mRNA_C-linearis_contig73.14952.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig73.14952.1 vs. uniprot
Match: A0A6H5JBC1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC1_9PHAE) HSP 1 Score: 808 bits (2086), Expect = 2.030e-264 Identity = 598/1289 (46.39%), Postives = 723/1289 (56.09%), Query Frame = 2
Query: 146 MLSPGGTPCSHR-PREESG-----------------PQQXXXXXXLDADQSERTAAAGICSSAAPLHRENHGFGSMVRFGKR----RPTITSPSKTDGNQLSEEAQAEASA---RAKEAPIRGLAMQLSRKSMFSTDTKSSSMPNGHSRNTXXXXXXXXXXXXXXPSHGGXXXXXXXXXXXSSGILGSMFPPSQPRLSFSSSSKAERHAAGVHPAGPTAPASTVASXXDVVSAQTASAVTGPHLPPLPPPVKTATFGLEYVSKSNQRRQDASSNPSTNPQQLEEG---------------------SSRPSWPHG--PLYPPETPPILHTDQRRSNLVNNNANRDSKETEAKSEPELMIGEIQSIQIADEIALARKALVIIVVSLVGAALVRRFAGPLTEDLNIIEVVGFMSTLLLSFPVIRFTVRLFAYVVTTRASALLYKGNSFYFAVALHQDISMTIWCIVAVAVWSQLFPEWVYSDDRERLPRILYRYGGNVLKCFLAARVGVLVKNFLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYATKGFYNSDDERFAVEMARQGIKEEKNISLYAVSKAMGFIPRNKLGHAFFRELNESDTLDSSKDARTLGMFLFDQLVYRSRPKPVPDHTAPPSPTPTTGRLNAALAKGAATVFGGVVGVGGVGYSVTNALXXXXXXXXXXAAALAANRRPGLPAAF-------LEPARSRS--VSPKRPPGSASGSGSVPSGSRHGLTPHAGXXXXXXXXXKVPVVDRLSRKAAAGLGKIRSGTGLSSAGASGSSSSGSIGVVGGVVVVGGVSHRSSGTVAIEANSSTGTIGSLVPSFREGGGLDGDDDKPAGFRRLGAGGGWVGGLSVIEDNESQAGSAFASARAGARGESASCCGFEESESERPLTGSYEGQXXXXXXXXXXXXXXXXXXXXXXXXDAS-------AAGRQGEDDAAVRRSEA----GGGENVKGRKRHKDKKEXXXXXXXXEEVLLTRETLCPGLEDLLLDVAFKIFDGNGNSSITKEEMVRGVVETFRAHRSLANTLRDSEHIARKLGLIIMWLINVVLFFVWLSIWGADVLSLSLTFASFLIAFSFMIGTAASNLVTAVLFIFVSRLYDVGDRVHIYDGSETVGVKPMNVTVSKIDLRTTSFRRWDEQIFYIPNHLLAAKTIVNIQRTADQWHEFRIQVAASTPSEKLRELQEALKAFAESKDKAEGLYPRTGFALLGIEDSTKLSIRITFRQRANWQNMEKKWACQSMCTWAIKNFCDKIGISYSLPEVPFLMKNKL 3808
M+S GG+ ++R PREES PQQ LD D + +T A S+ L + G +VR R S++D Q+ EEA A +A R KE PIRGLA LS +FS K +S PSH S ++G ++P S SS +R +G T S DV A S T +Y + ++ R Q + S NP LEEG S R S P+ + P TPP L ++R NLV+ ++ + + +SE +LMIGEIQSIQIADEI LARKAL++I+ SLV A L R FAG L +D+NI+ VVGF ST+ LS+P+IRFT+RLFAY +TTRASALLY+GNSFY+ VALHQDISMTIW + ++ VW QLF WVY D E L YRYG + +C++A RVG+L+KNFLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYA G N DD++FA+EM R+GIKE++ ISLYAVSKAMGFIPR+KLGHAFFREL S+TL+SS+DA+TLG ++FDQL+ RSR P T P SP+ T R A LA TV GG S N L L + R LP+++ L PA+ S + K PP + S R G A P+V R S K ++ + K+R G +A S G + A +A SS ++PS EGGG A FR GG LSVI+D +S FA + GES + E E P +G D + + G+ D + E G G KG + K EE LLTRETLCP LE+ +L++AF IFD + N SITK EMV GVV+TF+ HRSLA+TL DSEHIARKLGLII WLI +L FVWLSI G DVLSLS+TFASFLIAFSFMIGTAASNL+TAVLFIFVSRLYDVGDRVHIYD +T GV+PMNV V+K+DLRTTSFRRWDEQIFYIPNHLLA KTIVNIQRTA QWHEF I VAA+T S KL L AL+ FA+ KDK EGLYPR GF+L GIEDST+LSIRI FRQR NWQ+MEKKWACQSMCTWAIKN CD IGI+Y LPEVP +MKNK+
