mRNA_C-linearis_contig73.14954.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig73.14954.1 vs. uniprot
Match: A0A6H5JDS1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS1_9PHAE) HSP 1 Score: 991 bits (2563), Expect = 0.000e+0 Identity = 653/1257 (51.95%), Postives = 757/1257 (60.22%), Query Frame = 2
Query: 56 MHPWNEDRLREDSDLEDDP----------------------PSTHPAYAASATPSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADRHKLEREAPIRGLAKQMSRMDMFSNNRKVGNGNSTSLTNHSRTNSGIGFRISSGHGHSRAASRIDDG----ALSAATPTTSIQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGAVNATTVGGSGPRRQTNRPSSNSPRRLEEGLPGLGLSSESPPLAAXXXXXXASGEHRTAARARSATASRPPIGGVPYPETPPPLRGIERRGSLVNHEVV-EGDPKEQIEPELMIGEIQSIHLNDEIVLVRKALVVIVLSLVVAVIVRELAGPLDDEVIILEVVCFVSIFLLSFPVIRFTARLFAYIITTRASALLYRGNRYYFIVALHYDIAITTWSILSVVVWQQLFHRWVYTDDVGTDHTSLSRSIFRHGDSVLQCHLALRVGILVKNFLVLLVATSYLWRSYLQRVQSSILAQYMLLLLTDYCTKGYCNPGDQRFAIEMGRQGIQEGKNFSLYAVSKAMGFIPRNKLGHSFFRQLAGSDTLDSSRDATTLGNFLFDQLILRSCPTPERSPPFSSPQRKSLAAALTGGTVGNSIRSTRS--GQGGVYRALPRFGVQLQKRNSES----TGPRSPASPRLRSSMSDVGRVSPPPTAXXXXXGFGAAAGTGHPGRG-PGRISSALGKLLPVTERSSFASVLPGVEGGGXXXXXXXXXXXXXXXXXXXAAVTTSPRKNGASERGAGARGGAGGLAAVVDEAQQGGGKASPPGDTAEVRADTGGVGRGGGAEGRGSEPPVVWRASSAPAVAGK--ERAQALARDESAFTGSTRSVASSSNVSDKDSGAVAGDDGEDRRRDRDGAGKGTPESG--SVEDKKEXXXXXXXXXXXXXXXVLVRETLCPALEPELLDVAFKIFDHDSSGTVTKEEMVLGVVGTFKDHRSLALTLQDSEHIARKLGLIIMWVILFILFFVWLSIWGADVVSLSLTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYNSSMAKGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAANTPAGKLAALQTSLQAFSKSKDKPEGLYARMGFSLVGIEDSTKLTIRITFRQRGNWQ---------NMEKKWACQSMCTWAIKNFCDKIGISYALPEVPLRMKNK 3685
M+PWNEDRLREDSD ED+P P+ P +P+G A R+KLE+EAPIRGLAKQMSRMDMFS +K G + S H +T+SG+GF +SS HSR SR DD A S A P +AG + T GG G G+ G ++S++P A H + + PP G V YP+TPPPLR ++RRGSLVN EV E D KE IEPELMIGEIQSI L++EI LVR+A+V+I+LSLV AV+VRE AG LD +V I EVV FVS+ LLSFPVIRFTARLFA++ITTRAS LLYRGNRYYF+VALHYDIA+T WS+++ +W++LFH WVYTDD + ++R+IFRH VL+CHLALRVGIL+KN+LVLLVATSYLWR YLQRVQSSILAQY+LLLLTDYCTKGYCNPGDQ FAIEMGRQGI+EGKN SLYAVSKAMGFIPRNKLGH+FFRQLAGS+TLDSS+DATTLGNFLFDQLI+RS P P R +SP RKSLAAA TG G SIR +R G GG YRALPRFG Q+QKRNSES PR+P + R S D GR G GAAAG + + SS L KL+PV R+S S G GG ++ TSP ++ R A R G+ + + GG+ G+T G EG E PVV S++P+ +RA+ LA++ + F+ S SVA+SSN DK+ G G DGE R++D++ + +KKE VLVR+T CPALEPELLDVAFKIFD D+SGT+TKEEMVLGVVGTFKDHRSLA TLQDSEHIA+KLGLIIM VILFILFFVWLSIWGADVVSLS+TFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIY+ S +GEEPTNVTVVKVDLMTTVFKRWDEQ SLQ FSKSKDKPEGLY RMGFSLV IEDSTKLTIRITFRQRGNWQ NMEKKWACQSMCTWAIK+ CD + ISY LPE+P++MK K
