mRNA_C-linearis_contig73.14937.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig73.14937.1
Unique NamemRNA_C-linearis_contig73.14937.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig73.14937.1 vs. uniprot
Match: A0A6H5JGP1_9PHAE (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP1_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 1.960e-107
Identity = 176/196 (89.80%), Postives = 177/196 (90.31%), Query Frame = 2 
Query:   89 MTGTMSAGLRTPGATAALGREARTYRRLSTAKSGAASTVMMPIGVPKVAYRVPGAPNADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKVCARVCNSRRILTQGKRMALPHSRVMIHQPMGGAQGQAEDIKVE 676
            MTGTMS GLRTPG T+ LGREARTYRRLST KSGAASTVMMPIGVPKVAYRVPGAP ADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAK              GKRMALPHSRVMIHQPMGGAQGQAEDIKVE
Sbjct:    1 MTGTMSPGLRTPGTTSVLGREARTYRRLSTTKSGAASTVMMPIGVPKVAYRVPGAPTADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAK--------------GKRMALPHSRVMIHQPMGGAQGQAEDIKVE 182
[Close]
BLAST of mRNA_C-linearis_contig73.14937.1 vs. uniprot
Match: D7FX14_ECTSI (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX14_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 1.510e-106
Identity = 175/181 (96.69%), Postives = 176/181 (97.24%), Query Frame = 2 
Query:    5 MVRAFCAVVGALLAVGQATAFFGSPSAFMTGTMSAGLRTPGATAALGREARTYRRLSTAKSGAASTVMMPIGVPKVAYRVPGAPNADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKV 547
            M R FCAVVGALL VGQATAFFGSPSAFMTGTMS GLRTPGAT+ALGREARTYRRLSTAKSGAASTVMMPIGVPKVAYRVPGAP ADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKV
Sbjct:    1 MARGFCAVVGALL-VGQATAFFGSPSAFMTGTMSPGLRTPGATSALGREARTYRRLSTAKSGAASTVMMPIGVPKVAYRVPGAPTADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKV 180
[Close]
BLAST of mRNA_C-linearis_contig73.14937.1 vs. uniprot
Match: A0A835Z885_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z885_9STRA)

HSP 1 Score: 292 bits (748), Expect = 1.180e-91
Identity = 153/202 (75.74%), Postives = 172/202 (85.15%), Query Frame = 2 
Query:   71 GSPSAFMTGTMSAGLRTPGATAALGREARTYRRLSTAKSGAASTVMMPIGVPKVAYRVPGAPNADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKVCARVCNSRRILTQGKRMALPHSRVMIHQPMGGAQGQAEDIKVE 676
            G+ S +++G+MSAGLR P   ++ G    +Y+R     SGAASTVMMPIGVPKVAYRVPGAP+ADWVDIYNRLYRERIIFLGQEIDDELANQIIGV+LYLDSEDSTKPIY+YVNCPGGSVIAGLA++DTMQHI+SEV+TIN+G+AASMASF+LAAGAK              GKRMALPHSRVMIHQPMGGAQGQAEDIKVE
Sbjct:   24 GAHSTWLSGSMSAGLRMPAVPSSTGLSKASYQR-----SGAASTVMMPIGVPKVAYRVPGAPSADWVDIYNRLYRERIIFLGQEIDDELANQIIGVMLYLDSEDSTKPIYMYVNCPGGSVIAGLAIYDTMQHIKSEVITINMGMAASMASFLLAAGAK--------------GKRMALPHSRVMIHQPMGGAQGQAEDIKVE 206
[Close]
BLAST of mRNA_C-linearis_contig73.14937.1 vs. uniprot
Match: A0A0G4F8U0_VITBC (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8U0_VITBC)

HSP 1 Score: 267 bits (682), Expect = 2.940e-81
