHEKKKEMTAIINDSKNAYQARDKSQAEMRNLQSQAEKERADFETEFKELGDLIKQQQIMLEQLRLKQFERTNDENVVTTSVS---EERSGEMASSMANWGNGNKDKNLAPLS-QEKIHSYEEMLLKVQDSTGIYDINEIVNKFLEAEEQNFSLFNYVNDVNSEIERLEHSISTMRNQIEKYKGQDASSNTQRKKTVRDLEDKLTRTDKKAEDYEGRYNLAVRTINQLKNGIQSIFTRIGATS-ASVDEMLGNQGVTESNMMQYLGIIEQRTTEILQAYAASQIGLPNEHTLQLPSVVPAEGTGKVLPTTI----PSYEDMSSGEDSEGEKDERPLTRQELEKRALR 419          
BLAST of mRNA_C-linearis_contig74.15042.1 vs. uniprot
Match: A0A1Y1IDM8_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDM8_KLENI)

HSP 1 Score: 396 bits (1017), Expect = 5.320e-128
Identity = 249/495 (50.30%), Postives = 345/495 (69.70%), Query Frame = 1
Query:  112 KSDLAWE---ARESRFITNP---SAAAEIQRLQDQADIYAKKTEQDRRKIQELDRQIAATQARVLEQRQKMGGLNASQENNEMIAKQIRTLESRLDKALVKFNESLAMNKNLRERIDTLRRERVVFDSIYKKLERELHEKKKEMAAIISDSNNAYHARDKAQSEMMALRQQAEKDRAEFDAEWKELGKLIAQDRKLRETLRQRQLDRSRDLRAEGECVGDGDEENRLMVCSSGEEWGAGAKDRQQTTLTFSQPEQSYEAAFNKIKGATGMTNVSDMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEKYKGQGVSTDTQRKKVLRGLEEQLSMTEGKADEYEGRYQTAMKTINQLKTGIHSIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYATSQQ-------MTQAVETQEFTSPVEGGTADATVPLRLNVQPP-TWDDFSSGEDSDQED-DERPLTREELKRKTLRGGG 1551
            KS LA E    +E+RF +     SA A+I +LQDQAD++ +K E ++R++ ELD+QI    A+++EQR+KMGG+NA++ENN  I+KQI+ LE+RLDKALVK+NE++A NK LRE ID LRRER+VFD IYKKLEREL EKK+EMA II  SN AY +RD A +EM AL+ QA+K++A F+AEWKELGKLI  DR++++ ++ R+     +   +G+   +  EE +L        W   AKD+    ++  +  QSY  AF KI+ ATG+T++ ++V  F+ AE++NFSLFN+VNELN EIE+LE  IA+ K  IEKYKGQGV+TD QRKK+L+ LE++L  TE KA+ YEG++  A KT+N LK GI +IF++IG  +  +V+E+LG+ GVTESNMMQYLGIIEQRT+EILQ YA SQ        +   + T    S +  G         + ++PP T DD  +  +SD+E+ +ERP+TR+EL+ KTL+  G
Sbjct:   57 KSQLAKEDSHQQENRFTSTAATHSATAQIAKLQDQADMFTRKIELEKRRVAELDKQIQQMNAKIMEQRKKMGGVNAAKENNAQISKQIKILENRLDKALVKYNEAVAHNKALRENIDNLRRERLVFDQIYKKLERELQEKKREMAHIIEISNLAYESRDAAVNEMAALKAQADKEQAAFEAEWKELGKLIEHDRRMKDMMKSREKTAPPEPEKKGDMSVE--EEQKLKKKVIRGNWNI-AKDKVAQAVSLEKV-QSYGEAFAKIQEATGITDIDELVTTFINAEDQNFSLFNYVNELNQEIEKLEEQIADIKAEIEKYKGQGVNTDNQRKKILKELEDRLVRTEAKAEVYEGKHAVAQKTMNALKVGIQNIFTKIGCAT-PAVKELLGDAGVTESNMMQYLGIIEQRTNEILQLYAASQSGGHGGGGLDGVLGT--IGSILGQGPQTPAGATTIAIEPPSTTDDMQTESESDEEEMEERPMTRDELRVKTLKSLG 544          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15042.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD26_ECTSI8.750e-31392.46Flagellar outer dynein arm-docking complex n=1 Tax... [more]
A0A835YL73_9STRA3.630e-19162.78Flagellar outer dynein arm-docking complex n=1 Tax... [more]