Sbjct: 1 MVSSGGSGANYRRPREESDIARRPGNQTYQLPPHPHPQQRQQ---LD-DSTRQTGADASHSNHTSLGSVSSRLGRLVRRRSHMVHGRTKSRRSSRSDDAQVFEEALAAEAAQMEREKEFPIRGLARALSNGDLFSHGAKGTS------------GREPSKTTSVGPSH----------KKNVSSLMGFLWP--------SPSSTEKRPPSG----------QTSLSAADVGGASPFSGAT-----------------KDYPASASGREQTLNYQASVNPHHLEEGGVGGGVDETRRHPAAGSMGHVSDRVSLPNALDGVRIPATPPQLDATEQRPNLVHVRETKEER-IDTRSETDLMIGEIQSIQIADEIVLARKALMLILGSLVVATLFREFAGRLDKDVNIVNVVGFASTIFLSYPMIRFTIRLFAYFLTTRASALLYRGNSFYYVVALHQDISMTIWSVASMFVWRQLFAGWVYPTDSE-LSGKTYRYGDELFQCYVAYRVGMLLKNFLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYAATGKCNPDDQKFAIEMGRRGIKEQEKISLYAVSKAMGFIPRHKLGHAFFRELGGSNTLNSSRDAKTLGEYMFDQLLLRSRTYS-PGCTPPASPS--TKRW-AYLANVGQTVLGGG--------SNANTLMSARSFRGGR---LGPSNRASLPSSWTASDVGSLSPAKGTSSDATLKPPPRTRS---------RSGAEERAAGSAPREAGGGSPIVTRGSSKLSSSVDKMRMGPNARAASDS---------------AAGAAAVTVDTADASDAGSSERPRNEVLPS--EGGG------GMARFREFHGGGKRA--LSVIQDVDS-----FADSELFVAGESKAEGTASGGEMEFPSLRVVDGMAPRHGHDVAELAKEIANGGSFSSQDRNDNDAGDASRGKDSADGTVQKEHEESIVQGNGSTQKGGSSDEVDK-------PQEEELLTRETLCPMLEEQVLEMAFTIFDMDNNGSITKAEMVLGVVDTFKDHRSLAHTLHDSEHIARKLGLIIFWLILFILAFVWLSILGFDVLSLSVTFASFLIAFSFMIGTAASNLMTAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVTKVDLRTTSFRRWDEQIFYIPNHLLAEKTIVNIQRTAHQWHEFYIHVAATTSSRKLETLHNALQQFAKKKDKPEGLYPRMGFSLTGIEDSTRLSIRIVFRQRGNWQSMEKKWACQSMCTWAIKNACDTIGITYYLPEVPVVMKNKM 1165
BLAST of mRNA_C-linearis_contig73.14952.1 vs. uniprot
Match: D7FX37_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX37_ECTSI) HSP 1 Score: 706 bits (1821), Expect = 6.690e-226 Identity = 530/1190 (44.54%), Postives = 645/1190 (54.20%), Query Frame = 2
Query: 314 SMVRFGKRRP----TITSPSKTDGNQLSE-EAQAEASARAK---EAPIRGLAMQLSRKSMFSTDTKS-----SSMPNGHSRNTXXXXXXXXXXXXXXPSHGGXXXXXXXXXXXSSGILGSMFPPSQPRLSFSSSSKAERHAAGVHPAGPTAPASTVASXXDVVSAQTASAVTGPHLPPLPPPVKTATFGLEYVSKSNQRRQDASSNPSTNPQQLE----------EGSSRPSWPHGPLYPPETPPILHTDQRRSNLVNNNANRDSKETEAKSEPELMIGEIQSIQIADEIALARKALVIIVVSLVGAALVRRFAGPLTEDLNIIEVVGFMSTLLLSFPVIRFTVRLFAYVVTTRASALLYKGNSFYFAVALHQDISMTIWCIVAVAVWSQLFPEWVYSDDRERLPRILYRYGGNVLKCFLAARVGVLVKNFLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYATKGFYNSDDERFAVEMARQGIKEEKNISLYAVSKAMGFIPRNKLGHAFFRELNESDTLDSSKDARTLGMFLFDQLVYRSRPKPVPDHTAPPSPTPTTGRLNAALAKGAATVFGGVVGVGGVGYSVTNALXXXXXXXXXXAAALAANRRPGLPAAFLEPARSRSVSPKRPPGSASGSGSVPSGSRHGLTPHAGXXXXXXXXXKVPVVDRLSRKAAAGLGKIRSGTGLSSAGASGSSSSGSIGVVGGVVVVGGVSHRSSGTVAIEANSSTGTIGSLVPSFREGGGLDGDDDKPAGFRRLGAGGGWVGGLSVIEDNESQAGSAFASARAGARGESASCCGFEESESERPLT---GSYEGQXXXXXXXXXXXXXXXXXXXXXXXXDASAAGRQGEDDAAVRRSEAGGGENVKGRKRHKDKKEXXXXXXXXEEVLLTRETLCPGLEDLLLDVAFKIFDGNGNSSITKEEMVRGVVETFRAHRSLANTLRDSEHIARKLGLIIMWLINVVLFFVWLSIWGADVLSLSLTFASFLIAFSFMIGTAASNLVTAVLFIFVSRLYDVGDRVHIYDGSETVGVKPMNVTVSKIDLRTTSFRRWDEQIFYIPNHLLAAKTIVNIQRTADQWHEFRIQVAASTPSEKLRELQEALKAFAESKDKAEGLYPRTGFALLGIEDSTKLSIRITFRQRANWQNMEKKWACQSMCTWAIKNFCDKIGISYSLPEVPFLMKNK 3805
S RFG+RR ++ PS+ DG Q+++ A AEA+AR K EAPIRGLA Q+SR MFS KS +S P GH +N+ H + + PP PR P G + VA Q P P ++ AT G + D N S P + G+SRP P + P+TPP L QRR +LVN ++ + E EPELMIGEIQSI++ +EIAL R+A+V+I++SLV A LVR FAG +YF VALH DI++TIW +VA+ +W +LF +WVY+DD +L R ++R+ L+C LA RVG+L+KN+LVLLVATSYLWRPYLQRVQSSILAQYILLLLTDY TKG+ N D+ FA+EM RQGIKE KNISLYAVSKAMGFIPRNKLGH FFR+L S+TLDSSKDA TLG FLFDQL+ RSRP P G+ + G G AL +R P A R+ SPKR +G V G+ P A XXXXX KVPV +S KA++ L K+ + AG + SSG G GG S V ++++T S V + G +DG D + V E++A + G GES +S S R Q GRQ + + V+ A GE K K+ K K +E +L R T CP LE LLDVAFKIFD + + ++TKEEMV GVV TF+ HRSLA+TL+DSEHIA+KLGLIIM +I +LFFVWLSIWGADV+SLS+TFASFLIAFSFMIGTAASNL++AVLFIFVSRLYDVGDRVHIY GS T G +P NVTV K+DL TT F+RWDEQ+FY+PNHLLA KTIVNIQRTA QWHEF IQVAA+T EKL LQ +L+ F++SKDK EGLY R GF+L+ IEDSTKL+IRITFRQR NWQNMEKKWACQSMCTWAIK+ CD + ISY LPEVP MK K
