mRNA_C-linearis_contig74.15008.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig74.15008.1 vs. uniprot
Match: A0A6H5JI18_9PHAE (PAO protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI18_9PHAE) HSP 1 Score: 623 bits (1607), Expect = 2.390e-212 Identity = 386/729 (52.95%), Postives = 450/729 (61.73%), Query Frame = 1
Query: 40 EYAGEDAVEELRDCVIVGAGVAGLSSAVDLERAGVDFVLLEAADRLGGRILTHKESQSRYNRERE---EGGVSRSSXXXXXSRSDGI-SRPLELGAQWLHGTVGNPLSDFCIEEGLFDSQEGEAELALAKRAYTAGEFQARRPDGTLVSRREFIRHSNAWSKAVLEAQMLYEASLQAG---------------------------------------------------NQGGGG----------REDEMGTFLHRRVREILRAGTGGXXXXEGRGDIDEGILGYLLRNQHAVEGCDDLNSVAVSGYGMYKELGGGDVRVPGGFSRVVDALAGKISPHRVRLNSPVTLVQWATEEGEGGGGDKGAASYSAKTYRDNHPSHPCVVEYSTARTGDRTGAGSGKEKEKEEGITRRVRCKRVVVTVSLGVLK-----DGKSLAFSPPLPPAKLSAIRRLGFGTTDKVFVRCTRERDAGGDRAGPDLLLHVGVLRPAEEXXXXXXXXXQ----RRQGQDTKIRDLPPPWIDDIFSFAVEGEYVYSWLTGPSAKAVETAAPPAEVTHALLSLLRTATHDPSWQESPETVELQSSG--DSRGTAVTRSPAALVRSDWNSNPFFRGSYSYIATGSSPADMEELARPLSVSASAPLTCAGGVGIAVDSPVAAGEGAEAGRYHENDIEAGRPGAGPISSARVIFAGEATHQQFFSTTHGGFETGRRAAREVLASCGFEE 1998
E GE+ EE+RDCVIVGAG+AGL++ DL++AG+D V+LEAA+RLGGRI TH+ES+S ++ E GV+ + S GI SRPLELGAQWLHGTVGNPL DFC+EEG+FDSQEG ELA+AKRAY AG+ QARRPDGT VSRREF+RHS AW++AVLEA+ LY ASL A N GG RED +G FLHRRVREILRAG G G IDE ILGYL+R Q AVEGCDDL+ V+V+GYGMY+EL GGDVRVPGGF RVV+ALA KISP R+RL SPV+ VQWA++ G + S A+ SHPCVVEY+T R G++ + +T R+RC+RV+VTV LGVLK DG +L FSPPLP AKL+AIRRLGFGT DK FVRCTR+ AG RAGPD L+VGVLRP + XXXXXXXX RR P W+DD+FSF EG YVYSWLTG SA+A E +VT ALLSLLRT T DPSWQ +PE + Q R + ALVRSDW SNP FRGSYSY+ TGSSPADMEEL RPLS A GV G+G G E +S ARV FAGEA H +FFST HGGF+ GRR AREVLASCGF++
Sbjct: 90 EPPGEEHGEEVRDCVIVGAGIAGLAAGADLQQAGMDLVVLEAANRLGGRIFTHEESRSHHHPSPHSSCEEGVT-------TTTSGGIPSRPLELGAQWLHGTVGNPLFDFCVEEGIFDSQEGRIELAMAKRAYAAGDVQARRPDGTQVSRREFVRHSEAWAQAVLEAETLYAASLAAEAETAAEGSNAEGQQQQQRQNIDPKRLEEAATTAVPNSPRQDPQVNGISQNVNNGGSTPNAAISSDSRREDRVGAFLHRRVREILRAGGGS----SGGCVIDEDILGYLVRKQQAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFFRVVEALAAKISPGRIRLQSPVSRVQWASQ-----GQQERRDSPFAE-------SHPCVVEYTTRRHSSGGIDVGGEQGHSDRVLTMRIRCRRVLVTVGLGVLKNRDVQDGMALTFSPPLPQAKLAAIRRLGFGTADKFFVRCTRKGSAGSGRAGPDASLNVGVLRPIHQQXXXXXXXXXXXXXRRWRDRGNSGSQNPSWVDDVFSFHSEGRYVYSWLTGASARAAEHTQDAEQVTDALLSLLRTTTRDPSWQAAPEQDQEQDQALDGVRRRTTAAAAGALVRSDWYSNPLFRGSYSYLGTGSSPADMEELGRPLSAPA--------GVDAEGTGSGHTGDGRRLGEEGEXXXX-----XXSLSRARVFFAGEAMHARFFSTAHGGFDAGRRTAREVLASCGFKD 782
BLAST of mRNA_C-linearis_contig74.15008.1 vs. uniprot
Match: D7G835_ECTSI (Similar to peroxisomal n1-acetyl-spermine/spermidine oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G835_ECTSI) HSP 1 Score: 371 bits (952), Expect = 3.450e-118 Identity = 225/421 (53.44%), Postives = 265/421 (62.95%), Query Frame = 1