Sbjct: 1 MNPWNEDRLREDSDPEDEPASGPITTTGSPRRRRSSLGSPTPTGLPGLEVPPSPAGGNNAGNLPSNRSTFSPSASSPTSSGTRCGRRRSVGAMSLRGASRADGAQMADARAAEEATA-RNKLEQEAPIRGLAKQMSRMDMFSGTKKSGGAGTNSWPGHRKTSSGMGFLLSSAQPHSRVPSRTDDRSPWEAASMAAPAPPPLPRPTGAGVAQTPVAATSTRAGQQRRGSQGQPASNISAGRLERATGGGGG----------------NSGVDGCRIASKTPAGVAVA--------HGVGHSVGAGDSQPPPQGDVNYPDTPPPLRRMQRRGSLVNREVPPEDDLKEPIEPELMIGEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVREFAGELDKDVNIREVVFFVSLLLLSFPVIRFTARLFAFVITTRASGLLYRGNRYYFVVALHYDIAVTIWSVVARYIWKELFHEWVYTDD-----SKMARTIFRHVSPVLECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLIIRSRPPPARPTTKTSPPRKSLAAAFTG-AGGGSIRMSRGSHGVGGTYRALPRFGGQMQKRNSESMAVPASPRTPVASPKRFSTFDAGRPQVEGMPLAIGGGGGAAAGKVPVAKAVSSKASSTLSKLVPVAGRASLMSSGRGSASGGTESSDVPGGDAGTT-----SSANTSPGRSRGRRREA--RTCVNGVGLSIADGS--GGEMEATGET--------------GTEGESPEQPVV---STSPSGRDTRIDRARVLAQNRNVFS-SCSSVANSSNYGDKECGD--GVDGEGRQQDQEXXXXXXXXXXXXTEAEKKEKPKQEE---------VLVRKTFCPALEPELLDVAFKIFDLDNSGTITKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTRGEEPTNVTVVKVDLMTTVFKRWDEQ--------------------------------------------ASLQEFSKSKDKPEGLYPRMGFSLVRIEDSTKLTIRITFRQRGNWQVGQEAIVVVNMEKKWACQSMCTWAIKSACDSLNISYFLPEIPVQMKEK 1144
BLAST of mRNA_C-linearis_contig73.14954.1 vs. uniprot
Match: D7FX37_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX37_ECTSI) HSP 1 Score: 982 bits (2539), Expect = 0.000e+0 Identity = 636/1148 (55.40%), Postives = 726/1148 (63.24%), Query Frame = 2
Query: 344 RHKLEREAPIRGLAKQMSRMDMFSNNRKVGNGNSTSLTNHSRTNSGIGFRISSGHGHSRAASRIDD------GALSAATPTTSIQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGAVNATTVGGSGPRRQTNRPSSNSPRRLEE---------GLPGLGLSSESPPLAAXXXXXXASGEHRTAARARSATASRPPI-GGVPYPETPPPLRGIERRGSLVNHEVVEGD-PKEQIEPELMIGEIQSIHLNDEIVLVRKALVVIVLSLVVAVIVRELAGPLDDEVIILEVVCFVSIFLLSFPVIRFTARLFAYIITTRASALLYRGNRYYFIVALHYDIAITTWSILSVVVWQQLFHRWVYTDDVGTDHTSLSRSIFRHGDSVLQCHLALRVGILVKNFLVLLVATSYLWRSYLQRVQSSILAQYMLLLLTDYCTKGYCNPGDQRFAIEMGRQGIQEGKNFSLYAVSKAMGFIPRNKLGHSFFRQLAGSDTLDSSRDATTLGNFLFDQLILRSCPTPERSPPFSSPQRKSLAAALTGGTVGNSIRSTRSGQGGV--YRALPRFGVQLQKRNSESTGPRSPASPRL------RSSMSDVGR--VSPPPTAXXXXXGFGAAAGTGHPGRGP------GRISSALGKLLPVTERSSFASVLPGVEGGGXXXXXXXXXXXXXXXXXXXAAVTTSPRKNGASERGAGARGGAGGLAAVVDEAQQGGGKASPPGDTAEVRADTGGVGRGGGAEGRGSEPPVVWRASSAPAVAGKERAQALARDESAFTGSTRSVASSSNVSDKDSGAVAGDDGEDRRRDRDGAGKG-TPESGSVEDKKEXXXXXXXXXXXXXXXVLVRETLCPALEPELLDVAFKIFDHDSSGTVTKEEMVLGVVGTFKDHRSLALTLQDSEHIARKLGLIIMWVILFILFFVWLSIWGADVVSLSLTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYNSSMAKGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAANTPAGKLAALQTSLQAFSKSKDKPEGLYARMGFSLVGIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKNFCDKIGISYALPEVPLRMKNK 3685
R+KLE+EAPIRGLAKQMSRMDMFS +K G + S H + +SG+GF +SS HSR SR DD +++ A P T AV +TT G Q + SP RLE G+ G +S++P A SG A ASRPP V YP+TPPPLR ++RRGSLVN EV + D PKE IEPELMIGEIQSI L++EI LVR+A+V+I+LSLV AV+VR AG YYF+VALHYDIA+T WS++++ +W++LFH+WVYTDD + L+R+IFRH + L+CHLALRVGIL+KN+LVLLVATSYLWR YLQRVQSSILAQY+LLLLTDYCTKGYCNPGDQ FAIEMGRQGI+EGKN SLYAVSKAMGFIPRNKLGH+FFRQLAGS+TLDSS+DATTLGNFLFDQLI+RS P P G SIR +R G YRALPRFG Q+QKRNSE PASPR R SM + GR V P A XX A G+ P + SS L KL+PV R++ S G GGG ++ TSP ++ R AG G+ ++ A GG+ GDT G EG E PV ++ S +RA+ LA++ S FT S SVASSSN DK+ G G DGE R++D++ KG SG + +K+ VLVR T CPALEPELLDVAFKIFD D+SGTVTKEEMVLGVVGTFKDHRSLA TLQDSEHIA+KLGLIIM VILFILFFVWLSIWGADVVSLS+TFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIY+ S +GEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAA T KL ALQTSLQ FSKSKDKPEGLY RMGFSLV IEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIK+ CD + ISY LPEVP++MK K
