mRNA_C-linearis_contig74.15018.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig74.15018.1 vs. uniprot
Match: D8LD61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD61_ECTSI) HSP 1 Score: 1254 bits (3246), Expect = 0.000e+0 Identity = 802/1408 (56.96%), Postives = 908/1408 (64.49%), Query Frame = 1
Query: 64 GGQRRGHPSRSYGK-IPAYSPPSDFRVNVEAGLRTALSLGLTFLWLRFGPFQGGLSFFAGVTAIVCVGNSAGQTISRSLMMIHGALIGAFCAILPRWLMTWGAFPAGAGFFIAIFLVLRSRRLTSLGKKFGCVGVTIVVLGRMSSEGLTVEWWRFASSFVRVNVEGGFFALVASLLPYPRFATRDGALRAQFMCRSLSAAVDACVTGFIKARDETSISKARLLCLQVRQNLRVVRMELQCSRLELGLLCFGFCAGGMQSADALKELSELMEEVLQGVRGMRQSMLDMHRTRAQTSFARVVGSALRGLSAAVDDALEATSRRSALLPASILACCHRDRHTTPASPSGDDTRDTGGAVDSGNRGTIHI-------------ITNNIG-------------------NNGTAVTDSXXXXXXXXXXADVDEENGLHSPPAARRQ--------------SSLRETTERLEDAVARVMEDYQRARKEVLYGLDDLGRPLEEAAAAREAGGSGGERLWSSQPREPAPLKNLPNLAMR-NFSATNARD--GPVTARTTPHPGLG----HTMAALGAGGGSVSGRDANPLAEPPNHVLVMRERQKLGGSATMARGAFLFSLSGLCAALAKKRVSHTGGWRASHSGEAARYVLSGLWKAIRPPPGLLTAAFSTGRMVGGWCRLCXXXXXXXXXXXXXXXXXXXDEARAAPKRLGSGGLXXXXXXXXXXXXXXXXXXXXXEDVRDKDTGRLAAVARSEYFWCFKVSVALTLCAVFTLSPFLADLFDPPLWIAVTASFVMENQSASAISTCLLRLVGTVLGAVYGILAAKLSNQPEDEPFSFQAHAVLLPWVAITCFFRNSSQFSYAALVAAFTAVVIFTGGNTVLGANGEAVSLARIVNTVVGSVIYLFPVDSRLIPTRAKDLVLEQVYVSLDAAFQEISTNGERMFGPVVCPRDSRARFLETLNRSRSKRLSGSIHSLDSGRLPLPPLPSPACAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAVAGSWGRQPSVGQLLPGFS-SEKPGLVVEASLFSSERLTSSTHRQPAPSRPGGDEDIVQD-------VPDDGGDGDKEGGGGRGARREXXXXADGEXXXXNRRVSREGEREEEERRAGSRGEAGKAKTTAASVMATSWGGHRKEAGCIRRMVGALTLQKRYLPLAELEPQLWYDPFPASAYQGMVAAQEELLRALTLLTKAAIAVSEDRSTKWRQELAELGSHLASLVQLLKIALEDARDVFRGGDLPGSFSHRNGSEYDDGIDDDGXXXXXXXGQG---MRMLDVQADAMRLNADVQSDFVMFIQAFIDRGAFPVWELESILRISTAVISVMGVQRALLTLGHAVATVIDRESSGSFYR 4092
G RR SRS+GK +PAY PPSDFRVNVEAGLRT LSLGL FLWL FGPF GGLSFFAGVTAIVCVG SAGQTISRSLMM HGAL+GA CAILPRWLM WG FPAGAGFF A+FLVLRSRRLTSLGKKFGCVGVT++VLG+MS +GLT+ WW ++FVRV++EGG ALVASLLPYPR ATR+GALRAQFMC SLS+AVDA VTGFIK RDETSIS+ARLLCLQVRQNL ++RMEL SRLELGLL GFCAGGMQSA+AL+ELSELME+VLQGVRGMRQSM+DMHRTRAQ SF+RVVGS+LRG+S AVD LEATSRRSALLPASILACCHR P DD++D V++ N+ + H+ +N G N TA+ S XXXXXX SSL ETT RLE+AV+R+M+DYQRARKEVLYGLDDLGRPLEE A++ SGG S PR+P L++L +L+ R N T + + G +T GL + G GG R+ +PL PNHVLVM+ERQKLG +ATMARGAFLFSLSGLC+AL KKRV+ TGGWR S S EAAR+V SGLW AIRPPPGLL A ST + C +A++A KRLG+G ++ G L+AV RS