Identity = 134/170 (78.82%), Postives = 146/170 (85.88%), Query Frame = 2 
Query:  167 RLSTAKSGAASTVMMPIGVPKVAYRVPGAPNADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKVCARVCNSRRILTQGKRMALPHSRVMIHQPMGGAQGQAEDIKVE 676
            R   A SG  S  MMPIGVPKVAYR+PG+PNADW+DIYNRLYRERIIFLGQEIDDE ANQIIGV+LYLDSEDSTKPIY+Y+NCPGGSVIAGLA++DTMQHI+SEVVTINVGL+ASMASF+LAAG              T+GKR ALPHSRVMIHQPMGGAQGQAEDIKVE
Sbjct:   78 RSPAASSGVGSLKMMPIGVPKVAYRIPGSPNADWIDIYNRLYRERIIFLGQEIDDEFANQIIGVMLYLDSEDSTKPIYIYMNCPGGSVIAGLAIYDTMQHIKSEVVTINVGLSASMASFLLAAG--------------TKGKRFALPHSRVMIHQPMGGAQGQAEDIKVE 233
[Close]
BLAST of mRNA_C-linearis_contig73.14937.1 vs. uniprot
Match: A0A7S1TU42_9STRA (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU42_9STRA)

HSP 1 Score: 265 bits (677), Expect = 3.750e-81
Identity = 140/201 (69.65%), Postives = 158/201 (78.61%), Query Frame = 2 
Query:   74 SPSAFMTGTMSAGLRTPGATAALGREARTYRRLSTAKSGAASTVMMPIGVPKVAYRVPGAPNADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKVCARVCNSRRILTQGKRMALPHSRVMIHQPMGGAQGQAEDIKVE 676
            S S F TGT++AGL  P A    G             SGA S VMMPIGVPKVAYRVPG+ +ADW+DIYNRLYRERIIF+GQEIDDE ANQIIGVLLYLDSED  KPIY+Y+NCPGGSVIAG+A++DTMQHI+++VVTINVG++ASMASF+LAAGAK              GKR+ALPHSRVMIHQPMGGAQGQAEDIKVE
Sbjct:   20 SASRFTTGTLNAGLYAPSAAGVRGT------------SGAGSMVMMPIGVPKVAYRVPGSGSADWIDIYNRLYRERIIFVGQEIDDEFANQIIGVLLYLDSEDPDKPIYMYLNCPGGSVIAGMAIYDTMQHIKADVVTINVGISASMASFLLAAGAK--------------GKRLALPHSRVMIHQPMGGAQGQAEDIKVE 194
[Close]
BLAST of mRNA_C-linearis_contig73.14937.1 vs. uniprot
Match: A0A7S2S0Z5_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0Z5_9STRA)

HSP 1 Score: 259 bits (663), Expect = 6.230e-79
Identity = 130/166 (78.31%), Postives = 143/166 (86.14%), Query Frame = 2 
Query:  179 AKSGAASTVMMPIGVPKVAYRVPGAPNADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKVCARVCNSRRILTQGKRMALPHSRVMIHQPMGGAQGQAEDIKVE 676
            A+ GA   VMMPIGVPKVAYR+PG+P+ADWVDIYNRLYRERIIFLGQEIDDE+ANQIIGV+LYLDSEDS KPIYLY+NCPGGSVIAG+ALFDTM HI+S VVTIN+GL+ASMASF+LAAG +              G RMALPHSRVMIHQPMGGAQGQAEDIKVE
Sbjct:   60 ARQGAGGLVMMPIGVPKVAYRIPGSPSADWVDIYNRLYRERIIFLGQEIDDEIANQIIGVMLYLDSEDSKKPIYLYINCPGGSVIAGMALFDTMNHIKSPVVTINLGLSASMASFLLAAGKR--------------GSRMALPHSRVMIHQPMGGAQGQAEDIKVE 211
[Close]
BLAST of mRNA_C-linearis_contig73.14937.1 vs. uniprot
Match: A0A7S2CF89_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CF89_9STRA)

HSP 1 Score: 259 bits (662), Expect = 7.950e-79
Identity = 133/171 (77.78%), Postives = 148/171 (86.55%), Query Frame = 2 
Query:  167 RLSTAKS-GAASTVMMPIGVPKVAYRVPGAPNADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKVCARVCNSRRILTQGKRMALPHSRVMIHQPMGGAQGQAEDIKVE 676
            ++STA + GA   VMMPIGVPKVAYRVPG+P+ADWVDIYNRLYRERIIFLGQEIDDE+ANQIIGV+LYLDSEDS+KPIYLY+NCPGGSVIAG+ALFDTM HI+S+VVTIN+GLAASMASF+LA G K              G RMALP+SRVMIHQPMGGAQGQAEDIKVE