Sbjct: 79 SGTRFGRRRSIGAISLRGPSRADGAQMADARAAAEATARNKLEQEAPIRGLAKQMSRMDMFSGTKKSGGAGTNSRP-GHKKNSSGMGFLLSSAQP----HSRVPSRTDDRSPWEVASIATAAPPPLPR-----------------PTGAGVAQTPVAVTSTTAGRQQRGNQVQPDGNVSPGRLERATGG-----GGGEYGVDGCRNASKTPAGVAVTHGVGHSGGAGASRPP-PQDDVNYPDTPPPLRRMQRRGSLVNREVPQEDEPKEP-IEPELMIGEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVRAFAG-----------------------------------------------EFYYFVVALHYDIAVTIWSVVAMYIWRELFHQWVYTDD-SKLARAIFRHVNPALECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLIIRSRPPPAXXXXXXXXXXXXXXXXXXXXXXGSIRMSRG----SHAGAGTYRALPRFGGQM---------QKRNSEPMAVPASPRTTVASPKRFSMFEAGRPQV-----EGM-PLANGGXXXXXAGKVPVAKAVSSKASSTLSKL-----VPVAGRAALVSSGRGGAGGGTES----SDARCDDVGTTSSANTSPGRSRVRRRKAGTCVDGVDLS----------------IEVASGGETEA-----TGDTGTEGESPEQPVASKSPSGRDTRIDRARILAQNRSVFTSCSSVASSSNYGDKECGDGVDGEGRQKDQEDTVKGQAARSGE-TKAEKKEKPK----------QEEVLVRTTFCPALEPELLDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKK 1131
BLAST of mRNA_C-linearis_contig73.14952.1 vs. uniprot
Match: A0A6H5JDS1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS1_9PHAE) HSP 1 Score: 694 bits (1792), Expect = 1.690e-221 Identity = 527/1241 (42.47%), Postives = 653/1241 (52.62%), Query Frame = 2
Query: 314 SMVRFGKRRP----TITSPSKTDGNQLSE-EAQAEASARAK---EAPIRGLAMQLSRKSMFSTDTKSSSMPNGHSRNTXXXXXXXXXXXXXXPSHGGXXXXXXXXXXXSSGILGSMFPPSQPRLSFSSSSKAERHAAGVHPAGPTAPASTVASXXDVVSAQTASAVTGPHLPPLPPPVKTATFGLEYVSKSN---QRRQDASSNPSTNPQ--QLEE------------------------------------GSSRPSWPHGPLYPPETPPILHTDQRRSNLVNNNANRDSKETEAKSEPELMIGEIQSIQIADEIALARKALVIIVVSLVGAALVRRFAGPLTEDLNIIEVVGFMSTLLLSFPVIRFTVRLFAYVVTTRASALLYKGNSFYFAVALHQDISMTIWCIVAVAVWSQLFPEWVYSDDRERLPRILYRYGGNVLKCFLAARVGVLVKNFLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYATKGFYNSDDERFAVEMARQGIKEEKNISLYAVSKAMGFIPRNKLGHAFFRELNESDTLDSSKDARTLGMFLFDQLVYRSRPKPVPDHTAPPSPTPTTGRLNAALAKGAATVFGGVVGVGGVGYSVTNALXXXXXXXXXXAAALAANRRPGLPAAFLEPARSRSVSPKRP-----PGSASGSGSVPSGSRHGLTPHAGXXXXXXXXXKVPVVDRLSRKAAAGLGKIRSGTGLSSAGASGSSSSGSIGVVGGVVVVGGVSHRSSGTVAIEANSSTGTIGSLVPSFREG--GGLDGDDDKPAGFRRLGAGGGWVGGLSVIEDNESQAGSAFASARAGARGESASCCGFEESESERPLTG-SYEGQXXXXXXXXXXXXXXXXXXXXXXXXDASAAGRQGEDDAAVRRSEAGGGENVKGRKRHKDKK-----------EXXXXXXXXEEVLLTRETLCPGLEDLLLDVAFKIFDGNGNSSITKEEMVRGVVETFRAHRSLANTLRDSEHIARKLGLIIMWLINVVLFFVWLSIWGADVLSLSLTFASFLIAFSFMIGTAASNLVTAVLFIFVSRLYDVGDRVHIYDGSETVGVKPMNVTVSKIDLRTTSFRRWDEQIFYIPNHLLAAKTIVNIQRTADQWHEFRIQVAASTPSEKLRELQEALKAFAESKDKAEGLYPRTGFALLGIEDSTKLSIRITFRQRANWQ---------NMEKKWACQSMCTWAIKNFCDKIGISYSLPEVPFLMKNK 3805
