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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 311 |
| Cds size | 309 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930276.3503265-CDS-C-linearis_contig7:3661256..3661475 | 1622930276.3503265-CDS-C-linearis_contig7:3661256..3661475 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig7 3661257..3661475 + |
| 1690880988.5027924-CDS-C-linearis_contig7:3661256..3661475 | 1690880988.5027924-CDS-C-linearis_contig7:3661256..3661475 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig7 3661257..3661475 + |
| 1622930276.366299-CDS-C-linearis_contig7:3666105..3666195 | 1622930276.366299-CDS-C-linearis_contig7:3666105..3666195 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig7 3666106..3666195 + |
| 1690880988.5138702-CDS-C-linearis_contig7:3666105..3666195 | 1690880988.5138702-CDS-C-linearis_contig7:3666105..3666195 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig7 3666106..3666195 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig7.14600.1 >prot_C-linearis_contig7.14600.1 ID=prot_C-linearis_contig7.14600.1|Name=mRNA_C-linearis_contig7.14600.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=103bp
RSITCDCLARAGGRPLLDPRGFSRVASHPDAGLQESPRSPQATQRQRRRS
GRLFGYSLNVEGLQYQRLWNQREVPFFFAGDGAGRLQGPSSSKVLAALKA
SKG back to topmRNA from alignment at C-linearis_contig7:3661257..3666195+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig7.14600.1 ID=mRNA_C-linearis_contig7.14600.1|Name=mRNA_C-linearis_contig7.14600.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4939bp|location=Sequence derived from alignment at C-linearis_contig7:3661257..3666195+ (Chordaria linearis ClinC8C monoicous)
CGGAGCATTACTTGTGATTGTCTTGCTCGCGCCGGTGGCCGACCCCTTCT
TGATCCCCGGGGATTTTCACGCGTCGCATCACACCCGGATGCTGGTCTAC
AGGAGTCGCCACGCTCACCACAGGCGACACAGCGGCAGCGGCGACGCAGC
GGGCGGCTATTTGGCTATTCGTTGAACGTTGAAGGGCTACAATATCAGCG
CCTGTGGAACCAACGCGAGGTGTGTACCCTCCCTTCCCTCTAGACCGCAC
GGTGTTGGGTCTTTCTGCGTGGGCGTGGCCCAACGTTCGCCGAAAAATTA
TTCGTTGGTGGTTTGCGGGCCCGAGCGAGCGGAGATAGACGATGAAAAAT
AAAACACAAACACACACACACACAGCCCGGCAGCGAAACAACTTGTTCCG
AGGTTTTTTGTGTGTTTTGTGTGTCTTTCCGCGGCAGCGTCTTTTTGTTC
ACCGGAGAGGGAGAAAAAAGAAAAAAGAGAGGGCTCGCGGGGGATAGCCC
TTCGTTTTTGTCATGAAGAAAGGAGTGTGTGTGCTTCCACGCTGATTTTC
CGGGCGCGGAAACGGCCTCCGCCAACAGGACAAGTCCGTTGTCAGAGACC
GCCCCAGAGGCAAGCCTCTGCCCCGTGTGGCTCCTGGCCTAGCAAACGTG
GTGCCGCCGGGGATCGATCGAGTTTTTTGTTGTTGTTTTCTTGGGGGACA
GAAAATCAGGGCGGTGGTGGTGGACAAGCACCGTTTCCGAGAGGTCTCCA
TCACGCCCCCCCCCCCGCCGTTCGTAGATGGCAAACCGAGCCTTGACTGC
TGTGTGCGCTCTTTACTTACCGCGCTTCGTGAGCTCCGATATAATTGCTG
TCTACCACCACGCTGTTTCATTTTGTTCAACACCGCCAACAACTATATTA
