mRNA_C-linearis_contig73.14946.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig73.14946.1 vs. uniprot
Match: D7FX27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX27_ECTSI) HSP 1 Score: 949 bits (2454), Expect = 0.000e+0 Identity = 643/1056 (60.89%), Postives = 719/1056 (68.09%), Query Frame = 1
Query: 49 MLLLAFPALEGSLCCLGSGDWPLDPHEILLHPQDLEKLRVPAFGYVAIHRNSSSSSGTGTASTGNGIPGYQRPRSAIGRGTEAGYGTTRPARGEEDEEPLTFCRAVPDDSLSPGETRAPAWLLGAANVRPRQHLSVRCAPEVGLGKGTTVLGAQAGGGQHSPSSFRVDLSFASDQQLREGGKDAARNGYRDSSSAD---------------IKARAIARRVSGCMVGSGSLLAAEVLGETVVVRVAAIATTSDRRSDNDTDRSSHSNSDAVDANFSPLQRNFLITSPSQVSFVRANEDEAYEC------GAPT----ERTRHRRP--------SAGCGEGRKVWARRAPGLEAALAELQDLVLLSVGGWGSGSSSVSSSSSCWRDVLPAGIVVCGPSGVGKTLALDILTENLREVHGVHVIRLLGPQILSGVAQGGDGAGGGRGGRPGDNAASSLLQGPLGLSLAEARARAPSVIVLDELDALFDSCGGGDEGGRADDPLGEGVRANAALLEMIDRASVMEGVTVLGATRRSPGGKGGAGWTELETGAGGG---ATLPAAFRKPGRFDRCVAVGPPSQAQRERILRVLLSSSEGAQGWELEPLEIAIA--PAADSLADETTPRGGVESELKESRQPLVESRGGRRSETLHAE---ARGSREVGRRSSRESPEGAAE--AARRRGQRNKAGEAADGTLAEWAKRLSSVTPGMVGGDLERLVRTAQARSAQRRR--TSEPRVPPLLPNTLSWQDAMGAVAVTVPRSLRGLDVAFSGSSGDGVGGG------APTWASVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLHGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRGDGXXXXXXXXXXXX-SVHARVLSTLLNEMDGVAS---TSAXXXXXXXXXXXXXXXXXXXAATNRRDALDAALLRPGRLHESVELGVPAREDREGVLRVHAGCLPL-AAGVDLARLSQDDVSGGLTCADVEASCRDAAMMAVREDLHGAREAS 3048
MLLLAFP+ EGS CCLGSGDWPLDPHEIL+HPQDLE LRVP FGYVA++RN+ S G +S G R ++PL +CRAVPDDSL+PGETRAPAWLL AA V+PRQHLS+ EV + V QH RV L+ + R+G +DA+ G R S + + +RAIARRVSGCMV GSLLAAEVLGETV++RV I S N D DA SP++R +I S ++V+ V E E G P E++R RRP + GC E WAR+APGLEAAL+EL+ LVLLSVGG SS W VLPAG+ +CGPSGVGKTL+LD+L E+L E HGVHVIRLLGPQIL+G QGG +AASS LQGPLGL+L+EARARAPSV+V DELDALFD+CGGGDEGG PLGEG RANAALLE +DRAS ++GV VLGATRRSPGGKGGAGW LE G GGG A LPAAFRKPGRFDRCVA+GPP+QAQRE IL ++LS+ GA ELEPL A+ P A S DE + V +++ P +E R T+ A+ ARG R GR SS G AE EWAKRLSS+TPGMVGGDLERLVRTA+ARS QR R + P P L W+D M AVA+TVPRSL+GLDVA +GS PTW SVGGFS+AKRRLQRLVQWPWLHPEAFARMGVSAPAGALL+GPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRGDG XXXXXXXXXXX SVHARVLSTLLNEMDGVAS XXXXXXXXXXXXXXXXXXXAATNRR ALDAALLRPGRLHESVELG P REDREGVLRVHAG LP AAG+DLARLSQDDVSGGLTCAD+EA+CR+AAMMA+REDLHGARE S