YFWCFKVS+ALTLCAVF+LSPFLA+LF+P +WI+VTASFVM+ QSASA+ST LLRLVGTVLGAVYGILAAKL+ QPEDE +SFQ +A+LLPWVA+TCFFRNSSQFSYAALVAAFTAVVIFT NTVLGANGEAVSLARIVNTVVGSV+YL VD L PTRAK+LVLEQ+Y+SLDAAF+E G + SGR PL P P V+G GR G+ G +E G PA S GG++ ++D VP G G G R E +GE GSR E G+A TAA V TSWGG KE G IR+MV AL LQKRYLPLAELEPQLWY+ FPASAYQ MVAAQEELLRALTLLTK+AIAVSEDRST+WR+EL+ELGSHLASLVQLLKIALEDARDVF GGDLP +FSHR G XXXXXXX +G +RMLDVQADAMRLNADVQSDFVMFIQAF+DRGAFPVWELESILRISTAV++VMGVQRALLTLGHAVATV+DRES GS+YR
Sbjct: 5 GHDRREQTSRSHGKKMPAYRPPSDFRVNVEAGLRTTLSLGLVFLWLGFGPFGGGLSFFAGVTAIVCVGGSAGQTISRSLMMTHGALVGAICAILPRWLMQWGRFPAGAGFFAAVFLVLRSRRLTSLGKKFGCVGVTLLVLGKMSDDGLTLSWWGSVATFVRVHIEGGVTALVASLLPYPRLATREGALRAQFMCHSLSSAVDARVTGFIKGRDETSISRARLLCLQVRQNLEIIRMELGWSRLELGLLFGGFCAGGMQSANALEELSELMEQVLQGVRGMRQSMVDMHRTRAQASFSRVVGSSLRGVSKAVDVTLEATSRRSALLPASILACCHRYTGIPMMQPHPDDSKDV--LVNTENKPSKHLQPAFPPSFPSPCFYFDNAGIXXXXXXXXXXXXALGTADNTSTAMKTSSVDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLLETTGRLEEAVSRMMKDYQRARKEVLYGLDDLGRPLEEVASSGREVDSGGRS--PSLPRDPVSLEDLQSLSKRINLPRTGSINLSGLKNGLSTTAGGLPARSKEAEVSEGIGGRR---REGDPLGGVPNHVLVMKERQKLGSAATMARGAFLFSLSGLCSALTKKRVNRTGGWRPSQSAEAARFVFSGLWTAIRPPPGLLGALSSTPGFLAARC-----------FRRRDSSRGHRRKAKSALKRLGAGSGPGSPTPRPGGV---------------REGGCLSAVTRSGYFWCFKVSLALTLCAVFSLSPFLAELFEPSVWISVTASFVMDTQSASAVSTSLLRLVGTVLGAVYGILAAKLAGQPEDESYSFQTYAILLPWVAVTCFFRNSSQFSYAALVAAFTAVVIFTSSNTVLGANGEAVSLARIVNTVVGSVVYLL-VDMLLAPTRAKNLVLEQIYLSLDAAFRE----------------------------------PGFLDGGGSGR-PLDPTP-------------------------------------------------------------------IVSGEQGRDSPPGKPAAGSPPAESAG--------------------PAGSPAGGEDGPLRDEGRRIVDVP--------RGSGLAGVRWEGSGAEEGE---------------------GSRLE-GEAAATAAVVSTTSWGGREKEPGGIRKMVCALALQKRYLPLAELEPQLWYEAFPASAYQDMVAAQEELLRALTLLTKSAIAVSEDRSTEWRRELSELGSHLASLVQLLKIALEDARDVFGGGDLPKAFSHRGGXXXXXXXXXXXXXXXXXXXEGEGMLRMLDVQADAMRLNADVQSDFVMFIQAFMDRGAFPVWELESILRISTAVLAVMGVQRALLTLGHAVATVVDRESYGSYYR 1226
BLAST of mRNA_C-linearis_contig74.15018.1 vs. uniprot
Match: A0A6H5JZ72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ72_9PHAE) HSP 1 Score: 421 bits (1081), Expect = 4.560e-130 Identity = 287/548 (52.37%), Postives = 337/548 (61.50%), Query Frame = 1