F0XWP0_AURAN3.240e-16859.72Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A482S1B7_9ARCH2.450e-15052.83Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3K573_9STRA2.870e-13750.46Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4FCZ6_CHRCT2.710e-13547.88Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A0M0JE40_9EUKA2.880e-13449.80Flagellar outer dynein arm-docking complex protein... [more]
A0A7S0SDG4_9CHLO2.680e-13345.83Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A7S3HPE5_9STRA1.430e-13154.67Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A1Y1IDM8_KLENI5.320e-12850.30Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:676474..683045 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score875.2
Seed ortholog evalue1.7e-251
Seed eggNOG ortholog2880.D8LD26
Preferred nameDC2
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001578,GO:0003341,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032838,GO:0034622,GO:0035082,GO:0036158,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0060271,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
EggNOG free text desc.outer dynein arm assembly
EggNOG OGs28K4A@1,2QSIU@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons12
Model size1710
Cds size1710
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15042.1prot_C-linearis_contig74.15042.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig74 676474..683045 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930417.692754-CDS-C-linearis_contig74:676473..6765441622930417.692754-CDS-C-linearis_contig74:676473..676544Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 676474..676544 +
1690881059.2982044-CDS-C-linearis_contig74:676473..6765441690881059.2982044-CDS-C-linearis_contig74:676473..676544Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 676474..676544 +
1622930417.7118275-CDS-C-linearis_contig74:677099..6772561622930417.7118275-CDS-C-linearis_contig74:677099..677256Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 677100..677256 +
1690881059.3103266-CDS-C-linearis_contig74:677099..6772561690881059.3103266-CDS-C-linearis_contig74:677099..677256Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 677100..677256 +
1622930417.7314656-CDS-C-linearis_contig74:677671..6778271622930417.7314656-CDS-C-linearis_contig74:677671..677827Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 677672..677827 +
1690881059.3209038-CDS-C-linearis_contig74:677671..6778271690881059.3209038-CDS-C-linearis_contig74:677671..677827Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 677672..677827 +