Query: 163 AADRLGGRILTHKESQSRYNRERE---EGGVSRSSXXXXXSRSDGI-SRPLELGAQWLHGTVGNPLSDFCIEEGLFDSQEGEAELALAKRAYTAGEFQARRPDGTLVSRREFIRHSNAWSKAVLEAQMLYEASLQA-------------------------------------------------GNQGGGG------------REDEMGTFLHRRVREILRAGTGGXXXXEGRGDIDEGILGYLLRNQHAVEGCDDLNSVAVSGYGMYKELGGGDVRVPGGFSRVVDALAGKISPHRVRLNSPVTLVQWATEEGEGGGGDKGAASYSAKTYRDNHPSHPCVVEYSTARTGDRTGAGSGKEKEKEEGI-TRRVRCKRVVVTVSLGVLKDGKSLAFSPPLPPAKLSAIRRLGFGTTDKVFVR 1227
AADRLGGRI TH+ES+S ++ E GV+ ++ + G+ SRPLELGAQWLHGTVGNPL DFC+EEG+FDSQEG ELA+AKRAY A + QARRPDGT VSRREF+RHS AWS+AVLEA+ LY ASL A N GG RED +G FLH RVREILRAG G G IDE ILGYL+R QHAVEGCDDL+ V+V+GYGMY+EL GGDVRVPGGFSRVV+ALA KISP R+RL SPVT VQWA++ G ++ S A+ SHPCVVEY+T R G G E++ + + T R+RC+RV+VTV LGVLKDG +L FSPPLP AKL+AIRR+GFGT DK FVR
Sbjct: 90 AADRLGGRIFTHEESRSHHHPSPHSSCEEGVTTAT-----NACGGVPSRPLELGAQWLHGTVGNPLFDFCVEEGIFDSQEGRIELAMAKRAYAARDVQARRPDGTQVSRREFVRHSEAWSQAVLEAETLYAASLAAEAETAAEGGNAEDQQQQQRQNLDPKRLEAAATITVPNSPRQDPHVKGISDNVNNGGSTPNVVMSADSRREDRVGAFLHLRVREILRAGGGS----SGGCGIDEDILGYLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERIRLQSPVTRVQWASQ----GQQEERRESPFAE-------SHPCVVEYTTRRHSS-GGIDVGGEQDHSDLVSTMRIRCRRVLVTVGLGVLKDGTALTFSPPLPQAKLAAIRRVGFGTADKFFVR 489
BLAST of mRNA_C-linearis_contig74.15008.1 vs. uniprot
Match: D6WAZ4_TRICA (Protein anon-37Cs-like Protein n=2 Tax=Tribolium TaxID=7069 RepID=D6WAZ4_TRICA) HSP 1 Score: 166 bits (420), Expect = 1.160e-40 Identity = 168/645 (26.05%), Postives = 258/645 (40.00%), Query Frame = 1
Query: 82 VIVGAGVAGLSSAVDLERAGV-DFVLLEAADRLGGRILTHKESQSRYNREREEGGVSRSSXXXXXSRSDGISRPLELGAQWLHGTVGNPLSDFCIEEGLFDSQEGEAELALAKRAYTAGEFQARRPDGTLVSRRE----FIRHSNAWSKAVLEAQMLYEASLQAGNQGGGGREDEMGTFLH-------RRVREILRAGTGGXXXXEGRGDIDEGILGYLLRNQHAVEGCDDLNSVAVSGYGMYKELGGGDVRVPGGFSRVVDALAGKISPHRVRLNSPVTLVQWATEEGEGGGGDKGAASYSAKTYRDNHPSHPCVVEYSTARTGDRTGAGSGKEKEKEEGITRRVRCKRVVVTVSLGVLKDGKSLAFSPPLPPAKLSAIRRLGFGTTDKVFVRCTRERDAGGDRAGPDLLLHVGVLRPAEEXXXXXXXXXQRRQGQDTKIRDLPPPWIDDIFSFA-VEGEYVYSWLTGPSAKAVETAAPPAEVTHALLSLLRTATHDPSWQESPETVELQSSGDSRGTAVTRSPAALVRSDWNSNPFFRGSYSYIATGSSPADMEELARPLSVSASAPLTCAGGVGIAVDSPVAAGEGAEAGRYHENDIEAGRPGAGPISSARVIFAGEATHQQFFSTTHGGFETGRRAAREVL 1977
+IVGAG+AGLS+A L + G D+ LLEA +R+GGRI+ K S P+ELGA W+HG +GNP+ + ++ GL D + + A E + P TL E F+R + L + E G+ + E+ +L R +RE+L LL+ + + GCDD++ + + G Y EL GG++ +PGG+S ++ + I + + PV+ ++W + S D+ S V+E +T + E + G + +++ T+ LGVLK K F PPLP K AI RL FGT DK+ + R LH + E + +GQ+ DL W I+SF+ + + W++G A+ +ET + E+ ++LR +DP P +V + W+S P+ RGSY+ IA G+S D+E LA+PL + D E +P V+FAGE TH F+ST HG + TGR AA+ VL