Sbjct: 117 RNKLEQEAPIRGLAKQMSRMDMFSGTKKSGGAGTNSRPGHKKNSSGMGFLLSSAQPHSRVPSRTDDRSPWEVASIATAAPPP---------------------------LPRPTGAGVAQTPVAVTSTTAGRQQRGNQVQPDGNVSPGRLERATGGGGGEYGVDGCRNASKTPAGVAVTHGVGHSG---------GAGASRPPPQDDVNYPDTPPPLRRMQRRGSLVNREVPQEDEPKEPIEPELMIGEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVRAFAGEF-----------------------------------------------YYFVVALHYDIAVTIWSVVAMYIWRELFHQWVYTDD-----SKLARAIFRHVNPALECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLIIRSRPPPAXXXXXXXXXXXXXXXXXXXXXXG-SIRMSRGSHAGAGTYRALPRFGGQMQKRNSEPMAV--PASPRTTVASPKRFSMFEAGRPQVEGMPLANGGXXXXXA-------GKVPVAKAVSSKASSTLSKLVPVAGRAALVSSGRGGAGGGTESSDARCDDVGTT-----SSANTSPGRSRVRRRKAGTC--VDGVDLSIEVAS--GGETEATGDT--------------GTEGESPEQPVASKSPSGRDTR-IDRARILAQNRSVFT-SCSSVASSSNYGDKECGD--GVDGEGRQKDQEDTVKGQAARSGETKAEKKEKPKQEE--------VLVRTTFCPALEPELLDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKK 1131
BLAST of mRNA_C-linearis_contig73.14954.1 vs. uniprot
Match: A0A6H5JBC1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC1_9PHAE) HSP 1 Score: 785 bits (2026), Expect = 1.930e-256 Identity = 507/978 (51.84%), Postives = 608/978 (62.17%), Query Frame = 2
Query: 908 IGGVPYPETPPPLRGIERRGSLVN-HEVVEGDPKEQIEPELMIGEIQSIHLNDEIVLVRKALVVIVLSLVVAVIVRELAGPLDDEVIILEVVCFVSIFLLSFPVIRFTARLFAYIITTRASALLYRGNRYYFIVALHYDIAITTWSILSVVVWQQLFHRWVYTDDVGTDHTSLSRSIFRHGDSVLQCHLALRVGILVKNFLVLLVATSYLWRSYLQRVQSSILAQYMLLLLTDYCTKGYCNPGDQRFAIEMGRQGIQEGKNFSLYAVSKAMGFIPRNKLGHSFFRQLAGSDTLDSSRDATTLGNFLFDQLILRSCPTPERSPPFSSPQRKSLA-------AALTGGTVGNSIRSTRSGQGGVYRALPRFGVQLQKRNSESTGPRSPASPRLRSSMSDVGRVSPPPTAXXXXXGFGAAAGTGHPG--RGPGRISSALGKLLPVTERSSFASVLPGVEGGGXXXXXXXXXXXXXXXXXXXAAVTTSPRKNGASERGAGARGGAGGLAAVVDEAQQGGGKASPPGDTAEVRADT------GGVGR-----GGGAEGRGSEPPVVWRASSAPAVAGKERAQALARDESAFTGSTRSVA-----------------------SSSNVSDKDSG-AVAGDDGEDRRRDRDGA-----GKGTPESGSVEDKKEXXXXXXXXXXXXXXXVLVRETLCPALEPELLDVAFKIFDHDSSGTVTKEEMVLGVVGTFKDHRSLALTLQDSEHIARKLGLIIMWVILFILFFVWLSIWGADVVSLSLTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYNSSMAKGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAANTPAGKLAALQTSLQAFSKSKDKPEGLYARMGFSLVGIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKNFCDKIGISYALPEVPLRMKNKLS 3691
+ GV P TPP L E+R +LV+ E E + E +LMIGEIQSI + DEIVL RKAL++I+ SLVVA + RE AG LD +V I+ VV F S LS+P+IRFT RLFAY +TTRASALLYRGN +Y++VALH DI++T WS+ S+ VW+QLF WVY D + LS +R+GD + QC++A RVG+L+KNFLVLLVATSYLWR YLQRVQSSILAQY+LLLLTDY G CNP DQ+FAIEMGR+GI+E + SLYAVSKAMGFIPR+KLGH+FFR+L GS+TL+SSRDA TLG ++FDQL+LRS P +SP K A L GG+ N++ S RS +GG GP + AS + SDVG +SP A GT + P R S G ER++ ++ P GGG + P AS+ AGA A VD A AS G + R + GG+ R GGG V A S VAG+ +A+ A S R V SS + +D D+G A G D D ++ G G+ + G D+ + +L RETLCP LE ++L++AF IFD D++G++TK EMVLGVV TFKDHRSLA TL DSEHIARKLGLII W+ILFIL FVWLSI G DV+SLS+TFASFLIAFSFMIGTAASNLM+AVLFIFVSRLYDVGDRVHIY+ G EP NV V KVDL TT F+RWDEQ+FY+PNHLLA KTIVNIQRTAHQWHEF I VAA T + KL L +LQ F+K KDKPEGLY RMGFSL GIEDST+L+IRI FRQRGNWQ+MEKKWACQSMCTWAIKN CD IGI+Y LPEVP+ MKNK+S