S R G+RR ++ S+ DG Q+++ A EA+AR K EAPIRGLA Q+SR MFS KS GG +S +G + +QP S V S D S A+++ P PPLP P + S Q+R+ + P++N +LE G S+P P G + P+TPP L QRR +LVN + E EPELMIGEIQSI++ +EIAL R+A+V+I++SLV A LVR FAG L +D+NI EVV F+S LLLSFPVIRFT RLFA+V+TTRAS LLY+GN +YF VALH DI++TIW +VA +W +LF EWVY+DD ++ R ++R+ VL+C LA RVG+L+KN+LVLLVATSYLWRPYLQRVQSSILAQYILLLLTDY TKG+ N D+ FA+EM RQGIKE KNISLYAVSKAMGFIPRNKLGH FFR+L S+TLDSSKDA TLG FLFDQL+ RSRP P T P + G+ + G GVGG ++ A A+ R P P R + RP P + G G +G KVPV +S KA++ L K+ V V G S SSG ++S GT S VP G + + G RR GLS+ + + G A+ G GES E+P+ S G+ ++S G + E G G + +GR++ ++ E +E +L R+T CP LE LLDVAFKIFD + + +ITKEEMV GVV TF+ HRSLA+TL+DSEHIA+KLGLIIM +I +LFFVWLSIWGADV+SLS+TFASFLIAFSFMIGTAASNL++AVLFIFVSRLYDVGDRVHIY GS T G +P NVTV K+DL TT F+RWDEQ +L+ F++SKDK EGLYPR GF+L+ IEDSTKL+IRITFRQR NWQ NMEKKWACQSMCTWAIK+ CD + ISY LPE+P MK K
Sbjct: 80 SGTRCGRRRSVGAMSLRGASRADGAQMADARAAEEATARNKLEQEAPIRGLAKQMSRMDMFSGTKKS----------------------------GGAGTNSWPGHRKTSSGMGFLLSSAQPH-------------------------SRVPSRTDDRSPWEAASMAAPAPPPLPRPTGAGVAQTPVAATSTRAGQQRRGSQGQPASNISAGRLERATGGGGGNSGVDGCRIASKTPAGVAVAHGVGHSVGAGDSQPP-PQGDVNYPDTPPPLRRMQRRGSLVNREVPPEDDLKEP-IEPELMIGEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVREFAGELDKDVNIREVVFFVSLLLLSFPVIRFTARLFAFVITTRASGLLYRGNRYYFVVALHYDIAVTIWSVVARYIWKELFHEWVYTDD-SKMARTIFRHVSPVLECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLIIRSRPPPARPTTKTSPPRKSLAAAFTGAGGGSIRMSRGSHGVGGTYRALPRFGGQMQKRNSESMAVPASPRTP-----VASPKRFSTFDAGRPQVEGMPLAIGGGGGAAAG-------------------KVPVAKAVSSKASSTLSKL-------------------------VPVAGRASLMSSG----RGSASGGTESSDVPGGDAGTTSSANTSPGRSRGRRREARTCVNGVGLSIADGS---GGEMEATGETGTEGESP----------EQPVVSTSPSGRDTRIDRARVLAQNRNVFSSCSSVANSSNYGDK----------ECGDGVDGEGRQQDQEXXXXXXXXXXXXTEAEKKEKPKQEEVLVRKTFCPALEPELLDVAFKIFDLDNSGTITKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTRGEEPTNVTVVKVDLMTTVFKRWDEQA--------------------------------------------SLQEFSKSKDKPEGLYPRMGFSLVRIEDSTKLTIRITFRQRGNWQVGQEAIVVVNMEKKWACQSMCTWAIKSACDSLNISYFLPEIPVQMKEK 1144
BLAST of mRNA_C-linearis_contig73.14952.1 vs. uniprot
Match: D7FX36_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX36_ECTSI) HSP 1 Score: 591 bits (1524), Expect = 3.830e-184 Identity = 434/962 (45.11%), Postives = 519/962 (53.95%), Query Frame = 2
Query: 965 PETPPILHTDQRRSNLVNNNANRDSKETEAKSEPELMIGEIQSIQIADEIALARKALVIIVVSLVGAALVRRFAGPLTEDLNIIEVVGFMSTLLLSFPVIRFTVRLFAYVVTTRASALLYKGNSFYFAVALHQDISMTIWCIVAVAVWSQLFPEWVYSDDRERLPRILYRYGGNVLKCFLAARVGVLVKNFLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYATKGFYNSDDERFAVEMARQGIKEEKNISLYAVSKAMGFIPRNKLGHAFFRELNESDTLDSSKDARTLGMFLFDQLVYRSRPKPVPDHTAPPSPTPTTGRLNAALAKGAATVFGGVVGVGGVGYSVTNALXXXXXXXXXXAAALAANRRPGLPAAFLEPARSRSVSPKRPPGSASGSGSVP-SGSRHGLTPHAGXXXXXXXXXKVPVVDRLSRKAAAGLGKIRSGTGLSSAGASGSSSSGSIGVVGGVVVVGGVSHRSSGTVAIEANSSTGTIGSLVPSFREGGGLDGDDDKPAGFRRLGAGGGWVGGLSVIEDNESQAGSAFASARAGARGES-----ASCCGFEES-----ESERPLTG---SYEGQXXXXXXXXXXXXXXXXXXXXXXXXDASAAGRQGEDDAAVRRSEAGGGENVKGRKRHKDKKEXXXXXXXXEEVLLTRETLCPGLEDLLLDVAFKIFDGNGNSSITKEEMVRGVVETFRAHRSLANTLRDSEHIARKLGLIIMWLINVVLFFVWLSIWGADVLSLSLTFASFLIAFSFMIGTAASNLVTAVLFIFVSRLYDVGDRVHIYDGSETVGVKPMNVTVSKIDLRTTSFRRWDEQIFYIPNHLLAAKTIVNIQRTADQWHEFRIQVAASTPSEKLRELQEALKAFAESKDKAEGLYPRTGFALLGIEDSTKLSIRITFRQRANWQNMEKKWACQSMCTWAIKNFCDKIGISYSLPEVPFLMKNKL 3808