Sbjct: 19 LIVGAGMAGLSAAYHLSKNGFNDYKLLEARNRVGGRIVQIKMG----------------------------SEPVELGANWIHGVLGNPVYELAMQHGLVDIMQ----TPKPHKVIAATENGKQVPFATLHEIYEAYLCFLRRCEEY---FLSQYLPPEGIDSVGDH----IKLEISLYLDKVQDPRDRHLRELL--------------------FECLLKRETCISGCDDMSEIDLLELGTYTELQGGNITLPGGYSSILGPVTQAIPAENLLVGHPVSQIRWNLNKRN-----------SIDNGNDSDDSDRTVIEETTKESNS-----PNVEVHCDNGKV--FKADQLICTIPLGVLKYNKDTLFQPPLPEYKREAIDRLLFGTVDKILLEYERP------------FLHPSIT----EVLLLWESDTEHPEGQN----DLSKNWYKKIYSFSKITETIILGWISGKEAEYMETLSKD-EIKDTCTTVLRKFLNDP---------------------FIPKPKNVVCTSWHSQPYTRGSYTAIAVGASQIDIECLAQPLFL----------------------------------DEEETKP--------VVLFAGEHTHCNFYSTVHGAYLTGRTAAQAVL 502
BLAST of mRNA_C-linearis_contig74.15008.1 vs. uniprot
Match: A0A6J0C3R3_NEOLC (spermine oxidase n=3 Tax=Diprioninae TaxID=410274 RepID=A0A6J0C3R3_NEOLC) HSP 1 Score: 164 bits (415), Expect = 5.080e-40 Identity = 166/640 (25.94%), Postives = 254/640 (39.69%), Query Frame = 1
Query: 82 VIVGAGVAGLSSAVDLERAG-VDFVLLEAADRLGGRILTHKESQSRYNREREEGGVSRSSXXXXXSRSDGISRPLELGAQWLHGTVGNPLSDFCIEEGLFDSQEGEAELALAKRAYTAGEFQARRPDGTLVSRREFIRHSNAWSKAVLEAQMLYEASLQAGNQGGGGREDEMGTFLHRRVREILRAGTGGXXXXEGRGDIDEGILGYLLRNQHAVEGCDDLNSVAVSGYGMYKELGGGDVRVPGGFSRVVDALAGKISPHRVRLNSPVTLVQW----ATEEGEGGGGDKGAASYSAKTYRDNHPSHPCVVEYSTARTGDRTGAGSGKEKEKEEGITRRVRCKRVVVTVSLGVLKDGKSLAFSPPLPPAKLSAIRRLGFGTTDKVFVRCTRERDAGGDRAGPDLLLHVGVLRPAEEXXXXXXXXXQRRQGQDTKIRDLPPPWIDDIFSFA-VEGEYVYSWLTGPSAKAVETAAPPAEVTHALLSLLRTATHDPSWQESPETVELQSSGDSRGTAVTRSPAALVRSDWNSNPFFRGSYSYIATGSSPADMEELARPLSVSASAPLTCAGGVGIAVDSPVAAGEGAEAGRYHENDIEAGRPGAGPISSARVIFAGEATHQQFFSTTHGGFETGRRAAREVLAS 1983
+I+GAG+AGL++A + G DFVLLEA R+GGRI+ + + +ELGA W+HG +GNP+ + + GL D +++ K + DG V F + V + E L A + G D +G + L + E R E + LL+ + + GCD ++ V + G Y EL GG++ +P G+S +++ +A I + +R V+ ++W AT+ D+ +AK + P C E G ++ +++V T+ LGVLK+ F PPLP +KL AI RL FGT DK+F+ R L+ G+ R + + DL W I+SF+ V + W++G +A+ +E + EV A S+LR +DP P + V + W+S PF RGSY+ IA G+ D+E + PL H D ++ RV FAGE TH F+ST HG + TGRRAA+ +L S
Sbjct: 19 IIIGAGMAGLAAANHFLKNGETDFVLLEARGRIGGRIVAIEMGNEK----------------------------IELGANWIHGVLGNPIFELAMANGLIDI------ISVPKPHKVVAAME----DGKQVP---FQVLQEIYEAYVCFLRRCEEYFLSAYSPPEG--VDSVGAHIALEAHLYLSS----LPPEERR--RRELLFDCLLKRETCITGCDTMDEVDLLEMGSYAELQGGNISLPQGYSAILEPVARHIPKNCIRTRHIVSCIRWDNADATDXXXXXXXDRTVIRSTAKDW----PVEVCC----------------------ENG--KKFFAEKIVCTLPLGVLKEKARELFKPPLPTSKLDAIDRLLFGTVDKIFLEYERP------------FLNPGISE--------IMLLWDDRSLPEAEKEDLSKTWFRKIYSFSKVSDTLLLGWISGNAAEYMERLST-KEVAEACTSILRRFLNDP---------------------FVPVPKSCVTTSWHSQPFSRGSYTAIAVGAGQMDIETIVEPL---------------------------------HSGD---------DATNLRVTFAGEHTHSSFYSTVHGAYLTGRRAAQTILDS 497