1622930417.751901-CDS-C-linearis_contig74:678052..6781871622930417.751901-CDS-C-linearis_contig74:678052..678187Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 678053..678187 +
1690881059.3339865-CDS-C-linearis_contig74:678052..6781871690881059.3339865-CDS-C-linearis_contig74:678052..678187Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 678053..678187 +
1622930417.770034-CDS-C-linearis_contig74:678511..6785981622930417.770034-CDS-C-linearis_contig74:678511..678598Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 678512..678598 +
1690881059.3489304-CDS-C-linearis_contig74:678511..6785981690881059.3489304-CDS-C-linearis_contig74:678511..678598Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 678512..678598 +
1622930417.7855062-CDS-C-linearis_contig74:678810..6789321622930417.7855062-CDS-C-linearis_contig74:678810..678932Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 678811..678932 +
1690881059.3611016-CDS-C-linearis_contig74:678810..6789321690881059.3611016-CDS-C-linearis_contig74:678810..678932Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 678811..678932 +
1622930417.8010235-CDS-C-linearis_contig74:679464..6796181622930417.8010235-CDS-C-linearis_contig74:679464..679618Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 679465..679618 +
1690881059.3715427-CDS-C-linearis_contig74:679464..6796181690881059.3715427-CDS-C-linearis_contig74:679464..679618Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 679465..679618 +
1622930417.8164258-CDS-C-linearis_contig74:680315..6804221622930417.8164258-CDS-C-linearis_contig74:680315..680422Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 680316..680422 +
1690881059.3827734-CDS-C-linearis_contig74:680315..6804221690881059.3827734-CDS-C-linearis_contig74:680315..680422Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 680316..680422 +
1622930417.839036-CDS-C-linearis_contig74:680990..6811261622930417.839036-CDS-C-linearis_contig74:680990..681126Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 680991..681126 +
1690881059.404927-CDS-C-linearis_contig74:680990..6811261690881059.404927-CDS-C-linearis_contig74:680990..681126Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 680991..681126 +
1622930417.8590739-CDS-C-linearis_contig74:681550..6816451622930417.8590739-CDS-C-linearis_contig74:681550..681645Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 681551..681645 +
1690881059.421153-CDS-C-linearis_contig74:681550..6816451690881059.421153-CDS-C-linearis_contig74:681550..681645Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 681551..681645 +