P TPP L+ + R NLV+ + ++ + + +SE ELMIGEI+SIQI DEI LARKALV+I VSLVGA L R FAGP FYF VALHQDISMTIW I ++ VW +LF EWVY D E L YRYG QSSILAQYILLLLTDYAT G N DD++FA+EM R+GIKE++ ISLYAVSKAMGFIPR+KLGHAFFREL ++TL+SS+DA+TLG ++FDQL+ RSR P TAP SP R A LA TV GG GG + NA L A++R LP+++ S+SP + S + P SR G A + P+V R+S K ++ + K+R G +A S G + A +A SS + ++PS + GGG+ AGFR GG LSVIED +S FA + GES ASC E S ++ P G S + + SA G ++ ++ G G DK + EE LLTRETLCP LE +L++AFKIFD N N SITK FVWLSI G DVLSLS+TFASFLIAFSFMIGTAASNL++AVLFIFVSRLYDVGDRVHIYD +T GV+PMNV V K+DLRTTSFRRWDEQIFYIPNHLLA KTIVNIQRTA QWHEF I VAA+T S+KL L +AL+ FA+ KDK EGL+PR GF+L GIEDST+LSIRI FRQR NWQNM+KKWACQSMCTWAIKN CD IGI+Y LPEVP +MKNK+
Sbjct: 241 PATPPQLNATENRPNLVHVHDTKEER-MDTRSETELMIGEIKSIQITDEIVLARKALVLIFVSLVGATLFREFAGPF-----------------------------------------------FYFVVALHQDISMTIWSIASMFVWRRLFAEWVYPTDSE-LSGNAYRYGDEFF---------------------------------QSSILAQYILLLLTDYATTGECNPDDQKFAIEMGRRGIKEQEKISLYAVSKAMGFIPRHKLGHAFFRELGGTNTLNSSRDAKTLGEYMFDQLLLRSRMYS-PGCTAPASPAT---RRWAYLANVGQTVLGGG---GGSNANTLNAKSFRGGR-------LGASKRASLPSSWTA-GDVGSLSPSKRTSSDATLKPAPWLRSRSGAGGRAAGSAPREAGGRSPIVTRVSSKLSSSVNKMRMGPNARAASDS---------------AAGAATATVDTADASDAGSSEIPMDEVLPS-QGGGGM-------AGFREFHGGGKRA--LSVIEDADS-----FADSDPFVGGESKAEVTASCAEMEFSSLRVVDAMAPRYGHDVSELAKETANGGSFSSEDRNDKDAGGASRGEGSAGGTVQKEHEESTNVQSNGSTQKGGDSDEADKPQ--------EEELLTRETLCPMLEHQVLEMAFKIFDLNSNGSITKA-------------------------------------------FVWLSILGFDVLSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVVKVDLRTTSFRRWDEQIFYIPNHLLADKTIVNIQRTAHQWHEFYIHVAATTSSQKLETLHDALQKFAKKKDKPEGLHPRMGFSLTGIEDSTRLSIRIIFRQRGNWQNMDKKWACQSMCTWAIKNACDTIGITYYLPEVPIVMKNKI 1024
BLAST of mRNA_C-linearis_contig73.14952.1 vs. uniprot
Match: A0A835YNP7_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNP7_9STRA) HSP 1 Score: 263 bits (672), Expect = 1.120e-75 Identity = 133/276 (48.19%), Postives = 194/276 (70.29%), Query Frame = 2
Query: 2966 LDVAFKIFDGNGNSSITKEEMVRGVVETFRAHRSLANTLRDSEHIARKLGLIIMWLINVVLFFVWLSIWGADVLSLSLTFASFLIAFSFMIGTAASNLVTAVLFIFVSRLYDVGDRVHIY--DGSETVGVKPMNVTVSKIDLRTTSFRRWDEQIFYIPNHLLAAKTIVNIQRTADQWHEFRIQVAASTPSEKLRELQEALKAFAESKDKAEGLYPRTGFALLGIEDSTKLSIRITFRQRANWQNMEKKWACQSMCTWAIKNFCDKIGISYSLPEVP 3787
++ F +FD + ++ IT EE+V GVV ++ H+SLA TL+DS+ +A KLG ++ I + L F+WL I+G D+ +L+LTFAS L+ S +IG A++NL +++FIFV R +DVGDRV + DG + N V++IDL T FR WDE+++Y+PNH+LA + I+NIQR+ DQWHEF IQV ASTPS+KL EL+ FAE +K G++P FAL G+E++ +L+IR+ FRQ+ NWQ + +KWA QSMCT I N C ++GI+Y+ P++P
Sbjct: 1 MEQVFALFDRDDSNDITHEEVVNGVVNIYKDHQSLALTLQDSQRMAHKLGEVLGAGILIALIFIWLRIFGRDIFALTLTFASVLVGVSVLIGPASANLFASIVFIFVQRPFDVGDRVFHWFPDGRGEM----QNAVVTRIDLLITCFRAWDEKVYYLPNHVLATRPIINIQRSGDQWHEFFIQVLASTPSQKLWELKAKCVEFAEKHNKPSGIHPHIQFALTGVENTNRLTIRVCFRQKGNWQILSRKWAVQSMCTNCIVNSCKELGITYTQPQLP 272
BLAST of mRNA_C-linearis_contig73.14952.1 vs. uniprot
Match: A0A835Z0M4_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M4_9STRA) HSP 1 Score: 229 bits (585), Expect = 7.580e-58 Identity = 255/865 (29.48%), Postives = 387/865 (44.74%), Query Frame = 2