Sbjct: 255 LDGVRIPATPPQLDATEQRPNLVHVRETKEERIDTRSETDLMIGEIQSIQIADEIVLARKALMLILGSLVVATLFREFAGRLDKDVNIVNVVGFASTIFLSYPMIRFTIRLFAYFLTTRASALLYRGNSFYYVVALHQDISMTIWSVASMFVWRQLFAGWVYPTD-----SELSGKTYRYGDELFQCYVAYRVGMLLKNFLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYAATGKCNPDDQKFAIEMGRRGIKEQEKISLYAVSKAMGFIPRHKLGHAFFRELGGSNTLNSSRDAKTLGEYMFDQLLLRSRTYSPGCTPPASPSTKRWAYLANVGQTVLGGGSNANTLMSARSFRGGRL------------------GPSNRASLPSSWTASDVGSLSP-------------AKGTSSDATLKPPPRTRSRSG----AEERAAGSA--PREAGGGSPIVTRGSSKLSSSVDK----MRMGPNARAASDSAAGA------AAVTVDTAD-----ASDAGSSERPRNEVLPSEGGGGMARFREFHGGGKRALSVIQDVDSFADSELFVAGESKAEGTASGGEMEFPSLRVVDGMAPRHGHDVAELAKEIANGGSFSSQDRNDNDAGDASRGKDSADGTVQKEHEESIVQGNGSTQKGGSSDEVDKPQEEE---------LLTRETLCPMLEEQVLEMAFTIFDMDNNGSITKAEMVLGVVDTFKDHRSLAHTLHDSEHIARKLGLIIFWLILFILAFVWLSILGFDVLSLSVTFASFLIAFSFMIGTAASNLMTAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVTKVDLRTTSFRRWDEQIFYIPNHLLAEKTIVNIQRTAHQWHEFYIHVAATTSSRKLETLHNALQQFAKKKDKPEGLYPRMGFSLTGIEDSTRLSIRIVFRQRGNWQSMEKKWACQSMCTWAIKNACDTIGITYYLPEVPVVMKNKMS 1166
BLAST of mRNA_C-linearis_contig73.14954.1 vs. uniprot
Match: D7FX36_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX36_ECTSI) HSP 1 Score: 557 bits (1436), Expect = 4.100e-172 Identity = 414/966 (42.86%), Postives = 504/966 (52.17%), Query Frame = 2
Query: 908 IGGVPYPETPPPLRGIERRGSLVN-HEVVEGDPKEQIEPELMIGEIQSIHLNDEIVLVRKALVVIVLSLVVAVIVRELAGPLDDEVIILEVVCFVSIFLLSFPVIRFTARLFAYIITTRASALLYRGNRYYFIVALHYDIAITTWSILSVVVWQQLFHRWVYTDDVGTDHTSLSRSIFRHGDSVLQCHLALRVGILVKNFLVLLVATSYLWRSYLQRVQSSILAQYMLLLLTDYCTKGYCNPGDQRFAIEMGRQGIQEGKNFSLYAVSKAMGFIPRNKLGHSFFRQLAGSDTLDSSRDATTLGNFLFDQLILRS-CPTPERSPPFSSPQRKSLAAALTGGTV----GNSIRST---RSGQGGVYRALPRFGVQLQKRNSESTGPRSPASPRLRSSMSDVGRVSPPPTAXXXXXGFGAAAGTGHPGRGPGRISSALGKLLPVTERSSFASVLPGVEGGGXXXXXXXXXXXXXXXXXXXAAVTTSPRKNGASERGAGARGGAGGLAAVVDEAQQG-GGKASPPGDTAEVRADTGGVGRGGGAE--GRGSEPPVVWR-----ASSAPAVAGKERAQALARDESAFTGSTRSVASSS-----NVSD--KDSGAVAGDDGEDRR-RDRDGAGKGTPESGSVEDKK-------------EXXXXXXXXXXXXXXXVLVRETLCPALEPELLDVAFKIFDHDSSGTVTKEEMVLGVVGTFKDHRSLALTLQDSEHIARKLGLIIMWVILFILFFVWLSIWGADVVSLSLTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYNSSMAKGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAANTPAGKLAALQTSLQAFSKSKDKPEGLYARMGFSLVGIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKNFCDKIGISYALPEVPLRMKNKLS 3691
+ GV P TPP L E R +LV+ H+ E + E ELMIGEI+SI + DEIVL RKALV+I +SLV A + RE AGP +YF+VALH DI++T WSI S+ VW++LF WVY D + LS + +R+GD Q SSILAQY+LLLLTDY T G CNP DQ+FAIEMGR+GI+E + SLYAVSKAMGFIPR+KLGH+FFR+L G++TL+SSRDA TLG ++FDQL+LRS +P + P S R+ A G TV G S +T +S +GG A R + +S + G SP R+S + P P G AAG+ A G+ VT SS S + P AS+ AGA A VD A G + P D EV GG G G E G G V A S P V G+ +A+ A S R V + + +VS+ K++ EDR +D GA +G +G K+ + +L RETLCP LE ++L++AFKIFD +S+G++TK FVWLSI G DV+SLS+TFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIY+ G EP NV VVKVDL TT F+RWDEQ+FY+PNHLLA KTIVNIQRTAHQWHEF I VAA T + KL L +LQ F+K KDKPEGL+ RMGFSL GIEDST+L+IRI FRQRGNWQNM+KKWACQSMCTWAIKN CD IGI+Y LPEVP+ MKNK+S