TCCGGCTGGTGTGTCAAGGTGTGTGTGTGTATGTGTTTTTGTGTGTCTCC
GTGACCCAAATTTCCCCCCTGTCTCTCTCCGTCTCTTTGTCCCGTTCCCT
CTCCAAGAAGGGTACATACAGCAGTCGCTTTTTCATGCTTCAGAGATTTG
TGCCGGGTGGTTTCAGTCCACCATACACATACTGTATGCACCCACAGGCA
GACGGCAGCACTGGGTGTGCGTGACCAGCGTCATGATGCCGATGCCGATG
CCGTTGCCCTCCCTTCCACCTCCGATGTTTGCGAAGACCTCAAAGAGAGA
AATTGATTGCGTTTGGGCGGTCGCCTTTTCGGAGATTTCGTTATTTTTTT
TGCGGGGGGCGGGGGGCAGAGCGGCCCTGTCGAGGGTTTCGCTTTTTTCG
CAGCAGGCCCTTGTCCCGCAGACACTCACTCATGGTTCGCCGAACGTCAT
GCCCACGTGTCGCACCATTGAGTTTGATTTTTTTCAGCCATTTGAATTTC
CTCCTAATTTCGAGCATCCACGTATTTTTAATGTCGAGACAACCAACAAC
ATATCGCAGGAGGTAGGTGGAGACATCCCCCTCCTGTGTGACCCCGGATG
GTAGCCTAGCTAGTTGTAGTGAAGAGAAGGAGGCAGGCTACGAAAAAACA
GTTGTTTTGTTGTTGTTTGTTGTTGTTGTTTGTTGTTGTATTGTACCCCC
CTTTGTCCGTACTGATCGAACAGACATGGCCGATTTCCGTGGTCACAGGT
TAACTTACCCTAAAAAGGTATACTAATAGACCCGAAGGGTCAGCAGAGCG
ATAAAATCAAGACAAATAAAAACAAGTAGTCTGTAGCCCTCCGCTCCCCT
CTGCACGCTATGCGAGGTTAAAATAAAATAAAATAAACTGGAGATATCAA
AATCACCAACCCCAGGGGTACACATCCCCGGGTCCTATCTTGAGTACCCT
ACACTGCCAGGGTATTCCGTGCCGGGTTCTCGCCGGCCAGGCAGACAAAT
CGAGTCCTCCACCCCGATTATAAAACGCAGAGATACATGCAGACATGGCA
CGGGGAAAGGAAAATATTCCCCGTGCTACCGATGTATCCCCGTCCTTCGA
AGTGCAGCACAGATCCAAGACAACGGTAGGGAGCGGAAACAGGGAAAGAG
GAAAAAAAAGGAAGGAAAAGAAAAAAAGACTAAGAAGAAACAAGACAGAG
TACAAACAAAAACACAAACAGACAAAGACCTAGTCTAACACCACCGAGAT
AGAAACTACACGTCATACCTCCTGGGGGGGGAAGGAGGAAAAAATAGTAA
TAATATTAATGAGGGAGGCGTCAATCCGTTACGTGTGGTGCAACACGATC
CATCAACCCTCCTTTGCTTTCTTCCTTCGCCGTTTCGTCCTTCCGTTGTC
CCTTTCCCGCCCCATTAGTTTTTGCCGCCTCTATACTATTCTTCTTGGTC
TTGCTGTCTCGTTTGGTTGCTCGTTGCCGGCTAGCCTCCTCCTCGACCTT
GTGCCAAGTGGTCTTAAACCTCTCAGCTCCCTTCACCACCCCCGCATGCC
ACGGCACTCCTCCCCGCACCTTCGCCGCTTCCGTCCAACGTGCTTTCGGT
ACTCCGAAAAAGCGTGGCTCGTCGGCCGTAGCGCCGTGCGTCGCCCCGAA
CACCTTGAAGTCGTCCTTCAGGCATATCATCTCCCAGTTCTGCTCCAGGC
ACCCCCTGCCCGGCTTCTCCACCCCCTCCAGCTCCCGGAACATCAACTGC
TCCGGGAGTCGCCCGTCCGGCTGCCTGGCGACGGCCCCCGCGAAAAGCAG
GCGCCGCTGTCGGACAGTCGCCTCCACGCTCTGGCACTCGACCCTCTTGA
GAGCCTGGGCGTAGGAGAGCTGCCGGTAGGTGCCGCTCTTGCGTCCGTAC
TCAATAACTCGTAGTATAGCAGCAGTATAGCAGCCGGTGATGCGTCGTCC
GCAGTAGCCGGTAGTGGTCGCTGCGCGGGGCCCATGTCATACAACCGTAG
AGCAGTGCCTCCATCGCCTCCGCCTCGAGCAGGCGGGTCTTGAGTCGAAA
CGGTGCTCCCGGCCTGTCGAAGAGCTCCCGGGCGTACCTCCTGATGCACG
CCCACGCCGCTTTGCTCCTGTAATTGATGTCCCGGGTGAGGTCGCCATGT
TCGTTGCCGAGGCCTCCCAAGTACCGGAACTCGGTCGCCTGGGCGTACCG
CTGCCCCGCTGCTTCGATGCTAAGCGGTGGAGGAGCAGGGGTGGGCGAGA
AAAATATATACCACTTGGTATATATAGAAGTATACCATACTCCATTTATC
ACATTTTTTATTTTTTTCCTCGCCCATTAATGTTTTTTCGTAGCCTGCCT
CCTCCTCTCCACTACAACTAGCTTGGCTACCATCCGGGGTCACACAGGAG
GGGTTGTCTCCACGTACCTCCTGCGGTGCATGCCTTTGATACTTTTTATC
GCGAGCAGGGTTCAGCACCCCTAGCCTCGTCAACAATGAAGTCGAAGTCG
TAATATGTACTCACAAGCGACATACGCAGCAAGTTTTCAATGTGAAGTAC