Sbjct: 1 MLLLAFPSSEGSSCCLGSGDWPLDPHEILVHPQDLEHLRVPGFGYVAVNRNNGS--GDADSSRSKGXXXXXXXXXXXXXXXXXXXXXXXXXR----QKPLAYCRAVPDDSLAPGETRAPAWLLSAAGVQPRQHLSISRPSEVQEAENLAVPLGGDDQQQHHLPRVRVGLAL----EHRQGEEDASA-GNRPSPAGNGIISQNVRSGGYVSKCDSRAIARRVSGCMVRDGSLLAAEVLGETVLMRVMGI---------------SCGNDDGGDA--SPVKRPLIINSGTKVALVGPQEQERSRSSPVSWDGQPVSPGGEQSRRRRPRRRPQQQATKGCTE---TWARQAPGLEAALSELRALVLLSVGG---------SSGGAWSGVLPAGVALCGPSGVGKTLSLDLLAEDLSENHGVHVIRLLGPQILAGSGQGGXXXXXXXXXXXA-SAASSPLQGPLGLALSEARARAPSVLVFDELDALFDACGGGDEGGDTA-PLGEGARANAALLEALDRASAIKGVAVLGATRRSPGGKGGAGWVGLEEGEGGGGDGAALPAAFRKPGRFDRCVAIGPPTQAQREGILSMVLSTVAGAAELELEPLSTALQARPIAGSPPDEMSSGKPVVIASRDA--PDLEPE--REPRTIFADKDDARGGRGEGRGSS-----GRAERKTXXXXXXXXXXXXXXXAIAEEWAKRLSSLTPGMVGGDLERLVRTARARSLQRGRDLAGQQTTQPSPPRFLMWEDVMAAVAITVPRSLQGLDVASAGSXXXXXXXXXXXXXRGPTWRSVGGFSKAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRGDGGXXXXXXXXXXXGSVHARVLSTLLNEMDGVASGXXXXXXXXXXXXXXXXXXXXXXXXAATNRRGALDAALLRPGRLHESVELGFPGREDREGVLRVHAGRLPRGAAGIDLARLSQDDVSGGLTCADLEAACREAAMMAMREDLHGAREMS 1005
BLAST of mRNA_C-linearis_contig73.14946.1 vs. uniprot
Match: A0A7S2GUQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUQ8_9STRA) HSP 1 Score: 225 bits (574), Expect = 3.800e-62 Identity = 144/336 (42.86%), Postives = 193/336 (57.44%), Query Frame = 1
Query: 2020 AKRLSSVTPGMVGGDLERLVRTAQARSAQRRRTSEPRVPPLLPNTLSWQDAMGAVAVTVPRSLRGLDVAFSGSSGDGVGGGAPTWASVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLHGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRGDGXXXXXXXXXXXXSVHARVLSTLLNEMDGVASTSAXXXXXXXXXXXXXXXXXXXAATNRRDALDAALLRPGRLHESVELGVPAREDREGVLRVHAGCLPLAAGVDLARLSQDDVSGGLTCADVEASCRDAAMMAVREDL 3027
A L+ +TPGMV GDL +L AQ + R+ + W+ + A+ P+ LR LDV SG + W S+ G+ K RL+R++ PW +PE + +M + A +G +L GPSGCGKSL AQVLA E ANF+WV+SSELLS++LGE+E +LR+LF RAR AAP ILFLDE+DA+ RG G +V +R+L+TLLNE+DG+ T++ AATNR + LDAALLRPGRL E VELG+P+ DR VL L L++ VDL L+ V G TCA + + RDA + A+R L
Sbjct: 33 AWELAEMTPGMVIGDLVQLCDAAQMEAMDLERSCS--------GGVEWKHLLRALETVPPQQLRELDV----RSGQAMAREGICWDSIAGYDAVKDRLRRVIAGPWENPELYEQMSLGAVSGVVLTGPSGCGKSLTAQVLAAEIRANFIWVKSSELLSKWLGESERQLRSLFDRARKAAPAILFLDEVDALVG-RGKGS-----------NVASRLLTTLLNELDGIKGTTSQSRVLVL------------AATNRIEVLDAALLRPGRLSEIVELGLPSVTDRVAVLEHATKGLRLSSDVDLKDLASSKV--GATCAGLMSLSRDAGLAALRRCL 330
BLAST of mRNA_C-linearis_contig73.14946.1 vs. uniprot
Match: A0A836CCE4_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE4_9STRA) HSP 1 Score: 228 bits (582), Expect = 3.380e-57 Identity = 169/426 (39.67%), Postives = 212/426 (49.77%), Query Frame = 1