Sbjct: 235 LDGVRIPATPPQLNATENRPNLVHVHDTKEERMDTRSETELMIGEIKSIQITDEIVLARKALVLIFVSLVGATLFREFAGPF-----------------------------------------------FYFVVALHQDISMTIWSIASMFVWRRLFAEWVYPTD-----SELSGNAYRYGDEFFQ---------------------------------SSILAQYILLLLTDYATTGECNPDDQKFAIEMGRRGIKEQEKISLYAVSKAMGFIPRHKLGHAFFRELGGTNTLNSSRDAKTLGEYMFDQLLLRSRMYSPGCTAPASPATRRWAYLANVGQTVLGGGGGSNANTLNAKSFRGGRLGASKRASLP----SSWTAGDVGSLSPSKRTSSDAT--LKPAPWLRSRSGAGGRAAGSAP--------REAGGRSPIVTRVSSKLS-------------------------SSVNKMRMGPNARAASDSAAGA------ATATVDTADASDAGSSEIPMD--EVLPSQGGGGMAGFREFHGGGKRALSVIEDADSFADSDPFVGGESKAEVTASCAEMEFSSLRVVDAMAPRYGHDVSELAKETANGGSFSSEDRNDKDAGGASRGEGSAGGTVQKEHEESTNVQSNGSTQKGGDSDEADKPQEEELLTRETLCPMLEHQVLEMAFKIFDLNSNGSITKA-------------------------------------------FVWLSILGFDVLSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVVKVDLRTTSFRRWDEQIFYIPNHLLADKTIVNIQRTAHQWHEFYIHVAATTSSQKLETLHDALQKFAKKKDKPEGLHPRMGFSLTGIEDSTRLSIRIIFRQRGNWQNMDKKWACQSMCTWAIKNACDTIGITYYLPEVPIVMKNKIS 1025
BLAST of mRNA_C-linearis_contig73.14954.1 vs. uniprot
Match: A0A835YNP7_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNP7_9STRA) HSP 1 Score: 276 bits (705), Expect = 3.970e-80 Identity = 135/276 (48.91%), Postives = 195/276 (70.65%), Query Frame = 2
Query: 2846 LDVAFKIFDHDSSGTVTKEEMVLGVVGTFKDHRSLALTLQDSEHIARKLGLIIMWVILFILFFVWLSIWGADVVSLSLTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRV-HIYNSSMAKGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAANTPAGKLAALQTSLQAFSKSKDKPEGLYARMGFSLVGIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKNFCDKIGISYALPEVPL 3670
++ F +FD D S +T EE+V GVV +KDH+SLALTLQDS+ +A KLG ++ IL L F+WL I+G D+ +L+LTFAS L+ S +IG A++NL ++++FIFV R +DVGDRV H + E N V ++DL+ T F+ WDE+V+Y+PNH+LAT+ I+NIQR+ QWHEF IQV A+TP+ KL L+ F++ +KP G++ + F+L G+E++ +LTIR+ FRQ+GNWQ + +KWA QSMCT I N C ++GI+Y P++PL
Sbjct: 1 MEQVFALFDRDDSNDITHEEVVNGVVNIYKDHQSLALTLQDSQRMAHKLGEVLGAGILIALIFIWLRIFGRDIFALTLTFASVLVGVSVLIGPASANLFASIVFIFVQRPFDVGDRVFHWFPDGRG---EMQNAVVTRIDLLITCFRAWDEKVYYLPNHVLATRPIINIQRSGDQWHEFFIQVLASTPSQKLWELKAKCVEFAEKHNKPSGIHPHIQFALTGVENTNRLTIRVCFRQKGNWQILSRKWAVQSMCTNCIVNSCKELGITYTQPQLPL 273
BLAST of mRNA_C-linearis_contig73.14954.1 vs. uniprot
Match: A0A835Z0M4_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M4_9STRA) HSP 1 Score: 261 bits (667), Expect = 3.840e-68 Identity = 248/867 (28.60%), Postives = 389/867 (44.87%), Query Frame = 2