Query: 763 RMELQCSRLELGLLCFGFCAGGMQSADALKELSELMEEVLQGVRGMRQSMLDMHRTRAQTSFARVVGSALRGLSAAVDDALEATSRRSALLPASILACCHRDRHTTPASPSGDDTRDTGGAVDSGNRGTIHIITNNIGNNGTAVTDSXXXXXXXXXXADVDEENGLHSPPAARRQSSLRETTERLEDAVARVMEDYQRARKEVLYGLDDLGRPLEEAAAAREAGGSGGERLWSSQPREPAPLKNLPNLAMRNFSATNARDGPVTARTTPHPGLGHTMAALGAGG------GSVSGR--DANPLAEPPNHVLVMRERQKLGGSATMARGAFLFSLSGLCAALAKKRVSHTGGWRASHSGEAARYVLSGLWKAIRPPPGLLTAAFSTGRMVGGWCRLCXXXXXXXXXXXXXXXXXXXDEARAAPKRLGSGGLXXXXXXXXXXXXXXXXXXXXXEDVRDKDTGRLAAVARSEYFWCFKVSVALTLCAVFTLSPFLADLFDPPLWIAVTASFVMENQSASAISTCLLRLVGTVL-GAVYGILAAKLSNQPED 2379
RMEL SRLELGLL GFCAGGMQSA+AL+ELSELME+VLQGVRGM QSM+DMHRTRAQ SF+RVVGS+LR +S AVD LEATSRRSALLPASILACCHRD + I+T + N XXXXXXXXXX RRQSSL E T RLE+AV+R+M+DYQRARKEVLYGLDDLGRPLEE A+ GG S PREP L++L +L+ R R G + + GL T + A ++GR + +PL PNHVLVM+ERQKLG SATMARGAFLFSLSGLC+AL KKRVS GGWR S S EAAR+++SGLW AIRPPPGLL A ST ++ C + + A KRLG+ VR+ G L+AV RS Y WCFKVS+ALTLCAVF+LSPFLA+LF+P +WI++TA+FVM+NQSASA+ST LLRLVGTVL GA G + S P +
Sbjct: 4 RMELGWSRLELGLLFGGFCAGGMQSANALEELSELMEQVLQGVRGMLQSMVDMHRTRAQVSFSRVVGSSLRDVSKAVDLTLEATSRRSALLPASILACCHRDA--------------------------LGIMTTSSVGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQSSLLEATGRLEEAVSRMMKDYQRARKEVLYGLDDLGRPLEEVASLGREVDRGGRS--PSIPREPVSLEDLQSLSKREKLP---RTGSINISVLKN-GLSTTAGGVPASSKEAQVSDEIAGRRKERDPLGGVPNHVLVMKERQKLGSSATMARGAFLFSLSGLCSALTKKRVSRAGGWRPSQSAEAARFIISGLWTAIRPPPGLLGALSSTAGLLAPRC---------CRPRGSSSSRGHRRKVKLALKRLGA-------------RSGPVSPTSRTGGVREG--GCLSAVTRSGYLWCFKVSLALTLCAVFSLSPFLAELFEPSVWISITATFVMDNQSASALSTSLLRLVGTVLVGASMGYRSGGPSTVPVE 495
BLAST of mRNA_C-linearis_contig74.15018.1 vs. uniprot
Match: A0A6H5K0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H2_9PHAE) HSP 1 Score: 377 bits (969), Expect = 1.710e-113 Identity = 329/616 (53.41%), Postives = 381/616 (61.85%), Query Frame = 1
Query: 2329 GAVYGILAAKLSNQPEDEPFSFQAHAVLLPWVAITCFFRNSSQFSYAALVAAFTAVVIFTGGNTVLGANGEAVSLARIVNTVVGSVIYLFPVDSRLIPTRAKDLVLEQVYVSLDAAFQEISTNGERMFGPVVCPRDSRARFLETLNRSRSKRLSGSIHSLDSGRLPLPPLPSPACAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAVAGSWGRQPSVGQLL--PGFSSEKPGLVV---EASLFSSERLTSSTHR------QPAPSRPGGDEDIVQDVPDDGGDG-DKEGGGG--------RGARREXXXXADGEXXXXNRRVSREGEREEEERRAGSRGEAGKAKTTAASVMATSWGGHRKEAGCIRRMVGALTLQKRYLPLAELEPQLWYDPFPASAYQGMVAAQEELLRALTLLTKAAIAVSEDRSTKWRQELAELGSHLASLVQLLKIALEDARDVFRGGDLPGSFSHRNGSEYDDGIDDDGXXXXXXX-------GQG-MRMLDVQADAMRLNADVQSDFVMFIQAFIDRGAFPVWELESILRISTAVISVMGVQRALLTLGHAVATVIDRESSGSFYR 4092