Query: 1987 GEAADGTLAEWAKRLSSVTPGMVGGDLERLVRTAQARSAQRR------------------------------RTSEPRVPPLLPNTLSWQDAMGAVAVTVPRSLRGLDVAFSGSSGDGVGGGAPTWASVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLHGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRGDGXXXXXXXXXXXXSVHARVLSTLLNEMDGVASTSAXXXXXXXXXXXXXXXXXXXAATNRRDALDAALLRPGRLHESVELGVPAREDREGVLRVHAGCLPL-------------------------------------------------AAGVDLARLSQDDVSGGLTCADVEASCRDAAMMAVREDL 3027
G++ +G A WA RL+ TPG GGD RL+R A+A + RR RTS+ L W D A+A P L+G++ S G G W +VGG+ K RL RL RM +++ +GALL GPSGCGK+LVA LA EC ANF+ VRSS LLS Y GE+E +R LF RARAAAP ILFLDE+DA+TA RG XXXXXXXX V R+LSTLLNEMDGV ATNR +A+D+ALLRPGRLHE+V +G+P +DR +LR++ +PL AA L L+ D VSGG+TCA +EA+CR+AAMMA+RED+
Sbjct: 1369 GDSEEGAEARWAGRLADATPGFTGGDARRLLRAARAEAQARRHARGGASCDXXXXXXXXXXXXXXXXXXXSRRTSDGDA------ELCWSDLEHALARVAPSELQGVEGGVLPSGGRGXX--XXXWGTVGGYQGVKERLARL------------RMSLTSVSGALLEGPSGCGKTLVAHALAGECRANFIAVRSSGLLSPYFGESEENVRRLFRRARAAAPSILFLDEIDALTAARGASXXXXXXXXD---EVQLRLLSTLLNEMDGVGHAGGDGRVLVL------------GATNRPEAIDSALLRPGRLHEAVHIGMPDAQDRLDILRLYTSRMPLRSEGGDIFKVEVAXXXXXXXXXXXXXSPDHQAQIVAGXXXXXGKQPHAEAANAVLQELASDGVSGGMTCAGLEAACREAAMMALREDM 1759
BLAST of mRNA_C-linearis_contig73.14946.1 vs. uniprot
Match: T0QNW0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNW0_SAPDV) HSP 1 Score: 215 bits (548), Expect = 6.150e-55 Identity = 141/353 (39.94%), Postives = 196/353 (55.52%), Query Frame = 1
Query: 2020 AKRLSSVTPGMVGGDLERLVRTAQARSAQRRRTSEPRVPPLLPNTLSWQDAMGAVAVTVPRSLRGLDVAFSGSSGDGVGGGAPTWASVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLHGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRGDGXXXXXXXXXXXXSVHARVLSTLLNEMDGVASTSAXXXXXXXXXXXXXXXXXXXAATNRRDALDAALLRPGRLHESVELGVPAREDREGVLRVHAGCLPLAAGVDLARLS------QDDVS-----GGLTCADVEASCRDAAMMAVREDLHGAREA 3045
A R++ T G V DL R+ R A A S + T+ WQD + A+ VT P L+ L+V G++ +W G+S K RL L+ + + EA A +GV + +G LL+GPSGCGK+ + + LA +C ANF+ V+SS+LLS+Y GETE +R +F+RARA+APCILF DELDAI KR SV+ARVLSTLLNEMDGV ++ AATNR+DALDAAL+RPGR+ +++E+G P + DR + + +PLA VD+A L+ + D+S +T AD+ A C+ AA A+R D+ A A
Sbjct: 396 AHRVALATGGYVAKDLVRVCRYALASSKLQEAP-----------TVVWQDFVKALGVTTPSQLQTLNVQAPGAA-------LASWTLFAGYSALKNRLLELISYRFERKEALAALGVQSVSGILLYGPSGCGKTTLVRGLAAKCNANFVRVQSSDLLSKYFGETEKSIRDVFARARASAPCILFFDELDAIAEKRA----FDSSGGGSSSSVYARVLSTLLNEMDGVGGQASEVIVM--------------AATNRKDALDAALVRPGRIDQALEVGYPDQNDRLAIFESYTRRMPLAEDVDVAALASTPFDLRSDLSKMERAAHMTGADIGAICKAAAFHALRHDVDAASVA 712