BLAST of mRNA_C-linearis_contig74.15008.1 vs. uniprot
Match: UPI001D070D78 (spermine oxidase isoform X2 n=2 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D070D78) HSP 1 Score: 164 bits (414), Expect = 1.010e-39 Identity = 169/670 (25.22%), Postives = 265/670 (39.55%), Query Frame = 1
Query: 82 VIVGAGVAGLSSAVDLERAG-VDFVLLEAADRLGGRILTHKESQSRYNREREEGGVSRSSXXXXXSRSDGI---SRPLELGAQWLHGTVGNPLSDFCIEEGLFD-------------SQEG-EAELALAKRAYTAGEFQARRPDGTLVSRREFIRHSNAWSKA---VLEAQMLYEASLQAGNQGGGGREDEMGTFLHRRVREILRAGTGGXXXXEGRGDIDEGILGYLLRNQHAVEGCDDLNSVAVSGYGMYKELGGGDVRVPGGFSRVVDALAGKISPHRVRLNSPVTLVQWATEEGEGGGGDKGAASYSAKTYRDNHPSHPCVVEYSTARTGDRTGAG-------SGKEKEKEEGITR---------RVRCKRVVVTVSLGVLKDGKSLAFSPPLPPAKLSAIRRLGFGTTDKVFVRCTRERDAGGDRAGPDLLLHVGVLRPAEEXXXXXXXXXQRRQGQDTKIRDLPPPWIDDIFSFAVEGE-YVYSWLTGPSAKAVETAAPPAEVTHALLSLLRTATHDPSWQESPETVELQSSGDSRGTAVTRSPAALVRSDWNSNPFFRGSYSYIATGSSPADMEELARPLSVSASAPLTCAGGVGIAVDSPVAAGEGAEAGRYHENDIEAGRPGAGPISSARVIFAGEATHQQFFSTTHGGFETGRRAAREVL 1977
+I+GAG+AGLS+A L + G DF++LE +R+GGRI GI S+ +ELGA W+HG +GNP+ +F + GL D +++G +A ++ + Y A RR + + +++ S LE + LY + N R +R + I LL+ + + GCD + + + G Y EL GG++ +P G+S ++D +A I ++ PV+ ++WA+ GD G +S T D+ S V+E + G S + + G ++ + +C V+ T+ LGVLKD F+P LP K+ AI RL FGT DK+F+ R P L ++ + E D + D+ W I+SF+ E + W++G A +E+ P + +LR +DP + P V + W S PF RGSY+ +A G+S D+E+LA+PL + I +P V+FAGE TH F+ST HG + TGR AA+ VL
Sbjct: 16 IIIGAGIAGLSAANHLVKNGFTDFLILEGRNRIGGRIC-------------------------------GIPIGSQKVELGANWIHGVLGNPIFEFAMSHGLIDIVNIPKPHKIVAATEKGTQASFSILQEIYEAYICFLRRCEEYFLC--QYLPPEGIHSVGDHIALEVE-LYLNKIDNSND--------------RHIRRL--------------------IFECLLKRETCITGCDSMTEIDLLELGSYTELQGGNIVLPSGYSSILDPMAKHIPADKILKRYPVSNIKWASA------GDSG---FSDDTGEDSDDSDKTVIEEGILVSSSDKREGKIICFIQSNYSSKSKNGFSKVEITCENGKKFQCDHVICTIPLGVLKDKVDTLFTPSLPTYKVEAIERLLFGTVDKIFLEYDR----------PFLSANISEVMLLWEP-------------DDDETTDISNNWYKKIYSFSKISETLLLGWISGKEAIYMES-LPYDVIADKCTEILRKFLNDP---------------------LIPKPNKCVCTTWYSQPFTRGSYTAMAVGASQLDIEQLAQPL----------------------------------YSSIHQQKPS--------VLFAGEHTHSNFYSTVHGAYLTGRTAAQIVL 521
BLAST of mRNA_C-linearis_contig74.15008.1 vs. uniprot
Match: UPI0011B46102 (spermine oxidase n=1 Tax=Gadus morhua TaxID=8049 RepID=UPI0011B46102) HSP 1 Score: 163 bits (412), Expect = 2.550e-39 Identity = 181/658 (27.51%), Postives = 266/658 (40.43%), Query Frame = 1