GAVYGILAAKL+ QP E ++ + +A+LLPWVA+TCFFRNSSQFSYAALVAAFTAVVIFT +TVLGANGEAVSLARIVNTVVGSV+YL VD L+PTRAK+L+LEQ+Y+SLDAAF+E+S NGERMFGPVVCPR SRA+FL L+RS+S + SG P + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A SWGR P+V +LL PGFS+EKPG + L + SS H +PA P + P G DG D++ GGG G RR+ +GE V+ E+ V TSWGG KEAG + G+ + A + E++ +EL+ELGS LASL+QLLKI LEDARDVF GGDLP +FSHR G XXXXXXX G+G +RMLDVQADAMRLNADVQSDFVMFIQAF+DRGAFPVWELESILRI+TAV++VMGVQRALLTLGHAVATV+D E GS+ R
Sbjct: 19 GAVYGILAAKLAGQPGVESYNLRTYAILLPWVAVTCFFRNSSQFSYAALVAAFTAVVIFTSSSTVLGANGEAVSLARIVNTVVGSVVYLL-VDMLLVPTRAKNLLLEQIYLSLDAAFRELSINGERMFGPVVCPRHSRAQFLRALHRSQSI-------CVPSGGPGAAAAPHASRGGEGSPREAGKKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPAESWGRPPAVAELLLLPGFSTEKPGFLDGGGSGRLLDPRPIVSSEHGHDLPLGKPAAGSPPAESAGPAGSPAGGEDGPDRDEGGGILDVPSGLAGGRRDGSGAEEGEDFRLEGEVAAAAEK---------------------IVSVTSWGGREKEAGLKLSVDGS---------------------------RQCGACEAEVV----------------------EELSELGSRLASLLQLLKIVLEDARDVFGGGDLPKAFSHRGGGXXXXXXXXXXXXXXXXXXXXXGEEGEGVLRMLDVQADAMRLNADVQSDFVMFIQAFMDRGAFPVWELESILRINTAVLAVMGVQRALLTLGHAVATVVDHEFYGSYSR 556
BLAST of mRNA_C-linearis_contig74.15018.1 vs. uniprot
Match: A0A836CDY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDY4_9STRA) HSP 1 Score: 232 bits (592), Expect = 2.240e-58 Identity = 271/960 (28.23%), Postives = 408/960 (42.50%), Query Frame = 1
Query: 109 PAYSPPSDFRVNVEAGLRTALSLGLTFLWLRFGPFQGGLSFFAGVTAIVCVGNSAGQTISRSLMMIHGALIGAFCAILPRWLMTWGAFPAGAGFFIAIFLVLRSRRLTSLGKKFGCVGVTIVVLGRMSSEGLTVEWWR-FASSFVRVNVEGGFFALVASLLPYPRFATRDGALRAQFMCRSLSAAVDACVTGFIKARDETSISKARLLCLQVRQNLRVVRMELQCSRLELGLLCFGFCAGGMQSADALKELSELMEEVLQGVRGMRQSMLDMHRTRAQTSFARVVGSALRGLSAAVDDA-----------LEATSRRSALLP--------ASILACCHRDRHTTPASPSGDDTRDTGGAVDSGNRGTIHIITNNIGNNGTAVTDSXXXXXXXXXXADVDEENGLHSPPAARRQSSLRE---TTERLEDAVARVMED--------YQRARKEVLYGLDD----LGRPLEEAAAAREAGGSGGERLWSSQPREPAPLKNLPNLAMRNFSATNARDGPVTARTT----PHP---GLGHTMA-------------ALGA----GGGSVSGRDANPLAEPPNHVLVMRERQKLGGSATMARGAFLFSLSGLCAALAK---------KRVSHTGGWRASHSGEAARYVLSGLWKAIRPPPGLLTAAFSTGRMVGGWCRLCXXXXXXXXXXXXXXXXXXXDEARAAPKRLGSGGLXXXXXXXXXXXXXXXXXXXXXEDVRDKDTGRLAAVAR---SEYFWCFKVSVALTLCAVFTLSPFLADLFDPPLWIAVTASFVMENQSASAISTCLLRLVGT------------VLGAVYG--ILAAKLSNQPEDEPFSFQAHAVL--LPWVAITCFFRNSSQFSYAALVAAFTAVVIFTGGNTVLGANGEAVSLARIVNTVVGSVIYLFPVDSRLIPTRAKDLVLEQVYVSLDAAFQEISTNGERMFGPVVC 2727