1622930417.8756752-CDS-C-linearis_contig74:682042..6821991622930417.8756752-CDS-C-linearis_contig74:682042..682199Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 682043..682199 +
1690881059.429775-CDS-C-linearis_contig74:682042..6821991690881059.429775-CDS-C-linearis_contig74:682042..682199Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 682043..682199 +
1622930417.893054-CDS-C-linearis_contig74:682712..6830451622930417.893054-CDS-C-linearis_contig74:682712..683045Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 682713..683045 +
1690881059.4377203-CDS-C-linearis_contig74:682712..6830451690881059.4377203-CDS-C-linearis_contig74:682712..683045Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 682713..683045 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig74.15042.1

>prot_C-linearis_contig74.15042.1 ID=prot_C-linearis_contig74.15042.1|Name=mRNA_C-linearis_contig74.15042.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=570bp
MSHNAHGKVSKFEDTSINRVKKQKEAIKSIRHGNELLKSDLAWEARESRF
ITNPSAAAEIQRLQDQADIYAKKTEQDRRKIQELDRQIAATQARVLEQRQ
KMGGLNASQENNEMIAKQIRTLESRLDKALVKFNESLAMNKNLRERIDTL
RRERVVFDSIYKKLERELHEKKKEMAAIISDSNNAYHARDKAQSEMMALR
QQAEKDRAEFDAEWKELGKLIAQDRKLRETLRQRQLDRSRDLRAEGECVG
DGDEENRLMVCSSGEEWGAGAKDRQQTTLTFSQPEQSYEAAFNKIKGATG
MTNVSDMVNNFLQAEEKNFSLFNFVNELNSEIERLELMIAETKNSIEKYK
GQGVSTDTQRKKVLRGLEEQLSMTEGKADEYEGRYQTAMKTINQLKTGIH
SIFSRIGAGSNSSVEEMLGNQGVTESNMMQYLGIIEQRTSEILQAYATSQ
QMTQAVETQEFTSPVEGGTADATVPLRLNVQPPTWDDFSSGEDSDQEDDE
RPLTREELKRKTLRGGGAASGANNGGAVGGAASGYPGGAKGGAGGAAGNK
YKDGKVREKRELDALRGQG*
back to top

mRNA from alignment at C-linearis_contig74:676474..683045+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig74.15042.1 ID=mRNA_C-linearis_contig74.15042.1|Name=mRNA_C-linearis_contig74.15042.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6572bp|location=Sequence derived from alignment at C-linearis_contig74:676474..683045+ (Chordaria linearis ClinC8C monoicous)
ATGTCGCACAATGCTCACGGAAAAGTGTCCAAGTTCGAAGACACGTCGAT CAACCGCGTCAAGAAGCAAAAGTGAGTCTGATGCTGATATGATATGATGC TCAAATTAGTGCTTGAACATGTTCTTGGAGGGCACGAAAGCCCTCATCTG TGTAGGGGTGATCACGTCATGGATTACAATGGCTGCCATATACTTTTCCC GTGCCTACTCGCTTTGCGCTTTGAGGCACGGTCGATGCTCGCCAGTGCCG CATGTCTGGGTTGCTGTGGACATGATTTGGACGCGGGCAAGGTTACGACA CGAGACACGAAGACGCGAGAGAGTGGAATACTTGCGAAAGAGCGATATTA CTTGCCTAGCGTGTTGGCGAAATTTCGCCAACTACGTCATGAATAGCCAC CTGTGGCCTGGCACGTTTTCCTTGATGCCGTTCGGAAAGACGGCTCTGCC GCATACATACAACATTTCGTGCATAGAGATGTTGGAACTCCGGAAATACA