Query: 82 VIVGAGVAGLSSAVDLERAG-VDFVLLEAADRLGGRILTHKESQSRYNREREEGGVSRSSXXXXXSRSDGISRPLELGAQWLHGTVGNPLSDFCIEEGLF----DSQEGEAELALAKRAYTAGEFQARRPDGTLVSRREFIRHSNAWSKAVLEAQMLYEASLQAGNQGGGGREDEMGTFLHRRVREILRAGTGGXXXXEGRGDIDEGILGYLLRNQHAVEGCDD----LNSVAVSGYGMYKELGGGDVRVPGGFSRVVDALAGKISPHRVRLNSPVTLVQW-ATEEGE------GGGGDKGAASYSAKTYRDNHPSHPCVVEYSTARTGDRTGAGSGK----EKEKEEGITRRVRCKRVVVTVSLGVLKDGKSLAFSPPLPPAKLSAIRRLGFGTTDKVFVRCTRERDAGGDRAGPDLLLHVGVLRPAEEXXXXXXXXXQRRQGQDTKIRDLPPPWIDDIFSFAV------EGEYVYSWLTGPSAKAVETAAPPAEVTHALLSLLRTATHDPSWQESPETVELQSSGDSRGTAVTRSPAALVRSDWNSNPFFRGSYSYIATGSSPADMEELARPLSVSASAPLTCAGGVGIAVDSPVAAGEGAEAGRYHENDIEAGRPGAGPISSARVIFAGEATHQQFFSTTHGGFETGRRAAREVL 1977
V++GAG+AGL++ L AG D LL+A+ R+GGR+ + + + LELGA W+HGT GNP+ E GL DS+ ++L + G R G + + S+ +++ Q Y Q G ++ +G F +R+ + + D + + LL+ VE C+ ++ V++S +G + E+ G +PGGF ++VD LA I P V L V V W A+ +G+ GGGG++ R + +TA GDR G+G+ E E EE + V+VT SLGVLKD FSPPLP K+ AI +LG TT+K+F+ + + P+ V EE Q W I SF V G + W+ G A +E V LLR T +P + P+ P ++RS W SNP+ RGSYS+ GSS D E LA PL CA DS A P+ +V+FAGEATH++++STTHG +G+R A ++
Sbjct: 30 VVIGAGLAGLAATKTLLDAGFTDVRLLDASHRVGGRVQSIQHGTA----------------------------SLELGATWIHGTNGNPVYHLAQEHGLLEHTTDSERSVGRISLYGKN---GVAHYRTDRGRRIPKDLVEEFSDLYNEVFKLTQEFY----QNGKPVCAESQNSVGVFTRDYMRQRITS-------DPDDSDAVKKLKLSLLQQYLKVESCESSSPSMDEVSLSEFGEWTEIPGAHHVIPGGFMKIVDILARDIPPRNVSLGKAVRCVHWTASAQGQTHQRRGGGGGNRTRGEGGRDDGRRGRDGDHNENDRNTA--GDRLILGAGRAVRVECEDEEWLA----ADHVIVTASLGVLKDRHEALFSPPLPEEKVLAIEKLGISTTNKIFLEYAQPFWS------PECNSIKLVWEEEEEEEGPALPEEQ---------------WYKKICSFDVLYPPQRYGHVLNGWICGEEALLMERYDDDT-VAETCTELLRRFTGNP---DIPK------------------PRRILRSSWGSNPYIRGSYSFTRVGSSGGDFERLATPL--------PCA-------DSTKAP----------------------PL---QVLFAGEATHRKYYSTTHGALLSGQREANRLV 556
BLAST of mRNA_C-linearis_contig74.15008.1 vs. uniprot
Match: T1JH18_STRMM (Amino_oxidase domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JH18_STRMM) HSP 1 Score: 161 bits (407), Expect = 4.610e-39 Identity = 160/641 (24.96%), Postives = 251/641 (39.16%), Query Frame = 1
Query: 76 DCVIVGAGVAGLSSAVDLERAGV-DFVLLEAADRLGGRILTHKESQSRYNREREEGGVSRSSXXXXXSRSDGISRPLELGAQWLHGTVGNPLSDFCIEEGLFDSQEGEAELALAKRAYT--AGEFQARRPDGTLVSRREFIRHSNAWSKAVLEAQMLYEASLQAGNQGGGGREDEMGTFLHRRVREILRAGTGGXXXXEGRGDIDEGILGYLLRNQHAVEGCDDLNSVAVSGYGMYKELGGGDVRVPGGFSRVVDALAGKISPHRVRLNS-PVTLVQWATEEGEGGGGDKGAASYSAKTYRDNHPSHPCVVEYSTARTGDRTGAGSGKEKEKEEGITRRVRCKRVVVTVSLGVLKDGKSLAFSPPLPPAKLSAIRRLGFGTTDKVFVRCTRERDAGGDRAGPDLLLHVGVLRPAEEXXXXXXXXXQRRQGQDTKIRDLPPPWIDDIFSFAVEGEYVY-SWLTGPSAKAVETAAPPAEVTHALLSLLRTATHDPSWQESPETVELQSSGDSRGTAVTRSPAALVRSDWNSNPFFRGSYSYIATGSSPADMEELARPLSVSASAPLTCAGGVGIAVDSPVAAGEGAEAGRYHENDIEAGRPGAGPISSARVIFAGEATHQQFFSTTHGGFETGRRAAREVLAS 1983
D +I+GAG+AGL++A L G+ +F +LEA +R+GGRI+T R +ELGA W+HG +GNP+ ++ + L D + + K+ + A Q ++ T++ + W E Y S Q + +G + + L G E + + I +LL + + GCD ++ + ++ +G Y EL GG++ +P GFS ++++L + L PV+ ++W +G VE E E G K V+VT+ LGVLK F P LP K+ AI +LGFG DK+F+ R PD+ + + P E D+ W I+SF + +Y +WL+G A+ E+ E+ ++LR +DP P +VR+ W S P+ RGSY+ I TGS +D+E LA+P+ V H +D + + ++FAGEATH FFSTTHG F +G+ AA +L S