Query: 1256 PVIRFTVRLFAYVVTTRASALLYKGNSFYFAVALHQDISMTIWCIVAVAVWSQLFPEWVYSDDRERLPRILYRYGGNVLKCFLAARVGVLVKNFLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYATKGFYNSDDERFAVEMARQGIKEEKNISLYAVSKAMGFIPRNKLGHAFFRELNES-------DTLDSSKDARTLGMFLFDQLVYRSR---------PKPVPDHTAPPSP-TPTTGRLNAALAKGAATVFGGVVGVGGVGYSVTNALXXXXXXXXXXAAALAANRRPGLPAAFLEPARSRSVSPKRPPGSASGSGSVPSGSRHGLTPHAGXXXXXXXXXKVPVVDRLSRKAAAGLGKIRSGTGLSSAGASGSSSSGSIGVVGGVVVVGGVSHRSSGTVAIEANSSTGTIGSLVPSFREGGGLDGDDDKPAGFRRLGAGGGWVGGLSVIEDNESQAGSAFASARAGARGESASCCGFEESESERPLTGSYEGQXXXXXXXXXXXXXXXXXXXXXXXXDASAAGRQGEDDAAVRRSEAGGGENVKGRKRHKDKKEXXXXXXXXEEVLLTRETLCPGLEDLLLDVAFKIFDGNGNSSITKEEMVRGVVETFRAHRSLANTLRDSEHIARKLGLIIMWLINVVLFFVWLSIWGADVLSLSLTFASFLIAFSFMIGTAASNLVTAVLFIFVSRLYDVGDRVHIYDGSETVGVKPMNVTVSKIDLRTTSFRRWDEQIFYIPNHLLAAKTIVNIQRTADQWHEFRIQVAASTPSEKLRELQEALKAFAESKDKAEGLYPRTGFALLGIEDSTKLSIRITFRQRANWQNMEKKWACQSMCTWAIKNFCDKIGISYSLPEVPFLMK 3799
P+ F RLFAY+ T S +L++ N+ YF VALHQ+++ + + +A W Q W+ ++ Y N + C LAA V V ++NF +LL+A+++LW PYL+R QSSI AQY+LL+LT+Y + G N++ E A ++A + + K +SLYAV K++ F+ +K+G + F+EL + DT+D+S+ AR LG +L+ +L +R P P P L+ L + T XXXXXXXXXX P A S++ P S +G+ G P X V L +A I G ++ NS+ VP+ +PA EG XXXXXXXXXXXXXXXXXXX AA EN E + CP + L AF +FD + +TK+++++GVV ++ H++LA TL DS+ + KLG II L++ V+ F+WLSIWG LS+S+TF+SFL++F+FM G+ A+ LV +++F+FV+ YDVGDR+ I D +T V KI+L TT F R D Q +PN LL+ ++N+QR+ + W EF + V+A+TP KL L+ ++ FA + + G+Y + GF I+DS KL +RI + R NW +++++W + AI + C ++GI+++ P ++K
Sbjct: 254 PLFNFLARLFAYLSITSTSRILFRFNALYFVVALHQELTNILVFGLLLAEWEQ----WIQPLVIDKA----YSAVHNTILCLLAAAVAVFLRNFTLLLIASTHLWLPYLERTQSSIFAQYVLLILTEYCSTGIINAEFEALASQIAAKTARWSK-LSLYAVYKSVSFVQHHKVGGSVFKELGLNAEGDGGEDTIDNSRQARALGEYLYKRLGDAARAGTWQPPYKPXXXXXXXXPRRAYLPIQSLLHGHLGSKSTTACHHTSLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--LRRTASEASLALSSPGSPRSRAGTKDDGPCLSPPPLLAQPLPLPLXPSVTAAP-LQPQAPPPPSPILHGL----------------------------------LASLRRNSN-------VPA-----------PQPAXXXXX---------------------------------------------XXXXXXXKQEGTPPTSPXXXXXXXXXXXXXXXXXXXXXMAA------------------ENA-------------------ELPNIELAKFCPAMSTTLRPHAFALFDKEQHGVVTKDDLLQGVVSIYKDHKNLARTLADSQQMVNKLGQIIGALMSFVMIFIWLSIWGYQFLSISITFSSFLLSFTFMFGSTATALVESIIFVFVTSAYDVGDRLMIPDIMQTSRYHGCKVV--KINLLTTVFERGDGQSLIMPNKLLSQMALINLQRSGNMWFEFVVGVSATTPLHKLHSLKGRMQKFA--NEDSSGIYHKIGFTFTEIQDSAKLVVRINVQGRFNWGDVKRRWEVHNATCQAIAHHCAELGITFTPPVQHHMVK 968
BLAST of mRNA_C-linearis_contig73.14952.1 vs. uniprot
Match: A0A835YNU8_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.020e-36 Identity = 211/838 (25.18%), Postives = 339/838 (40.45%), Query Frame = 2
Query: 1328 GNSFYFAVALHQDISMTIWCIVAVAVWSQLFPEWVYSDDRERLPRILYRYGGNVLKCFLAARVGVLVKNFLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYATKGFYNSDDERFAVEMARQGIKEEKNISLYAVSKAMGFIPRNKLGHAFFRELNESDTLDSSKDARTLGMFLFDQLVYRSRPKPVPDHTAPPSPTPTTGRLNAALAKGAATVFGGVVGVGGVGYSVTNALXXXXXXXXXXAAALAANR---RPGLPAAFLEPARS-RSV--SPKRPPGSASGSGSVPSGSRHGLTPHAGXXXXXXXXXKVPVVDRLSRKAAAGLGKIRSGTGLSSAGASGSSSSGSIGVVGGVVVVGGVSHRSSGTVAIEANSSTGTIGSLVPSFREGGGLDGDDDKPAGFRRLGAGGGWVGGLSVIEDNESQAGSAFASARAGARGESASCCGFEESESERPLTGSYEGQXXXXXXXXXXXXXXXXXXXXXXXXDASAAGRQGEDDAAVRRSEAGGGENVKGRKRHKDKKEXXXXXXXXEEVLLTRETLCPGLEDLLLDVAFKIFDGNG----NSSITKEEMVRGVVETFRAHRSLANTLRDSEHIARKLGLIIMWLINVVLFFVWLSIWGADVLSLSLTFASFLIAFSFMIGTAASNLVTAVLFIFVSRLYDVGDRVHIYDGSETVGVKPMNVTVSKIDLRTTSFRRWDEQIFYIPNHLLAAKTIVNIQRTADQWHEFRIQVAASTPSEKLRELQEALKAFAESKDKAEGLYP----RTGFALLGIEDSTKLSIRITFRQRANWQNMEKKWACQSMCTWAIKNFCDKIGISYSLPEVPFLMK 3799