TCATCCCGCCATCCACTCGACGGTGAATATCCCACAACGATATGTACAGT TCGAAGCATCGAATCAGTTACCCGAACGCAACCGCTCTCCGTGAGCTGAG TTTTCTGCTTCTACATGTACATGCAGGGAGGCCATCAAGAGCATTCGCCA CGGAAACGAGCTGCTCAAATCTGACCTGGCTTGGGAGGCTCGCGAGTCTC GGTTCATCACCAACCCTTCCGCCGCAGCAGAGATCCAAAGGTTGCAGGAC CAGGCCGACATATACGCCAAGAAAACGGAGCAGGTGTGAGTTTTGCTGAA TGAACTGCACAAAAAAGTTGTGCAAACGGATAATCTTAATCTTATTACTA AAAACGGAGTGGTTCTCTAGGCAAATGTATCCCCCATCCGGTCTCTTTTT CTTTCAGTACGATTGAGTGCCAACGTACGTACGTGTAAGAAGCGTCAGTG TCTTTAGTGCCAAGCGCTGGTGCTAGTGCTGGTGCCACTCTTCCTTTTAT TGCACGCAATTTGGCACTTCAATGTTCGTCGCGCCCTCGTACCCCAACTC CCGCTGCTAACCTTCGGTGCAACCCGAACGGTAACCTCACCGAGTCTACG CTACTAATAACAACTGTGATGGCAATGTCCAAAACCAAAAGAAAACTTCT CTCAGCAAATAAGGAACATGTTGGCTTGATCTTGATGTACCTTCCCAGGA TCGGCGCAAGATCCAAGAGCTAGACCGCCAGATAGCGGCCACGCAAGCGA GGGTGCTGGAGCAGCGGCAGAAGATGGGCGGGCTGAACGCATCTCAAGAG AACAACGAGATGATCGCCAAGCAGATACGAACACTGGAAAGCAGGCTTGA TAAGGTAATCAAGCAGCGACAACAAAATGGTGGCTTCCTCCAACTAACAC ATTTCATGGCGCCCTGAGATCGAAACCCCAACACAAGGCGCCCAAACCCA ATGAACCAGAACCACAGACATCCGGCGAAAGTCTATTCAAACATCGGGAA AGCTTAGAACCAAGCGGGCGTTTACCAGATTCTCAAATACGCGGGCTTGA TGTTGACGGTCGCCATATTTGCTGCACAGGCGCTAGTGAAGTTCAATGAG TCTCTGGCGATGAACAAGAACCTCCGGGAGCGCATTGACACCCTTCGAAG AGAAAGGGTGGTGTTTGACAGCATCTACAAGAAGCTGGAGAGAGAACTGC ACGAAAAGAAGAAGGTATGGTAATGGGAGGCGGGCGGATGCTGGTGAAGA ACCATCATTCGATGATGTCCTTTGCATTTCATGGACAGTTTCTGCTTCGG TATGGAGCACCGACAGCGCACTGCGCTTTTCTGCCAACGCTCCCATGCAG CCGGTCAGAAAAGGGACGAATATGTATGCCTCAAGTACGATATTCCAGAC CCTCTGAACGAAGCCGCTCAGTGAGGTAGCTGCCACATAAAGCGATTACT TTGGCCTTCCGTTCCTTTCGACACACGCATACTACGTCTATCTCACACCG ATATTTGCAACATGCGTCCGTGCCCAATTCCTGAGCAGGAGATGGCGGCA ATAATCAGCGACAGCAACAACGCCTACCACGCGAGAGACAAGGCCCAGAG CGAAATGATGGCATTGCGACAGCAGGTATATTTCATTTTTCAAGTCTAGA TCTCTATATCTCTAGACTTCTAGGATGCAGGGCGCTACCACAGACCGCTC TTGGATCTATTTGTCGCCATGTATGAGTGGTTCACTGGTTCGCTGCTGTG TGTTACCATAGCTCTTCCGTGTCAGGCTAGCTAGCCATGGAGCTGACAAG CGAGTCTGCACGACCCGACTATTTCCCCCTAATTTAGGCGGAGAAGGATC GTGCTGAATTTGACGCGGAGTGGAAAGAATTGGGCAAGCTCATCGCTCAG GACAGGAAGCTCAGGGAGACGTTGCGACAGCGACAGCTAGACCGGAGCAG AGACCTCAGGTATGTTCCTGTTTGGGCGTGTCGCGGGAATACGCGCAGTC TTCTCCTTGCGCTTGCTTGAGAGCATGGCGAGGAGGAACGGTAAGTTTTT GGGGGGAAAGGGGGCCATAAAATGCAAGACAACGACCATTGTGATTCCAC TCATTTCGGGTGATGTAAATTGTACCGTTTCAAGAATTTTCGTTGTTCTT TAGTTGACGCGCGCACGAGCGAGGCCGCAATCTTCAGCCACCCTGAATGC GACACTTGAGGTAAAAAAAAAAAAAAACTAGACTTGGAGTGCGGGAATAT TTTAGAGACCAAGAACGAGCTCCAAACCATGTTCATTTGTTATTTTGTTA TTTTCTCCTGACCCGGCGTCGAGAAAAGCAGTACAGGCCACGCTTCACAC ACCATCCCCACGTCGGGATGATCTGGCTGAGCCATCCGGTCCTTTCCCCC CCTCCCGCCCTCCTTCATTTTCATGGTACTTCGTCACCGTACGTCGGATG