Sbjct:   51 KVSTANTAGAGGLVMMPIGVPKVAYRVPGSPSADWVDIYNRLYRERIIFLGQEIDDEIANQIIGVMLYLDSEDSSKPIYLYINCPGGSVIAGMALFDTMNHIKSKVVTINLGLAASMASFLLAGGEK--------------GSRMALPNSRVMIHQPMGGAQGQAEDIKVE 207
[Close]
BLAST of mRNA_C-linearis_contig73.14937.1 vs. uniprot
Match: F0YKH8_AURAN (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YKH8_AURAN)

HSP 1 Score: 253 bits (645), Expect = 2.870e-77
Identity = 125/156 (80.13%), Postives = 138/156 (88.46%), Query Frame = 2 
Query:  209 MPIGVPKVAYRVPGAPNADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKVCARVCNSRRILTQGKRMALPHSRVMIHQPMGGAQGQAEDIKVE 676
            MPIGVPKVAYRVPGAP+ADW+DIYNRLYRERIIFLGQEIDDELANQIIGV+LYLDSEDSTKPIYLY+NCPGGSVIAGLA+FDTM HI+S+VVTIN+GL+ASMASF+L  G              T+G R+ALP+SRVMIHQPMGGAQGQAEDIKVE
Sbjct:    1 MPIGVPKVAYRVPGAPSADWIDIYNRLYRERIIFLGQEIDDELANQIIGVMLYLDSEDSTKPIYLYINCPGGSVIAGLAIFDTMNHIKSKVVTINIGLSASMASFLLCGG--------------TKGSRLALPNSRVMIHQPMGGAQGQAEDIKVE 142
[Close]
BLAST of mRNA_C-linearis_contig73.14937.1 vs. uniprot
Match: J7G5H7_9CRYP (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7G5H7_9CRYP)

HSP 1 Score: 254 bits (648), Expect = 3.540e-77
Identity = 128/165 (77.58%), Postives = 143/165 (86.67%), Query Frame = 2 
Query:  182 KSGAASTVMMPIGVPKVAYRVPGAPNADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKVCARVCNSRRILTQGKRMALPHSRVMIHQPMGGAQGQAEDIKVE 676
            K  +A+  MMPIGVPKVAYRVPGAP+ADWVDIYNRLYRERIIFLGQEIDDE+ANQII V+LYLDSED++KPIYLY+N PGGSVI+GLA++DTM+HI+SEVVTINVGLAASMASFILAAG K              GKR+ALPHSR+MIHQPMGGAQGQA DIKVE
Sbjct:   30 KKNSATIKMMPIGVPKVAYRVPGAPSADWVDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSEDNSKPIYLYINSPGGSVISGLAMYDTMRHIKSEVVTINVGLAASMASFILAAGEK--------------GKRLALPHSRIMIHQPMGGAQGQASDIKVE 180
[Close]
BLAST of mRNA_C-linearis_contig73.14937.1 vs. uniprot
Match: A0A7S1GRK0_CYCTE (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GRK0_CYCTE)

HSP 1 Score: 252 bits (644), Expect = 3.470e-76
Identity = 132/188 (70.21%), Postives = 152/188 (80.85%), Query Frame = 2 
Query:  131 TAALGREARTYRRLSTAKSGAASTV------MMPIGVPKVAYRVPGAPNADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAKVCARVCNSRRILTQGKRMALPHSRVMIHQPMGGAQGQAEDIKVE 676
            T +L  ++++ R L    SG +++       MMPIGVPKVAYRVPG  +ADWVDIYNRLYRERIIFLG EIDDELANQIIGV+LYLDSEDSTKPIYLY+NCPGGSVI+GLA++D MQHI SEV+TIN+GLAASMASFILAAG++              GKR+ALP+SRVMIHQPMGGAQGQAEDIKVE
Sbjct:   30 TFSLATQSKSIRALGNVYSGGSASSRRNDIKMMPIGVPKVAYRVPGTQSADWVDIYNRLYRERIIFLGSEIDDELANQIIGVMLYLDSEDSTKPIYLYINCPGGSVISGLAIYDAMQHISSEVITINLGLAASMASFILAAGSR--------------GKRLALPNSRVMIHQPMGGAQGQAEDIKVE 203
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGP1_9PHAE1.960e-10789.80ATP-dependent Clp protease proteolytic subunit n=1... [more]