N YF V LH + +W + W E+ + +E R + G VL C++ +R+ L+ +L +A Y+WRPYL+RVQ++I AQY++L+LTDY+ N D+ A++ + +K +S+YA+S+AMGFIP+NKL H F S +DS + AR LFD+LV + P + + P T K G T + ++ +R G+ AA L A S SV +P++ S + + +V + S XXXX XXX VDR S +S ++S GS + GG + KP + L A +D ++ AF + ES R E A + EDD A +K D+ + LT L P + L + DG+ ++ IT+ + +V ++ RSLA TL+D E I KLG +I + + + FV+L I+ ++L L +T+ S ++AFSF+ G++A+N + +FIFV+R YDVGDRV+I D N V +I++ TT FRRWD+ +PN LA + I N++R+ D + V+ +TP KL L+E ++ +A + LY + + T + + + Q+ +WQ+ K + + + C ++G+ Y+LP +K
Sbjct: 383 SNHVYFFVRLHYASAQLMWAVFIYLFWKYGLAEYKSPNMQESTDRAV----GRVLACYMVSRIVYLLNKMSLLELANRYMWRPYLERVQANIFAQYVILILTDYSLGYVRNDQDQYIALQFSENQGNWDK-MSMYAISRAMGFIPKNKLRHPVFAGSAGSVAMDSKRSARMFAGLLFDRLV--NGPLDLARNDGPAPATXXXXXXXXXXPKSPPAELGSPPRARDA--DTTGGVRRRSPSPARRVSSPPQSRGVVEVGVDAAVLRAAPSLHSVQEAPRQRGNSTTATAAVNASSHXXXX-----XXXXLXXXXXXXVDRXXXXXXXXXXXXXXXK---------------------------ESLSNSDAKYARGSTSGDRRGSKASTQGTGGVRHWNALKPPERKSLAA--------EPFQDRGAEIRDAFTD---------------DAEESHRDTLKRLEAAHLREQMRKRALGLRL-----------ETAIEENEDDQAEEAVRPYSVAELKSPDESDDEDDPSPPKT------LTLWMLRPVMIKQLAVKTMALLDGDTAVACDAEITRHKFQNAMVTIYQQRRSLALTLKDYESILIKLGYVISLVWSFIALFVFLWIFDQNILGLGVTWVSLVVAFSFLFGSSAANFFESCVFIFVTRAYDVGDRVYIKDELNDEA----NYVVQRINMLTTVFRRWDDHYTILPNQQLAKREIRNMRRSGDGVMLMTLLVSIATPRAKLEALKERMQEYARAVTGP--LYSCDPNSVDYCCRRVISCTNMEVFFVYSQKGSWQDNYLKVKNFHLMSLRLAEVCHELGLEYALPTQGVTLK 1133
BLAST of mRNA_C-linearis_contig73.14952.1 vs. uniprot
Match: A0A0L0H4I0_SPIPD (EF-hand domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H4I0_SPIPD) HSP 1 Score: 143 bits (360), Expect = 1.350e-30 Identity = 91/269 (33.83%), Postives = 148/269 (55.02%), Query Frame = 2
Query: 2975 AFKIFDGNGNSSITKEEMVRGVVETFRAHRSLANTLRDSEHIARKLGLIIMWLINVVLFFVWLSIWGADVLSLSLTFASFLIAFSFMIGTAASNLVTAVLFIFVSRLYDVGDRVHIYDGSETVGVKPMNVTVSKIDLRTTSFRRWDEQIFYIPNHLLAAKTIVNIQRTADQWHEFRIQVAASTPSEKLRELQEALKAFAESKDKA-EGLYPRTGFALLGIEDSTKLSIRITFRQRANWQNMEKKWACQSMCTWAIKNFCDKIGISYSLP 3778
AF D +GN SIT++E+ V+ +R R L +RD KL ++ + V F + L I+G L+ L F SF++A SF+ GTAA ++LF+F++ YD GDRV I + N+ V ++ + TT F+R D Q+ Y PN L+A+K I N++R+ DQ +Q+ TP EKLR L+E + F +S+ + +G+ + IE+ KL + + + + NWQ+ K+W ++M +A+K ++GI Y+ P
Sbjct: 646 AFAALDQDGNGSITRKEVKEVVIGMYRERRRLFRAMRDLSQALGKLNTFFYFVTSFVTFCIALPIFGIS-LTAMLPFTSFILALSFVFGTAARTAFESLLFLFLTHPYDAGDRVVIDN---------QNLLVEEVGVLTTVFKRLDGQLIYAPNTLVASKLIHNLRRSGDQSESIELQLNFDTPEEKLRALKERMIDFVKSEPREFQGV---CDIHISEIENLNKLKVNVILKHKGNWQDGSKRWNRRTMFMFALKKNLLELGIRYATP 901
BLAST of mRNA_C-linearis_contig73.14952.1 vs. uniprot
Match: A0A6H5JSR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR3_9PHAE) HSP 1 Score: 142 bits (358), Expect = 2.760e-30 Identity = 97/277 (35.02%), Postives = 155/277 (55.96%), Query Frame = 2