Query: 1211 PVIRFTARLFAYIITTRASALLYRGNRYYFIVALHYDIAITTWSILSVVVWQQLFHRWVYTDDVGTDHTSLSRSIFRHGDSVLQCHLALRVGILVKNFLVLLVATSYLWRSYLQRVQSSILAQYMLLLLTDYCTKGYCNPGDQRFAIEMGRQGIQEGKNFSLYAVSKAMGFIPRNKLGHSFFRQLA-------GSDTLDSSRDATTLGNFLFDQLILRSCPTPERSPPFSS--------PQRKSLAA-ALTGGTVGNSIRST------------------------RSGQGGVYRALPRFGVQLQKRNSE-STGPRSPASPRLRSSMSDVGR-VSPPPTAXXXXXGFGAAAGTGHPGRGPGRISSALGKLLPVTERSSFASVLPGVEGGGXXXXXXXXXXXXXXXXXXXAAVTTSPRKNGASERGAGARGGAGGLAAVVDEAQQGGGKASPPGDTAEVRADTGGVGRGGGAEGRGSEPPVVWRASSAPAVAGKERAQALARDESAFTGSTRSVASSSNVSDKDSGAVAGDDGEDRRRDRDGAGKGTPESGSVEDKKEXXXXXXXXXXXXXXXVLVRET---------LCPALEPELLDVAFKIFDHDSSGTVTKEEMVLGVVGTFKDHRSLALTLQDSEHIARKLGLIIMWVILFILFFVWLSIWGADVVSLSLTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYNSSMAKGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAANTPAGKLAALQTSLQAFSKSKDKPEGLYARMGFSLVGIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKNFCDKIGISYALP 3658
P+ F ARLFAY+ T S +L+R N YF+VALH ++ L + W+Q W+ + ++++ +I C LA V + ++NF +LL+A+++LW YL+R QSSI AQY+LL+LT+YC+ G N + A ++ + + K SLYAV K++ F+ +K+G S F++L G DT+D+SR A LG +L+ +L + PP+ P+R L +L G +G+ + L++ SE S SP SPR R+ D G +SPPP L + LP+ S VT +P + +A PP P++ G S+ +SNV + +GTP + XXXXXXXXXXXXXXX+ CPA+ L AF +FD + G VTK++++ GVV +KDH++LA TL DS+ + KLG II ++ F++ F+WLSIWG +S+S+TF+SFL++F+FM G+ A+ L+ +++F+FV+ YDVGDR+ I + + VVK++L+TTVF+R D Q MPN LL+ ++N+QR+ + W EF++ V+A TP KL +L+ +Q F+ + G+Y ++GF+ I+DS KL +RI + R NW +++++W + AI + C ++GI++ P
Sbjct: 254 PLFNFLARLFAYLSITSTSRILFRFNALYFVVALHQELTNILVFGLLLAEWEQ----WIQPLVIDKAYSAVHNTIL--------CLLAAAVAVFLRNFTLLLIASTHLWLPYLERTQSSIFAQYVLLILTEYCSTGIINAEFEALASQIAAKTARWSK-LSLYAVYKSVSFVQHHKVGGSVFKELGLNAEGDGGEDTIDNSRQARALGEYLYKRLG-DAARAGTWQPPYKPXXXXXXXXPRRAYLPIQSLLHGHLGSKSTTACHHTSLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLRRTASEASLALSSPGSPRSRAGTKDDGPCLSPPPL---------------------------LAQPLPLPLXPS---------------------------------VTAAPLQP----------------------------QAPPP------------------------PSPILH-------------------------GLLASLRRNSNVPAPQPAXXXXXXXXXXXXKQ----EGTPPTSPXXXXXXXXXXXXXXXXXXXXXMAAENAELPNIELAKFCPAMSTTLRPHAFALFDKEQHGVVTKDDLLQGVVSIYKDHKNLARTLADSQQMVNKLGQIIGALMSFVMIFIWLSIWGYQFLSISITFSSFLLSFTFMFGSTATALVESIIFVFVTSAYDVGDRLMI--PDIMQTSRYHGCKVVKINLLTTVFERGDGQSLIMPNKLLSQMALINLQRSGNMWFEFVVGVSATTPLHKLHSLKGRMQKFAN--EDSSGIYHKIGFTFTEIQDSAKLVVRINVQGRFNWGDVKRRWEVHNATCQAIAHHCAELGITFTPP 961
BLAST of mRNA_C-linearis_contig73.14954.1 vs. uniprot
Match: A0A835YNU8_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.100e-43 Identity = 227/843 (26.93%), Postives = 358/843 (42.47%), Query Frame = 2
Query: 1223 FTARLFAYIITTRASALLYRGNRYYFIVALHYDIAITTWSILSVVVWQQLFHRWVYTDDVGTDHTSLSRSIFRHGDSVLQCHLALRVGILVKNFLVLLVATSYLWRSYLQRVQSSILAQYMLLLLTDYCTKGYCNPGDQRFAIEMGRQGIQEGKNFSLYAVSKAMGFIPRNKLGHSFFRQLAGSDTLDSSRDATTLGNFLFDQLILRSCPTPERSPPFSSPQRKSLAAALTGGTVGNSIRSTRSGQGGVYRALPRFGVQLQKRNSESTGPRSPASPRLRSSMSDVGRVSPPPTAXXXXX-GFGAAAGTGHPG-RGPGRISSALGKLLPVTERSSFASVLPGVEGGGXXXXXXXXXXXXXXXXXXXAAVTTSPRKNGASERGAGARGGAGGLAAVVDEAQQGGGKASPPGDTAEVRADTGGVGRGGGAEGRGSEPPVVWRASSAPAV-AGKERAQALARDESAFTGSTRSVASSSNVSDKDSGAVAG------------DDGEDRRRDRDGAGKGTPESGSVEDKKEXXXXXXXXXXXXXXXVLVRETLCPALEPELLDVAFKIFDHDSS----GTVTKEEMVLGVVGTFKDHRSLALTLQDSEHIARKLGLIIMWVILFILFFVWLSIWGADVVSLSLTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYNSSMAKGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAANTPAGKLAALQTSLQAFSKSKDKPEGLYA----RMGFSLVGIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKNFCDKIGISYALPEVPLRMKN 3682