D7FX14_ECTSI1.510e-10696.69ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A835Z885_9STRA1.180e-9175.74ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A0G4F8U0_VITBC2.940e-8178.82ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S1TU42_9STRA3.750e-8169.65ATP-dependent Clp protease proteolytic subunit n=2... [more]
A0A7S2S0Z5_9STRA6.230e-7978.31ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S2CF89_9STRA7.950e-7977.78ATP-dependent Clp protease proteolytic subunit n=1... [more]
F0YKH8_AURAN2.870e-7780.13ATP-dependent Clp protease proteolytic subunit n=2... [more]
J7G5H7_9CRYP3.540e-7777.58ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S1GRK0_CYCTE3.470e-7670.21ATP-dependent Clp protease proteolytic subunit n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:134626..141081 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score253.1
Seed ortholog evalue1.5e-64
Seed eggNOG ortholog44056.XP_009040903.1
Preferred nameclpP
KEGG koko:K01358
KEGG Pathwayko04112,ko04212,map04112,map04212
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009368,GO:0009536,GO:0009987,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0031974,GO:0032991,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0051603,GO:0070011,GO:0070013,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.serine-type endopeptidase activity
EggNOG OGsCOG0740@1,KOG0840@2759
Ec32 ortholog descriptionATP-dependent Clp protease, proteolytic subunit
Ec32 orthologEc-10_003920.1
EC3.4.21.92
COG Functional cat.OU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons5
Model size1830
Cds size813
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930398.8377283-UTR-C-linearis_contig73:134625..1351961622930398.8377283-UTR-C-linearis_contig73:134625..135196Chordaria linearis ClinC8C monoicousUTRC-linearis_contig73 134626..135196 -
1690881049.5522258-UTR-C-linearis_contig73:134625..1351961690881049.5522258-UTR-C-linearis_contig73:134625..135196Chordaria linearis ClinC8C monoicousUTRC-linearis_contig73 134626..135196 -
1622930398.8647137-UTR-C-linearis_contig73:135710..1361521622930398.8647137-UTR-C-linearis_contig73:135710..136152Chordaria linearis ClinC8C monoicousUTRC-linearis_contig73 135711..136152 -
1690881049.5711555-UTR-C-linearis_contig73:135710..1361521690881049.5711555-UTR-C-linearis_contig73:135710..136152Chordaria linearis ClinC8C monoicousUTRC-linearis_contig73 135711..136152 -
1622930398.9633267-UTR-C-linearis_contig73:141077..1410811622930398.9633267-UTR-C-linearis_contig73:141077..141081Chordaria linearis ClinC8C monoicousUTRC-linearis_contig73 141078..141081 -
1690881049.6264892-UTR-C-linearis_contig73:141077..1410811690881049.6264892-UTR-C-linearis_contig73:141077..141081Chordaria linearis ClinC8C monoicousUTRC-linearis_contig73 141078..141081 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930398.8848305-CDS-C-linearis_contig73:136152..1363881622930398.8848305-CDS-C-linearis_contig73:136152..136388Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 136153..136388 -