TGGTGGACGGACATGGGACATGGGACATGGACCTACGCCAGGGCCGAGGG GGAGTGTGTCGGGGATGGGGACGAAGAGAACAGGTTGATGGTGTGCAGCA GCGGGGAGGAGTGGGGCGCAGGCGCGAAGGACCGCCAGCAGACAACCTTG ACCTTCAGCCAGCCAGAACAGTCGTACGAGGCGGCCTTCAACAAGGTATG GTTTAGTCTGGGGTGGTCTTGTCTACTGGCACGTGCGTGATTCTCCATCT TGTCGGGCACATGCTGCCTTGCAGCGCAGGGATCATCTGTGCGGCGCATC CGGGGTGTAGAGAAGCCACATATTTGTACCTATCTCGTGAAGTAGAGGCT CAAGCTCGGAGGGCGATATTCATCCAAAAGCCCACCACGATCTCCGAGAG TGATCTCCGAACTCTCGTTGTCGCACTCCTCGGAGTTTTACGTTTATTGA CCGCTGCTACCCAGAGAAGCTCAGAAAATCTCAGGTCGATGCAATTTGCT TTACTTGCAGAAATAGAATGTAAATGTTCTCTCGGCAATATTGCACATGT TCGCATTGCTTAAGGCCGTACAGGCCAGAAACTCGCGAAGAAGAAAACTA AAAAAGCTCAAAAATGCCATGCAGAAGCAGTCAACTACATCGATCCGCTC GTGTCAAACACGTTCAGAACATTCGTAAATCCGGTGATGCCGCTGGTCGA TTCATTGTTCCCTTCCCTTTCGTGCCGTGCCGTGCCGTGCCGTGCCGTGC CGTGCCGTGCCGTGCCGTGCCGTGCCGTGCCGTGCCGTGCCGCGCCGTGC CGGGCCGTGCCGTGCCGTGCCGGGCCGTGCCGTGCCGGGCCGTGCCGTAC ATGCCGTACCGTGCCGCGGCATGACATGACATGACATGACAGATCAAAGG GGCAACCGGGATGACCAACGTGTCGGACATGGTGAACAACTTCCTCCAGG CCGAAGAGAAGAACTTCAGCCTCTTCAACTTCGTCAACGAGCTCAACAGG TGCATTCACGAGATCACAGCGCACGAGGCTCCGCACCTACTACGTTGTGT GGATCGGATACATATGTTGAGTTTTTTTTCTTATTTTTTCTTATTTTTTC CGACCAAGCGGTCTACTCTGATAAGTTCCCCTCGCACCTACGTCCACCAC CTGTGGTCATTCACCCTTTCCTTTTTATCTTTCTATCACCTACGACTCGG CGTCGATCCTCAAGCACAGAAAGTCGACAAGTCTGAGCCAAGCTATTTAT GCTCTGTCTGCAATCATCCTACTGTAGTATATTTGGACACGAAGCCTTGC GCATGTAAGTACAGTTTCTCTGCTTGTACGGCATCATGGCTTTTGCAATA GACCCGCAAGGGTTCGAGGCCATGGGAGCATACATCAACCATGACGCCAA AACTTGCTTTCAACACCCTGACCCTCCCCGACCAGGACGCGGTCTGTTCA CCCACCAAGAGTCATGTAGGGCCCAATCGGTCTGTTTGCTCATCCCTCAT CCCATGTCGCGGACGCACCTCTTCCTCCACCTCTGTACGCACACAACAAA AACAACAACAACAACAGCGAGATCGAACGGTTGGAGCTTATGATAGCGGA GACCAAGAACAGCATCGAGAAGTACAAGGGGCAAGGAGTCAGCACAGACA CGCAGAGGAAGAAGGTGTTGAGGGGGCTGGAGGAGCAGCTCTCTATGACG GAGGTGACTTTTCTGCATTATTTCCCCATGGTGCATGCACGTTGAAGTGC GAATGTTGCCGTGTCTTGGTTCCGCTTGCACCGCCTACAAGCCGTGCAGC AACCCTTGGTGCTAGTACTGCTGTACTAGCAGCCCACATTGTTTTCCTCC AAGACGCAAAGGATAACCTTGAGCGTGTACTTTTTGGTTGATAAATTAGT GCACCACGCCCCCAGCCCTAGCAAACAACCTTCTGCGTAGCTTTGAGAGC TGTTGACTACCTATTGTACGAACGCGGGTTACTCTCAACTTCGAAGTACA TTATACTCGGAAGTAGCGTCAACGACGAACAAAGACCGCCAACTGCCGTC GCTTCACGCTGCTCTCGCTTTCTTTGCTCGGTATGGCGTGGCGTGGTTGG GTACTATGCTTGAATTATTTTGCTCAGGGTAAGGCTGACGAGTACGAGGG CCGGTACCAAACGGCGATGAAGACCATCAACCAGCTCAAGACCGGTATCC ACAGCATCTTCAGCAGAATTGGGTGAGCCAAGTGAAGGAAAGCTTGCTAA AGCTACAGTCTACAGGAAACCCGTTCGGCCGTGCATTGTCGGCGCGCTAT GTAGACAGGAAGGCATCGTCTTTGGGTGGTGGGATGCTCTGATGTTTGTT TCTCCCTGGAGAGTTTTGTGTTTTCGTATTTTCTACTCTGGGTATGTCGA CTGCGTGGTGCGACATTTCGGTTTCGAAGTGCGAAACCAACCAAAACGAA ACCGCCAGCTCTCCTTTTCCCTTTCCCGTTGGTTGTTCAATAGACTGCCG