Sbjct: 23 DIIIIGAGLAGLTAAHYLTANGIRNFKILEARNRIGGRIMTITLGTQR----------------------------IELGANWIHGVLGNPIYEYALANKLVD-------ITIDKKPHNVIASTEQGKKIPITVLQE---VYEQYFWFYKKCED---YFVSKQRPTT------ESVGQKMEADIANYLS----GFSASEAA--VRKMIFVHLLNRETCISGCDSMDEIDLADFGAYSELPGGNLTIPLGFSSILNSLISNLKTEECILKDHPVSRIRWKLSDG--------------------------TVEV-----------------ECENGEI--YHSKHVIVTIPLGVLKAKHEQLFEPALPDDKIHAIEKLGFGIVDKIFLEYERPF------LHPDISEVINLWNPIEND------------------NDVGKSWFKKIYSFMKISDTLYLAWLSGREAEHAESITA-EEIADVCTNILRQFLNDP---------------------YVPKPIRVVRTRWLSEPYTRGSYTSIRTGSKQSDIENLAKPIYV-------------------------------HPSDTKV-------CTKPTLLFAGEATHPTFFSTTHGAFVSGKCAAELLLDS 481
BLAST of mRNA_C-linearis_contig74.15008.1 vs. uniprot
Match: UPI001402A8DC (spermine oxidase n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001402A8DC) HSP 1 Score: 159 bits (403), Expect = 2.710e-38 Identity = 165/651 (25.35%), Postives = 256/651 (39.32%), Query Frame = 1
Query: 82 VIVGAGVAGLSSAVDLERAG-VDFVLLEAADRLGGRILTHKESQSRYNREREEGGVSRSSXXXXXSRSDGISRPLELGAQWLHGTVGNPLSDFCIEEGLF----DSQEGEAELALAKRAYTAGEFQARRPDGTLVSRREFIRHSNAWSKAVLEAQMLYEASLQAGNQGGGGREDEMGTFLHRRVREILRAGTGGXXXXEGRGDIDEGILGYLLRNQHAVEGCDDLNSVAVSGYGMYKELGGGDVRVPGGFSRVVDALAGKISPHRVRLNSPVTLVQWATEEGEGGGGDKGAASYSAKTYRDNHPSHPCVVEYSTARTGDRTGAGSGKEKEKEEGITRRVRCK--------RVVVTVSLGVLKDGKSLAFSPPLPPAKLSAIRRLGFGTTDKVFVRCTRERDAGGDRAGPDLLLHVGVLRPAEEXXXXXXXXXQRRQGQDTKIRDLPPPWIDDIFSFAV------EGEYVYSWLTGPSAKAVETAAPPAEVTHALLSLLRTATHDPSWQESPETVELQSSGDSRGTAVTRSPAALVRSDWNSNPFFRGSYSYIATGSSPADMEELARPLSVSASAPLTCAGGVGIAVDSPVAAGEGAEAGRYHENDIEAGRPGAGPISSARVIFAGEATHQQFFSTTHGGFETGRRAAREVL 1977
V++GAG+AGLS+A L +G D +LEA++R+GGR+ + K + + +LGA W+HG GNP+ + GL D + ++L + A + + G + + S+ ++ E L + Q G G ++ +G F VR+ L+A + + +L L+ + C ++ V++S +G + E+ G +P GF +V+ LA I ++LN V + W E Y +T+ D++ VE G+E+E+E G RV C+ V+VT+SLGVLK+ F P LP K+SAIR LG TTDK+F+ E +H AE +DL W I F V G + W+ G A +E V LLR T +P + P ++RS W SNP+ RGSYSY GS+ AD+E+LA+PL P + + +++FAGEATH++F+STTHG +G R A ++
Sbjct: 28 VVIGAGLAGLSAARLLLASGFTDITVLEASERIGGRVQSIKLGCATF----------------------------DLGATWIHGADGNPVYQLAEDHGLLEETTDGERSTGRISLYSKNGVAHYYTS---GGQRIPKDVIEEFSDVYN----EVYNLTQEFFQRGRPVGAESQNSVGVFTRNVVRKRLKANREDSGISK---KLKLAMLQQFLKVESCESSCHSMDEVSLSEFGEWTEIPGAHHVIPSGFINIVEILARDIPKSVIQLNKVVKSIHWNRSFSE-------EIHYIQRTFADHN------VE--------------GQEEEEELGYRVRVECEDCEVIPADHVIVTMSLGVLKEYHETMFHPHLPEEKVSAIRMLGISTTDKIFLEF--EEPFWSPECNS---IHFVWEDDAESESPAYP-------------QDL---WYKKICGFDVLYPSERYGHVLSGWICGEEAIIMER-YDDETVAQTCTELLRKFTGNPHIPK---------------------PRRILRSGWGSNPYIRGSYSYTRVGSTGADVEKLAKPLPY----------------------------------------PKSTKAAPLQILFAGEATHRKFYSTTHGALLSGEREAGRLI 530