1690881049.581848-CDS-C-linearis_contig73:136152..1363881690881049.581848-CDS-C-linearis_contig73:136152..136388Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 136153..136388 -
1622930398.9057891-CDS-C-linearis_contig73:136757..1369741622930398.9057891-CDS-C-linearis_contig73:136757..136974Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 136758..136974 -
1690881049.5930464-CDS-C-linearis_contig73:136757..1369741690881049.5930464-CDS-C-linearis_contig73:136757..136974Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 136758..136974 -
1622930398.923292-CDS-C-linearis_contig73:137648..1377831622930398.923292-CDS-C-linearis_contig73:137648..137783Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 137649..137783 -
1690881049.6071262-CDS-C-linearis_contig73:137648..1377831690881049.6071262-CDS-C-linearis_contig73:137648..137783Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 137649..137783 -
1622930398.9439201-CDS-C-linearis_contig73:140852..1410771622930398.9439201-CDS-C-linearis_contig73:140852..141077Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 140853..141077 -
1690881049.6168694-CDS-C-linearis_contig73:140852..1410771690881049.6168694-CDS-C-linearis_contig73:140852..141077Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 140853..141077 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14937.1prot_C-linearis_contig73.14937.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig73 136153..141077 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig73.14937.1

>prot_C-linearis_contig73.14937.1 ID=prot_C-linearis_contig73.14937.1|Name=mRNA_C-linearis_contig73.14937.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=271bp
MVRAFCAVVGALLAVGQATAFFGSPSAFMTGTMSAGLRTPGATAALGREA
RTYRRLSTAKSGAASTVMMPIGVPKVAYRVPGAPNADWVDIYNRLYRERI
IFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSVIAGLALFD
TMQHIRSEVVTINVGLAASMASFILAAGAKVCARVCNSRRILTQGKRMAL
PHSRVMIHQPMGGAQGQAEDIKVEKGARARTHAMIPGVVFSDVAAPKPLG
DFAGLSGPSVCDAAAGYELF*
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mRNA from alignment at C-linearis_contig73:134626..141081-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig73.14937.1 ID=mRNA_C-linearis_contig73.14937.1|Name=mRNA_C-linearis_contig73.14937.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6456bp|location=Sequence derived from alignment at C-linearis_contig73:134626..141081- (Chordaria linearis ClinC8C monoicous)
CACCATGGTGCGTGCATTCTGCGCCGTGGTCGGGGCGCTCCTAGCCGTGG
GCCAGGCGACCGCCTTTTTCGGCTCGCCGTCGGCCTTCATGACGGGGACC
ATGTCGGCCGGCCTGCGGACACCGGGGGCGACGGCGGCGCTTGGGCGGGA
GGCGAGGACGTACCGCCGATTGTCGACGGCGAAGTCGGGGGCGGCGTCGA
CCGTGATGATGCCTATCGGGGTGCCTAAGGTGCGTGTAGTTGTGTTGAAA