BLAST of mRNA_C-linearis_contig73.14946.1 vs. uniprot
Match: A0A0C3APB4_9AGAM (Uncharacterized protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3APB4_9AGAM) HSP 1 Score: 214 bits (546), Expect = 7.790e-55 Identity = 132/343 (38.48%), Postives = 195/343 (56.85%), Query Frame = 1
Query: 2011 AEWAKRLSSVTPGMVGGDLERLVRTAQARSAQRRRTSEPRVPPLLPNTLSWQDAMGAVAVTVPRSLRGLDVAFSGSSGDGVGGGAPTWASVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLHGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAI-TAKRGDGXXXXXXXXXXXXSVHARVLSTLLNEMDGVASTSAXXXXXXXXXXXXXXXXXXXAATNRRDALDAALLRPGRLHESVELGVPAREDREGVLRVHAGCLPLAAGVDLARLSQDDVSGGLTCADVEASCRDAAMMAVREDLHGA 3036
+E + ++S T G VG DL LVR A + +R +S+ P LP L++ D + A+ T P +LR L + S W+ +GG S + RL+ ++WP LH E F+R+GV+ G LL+GP GC K+L A+ LATE NFL V+ ELL++++GE+E +R +F++ARA APCI+F DE+DA+ TA+ DG H VL+++LNEMDG+ AATNR D +D+AL+RPGRL + +G P RE +LR+ + L GVD ARL+ ++ G + A++ A C++AAMMA+RE++H A
Sbjct: 362 SEELRTIASQTHGYVGADLAGLVREAGTLAIKRVISSD--ATPALPQLLTYADFLQALPHTRPSALRSLILETPHVS----------WSDIGGVSHVRERLREAIEWPLLHAETFSRLGVTPTKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPELLNKFVGESERAVREVFAKARAGAPCIVFFDEIDALGTARSEDGRT----------GAHEGVLTSMLNEMDGIQDLHGVIVV---------------AATNRPDVMDSALMRPGRLDRILYVGPPDAPGREEILRIRTRKMALGHGVDFARLAS--MTDGCSGAELAAMCQEAAMMAMRENIHAA 665
BLAST of mRNA_C-linearis_contig73.14946.1 vs. uniprot
Match: A0A7J2KEJ1_9CREN (AAA family ATPase n=1 Tax=Acidilobales archaeon TaxID=2268176 RepID=A0A7J2KEJ1_9CREN) HSP 1 Score: 209 bits (533), Expect = 1.210e-54 Identity = 134/342 (39.18%), Postives = 191/342 (55.85%), Query Frame = 1
Query: 2023 KRLSSVTPGMVGGDLERLVRTAQARSAQRRRT-----SEPRVPP--LLPNTLSWQDAMGAVAVTVPRSLRGLDVAFSGSSGDGVGGGAPTWASVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLHGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRGDGXXXXXXXXXXXXSVHARVLSTLLNEMDGVASTSAXXXXXXXXXXXXXXXXXXXAATNRRDALDAALLRPGRLHESVELGVPAREDREGVLRVHAGCLPLAAGVDLARLSQDDVSGGLTCADVEASCRDAAMMAVREDL 3027
K+L+ +T G G DL L R A A +A RR ++ R+PP L ++ QD + A +P LR + V W +G EAK++L+ V+WP HPEAF R+G+ P G LL GP GCGK+L+A+ +ATE ANF+ V+ E+LS+++GE+E +R +F RAR AAPCI+F DE+DAI RG G V RV+S +L EMDG+ AATNR D +D ALLRPGRL + + + P + R + +VH +PL+ VDL RL++ ++ G T AD+EA+CR+AA+MA+RE++