P Y S+FR +EA RTAL+ ++ +W+ F + F + AIV ++AG T+ L ++HG + A A++ + A+ G FI FL+LR RRL LG++ GC + L S L V+ W + +++R VEGG +L+ASLLPYPR A R+GALR+Q+MC L ACV GF+ RDE IS+A LL Q+R N ++ +EL +L +G AGG+ + + +S+ M ++ V GMRQ+++ + Q+ F + L+ A+ A + A + LP A+ LAC TGGA G R + +G + L A R + L + T E L + A V D YQ AR ++L+G ++ + RP A+ R A + P P + + R +A DG R+ H G GH A A GA GGS+ G+ P ++ H V+ K G ARG F+ +L + L++ KR T W A R +L WKA+ P T + + W + DE R + L GG+ RL+A+ R S + + KV+ LT+C++F+L P LA+ F P W+A TA++++ ++SA+ LRL+G VLGA+YG + L N D P + + AVL PWVA+ CFFR+S +YAA+VAAFTAVVI G + +G A +LARI NT+ G +IY+ +D+ + P RAK ++ V +L E+ + + G + C
Sbjct: 43 PVYVAESEFRRGLEASFRTALATLISLVWITFRADPHPVIFINTILAIVTTLDTAGATLVAQLSVLHGVSLAAALAVITELVARNSAWGTGMCIFIGNFLILRRRRLDVLGRRLGCATLLAAAL---SFRTLGVDGWSSYLWAWLRGIVEGGICSLLASLLPYPRLAIREGALRSQYMCYLLQRGTSACVDGFLAGRDERMISRAGLLAEQMRLNCARIKGLHGACYMELNVLFWGQ-AGGLAPVELMGLVSQNMAPRVECVEGMRQALIALEHDAEQSGFIEHLWPHLQDTKHALGQASGIHMFMYSYLVLALMQEFLALPEMTGWKRRAAALACL------------------TGGAAGGGAR------ERPVWEDGRTYGERLYP---------------LLEEVATRMEELLEDGAATGENLAEVCAFVELDPDTTALRGYQIARLQILHGRNEDATTIARP---PASPRTAVAT----XXXXXPPSSGPQPSAASFPSRRAAAQLLLDGSGHGRSALLSNGHEAVIGDGHGAALTLDMITADDDGDAGGADARDAGGSIGGKVPPPFSQAL-HDEVVAAWDKRGFRGAFARGCFVSNLVTMVVMLSRLVEMVAVLEKRQEMTV-WNKFKL--AVRAMLRSTWKAVSPVDTYKTIKST----LSSWVQ-------------QQGSFFPHDEERQ--QALTEGGMRLKRSAPSLCR-------------------RLSALLRDNQSGFAYPLKVAAILTVCSLFSLEPTLAEQFAPGAWVAFTAAYIVSEDTSSAVVAGNLRLIGRQVALTLHDGGCLVLGAMYGWVLTDIALRNSTGDHPEALRWCAVLGLPPWVALCCFFRHSRTHAYAAVVAAFTAVVIMIGTFSAKDHSGYA-ALARIQNTIFGLIIYM-ALDNCIAPVRAKIVLKTHVTHALGTMKNEVEAVEDSLAGSLTC 908
BLAST of mRNA_C-linearis_contig74.15018.1 vs. uniprot
Match: A0A836CQ15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ15_9STRA) HSP 1 Score: 192 bits (488), Expect = 8.190e-46 Identity = 260/945 (27.51%), Postives = 383/945 (40.53%), Query Frame = 1
Query: 115 YSPPSDFRVNVEAGLRTALSLGLTFLWLRFGPFQGGLSFFAGVTAIVCVGNSAGQTISRSLMMIHGALIGAFCAILPRWLMTWGAFPAGAGFFIAIFLVLRSRRLTSLGKKFGCVGVTIVVLGRMSSEGLTVEWWRFASSFVRVNVEGGFFALVASLLPYPRFATRDGALRAQFMCRSLSAAVDACVTGFIKARDETSISKARLLCLQVRQNLRVV--------------------------RMELQCSRLELGLLCFGFCAGGMQSADALKELSELMEEVLQGVRGMRQSMLDMHRTRAQTSFARVVGSALRGLS----AAVDDALEATSRRSALLPASILACCHRDRHTTPASPSGDDTRDTGGAVDSGNRGTIHIITNNIGNNGTAVTDSXXXXXXXXXXADVDEENGLHSPPAARRQSSLRETTERLEDAVARVMEDYQRARKEVLYGLDDLGRPLEEAAAAREAGGSGGERLWSSQPREPAPLKNLPNLAMRNFSATNARDGPVTARTTPHPGLGHTMAALGAGGGSVSGRDAN-PLAEPPNHVLVMRER--------------------QKLGGSATMARGAFLFSLSGLCAALAKKRVSHTGGWRASHSGE------AARYVLSGLWKAIRPPPGLLTAAF----STGRMV----GGWCRLCXXXXXXXXXXXXXXXXXXXDEARAAPKRLGSGGLXXXXXXXXXXXXXXXXXXXXXEDVRDKDTGRLAAVARSEYFWCFKVSVALTLCAVFTLSPFLADLFDPPLWIAVTASFVMENQSASAISTCLLRLVGTVLGAVYGILAAKLSNQPEDEPFSFQAHAVLLPWVAITCFFRNSSQFSYAALVAAFTAVVIFTGGNTVLGANGEAVSLARIVNTVVGSVIYL----------FPVDSRLIPTRAKDLVLEQVYVSLDAAFQEISTNGERMFGPVV 2724
+ S+FR ++EA LRT L+ + W GP + L+FF+ V AIV ++AG TI+ SL +HGAL GAF A L R + + AG FI FL++R RRL SLG+K CV + + VL E +T W S+ + EGG +A +A ++PYPR A R+GALRAQ+ C+ + A+ +CV GF R ++ LL Q+R NL + + + C LE LL +G AGG A L+ + + M ++ + GM Q L + R+ + A + L AT + A + + + R RH++ + D + D + R + + + XXXXXXXXXX E H PAA ++ A +++ YQ AR +LYG+D G SA +A +G +G+T + V+ RD P P H+ V+ Q+ G ARGAF+FSL L LA+ + R AAR L++++ P P L+ AA S RM+ G C D + +R G G R +D R + KV++ LT+CA+F L +L+D W+ VTA F++ S+SA T LRL+G+V+GA+YG +L N A L PWVA FF+NS YAA+V+AFTAV+I G A G L RI NT++G VIY+ VD+ + P RAK L+ ++ +L ++ ++ G V
Sbjct: 10 FKAESEFRRSLEAALRTGLAAAASIAWAEVGPIRNPLNFFSPVVAIVVTLDTAGGTIAASLGCLHGALSGAFFAFLIRLIADQNCWVAGLLMFIGFFLIVRRRRLNSLGRKIACVTLIVAVL-TFEREDVTA-WIMSMLSWYKSVFEGGVWATLALMVPYPRLALREGALRAQYTCKLMQRAMVSCVEGFKMGR--RVLTDMDLLIEQMRLNLACLDPLDDMLVTXXXXXXXXXXXXXXXXXALCVPCE-LEQVLLLWGQ-AGGDSPAKGLQIIVKNMRARVECIEGM-QRALSLQRSDVEQXXXXXXXXXXXXXXXXXVAYLRPYLNAT--QCATMECATVEAGER-RHSSSIAQVLDFSSDL-----TTQRKVLDFMADLTAPRSRVXXXXXXXXXXXXXXLGRALEARQHDLPAAIAENM---------QVTAALLDAYQTARLHLLYGIDGGGXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXSAESAEEG-----------VGNTDSV-------VNWRDLQTPEFNPKVHMAVVXXXXXXXXXXXXXXXXXXXXXXXQQHGFRFAFARGAFVFSLVTLATMLARLSEAQAEIQRGHRLPRLRRVRIAARQAARMLYESVTPLPALIAAARMLYESVARMLYESPGSAC---------------GSAVVKYDTRQRLRQRHGPGSAALVLE-------------------RTEDYFRRH---HRDIVHPLKVALILTICALFVLVGYLSDKVAAGAWVGVTAGFIVSEDSSSAAVTSNLRLIGSVVGAMYGWFLTELVNNDAARKL---AAIGLPPWVAFCAFFKNSKSHGYAAIVSAFTAVIIVLGTFNA-SAVGSVAPLTRIQNTILGLVIYMAXXXXXXXXXXAVDNLVFPVRAKVLLRGELAEALGLMRDAVNCLDAQLLGQVA 860
BLAST of mRNA_C-linearis_contig74.15018.1 vs. uniprot
Match: A0A176VUM2_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VUM2_MARPO) HSP 1 Score: 81.3 bits (199), Expect = 1.180e-11 Identity = 56/172 (32.56%), Postives = 90/172 (52.33%), Query Frame = 1