AAGTAGATTCTACCGCGGTTGTGTACTGGGTGGTACATACATACATACCA
GCAGCAGCAGTCCTTCGTCTTGGAAATGGAGGCGAATGGCAGGGCGAACT
TGCATGCTGTGCCGGATGCAGGGGCAAAGGGGGGCATGGATTTAAGGTTG
ACCGTGATCACAGCAGTACGGTGGAACCTCCAGAAACAGACACAAACTTT
CGCCGTGCCTCGCCACGGCCTTGCTGTAGACGAGCAGTGCGCCTAAGAAG
ATCTATCGCCGAGTGTCGACAGGTTCGCTGTGACGGTGGTGCTGTGCCCG
AGACACATGTAGAGTTGTACACATGCGCAAATGACGCGAAGTTGTAACAC
TTGTTTATCACACCCACACCCGTCCACATGTGCATACGACAGTTTGTTAC
TTCCGACGCAACTCTCAGCAAACCCGTCTTTTTATTCATTCATTTTTATT
TGTCTTGACATATCTCCAGAGTTGTTCGCGAATAAAAGCCCGCGGGATCT
CGTGAAGAGCAACGTCGTTACGCAGAGCCTCTCTGCTCGATCCCGCGCGA
CACGTGTCTATTGCCCCGCAGCTGCGGTCCGTTGCTGCAAAATAGGCGTG
GGTGGGAACATCCTAACTATTCCAACACTCCTTCCAGCAGACTGGGGCGT
CGTCACGGAGAGGGGCGTGGAAGTCTCGCGTGCGTGCTCTCTATCACACC
CGTGCCGCATGTACCGGTTTGGCGGCGATAGAGCAATTTTGTGCTGTTTA
TTTTTCATGTGTTTGTTTTGCAGAAGCTGCTCCAACTTTGAGTTTTTGCC
TATTTTCATGTTCACGTCCTCTTGCAGTCAAAAATACATTGAAGAACAGC
GTACCCGGCGTACTGGTATTTACGACGGTAAGGTTCAGACCACCGAGGAT
GGAACACACCCAAGCTGTAGCTTTTTCTGCACGATTAGGGGTACGGGATT
GCTTATCGAATACATCCCGTGTGCCCCGCCTGTGCCGTTGGCGCGTTCCT
CAGCTCTGCCTGAAAATTCGCAGAATATTCTGTACCTGTTGCCCAGCTTA
GAAACCTCCCATCACGTGGGGTGGGATGGTATTTGCGCCCACTTCTGATG
GTATTACGATGCGATAGGATGGTATCGTACTTGTCGTGATGGGATGGGAT
GGTGTTTGCGCGCACGTCTGATGGTAATACGATGGGATGGGATGGTATCG
TACTTGTCGTGATGGGATGGGATGGTAACTGGTGGGACGGTGAGCGTGAT
GGGATGGGGGAGCTTTTGCCTTGGCGTGGTGGCGAGAAGATGGCAACACA
AAAGAACTCTGATACACAGAGGTGTTACCAGTGCTACCCATCCTCCCGCT
TGCATACACATACAAATAAACATCAGGAAATAAAACAAATATCCATATAA
AAGTTGTCGCCCTGGAAATGAAAAATACGAAAATACTACAACCGCGTAGT
AGCACGAGACTAATACACTTCCGTCTGCCCACCTTGTCAAAAACAGCAAT
AACAGGGTATTCCTTAAAATAACGTTCTTTAGACCACAGCCAACTGCAGG
CACTAATTCCAGCCGAAGTTCTAAAATGTACTGCTATTACTGCTGTGTTG
TTGAAGTTCTGGCCACAAACGCTTGAAACATACCAACATAAAACAAAAGT
AAAAAACCAGCTGCAAAAAACAAAAACAAGAAAACAAAAACAAAACAAAA
AACTGGTATTTGAAACGTCGGACAGCAACCCTACTTGTTCAGGGTAACAG
TGTTACCTTTCCTGGCTTGCTGGGCGGCAAACCGCCACTTTTGCGATTGC
ATCGTGCTTTGCCTTCAATGCGGCTAGCTCTTGCTCTATTTTGGCAAAGC
CAGGGATGAGGCGCCTGTGAAGCCTGAGCAACAGCATCTGCTCGATCTTA
CCGGGCAGGGTACCGGCACGCAAGTCACTAATATAAGGGCCTGCTTGAGG
CCGGAAAAAATCCTCTCCGCTTGACAACTGATGGTATCTACGCCTGCGTA
CAAACGTGCTAGCAAACCAACCCACATGCGGACATGCGGCCAGCGAGCAG
GCACTACAACGTTCCCTGCCACGTGCTGCGTGTGTGTGTGTGTGTAGCGG
GTCGAACCCCCTACCCCCCCTATTCCACACATTTTCTGCCCTTACACACC
CCTCCCTCAGAAAATACGTTGTACTGGATGGGCGGGGGGGGAGGTGCCGA
GACGTACGGGGCGGTATTCGTGGTAGATCTCTGAAAAGAGAAATGGGTGA
GAGAAGACTGTAATCGATGAGATGGTGGTAACTTCAATAGTTGTGATGGT
AAATTAGATGGGATGGGAAGCGTTCAAGAATCATCACCTCTTATACTGAT
GGTGTCTCCGACTGGCGTGGTGGTGATGGAATGGTATCTTGTGATGGTAC
CAAAATTCCGACCCGATTACCATCCCATCACAACACCACGTATCACCCTG
TTAGAAACAGAACACTGGTACGCAGCGGACCATAAATAGCATGTAAGTTT
ACCCGGTATTGATTGGTAAATGCAGGGGTATCCGTAGGACGAAACACAAC
CATGCCACATACTCACGCACGCTCGGGACACAACACCGAGAGCAGTGGCG
AGGCGTCAAAGGGTAGATACTATTAATGGGGCACCAAGCACAGCGGCTTG
TCCGGCAGCGAAGACCTCCCTGCGGAAAAACCGAGGGAAAACAGTCGATA
TTTTCGCGTTCAACCCGACCGCCTCGGCGTTTTCAGCAAGCGAAGCTACC
TGAGTGCAGCGGTGCAACTGCAAAATAAACCAAACCTGCCCATCCACGCT