FTA ++ ++ N YF V LHY A W++ + W+ + ++ S R VL C++ R+ L+ +L +A Y+WR YL+RVQ++I AQY++L+LTDY N DQ A++ K S+YA+S+AMGFIP+NKL H F AGS +DS R A LFD+L+ + P L A G + G + R++++TG R S S RVS PP + G AA P G T + +S XXXXXXX XXXXXXXX +++ ++ ARG S GD +A T G GG +PP ++ P G E A D T ++++ ++ G D E+ R A +P+ ED L L P + +L + D D++ +T+ + +V ++ RSLALTL+D E I KLG +I V FI FV+L I+ +++ L +T+ S ++AFSF+ G++A+N + +FIFV+R YDVGDRV+I + + N V +++++TTVF+RWD+ +PN LA + I N++R+ + V+ TP KL AL+ +Q ++++ P LY+ + + + T + + + Q+G+WQ+ K + + + C ++G+ YALP + +K
Sbjct: 363 FTAMAIKTLVMVLCNSRFIHSNHVYFFVRLHYASAQLMWAVFIYLFWKYGLAEY--------KSPNMQESTDRAVGRVLACYMVSRIVYLLNKMSLLELANRYMWRPYLERVQANIFAQYVILILTDYSLGYVRNDQDQYIALQFSENQGNWDK-MSMYAISRAMGFIPKNKLRHPVFAGSAGSVAMDSKRSARMFAGLLFDRLV-------------NGP----LDLARNDGPAPATXXXXXXXXXXPKSPPAELGSPPRARDADTTGG------VRRRSPSPARRVSSPPQSRGVVEVGVDAAVLRAAPSLHSVQEAPRQRGNSTTATAAVNASSHXXXXXXXXLXXXXXXXVDRXXXXXXXXXXXXXXXKESLSNSDAKYARG-------------------STSGDRRGSKAST--QGTGGVRHWNALKPPERKSLAAEPFQDRGAEIRDAFTDDAEESHRDTLKRLEAAHLREQMRKRALGLRLETAIEENEDDQAEEAVRPYSVAELKSPDESDDEDDPSPPK------------TLTLWMLRPVMIKQLAVKTMALLDGDTAVACDAEITRHKFQNAMVTIYQQRRSLALTLKDYESILIKLGYVISLVWSFIALFVFLWIFDQNILGLGVTWVSLVVAFSFLFGSSAANFFESCVFIFVTRAYDVGDRVYIKDEL----NDEANYVVQRINMLTTVFRRWDDHYTILPNQQLAKREIRNMRRSGDGVMLMTLLVSIATPRAKLEALKERMQEYARAVTGP--LYSCDPNSVDYCCRRVISCTNMEVFFVYSQKGSWQDNYLKVKNFHLMSLRLAEVCHELGLEYALPTQGVTLKT 1134
BLAST of mRNA_C-linearis_contig73.14954.1 vs. uniprot
Match: A0A0L0H4I0_SPIPD (EF-hand domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H4I0_SPIPD) HSP 1 Score: 152 bits (383), Expect = 2.220e-33 Identity = 94/282 (33.33%), Postives = 153/282 (54.26%), Query Frame = 2
Query: 2813 ETLCPALEPELLDVAFKIFDHDSSGTVTKEEMVLGVVGTFKDHRSLALTLQDSEHIARKLGLIIMWVILFILFFVWLSIWGADVVSLSLTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYNSSMAKGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAANTPAGKLAALQTSLQAFSKSKDKPEGLYARMGFSLVGIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKNFCDKIGISYALP 3658
+ +C P AF D D +G++T++E+ V+G +++ R L ++D KL +V F+ F + L I+G + ++ L F SF++A SF+ GTAA ++LF+F++ YD GDRV I N N+ V +V ++TTVFKR D Q+ Y PN L+A+K I N++R+ Q +Q+ +TP KL AL+ + F KS+ P + IE+ KL + + + +GNWQ+ K+W ++M +A+K ++GI YA P
Sbjct: 632 DLVCTFSSPTEAADAFAALDQDGNGSITRKEVKEVVIGMYRERRRLFRAMRDLSQALGKLNTFFYFVTSFVTFCIALPIFGISLTAM-LPFTSFILALSFVFGTAARTAFESLLFLFLTHPYDAGDRVVIDNQ---------NLLVEEVGVLTTVFKRLDGQLIYAPNTLVASKLIHNLRRSGDQSESIELQLNFDTPEEKLRALKERMIDFVKSE--PREFQGVCDIHISEIENLNKLKVNVILKHKGNWQDGSKRWNRRTMFMFALKKNLLELGIRYATP 901
BLAST of mRNA_C-linearis_contig73.14954.1 vs. uniprot
Match: A0A0D2U9P5_CAPO3 (EF-hand domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U9P5_CAPO3) HSP 1 Score: 150 bits (378), Expect = 1.140e-32 Identity = 92/278 (33.09%), Postives = 151/278 (54.32%), Query Frame = 2