Sbjct: 160 KKLAEMTHGYTGADLAALCREA-AMNALRRYLPQIDLTKDRIPPEILEKMEVTMQDFLNAYKEVIPSGLREVYVEVP----------EVRWDDIGDLEEAKQQLRETVEWPLKHPEAFRRLGIKPPRGILLFGPPGCGKTLLAKAVATESGANFISVKGPEVLSKWVGESERAIRLIFRRARQAAPCIIFFDEIDAIAPVRGAGIGDSH--------VTERVVSQILTEMDGIEKLE---------------NVVIIAATNRPDIIDPALLRPGRLDKLIYVPPPDIKGRYEIFKVHTRKMPLSEDVDLWRLAE--LTEGYTGADIEAACREAALMALRENI 465
BLAST of mRNA_C-linearis_contig73.14946.1 vs. uniprot
Match: A0A6A3K5S7_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3K5S7_9STRA) HSP 1 Score: 216 bits (549), Expect = 2.080e-54 Identity = 140/340 (41.18%), Postives = 195/340 (57.35%), Query Frame = 1
Query: 2020 AKRLSSVTPGMVGGDLERLVRTAQARSAQRRRTSEPRVPPLLPNTLSWQDAMGAVAVTVPRSLRGLDVAFSGSSGDGVGGGAPTWASVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLHGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRGDGXXXXXXXXXXXXSVHARVLSTLLNEMDGVAS---TSAXXXXXXXXXXXXXXXXXXXAATNRRDALDAALLRPGRLHESVELGVPAREDREGVLRVHAGCLPLAAGVDLARLSQDDV-SGGLTCADVEASCRDAAMMAVREDL 3027
A RL+S+T G V DL R+ R A +AQ S L P+ + W + + A P LR L+VA G+ DG G++ +++L V W + +A R+G+S +G LL GPSGCGK+L+ Q LA + NF+ V+SSELLS+Y G++E +R LF+RARAAAPCILF DE D+I KR G V+ARVLST LNEMDGV S T++ AATNR++ALDAAL+RPGR+ ++VELG P +ED + + ++ +PLAA VD+ L++ S T AD+ A+C++AA A+RED+
Sbjct: 483 ASRLASLTGGYVAKDLVRICRNA---AAQAHADSIDNGGSLKPS-VGWTELLHAQQQVKPSQLRELNVASPGAPVDGK-------LVFAGYAAVQKQLFDFVSWKFHPTDAMNRLGISNASGILLSGPSGCGKTLLVQTLAAKAQVNFVSVKSSELLSKYFGDSEKAVRQLFARARAAAPCILFFDEFDSIAHKRSFGEGDGGSSGG---GVYARVLSTFLNEMDGVGSQRVTTSSVSHAKGSSASESGGILVIAATNRKNALDAALIRPGRIDKTVELGFPTQEDIQEIFTLYTRKMPLAADVDIQALAERPRGSRAFTGADIAATCKEAAFRALREDI 808
BLAST of mRNA_C-linearis_contig73.14946.1 vs. uniprot
Match: A0A1W0A8A1_9STRA (Cell division cycle protein 48 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8A1_9STRA) HSP 1 Score: 213 bits (543), Expect = 3.100e-54 Identity = 137/359 (38.16%), Postives = 201/359 (55.99%), Query Frame = 1
Query: 2020 AKRLSSVTPGMVGGDLERLVRTAQARSAQRRRTSEPRVPPLLPNTLSWQDAMGAVAVTVPRSLRGLDVAFSGSSGDGVGGGAPTWASVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLHGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRG-DGXXXXXXXXXXXX----------SVHARVLSTLLNEMDGVASTSAXXXXXXXXXXXXXXXXXXXAATNRRDALDAALLRPGRLHESVELGVPAREDREGVLRVHAGCLPLAAGVDLARLSQD------DVS-----GGLTCADVEASCRDAAMMAVREDLH 3030
A R+++VT G V DL R+ R A+A S + + P + W D + A+ T P L+ L+V G++ TW G+ K++L L+ + + EA +GV + +G LL+GPSGCGK+++ Q LA +C ANF+ V+SSEL+S+Y GETE +R +F+RAR+AAPCILF DELD+I KR DG SV++RVLSTLLNEMDGV+ +A AATNR+DALD AL+RPGR+ +++E+G P++EDR + + + +P + VD+ +L+ D+S +T AD+ A C+ AA A+REDL+