CGGTAGGTATCCGAGCCTTATCATACGAGCCACTCTCTCGTTGTCTCCCT
GGTGCGGATTCCTTGTCGCTCATACGCTGCTGTACTCCCGACGACCCCGA
ACATTTCTCTTCTCCAAAAGGGTGTAATCGTTTCCCGCCATCCCCGGCTC
GAAGAACTTATTCTGTGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGCGTGCGCGCGCGCGTAAATGTGTTGGAAGGT
GGCGTACCGAGTACCGGGAGCGCCTAACGCGGACTGGGTGGACATCTACA
ACCGCCTCTACCGCGAGCGCATCATTTTCTTGGGGCAGGAGATCGACGAC
GAGCTGGCCAACCAGATCATCGGAGTGCTGCTGGTGCGTGCTGGCCTGTA
TGCAGTTGCCATCGGGGGGACGTGGTGGGAGGGGTCGTATTTTGTTCGTC
TTGAGTTTCGGTGGCGCTGCGTGAGCATGTGACATGCATGGTTCCCCCCG
TGTTAAATACAGCAGTACGTCGGGGTGCGCCTAACCCTCTGTTTCCCTCC
CTCTCAAGGCTGGAGTAACTTGTCCGAAGGGAAAGAGAGCCAGGCATTCT
GGCGTTGCTCCTGCCGCTTGTTAGGCTTCCGCCGCTCTGCTGGGGGGCGA
GTGTCGCCCACGTGTTGACCTTTGGGTCGTTTTGTGGTTTCACAGCCCTC
TCTGCACCTTTTGTTCCGCCGACGGCCGAACCCCGCTCTAGTTGTTCGTC
TTTCTGCGTTGCTCCTGTCCCCGCCTGCCACACCCGTCCCCGTTAAGTTG
TTTTCATGCCTCACGAAACCTCTCGCGCTCTCTCCCGAGCCATAGATCAC
CGCCTCCGGACTGCGAAGACACGTTTACAAAATCAAACGGAGCCCTCTTT
GTTTTGCTACAGCCGCTTCTCAAGATTTGTCAGACAAAACTCGGCTTCTT
TCTTCTCGCCGCCCCCCTTTTCCTCCAAACCCGCGTCTTGGTGTCAAAAT
ATTTCCGTACATGCGTGGTGTGCGCCCATGTGCCGCCCTGCTTTGCTGCG
CACCCAGTACCTTGACTCCGAGGACAGCACCAAGCCTATCTACCTGTACG
TGAACTGCCCGGGAGGCTCCGTGATTGCCGGGCTGGCCCTGTTCGACACC
ATGCAGCACATCCGCTCGGAGGTGGTGACGATCAACGTCGGGCTCGCCGC
TTCGATGGCCTCGTTCATCCTTGCCGCGGGAGCGAAGGTGTGCGCACGAG
TATGCAATAGCAGGAGGATTCTCAGCGAGAGGGAATAAACTAGCGGGGAG
ACCAACCGCTAAGTGTTCGTGGGGGGGGGGCGGGGTGTGTGTGACAGGTC
CTCCGCCGAGCGGGCGGCAAAGGGTAACGCAAGTCTACAAAAGGACAACG
CACTATTTCGTTTGGATCCGACTCCTGTTTTCTAAGTCATCCAGGACAGT
TTTTTTTCATTTCCCTTGACATGGAGAGCCAATGTTCTCGACGTATTTAC
CGTTCTTCCCGCCGTCAATCTCCACACTTGCTTGCGCCCGGGTCGGCTAC
ACCGGCCGTGCTCTTGTCCCTTTGTGCCATTCATCGTTTGACACCCGCCG
CCGTGCGCGTTGGGTCGTACTGCTGTGCACACAAAATCATAAGCACAGGG
GAAGCGCATGGCGCTGCCGCATTCTCGCGTGATGATTCACCAGCCTATGG
GCGGAGCGCAGGGCCAAGCGGAGGACATCAAGGTGGAGAAAGGGGCGCGC
GCGCGCACGCACGCCATGATTCCGGGGGTTGTTTTTTCTGATGTCGCTGC
TCCTAAACCTCTCGGAGATTTCGCCGGGTTGTCTGGGCCTTCCGTCTGCG
ACGCCGCAGCCGGTTACGAACTCTTTTAATTTTTCGTTGGTGGTCTGCAA
ATCGAGGAAAGGAAAGGCGGCGTTCTGCTTGGTGCGGGTATAGGTGTAGG
TGTTGTTGGCGCGCTGGGTTGACAGGACGGACCGGGCGAACGGCTGGGCG
AGTAGGAGCGTGGTAACTTCTGGTGTCCCTCACGCGCAGAAAATCTTCAC
GCTGCGTGTCGGGGGTTGCTCGCTGCTCCCTCTTGTGTTGGTCCTGGCAC
CCTTTCTGGCTCTCCGCCCTCCTGCTGCTGATGCGCTCATCCTGTTTCTT
TTGCTTTGCCCCTCGCTGTTGCGCGCTTGCTGGGCGCGCGCGACTGCTGC
GATGACGACGACAACGACACCAACGGAGCAGGTGGAGGCGACCCAGATCA
TGCGAATCCGCGACAACATCGTGCGCATGTACTCCATGATGACCGGGCAA
ACCCAGGAGCAGATCACCATTGTGAGCAAAAGACCCCTGGGTTGGTTAGT
TTCAAGTTTATTTTCCAAGCGTGTCGATTCGATGTCGCTCGCAGAAAGTT
CCTACTTTGGAAGTGTATGTCTAGTTTTTAGGGCTGCACTCGCAAGGGCG
AATGAAGCCCGGCGCGTAGGTTAGCACATGCTTAACCACGAGGTTGCACA
AATTGGTAGAGGTTGTGCGTTGATGCTGTCTGAGTTCGTGTCTTACAGGG
CGCGCTACATGAGTAGCTTGGTTCATGGCGAGTTGACACGCACCTTGGTG
GTGGCCATGCGGTTCGTGTTTCATCGTGAAAAGGCGTACGTGTGGGTCGG
GCCTCCCAGCCAACACGTTCGTAGGGCCAAGCAGTTACACCGCAGAGCCA
GTGCAAGTTTGGCCGAGCTGTTTTCTACGATTTGTTTGGCTAGGCATGTA