BLAST of mRNA_C-linearis_contig74.15008.1 vs. uniprot
Match: UPI00096B0403 (spermine oxidase-like n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B0403) HSP 1 Score: 155 bits (393), Expect = 5.270e-37 Identity = 159/641 (24.80%), Postives = 250/641 (39.00%), Query Frame = 1
Query: 82 VIVGAGVAGLSSAVDLERAGV-DFVLLEAADRLGGRILTHKESQSRYNREREEGGVSRSSXXXXXSRSDGISRPLELGAQWLHGTVGNPLSDFCIEEGLFDSQEGEAELALAKRAYTAGEFQARRPDGTLVSRREFIRHSNAWSKAVLEAQMLYEASLQAGNQGGGGREDEMGTFLHRRVREILRAGTGGXXXXEGRGDIDEGILGYLLRNQHAVEGCDDLNSVAVSGYGMYKELGGGDVRVPGGFSRVVDALAGKISPHRVRLNSPVTLVQWATEEGEGGGGDKGAASYSAKTYRDNHPSHPCVVEYSTARTGDRTGAGSGKEKEKEEGITRRVRCKRVVVTVSLGVLKDGKSLAFSPPLPPAKLSAIRRLGFGTTDKVFVRCTRERDAGGDRAGPDLLLHVGVLRPAEEXXXXXXXXXQRRQGQDTKIRDLPPPWIDDIFSFA-VEGEYVYSWLTGPSAKAVETAAPPAEVTHALLSLLRTATHDPSWQESPETVELQSSGDSRGTAVTRSPAALVRSDWNSNPFFRGSYSYIATGSSPADMEELARPLSVSASAPLTCAGGVGIAVDSPVAAGEGAEAGRYHENDIEAGRPGAGPISSARVIFAGEATHQQFFSTTHGGFETGRRAAREVLASCGFEE 1998
+I+GAG+AGLS+A + G DF +LEA R+GGRI+ + + + +ELGA W+HG +GNP+ + ++ GL D + + + E + P L +E + K E + + G + E+ +L + E R + + I LL+ + + GCDD+N + + G Y EL GG++ +P G+S ++ ++ I PH + V+ ++W + Y + V E S + +R A E E G R + +V+ T+ LGVLK F P LP KL AI RL FGT DK+ + R P++ + + P E K D W I+SF+ + + W++G A+ +ET P + +LR DP P V + W S P+ RGSY+ IA GSS D+E LA+PL + E++ + P+ V+FAGE TH F+ST HG + +GR AA+ V++ EE
Sbjct: 21 LIIGAGMAGLSAAYHFAKNGFHDFKVLEARGRIGGRIVQIEMGEEK----------------------------VELGANWIHGVLGNPVYELAMQHGLVDIMA----IPKSHKVVATTEKGKQVPFAVL---QEIYEAYLCFLKRCEEYFISQYMPPDGIDTVGDHIKLEVSLYLDKIKDEHER-------------HLRQLIFDCLLKRETCISGCDDMNEIDLMEIGSYTELQGGNITLPQGYSAILGPISAPIPPHNLHRKHAVSCIKWRRRD-----------KVKRDGYESDDSDRTVVDESSRESSVEREPADFMVEVICENGA--RFQADQVICTIPLGVLKSKAETLFQPKLPEYKLDAIDRLLFGTVDKILLEYDRPF------LNPNITEVLLLWEPETE-----------------KTDDYSKTWFKKIYSFSKITETLILGWISGKEAEYMET-LPNDIIIDTCTDILRKFLCDP---------------------YIPKPKRCVCTSWASQPYTRGSYTAIAVGSSQIDIECLAQPLFLD-------------------------------ESETK-------PV----VLFAGEHTHTNFYSTVHGAYLSGRTAAQIVMSDDQPEE 513
BLAST of mRNA_C-linearis_contig74.15008.1 vs. uniprot
Match: UPI001D07B033 (spermine oxidase n=2 Tax=Coccinellini TaxID=263631 RepID=UPI001D07B033) HSP 1 Score: 155 bits (393), Expect = 5.270e-37 Identity = 167/654 (25.54%), Postives = 262/654 (40.06%), Query Frame = 1