Query: 2981 KIFDGNGNSSITKEEMVRGVVETFRAHRSLANTLRDSEHIARKLGLIIMWLINVVLFFVWLSIWGADVLSLSLTFASFLIAFSFMIGTAASNLVTAVLFIFVSRLYDVGDRVHIYDGSETVGVKPMNVTVSKIDLRTTSFRRWDEQIFYIPNHLLAAKTIVNIQRTADQWHEFRIQVAASTPSEKLRELQEALKAFAES-----KDKAEGLYPRT-GFALLGIEDSTKLSIRITFRQRANWQNMEKKWACQSMCTWAIKNFCDKIGISYSLPEVPFL 3793
++F+ +T++E V V+ F RSL TL D E I +K+G ++ + VV+FFV L I G D+ SL LT+ S +AFSF+ G++AS +++F+FV++ YDVGD V+ D +T G VT +I++ TT FRRWD Q I N+++A K I N R++ H I V+ TP EKL +++ + A + GL P T + + G+ D +LS+ + +QR N NM +++ ++ + C++ GISY+LP P +
Sbjct: 734 ELFEVPPEGVVTRKEFVDRTVDIFVQRRSLQLTLGDYEAILKKVGYLLSVVSAVVVFFVALRILGYDIGSLVLTWLSLAVAFSFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVD--DTGGEDWYIVT--RINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHCHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVVCQQRENSANMGRRFGNSNLFHKLLARECNRHGISYTLPAQPLV 1006
BLAST of mRNA_C-linearis_contig73.14952.1 vs. uniprot
Match: A0A058ZGC3_FONAL (EF-hand domain-containing protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZGC3_FONAL) HSP 1 Score: 142 bits (357), Expect = 7.010e-30 Identity = 90/281 (32.03%), Postives = 152/281 (54.09%), Query Frame = 2
Query: 2924 LTRETLCPGLEDLL-LDVAFKIFDGNGNSSITKEEMVRGVVETFRAHRSLANTLRDSEHIARKLGLIIMWLINVVLFFVWLSIWGADVLSLSLTFASFLIAFSFMIGTAASNLVTAVLFIFVSRLYDVGDRVHIYDGSETVGVKPMNVTVSKIDLRTTSFRRWDEQIFYIPNHLLAAKTIVNIQRTADQWHEFRIQVAASTPSEKLRELQEALKAFAESKDKAEGLYPRTGFALLGIEDSTKLSIRITFRQRANWQNMEKKWACQSMCTWAIKNFCDKIGI 3763
LTRE LE + D AF +FD + + I + +M + +R ++L+N+LRDS + L + ++ V L F +L I+G ++ S + AS +++ SF+ G +A + V+++FV YDVGDRV I D N V+++++ T FRRWDEQ F+IPNH+L K ++NI+R+ +Q H F + + A T SE+L L+ ++ + ES+ E F L ++ ++ + IT Q +NWQ+ +W ++ C ++GI
Sbjct: 1996 LTREDFSLFLEPSVNTDEAFALFDIHSSGQIRRRDMKEALQNIYRERKNLSNSLRDSGTMVNTLDRFVSLMLLVCLLFAFLLIFGTNIESTVVPVASLIVSMSFIFGHSAQRMFDNVIYLFVEHPYDVGDRVFIDDH---------NFIVARMNITATVFRRWDEQYFWIPNHILTDKVVINIRRSGNQRHTFYMFLDADTTSEQLGTLRGMMQGWVESQP--ERFARDVDFILFDVDTHGRMQMLITIGQLSNWQDGAVRWKNRTDSWLFFLQSCRELGI 2265 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig73.14952.1 >prot_C-linearis_contig73.14952.1 ID=prot_C-linearis_contig73.14952.1|Name=mRNA_C-linearis_contig73.14952.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1223bp MLSPGGTPCSHRPREESGPQQQQQQQQLDADQSERTAAAGICSSAAPLHRback to top mRNA from alignment at C-linearis_contig73:311834..325241+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig73.14952.1 ID=mRNA_C-linearis_contig73.14952.1|Name=mRNA_C-linearis_contig73.14952.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=13408bp|location=Sequence derived from alignment at C-linearis_contig73:311834..325241+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig73:311834..325241+ >mRNA_C-linearis_contig73.14952.1 ID=mRNA_C-linearis_contig73.14952.1|Name=mRNA_C-linearis_contig73.14952.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7338bp|location=Sequence derived from alignment at C-linearis_contig73:311834..325241+ (Chordaria linearis ClinC8C monoicous)back to top |