CCACCCCGTCGTGTTGTTCTTACGCTCGCACCCTTTTTTTCGTCTTTTTT
TTTTTTCACCTCCTTTTCGGCGCCGATCAAATTAGGACCTGGACCGCGAT
AACTTCATGTCGGCGCAGGCGGCCGCGGATTACGGCCTCGTGGACACCGT
AATAAAACTGTCAAAGAAGTAGTTATCCGTGGCGTGAAGATAAGATGTTC
GAAGGGCGCTTTCCTGAGCGCACACGATGGATTTTGTAGGTTGGGTACGC
AGTCGCGGGAGGAGTTAGCGAGGGAGCCGTCGCTGCTCTCGCTGTTTCCA
CAGAGGGTTTGTCCCAGAGGTACGCTTTCATCATTGGTTGTTACGCGTGC
AATACGATAGTCGGCGATGACACTCGAAGGAAACCCAGCAGTGGTTGAAG
ACACGAGTCGGGGCTCATAAAATTGTTTGCCACGTTCCTGCCTCTGGTAT
GCGCGGACGCGAGCGCATTCAGCGACGGCCGCCACCAAGCTCCTCGCCGA
CATACTCGAGTGGAGCACGCTCTCTTACGCGGCAATCCTCGCGTCGACTA
CAATCTTCAAGGCGTTATGCCTTCCATTTTATTGCGAGTAACCGGCACTT
GGCTCCACACCGGAGCTGTGCAGGTTCCTCCTGCAACGTATAAACTGAAA
GCGTTC
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Coding sequence (CDS) from alignment at C-linearis_contig73:134626..141081-

>mRNA_C-linearis_contig73.14937.1 ID=mRNA_C-linearis_contig73.14937.1|Name=mRNA_C-linearis_contig73.14937.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1626bp|location=Sequence derived from alignment at C-linearis_contig73:134626..141081- (Chordaria linearis ClinC8C monoicous)
ATGGTGCGTGCATTCTGCGCCGTGGTCGGGGCGCTCCTAGCCGTGGGCCA
GGCGACCGCCTTTTTCGGCTCGCCGTCGGCCTTCATGACGGGGACCATGT
CGGCCGGCCTGCGGACACCGGGGGCGACGGCGGCGCTTGGGCGGGAGGCG
AGGACGTACCGCCGATTGTCGACGGCGAAGTCGGGGGCGGCGTCGACCGT
GATGATGCCTATCGGGGTGCCTAAGATGGTGCGTGCATTCTGCGCCGTGG
TCGGGGCGCTCCTAGCCGTGGGCCAGGCGACCGCCTTTTTCGGCTCGCCG
TCGGCCTTCATGACGGGGACCATGTCGGCCGGCCTGCGGACACCGGGGGC
GACGGCGGCGCTTGGGCGGGAGGCGAGGACGTACCGCCGATTGTCGACGG
CGAAGTCGGGGGCGGCGTCGACCGTGATGATGCCTATCGGGGTGCCTAAG
GTGGCGTACCGAGTACCGGGAGCGCCTAACGCGGACTGGGTGGACATCTA
CAACCGCCTCTACCGCGAGCGCATCATTTTCTTGGGGCAGGAGATCGACG
ACGAGCTGGCCAACCAGATCATCGGAGTGCTGCTGGTGGCGTACCGAGTA
CCGGGAGCGCCTAACGCGGACTGGGTGGACATCTACAACCGCCTCTACCG
CGAGCGCATCATTTTCTTGGGGCAGGAGATCGACGACGAGCTGGCCAACC
AGATCATCGGAGTGCTGCTGTACCTTGACTCCGAGGACAGCACCAAGCCT
ATCTACCTGTACGTGAACTGCCCGGGAGGCTCCGTGATTGCCGGGCTGGC
CCTGTTCGACACCATGCAGCACATCCGCTCGGAGGTGGTGACGATCAACG
TCGGGCTCGCCGCTTCGATGGCCTCGTTCATCCTTGCCGCGGGAGCGAAG
GTGTGCGCACGAGTATGCAATAGCAGGAGGATTCTCATACCTTGACTCCG
AGGACAGCACCAAGCCTATCTACCTGTACGTGAACTGCCCGGGAGGCTCC
GTGATTGCCGGGCTGGCCCTGTTCGACACCATGCAGCACATCCGCTCGGA
GGTGGTGACGATCAACGTCGGGCTCGCCGCTTCGATGGCCTCGTTCATCC
TTGCCGCGGGAGCGAAGGTGTGCGCACGAGTATGCAATAGCAGGAGGATT
CTCACACAGGGGAAGCGCATGGCGCTGCCGCATTCTCGCGTGATGATTCA
CCAGCCTATGGGCGGAGCGCAGGGCCAAGCGGAGGACATCAAGGTGGAGA
AAGGGGCGCGCGCGCGCACGCACGCCATGATTCCGGGGGTTGTTTTTTCT
GATGTCGCTGCTCCTAAACCTCTCGGAGATTTCGCCGGGTTGTCTGGGCC
TTCCGTCTGCGACGCCGCAGCCGGTTACGAACTCTTTTAACACAGGGGAA
GCGCATGGCGCTGCCGCATTCTCGCGTGATGATTCACCAGCCTATGGGCG
GAGCGCAGGGCCAAGCGGAGGACATCAAGGTGGAGAAAGGGGCGCGCGCG
CGCACGCACGCCATGATTCCGGGGGTTGTTTTTTCTGATGTCGCTGCTCC
TAAACCTCTCGGAGATTTCGCCGGGTTGTCTGGGCCTTCCGTCTGCGACG
CCGCAGCCGGTTACGAACTCTTTTAA
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