Sbjct: 390 AARVANVTGGYVAKDLVRVCRHAKASS---KLANMPEI--------RWLDFVKAIGNTKPSQLKTLNVQAPGTA-------LQTWEQFAGYESLKKKLLELISYRFERKEALRTLGVQSVSGILLYGPSGCGKTMIVQGLAAKCKANFVRVQSSELMSKYFGETEKSIRDVFARARSAAPCILFFDELDSIAEKRAFDGKTHFLIHVLIILIGKDSGGGASSVYSRVLSTLLNEMDGVSGQTAEVIVM--------------AATNRKDALDPALIRPGRIDQALEVGYPSKEDRAAIFKSYMARMPRSNDVDIHKLASTAFDMSLDMSKMKRGNAMTGADIGAICKAAAFQALREDLN 716
BLAST of mRNA_C-linearis_contig73.14946.1 vs. uniprot
Match: A0A257A602_9CREN (AAA family ATPase (Fragment) n=2 Tax=Thermoprotei TaxID=183924 RepID=A0A257A602_9CREN) HSP 1 Score: 211 bits (536), Expect = 4.830e-54 Identity = 134/342 (39.18%), Postives = 191/342 (55.85%), Query Frame = 1
Query: 2023 KRLSSVTPGMVGGDLERLVRTAQARSAQRRRT-----SEPRVPP--LLPNTLSWQDAMGAVAVTVPRSLRGLDVAFSGSSGDGVGGGAPTWASVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLHGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRGDGXXXXXXXXXXXXSVHARVLSTLLNEMDGVASTSAXXXXXXXXXXXXXXXXXXXAATNRRDALDAALLRPGRLHESVELGVPAREDREGVLRVHAGCLPLAAGVDLARLSQDDVSGGLTCADVEASCRDAAMMAVREDL 3027
K+L+ +T G G DL L R A A +A RR ++ R+PP L ++ QD + A +P LR + V W +G EAK++L+ V+WP HPEAF R+G+ P G LL GP GCGK+L+A+ +ATE ANF+ V+ E+LS+++GE+E +R +F RAR AAPCI+F DE+DAI RG G V RV+S +L EMDG+ AATNR D +D ALLRPGRL + + + P + R + +VH +PLA +DL RL++ ++ G T AD+EA+CR+AA+MA+RE++
Sbjct: 276 KKLAEMTHGYTGADLAALCREA-AMNALRRYLPQIDLTKDRIPPEILEKMEVTMQDFLNAYKEVIPSGLREVYVEVP----------EVRWDDIGDLEEAKQQLRETVEWPLKHPEAFRRLGIKPPRGILLFGPPGCGKTLLAKAVATESGANFISVKGPEVLSKWVGESERAIRLIFRRARQAAPCIIFFDEIDAIAPVRGAGIGDSH--------VTERVVSQILTEMDGIEKLE---------------NVVVIAATNRPDIIDPALLRPGRLDKLIYVPPPDIKGRYEIFKVHTRKMPLAEDIDLWRLAE--LTDGYTGADIEAACREAALMALRENI 581
BLAST of mRNA_C-linearis_contig73.14946.1 vs. uniprot
Match: A0A4D9CZ55_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ55_9STRA) HSP 1 Score: 212 bits (539), Expect = 2.740e-53 Identity = 202/680 (29.71%), Postives = 278/680 (40.88%), Query Frame = 1
Query: 1099 RDVLPA-GIVVCGPSGVGKTLALDILTENLREVHGVHVIRLLGPQILSGVAQGGDGAGGGRGGRPGDNAASSLLQGPLGLSLAEARARAPSVIVLDELDALFDSCGGGDEGGRADDPLGEGV------RANAALLEMIDRASVMEGVTVLGATRRSPGGKGGAGWTELETGAGGGATLPAAFRKPGRFDRCVAVGPPSQAQRERILRVLLSSSEGAQGWELEPLEIAIAPAADSLADETTPRGGVESELKESRQPLVESRGGRRSETLHAEARGSREVGRRSSRESPEGAAEAARRRGQRNKAGEAADGTLAEWAKRLSSVTPGMVGGDLERLVRTAQARSAQR----------RRTSEPRVPPLLPNTLSWQDAMGAVAVTVPRSLRGLDVAFSGSSGDGVGGGAPTWASVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLHGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILFLDELDAITAKRGDGXXXXXXXXXXXXSVHARVLSTLLNEMDGVASTSAXXXXXXXXXXXXXXXXXXXAATNRRDALDAALLRPGRLHESVELGVPAREDREGVLRVHAGCLPL---------AAGVDLARLSQDDVSGGLTCADVEASCRDAAMMAVREDLHGAREASGCSF 3060