TCATCCGAGATCGTCTTGGCTCACAGGAGTCCCGCGGTGGCAGAACTGCA TCCCGTATACCTTCCTCACGCTGTGGCCAACGCACCGCTCCGAAATCTAA ACACTCAAAATACCTGAAGCGCGGGTAGCAACTCGTCCGTAGAGGAGATG CTGGGCAACCAAGGGGTGACGGAGTCGAACATGATGCAGTACCTTGGGAT CATCGAGCAGAGGACGAGCGAGATACTGCAGGCATACGCGACATCGCAGC AGATGACGCAAGCTGTAGAAACCCAGGTAAAAACACCGGATTTCTTTGCC ACACACTCGAGTAACCTGCTTACCAAATATCGTTTCAAGACACTTATTTG CTGCTGTCACGTTACGTTACGTTGGCGGGTAGTTTCGCCATTTTTGTAAC CGCAACGTACCCGTGAGAGGTATCTCTCTGCGCACACGGGTACACACACA CGGAGAGCGTTCCACCTACTCGACTATGCTGCATTGGCAGGCACCAGGTT TTCACCCCAACCCTCAACGAGGGCTTGAAAGCGATGAGGCTCTCCCCGAA GGACGCGCGGTAGGCCATCCGATCAACGGTGCATGCATGCCCGCCCCGAC TAGGGTGTTCGAGGGGATATTCATTTTCTCAACTTACTCGTGATACCCTC TACCCCGACCTCCTCTCTCTCTCTCTCTCTCTCTCTCTTTGCTACCTTCT CCGAAGGGTCTATCTAACCCAGGCAACCGAATATCGCCCTCCCCACCCGC CCACGTACCCACTCTTTTACCCATGCTCATGCCCGACAGGAATTCACGTC TCCCGTGGAAGGAGGAACAGCCGACGCCACTGTGCCGCTGCGTCTCAACG TCCAGCCGCCCACCTGGGACGACTTCAGCTCGGGCGAGGACTCGGACCAG GAGGATGACGAGAGGCCCTTGACCCGCGAGGAGCTCAAGCGCAAGACGCT CAGAGGGGGCGGTGCGGCAAGCGGTGCCAACAACGGTGGGGCAGTCGGTG GGGCGGCAAGCGGGTACCCGGGAGGAGCAAAGGGGGGGGCAGGGGGCGCA GCAGGAAACAAGTACAAAGACGGGAAGGTGAGGGAGAAGCGAGAGTTGGA CGCTTTGAGAGGTCAAGGGTAA
back to top

Coding sequence (CDS) from alignment at C-linearis_contig74:676474..683045+

>mRNA_C-linearis_contig74.15042.1 ID=mRNA_C-linearis_contig74.15042.1|Name=mRNA_C-linearis_contig74.15042.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3420bp|location=Sequence derived from alignment at C-linearis_contig74:676474..683045+ (Chordaria linearis ClinC8C monoicous)
ATGTCGCACAATGCTCACGGAAAAGTGTCCAAGTTCGAAGACACGTCGAT
CAACCGCGTCAAGAAGCAAAAATGTCGCACAATGCTCACGGAAAAGTGTC
CAAGTTCGAAGACACGTCGATCAACCGCGTCAAGAAGCAAAAGGAGGCCA
TCAAGAGCATTCGCCACGGAAACGAGCTGCTCAAATCTGACCTGGCTTGG
GAGGCTCGCGAGTCTCGGTTCATCACCAACCCTTCCGCCGCAGCAGAGAT
CCAAAGGTTGCAGGACCAGGCCGACATATACGCCAAGAAAACGGAGCAGG
GAGGCCATCAAGAGCATTCGCCACGGAAACGAGCTGCTCAAATCTGACCT
GGCTTGGGAGGCTCGCGAGTCTCGGTTCATCACCAACCCTTCCGCCGCAG
CAGAGATCCAAAGGTTGCAGGACCAGGCCGACATATACGCCAAGAAAACG
GAGCAGGATCGGCGCAAGATCCAAGAGCTAGACCGCCAGATAGCGGCCAC
GCAAGCGAGGGTGCTGGAGCAGCGGCAGAAGATGGGCGGGCTGAACGCAT
CTCAAGAGAACAACGAGATGATCGCCAAGCAGATACGAACACTGGAAAGC
AGGCTTGATAAGGATCGGCGCAAGATCCAAGAGCTAGACCGCCAGATAGC
GGCCACGCAAGCGAGGGTGCTGGAGCAGCGGCAGAAGATGGGCGGGCTGA
ACGCATCTCAAGAGAACAACGAGATGATCGCCAAGCAGATACGAACACTG
GAAAGCAGGCTTGATAAGGCGCTAGTGAAGTTCAATGAGTCTCTGGCGAT
GAACAAGAACCTCCGGGAGCGCATTGACACCCTTCGAAGAGAAAGGGTGG
TGTTTGACAGCATCTACAAGAAGCTGGAGAGAGAACTGCACGAAAAGAAG
AAGGCGCTAGTGAAGTTCAATGAGTCTCTGGCGATGAACAAGAACCTCCG