Query: 2831 LEPELLDVAFKIFDHDSSGTVTKEEMVLGVVGTFKDHRSLALTLQDSEHIARKLGLIIMWVILFILFFVWLSIWGADVVSLSLTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYNSSMAKGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAANTPAGKLAALQTSLQAFSKSKDKPEGLYAR-MGFSLVGIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKNFCDKIGISYALPE 3661
L+P++ AFK+FDHD G +TK E V+ +K+ ++LA L D++ RKL + ++ FIL FVWL+I G DV + LT ++FL+AF+F+ G + L +V+F+FV+ +DV DRV N N V ++ LM TVF RWD V PN +L I N +R+ +Q+ +TPA K+ +QT + + + YA + FS+V +E++ +L + + + R +WQ+ + ++ +K C+++ I Y PE
Sbjct: 723 LKPDMAVRAFKLFDHDMDGKITKAEAKETVLNIYKERKALAAGLSDAKTAVRKLDNVFTVLLCFILLFVWLAILGVDVTNFFLTLSTFLLAFTFVFGNSVKELYESVVFLFVNHPFDVQDRVFFNNE---------NCFVTEIHLMNTVFTRWDGMVISYPNAVLNKLPIQNARRSTDMLEVIDLQIHVSTPAAKIEEMQTRFATYLR--ETAADWYALPVIFSVVELENTNRLKLSLGGKTRFSWQDGGARAKRKTDLIMFMKRVCEELDIHYYQPE 989
BLAST of mRNA_C-linearis_contig73.14954.1 vs. uniprot
Match: A0A6H5JSR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR3_9PHAE) HSP 1 Score: 146 bits (369), Expect = 1.270e-31 Identity = 94/276 (34.06%), Postives = 157/276 (56.88%), Query Frame = 2
Query: 2861 KIFDHDSSGTVTKEEMVLGVVGTFKDHRSLALTLQDSEHIARKLGLIIMWVILFILFFVWLSIWGADVVSLSLTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYNSSMAKGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAANTPAGKLAALQTSLQAFSKS-----KDKPEGLYA-RMGFSLVGIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKNFCDKIGISYALPEVPL 3670
++F+ G VT++E V V F RSL LTL D E I +K+G ++ V ++FFV L I G D+ SL LT+ S +AFSF+ G++AS +++F+FV++ YDVGD V+ + + GE+ VT +++++TTVF+RWD Q + N+++A K I N R++ H MI V+ +TP KL ++ + A + + GL + + + G+ D +L++ + +QR N NM +++ ++ + C++ GISY LP PL
Sbjct: 734 ELFEVPPEGVVTRKEFVDRTVDIFVQRRSLQLTLGDYEAILKKVGYLLSVVSAVVVFFVALRILGYDIGSLVLTWLSLAVAFSFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDDT--GGEDWYIVT--RINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHCHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVVCQQRENSANMGRRFGNSNLFHKLLARECNRHGISYTLPAQPL 1005 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig73.14954.1 >prot_C-linearis_contig73.14954.1 ID=prot_C-linearis_contig73.14954.1|Name=mRNA_C-linearis_contig73.14954.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1213bp MHPWNEDRLREDSDLEDDPPSTHPAYAASATPSGRRSSVAGGGSPSSLVSback to top mRNA from alignment at C-linearis_contig73:326203..341247- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig73.14954.1 ID=mRNA_C-linearis_contig73.14954.1|Name=mRNA_C-linearis_contig73.14954.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15045bp|location=Sequence derived from alignment at C-linearis_contig73:326203..341247- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig73:326203..341247- >mRNA_C-linearis_contig73.14954.1 ID=mRNA_C-linearis_contig73.14954.1|Name=mRNA_C-linearis_contig73.14954.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7278bp|location=Sequence derived from alignment at C-linearis_contig73:326203..341247- (Chordaria linearis ClinC8C monoicous)back to top |