R + PA G ++ GPSG GKT L E G HV+R+ GP+++ + + L EARARAP+V+VLDE++AL P E R A LL ++D ++ V VL AT R L A R+PGR DR + VG P +A R ILRVLL+ + G+ESE+ AAD L +R++S G VG DL + + A + +R R +P ++ +D A+A+ P +LR + V W +GG K+ L+ V+WP PEAF RMG++ P G LL+GP GC K+L+A+ LATE NFL V+ ELLS++LGE+E L+ LF +ARAAAP ++F DE+DA+ +RGDG RVLS LL E+DGV AATNR D LD ALLRPGR+ V + P R +L++ +P AG+DL L++ + G + A+V A R+AA+ AV ED AR G F
Sbjct: 296 RGLRPARGFLLVGPSGTGKTTLLRAAAEYFGRGRGYHVMRVAGPEVVGRLV--------------------GETESRLRRVFREARARAPTVMVLDEVEALC--------------PRREAASPDLDRRMVATLLALLDGFQGLDRVVVLAATSRPQ-------------------ALDPALRRPGRLDRELEVGVPGEAARGEILRVLLAGT------------------------------GLESEV--------------------------------------------------------AADKVL----QRVASRAHGFVGADLLLVCKEAAMLAVRRGMEAAGGGAGRDGGDP-------VRMTGEDLAAALALVRPSALREVAVEVP----------RVQWGDIGGMDRVKQSLRECVEWPLTRPEAFVRMGIAPPKGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESEKALQGLFKKARAAAPTVVFFDEVDALAGRRGDGEDC---------KASERVLSQLLTELDGVQPLRRVVVV---------------AATNRPDLLDPALLRPGRIDRRVYVPPPDLASRREILKIALRGVPTESPEGEASEGAGLDLEELARR--TEGFSGAEVVALSREAALCAVEEDPVHARLLRGRHF 789 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig73.14946.1 >prot_C-linearis_contig73.14946.1 ID=prot_C-linearis_contig73.14946.1|Name=mRNA_C-linearis_contig73.14946.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1021bp MLLLAFPALEGSLCCLGSGDWPLDPHEILLHPQDLEKLRVPAFGYVAIHRback to top mRNA from alignment at C-linearis_contig73:265251..269760+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig73.14946.1 ID=mRNA_C-linearis_contig73.14946.1|Name=mRNA_C-linearis_contig73.14946.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4510bp|location=Sequence derived from alignment at C-linearis_contig73:265251..269760+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig73:265251..269760+ >mRNA_C-linearis_contig73.14946.1 ID=mRNA_C-linearis_contig73.14946.1|Name=mRNA_C-linearis_contig73.14946.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=6126bp|location=Sequence derived from alignment at C-linearis_contig73:265251..269760+ (Chordaria linearis ClinC8C monoicous)back to top |