GGAGCGCATTGACACCCTTCGAAGAGAAAGGGTGGTGTTTGACAGCATCT
ACAAGAAGCTGGAGAGAGAACTGCACGAAAAGAAGAAGGAGATGGCGGCA
ATAATCAGCGACAGCAACAACGCCTACCACGCGAGAGACAAGGCCCAGAG
CGAAATGATGGCATTGCGACAGCAGGAGATGGCGGCAATAATCAGCGACA
GCAACAACGCCTACCACGCGAGAGACAAGGCCCAGAGCGAAATGATGGCA
TTGCGACAGCAGGCGGAGAAGGATCGTGCTGAATTTGACGCGGAGTGGAA
AGAATTGGGCAAGCTCATCGCTCAGGACAGGAAGCTCAGGGAGACGTTGC
GACAGCGACAGCTAGACCGGAGCAGAGACCTCAGGCGGAGAAGGATCGTG
CTGAATTTGACGCGGAGTGGAAAGAATTGGGCAAGCTCATCGCTCAGGAC
AGGAAGCTCAGGGAGACGTTGCGACAGCGACAGCTAGACCGGAGCAGAGA
CCTCAGGGCCGAGGGGGAGTGTGTCGGGGATGGGGACGAAGAGAACAGGT
TGATGGTGTGCAGCAGCGGGGAGGAGTGGGGCGCAGGCGCGAAGGACCGC
CAGCAGACAACCTTGACCTTCAGCCAGCCAGAACAGTCGTACGAGGCGGC
CTTCAACAAGGGCCGAGGGGGAGTGTGTCGGGGATGGGGACGAAGAGAAC
AGGTTGATGGTGTGCAGCAGCGGGGAGGAGTGGGGCGCAGGCGCGAAGGA
CCGCCAGCAGACAACCTTGACCTTCAGCCAGCCAGAACAGTCGTACGAGG
CGGCCTTCAACAAGATCAAAGGGGCAACCGGGATGACCAACGTGTCGGAC
ATGGTGAACAACTTCCTCCAGGCCGAAGAGAAGAACTTCAGCCTCTTCAA
CTTCGTCAACGAGCTCAACAGATCAAAGGGGCAACCGGGATGACCAACGT
GTCGGACATGGTGAACAACTTCCTCCAGGCCGAAGAGAAGAACTTCAGCC
TCTTCAACTTCGTCAACGAGCTCAACAGCGAGATCGAACGGTTGGAGCTT
ATGATAGCGGAGACCAAGAACAGCATCGAGAAGTACAAGGGGCAAGGAGT
CAGCACAGACACGCAGAGGAAGAAGGTGTTGAGGGGGCTGGAGGAGCAGC
TCTCTATGACGGAGCGAGATCGAACGGTTGGAGCTTATGATAGCGGAGAC
CAAGAACAGCATCGAGAAGTACAAGGGGCAAGGAGTCAGCACAGACACGC
AGAGGAAGAAGGTGTTGAGGGGGCTGGAGGAGCAGCTCTCTATGACGGAG
GGTAAGGCTGACGAGTACGAGGGCCGGTACCAAACGGCGATGAAGACCAT
CAACCAGCTCAAGACCGGTATCCACAGCATCTTCAGCAGAATTGGGGTAA
GGCTGACGAGTACGAGGGCCGGTACCAAACGGCGATGAAGACCATCAACC
AGCTCAAGACCGGTATCCACAGCATCTTCAGCAGAATTGGCGCGGGTAGC
AACTCGTCCGTAGAGGAGATGCTGGGCAACCAAGGGGTGACGGAGTCGAA
CATGATGCAGTACCTTGGGATCATCGAGCAGAGGACGAGCGAGATACTGC
AGGCATACGCGACATCGCAGCAGATGACGCAAGCTGTAGAAACCCAGCGC
GGGTAGCAACTCGTCCGTAGAGGAGATGCTGGGCAACCAAGGGGTGACGG
AGTCGAACATGATGCAGTACCTTGGGATCATCGAGCAGAGGACGAGCGAG
ATACTGCAGGCATACGCGACATCGCAGCAGATGACGCAAGCTGTAGAAAC
CCAGGAATTCACGTCTCCCGTGGAAGGAGGAACAGCCGACGCCACTGTGC
CGCTGCGTCTCAACGTCCAGCCGCCCACCTGGGACGACTTCAGCTCGGGC
GAGGACTCGGACCAGGAGGATGACGAGAGGCCCTTGACCCGCGAGGAGCT
CAAGCGCAAGACGCTCAGAGGGGGCGGTGCGGCAAGCGGTGCCAACAACG
GTGGGGCAGTCGGTGGGGCGGCAAGCGGGTACCCGGGAGGAGCAAAGGGG
GGGGCAGGGGGCGCAGCAGGAAACAAGTACAAAGACGGGAAGGTGAGGGA
GAAGCGAGAGTTGGACGCTTTGAGAGGTCAAGGGTAAGAATTCACGTCTC
CCGTGGAAGGAGGAACAGCCGACGCCACTGTGCCGCTGCGTCTCAACGTC
CAGCCGCCCACCTGGGACGACTTCAGCTCGGGCGAGGACTCGGACCAGGA
GGATGACGAGAGGCCCTTGACCCGCGAGGAGCTCAAGCGCAAGACGCTCA
GAGGGGGCGGTGCGGCAAGCGGTGCCAACAACGGTGGGGCAGTCGGTGGG
GCGGCAAGCGGGTACCCGGGAGGAGCAAAGGGGGGGGCAGGGGGCGCAGC
AGGAAACAAGTACAAAGACGGGAAGGTGAGGGAGAAGCGAGAGTTGGACG
CTTTGAGAGGTCAAGGGTAA
back to top