CAGGAACGAAAGTGAGAAAAAAACTCGCTTCGTCGGGACTCGAACCCATG
ACCTGGCGCTTAGTAGACATATGTATGATATCATATCGACGAACAGCAGC
AGGTGTTCGGCCCGATTATTACATCGAGGTGTCGATCGCTTGTCTCTTGT
GTCGAGAGGGTTTCTTTCTGGCCTGAAGGACGAGACAGATAGACAGACGG
ACAGACAGAGCATGATGCATGCTGCATGCTGCCGTTCAAAACTACAGCTT
GCAGCGAGATAAGCCTTCTTGGGTGCACCTTGCGTTTTTTCCCTTCTTGT
GGTGTGGTGCCTCCAAGGCCCCGTGCCGAAGTGTGTAACCACCGCTGAGA
CTACTATACTAACGGCGGGGTGAAAACATTGTTGTTCGACCACACCAGTA
GCGGCCGGTCTTTCTCAAAAACACAAAAAAAAATTGGCCATATTGGTTGA
AACATGCACAGCAGCCAGGGGAGGGCGTCTCATCTTCTTACGGCCATCGA
AAACTCTGGCTTAACAGGTCCGAGAGATGGCCGATGAGGCAATCAGGCAA
ATAGACACTGAGCGACAGCAGTGCCACGCCGTGTTCTAGAGGGTCGTAGA
CGTTTGTTCCTCTTTTGGTGGTTGATCTTTTCTGTCGCCGAATTCCAGTT
TGCAGCACCAAACGCCTGCTGCTGCTGCTGCTCTTTGTGTTGGTTTATTT
TGTTCATTTTGTTTTTTTGCTCACGGCAGTCTCGTCCCCGAGTCCTGCAA
CACCAGCAAGCACGCGGGCGTGTGCTGCTCTCCAACAGGAGAAGGGAGAG
GCAGCATCACATGCAAACATGTGGCCTAACCCAGCCCAGCCGACGCGACG
TTAGCGCCGTACCTACGCCGCGCTGCTAAATCTGTCGCCGCACGCCGCAC
AGCCGCACCGAACCGTAGTTCGCCCTGATGATCCCATGCCTGATGATCCC
ATGCCTGATGATCCCATGCCTGATGATCCCATGCCTGATGATCCCATGCC
TGATGATCCCATGCCTGATGATCCCATGCCTGATGATCCCATGCCTGATG
ATCCCATGCCTGATGATCCCATGCCTGATGATCCCATCATGCCCAAGTTG
CGAACGAGAATCCCGTTTTCACGGCGGAACCCCTCTCATGAATCGCCCCG
GCCTCGAAGCACCGGCAAGGCATGCATGGGTGGCATCACCATCACATCAC
ATCACATCACAGACAAGAAGTGGTGTGCACCCACAACACCTGCCCTGCCC
TGCCCTGCCCTGCCCTGCCCCTGCCCCTGCCCTGCTTGAGACGAAGTTGC
TGAATGCATCTAAGGTACATGTAGGTGTACCTCACTACATACGTATCAGT
ACCTCACAACACCTGCCGTGTTCTGATCGTTGCACCATCCATGTCGCAGG
TGCCTTTTTTTTTCGCGGGGGACGGGGCGGGGCGGCTTCAGGGGCCTAGC
AGCTCAAAGGTTTTGGCGGCCCTCAAGGCTTCAAAGGGG back to topCoding sequence (CDS) from alignment at C-linearis_contig7:3661257..3666195+ >mRNA_C-linearis_contig7.14600.1 ID=mRNA_C-linearis_contig7.14600.1|Name=mRNA_C-linearis_contig7.14600.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=618bp|location=Sequence derived from alignment at C-linearis_contig7:3661257..3666195+ (Chordaria linearis ClinC8C monoicous)
CGGAGCATTACTTGTGATTGTCTTGCTCGCGCCGGTGGCCGACCCCTTCT
TGATCCCCGGGGATTTTCACGCGTCGCATCACACCCGGATGCTGGTCTAC
AGGAGTCGCCACGCTCACCACAGGCGACACAGCGGCAGCGGCGACGCAGC
GGGCGGCTATTTGGCTATTCGTTGAACGTTGAAGGGCTACAATATCAGCG
CCTGTGGAACCAACGCGAGCGGAGCATTACTTGTGATTGTCTTGCTCGCG
CCGGTGGCCGACCCCTTCTTGATCCCCGGGGATTTTCACGCGTCGCATCA
CACCCGGATGCTGGTCTACAGGAGTCGCCACGCTCACCACAGGCGACACA
GCGGCAGCGGCGACGCAGCGGGCGGCTATTTGGCTATTCGTTGAACGTTG
AAGGGCTACAATATCAGCGCCTGTGGAACCAACGCGAGGTGCCTTTTTTT
TTCGCGGGGGACGGGGCGGGGCGGCTTCAGGGGCCTAGCAGCTCAAAGGT
TTTGGCGGCCCTCAAGGCTTCAAAGGGGGTGCCTTTTTTTTTCGCGGGGG
ACGGGGCGGGGCGGCTTCAGGGGCCTAGCAGCTCAAAGGTTTTGGCGGCC
CTCAAGGCTTCAAAGGGG back to top
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