Query: 34 SEEYAGEDAVEELRDCVIVGAGVAGLSSAVDLERAGV-DFVLLEAADRLGGRILTHKESQSRYNREREEGGVSRSSXXXXXSRSDGISRPLELGAQWLHGTVGNPLSDFCIEEGLFDSQEGEAELALAKRAYTAGEFQARRPDGTLVSRREFIRHSNAWSKAVLEAQMLYEASLQAGNQGGGGREDEMGTFLHRRVREILRAGTGGXXXXEGRGDIDEGILGYLLRNQHAVEGCDDLNSVAVSGYGMYKELGGGDVRVPGGFSRVVDALAGKISPHRVRLNSPVTLVQW--ATEEGEGGGGDKGAASYSAKTYRDNHPSHPCVVEYSTARTGDRTGAGSGKEKEKEEGITRRVRCKRVVVTVSLGVLKDGKSLAFSPPLPPAKLSAIRRLGFGTTDKVFVRCTRERDAGGDRAGPDLLLHVGVLRPAEEXXXXXXXXXQRRQGQDTKIRDLPPPWIDDIFSFAVEGE-YVYSWLTGPSAKAVETAAPPAEVTHALLSLLRTATHDPSWQESPETVELQSSGDSRGTAVTRSPAALVRSDWNSNPFFRGSYSYIATGSSPADMEELARPLSVSASAPLTCAGGVGIAVDSPVAAGEGAEAGRYHENDIEAGRPGAGPISSARVIFAGEATHQQFFSTTHGGFETGRRAAREVLAS 1983
+EE + E + +I+GAG+AGLS+A L + G+ DF+LLEA +R+GGRI+ Q R E+ +ELGA W+HG +GNP+ + + GL D + + + + E + P L RE + K E L E G D +G + V L + + E I LL+ + + GCDD+N + + G Y+EL GG++ +P G+S ++ + I + LN PV ++W ++ E DK S K DN + +E+ T E ++ V+ T+ LGVLK F P LP KL AI RL FG DK+ + R P++ + + P ++ TK +D+ W I+SF+ E + W++G A+ +ET + + + +LR +DP P V + W S + RGSY+ IA G+S D+E LA+PL + ++ E + V+FAGE TH F+ST HG + TGR A++ +L+S
Sbjct: 4 NEESSKEKVNKNKYKVIIIGAGIAGLSAAYHLTKNGIKDFILLEARNRIGGRII-----QIRMGNEK-----------------------VELGANWIHGVLGNPIYELAMHYGLVDIMQ----IPKPHKLVASTEKGKQVPFQVL---REVYEAYLCFLKRC-EEYFLSEYLPPDGI-------DSVGQHIRLEVSIYLDK-----IKDKDERHLRELIFECLLKRETCISGCDDMNEIDLLELGTYEELQGGNIVLPEGYSSILKPFSDDIPSENILLNHPVNSIKWNSSSNGNESDDSDKTVVDDSEKL--DNSEKN---LEFMT-------------NVEVTTSNNKKFYGDHVICTIPLGVLKHKAKTLFQPQLPDFKLEAIDRLLFGVVDKILLEYDRPF------LNPNITEVLLLWEPDDQTNC-------------TK-QDISKTWYKKIYSFSKISETLLLGWVSGKEAEYMETLSNDI-IINVCTDILRKFLNDP---------------------FIPKPKNCVCTSWASQQYTRGSYTAIAVGASQVDIELLAQPL---------------------------------YADETE---------TKPLVLFAGEHTHTNFYSTVHGAYLTGRTASQAILSS 507 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15008.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig74.15008.1 >prot_C-linearis_contig74.15008.1 ID=prot_C-linearis_contig74.15008.1|Name=mRNA_C-linearis_contig74.15008.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=669bp RGCDGDYLAATSEEYAGEDAVEELRDCVIVGAGVAGLSSAVDLERAGVDFback to top mRNA from alignment at C-linearis_contig74:352206..359359- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig74.15008.1 ID=mRNA_C-linearis_contig74.15008.1|Name=mRNA_C-linearis_contig74.15008.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7154bp|location=Sequence derived from alignment at C-linearis_contig74:352206..359359- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig74:352206..359359- >mRNA_C-linearis_contig74.15008.1 ID=mRNA_C-linearis_contig74.15008.1|Name=mRNA_C-linearis_contig74.15008.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4014bp|location=Sequence derived from alignment at C-linearis_contig74:352206..359359- (Chordaria linearis ClinC8C monoicous)back to top |