Query: 2158 FKVSVALTLCAVFTLSPFLADLFDPPLWIAVTASFVMENQSASAISTCLLRLVGTVLGAVYGILAAKLSNQPEDEPFSFQAHAVLLPWVAITCFFRNSSQFSYAALVAAFTAVVIFTGG--NTVLGANGEAVSLARIVNTVVGSVIYLFPVDSRLIPTRAKDLVLEQVYVSL 2667
FK+++++ + A F + W VT F++ N + LRL GTVLGA+YG LA ++S S+ L+PWV ++ F R S+ + Y+ LV+AFTA V+ GG N + ++ RI T VG + ++F V++ + P RA LV +++ SL
Sbjct: 563 FKIALSMVMAATF--GNLIVSQEAHSFWATVTVGFIIGNYQGGSWRISSLRLQGTVLGAIYGYLALRVSKN-----HSWANLLALIPWVVLSSFVRYSTAYGYSGLVSAFTAAVLILGGFENDI-----RKYAMDRITETFVGVLSFVF-VETVVFPERAVLLVRKELVSSL 721
BLAST of mRNA_C-linearis_contig74.15018.1 vs. uniprot
Match: A0A814MBB7_9BILA (Hypothetical protein n=9 Tax=Rotaria TaxID=231623 RepID=A0A814MBB7_9BILA) HSP 1 Score: 63.5 bits (153), Expect = 2.980e-6 Identity = 50/180 (27.78%), Postives = 87/180 (48.33%), Query Frame = 1
Query: 2161 KVSVALTLCAVFTLSPFLADLFDPPLWIAVTASFVMENQSASAISTCLLRLVGTVLGAVYGILAAKLSNQPEDEPFSFQAHAVLLPWVAITCFFRNSSQFSYAALVAAFTAVVIFTG----GNTVLGANGEAVSLARIVNTVVGSVIYLFPVDSRLIPTRAKDLVLEQVYVSLDAAFQEI 2688
K V + + ++F + P LA F+ WI + + A++T +RLVGT+LGA++ + N + +L+PW+ I + R+ ++ YAA VAAFT V+I G G+ V G + +L RI +VG I + + + P A D++ + +L+ Q +
Sbjct: 450 KCVVIIGVGSIFVMVPRLAATFEDGQWILIALCMTQGDTVGGALTTMKMRLVGTLLGAMWAYITYLSVNDNV-----YNTLGMLVPWIFIFGYLRSLPEWGYAAAVAAFTPVLINLGRIPYGDIVPGGD---YALLRIEENLVGIAIAIV-LTLVIFPVFAIDILKNNIQGTLELCRQSV 620 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig74.15018.1 >prot_C-linearis_contig74.15018.1 ID=prot_C-linearis_contig74.15018.1|Name=mRNA_C-linearis_contig74.15018.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1365bp VTRVLWEAGVESPAAAVRMENGGQRRGHPSRSYGKIPAYSPPSDFRVNVEback to top mRNA from alignment at C-linearis_contig74:484788..502899- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig74.15018.1 ID=mRNA_C-linearis_contig74.15018.1|Name=mRNA_C-linearis_contig74.15018.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=18112bp|location=Sequence derived from alignment at C-linearis_contig74:484788..502899- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig74:484788..502899- >mRNA_C-linearis_contig74.15018.1 ID=mRNA_C-linearis_contig74.15018.1|Name=mRNA_C-linearis_contig74.15018.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=8190bp|location=Sequence derived from alignment at C-linearis_contig74:484788..502899- (Chordaria linearis ClinC8C monoicous)back to top |