mRNA_C-linearis_contig7.14532.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 190 bits (482), Expect = 4.100e-49 Identity = 242/440 (55.00%), Postives = 296/440 (67.27%), Query Frame = 1
Query: 181 MTSRQQSTRGPKNALHKAAFLGSTRGVLALLS-QGSFDVDQGCEDGATPLMLASYNDSPGVVRALLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAG-VFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVDA-RDAQDRAPLQLSLE--ACQPCSPRIMRLLIDAGANTSTPV---RIDTDRTVSFFNPLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTS----LGMMLPTLRRRSESRRRTLVRTMFRHSSK 1464
M QQ TRGP NALHKAA+ GS A+LS +G+ D+D G AT LM+A+ GVV ALL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LRAKA+PLL + G ++VPL+ A+ G+ +V +E++RQVGIRGCGGP+ G ALR A+ +H+ MA+L DAG V DTG AL+ A ++G AVKFL++R A AYV+ RD R P+ +++ A + CSP+I+RLL+DAGANT+ V RI + PL + T+L + DG+ +++Q L+ R LL R AVHA SWLW P A G TET ST+ L M P LRR+ +R L++T+FR+S K
Sbjct: 1 MPRPQQVTRGPMNALHKAAWDGSVEMTGAILSSRGAPDIDLGNPSAATALMIATVKGYAGVVNALLSKGANVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRAKANPLLC-SHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADA---DAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRG-VLLKTLFRYSRK 435
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 190 bits (482), Expect = 2.790e-48 Identity = 123/272 (45.22%), Postives = 169/272 (62.13%), Query Frame = 1
Query: 670 LRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVK---RFGGVARRGKAYVDARDAQDRAPLQLSLEACQPCSPRIMRLLIDAGANTSTPVRIDTDRTVSFFN--PLVYVTKLRNYQK--RDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTSLGMMLPTLRRRSESRRRTLVRTMFRHSSK 1464
LR A+PLL + T VPLD A GH++VV+EL++++GI GC + G +AL A+ NQH++IMAILT+AGV DTG+AL A GHE +VKFL++ + GG G AY++ARD PL + + C +PRI+R+L+DAGA+T++PV++ + FN PL + TKLR +K DGK +++ LEAI LLLR AVHA SWLWP P RA E P +L +MLP L+RR++ RR LV T+ R+S K
Sbjct: 260 LRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEG-AYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAF-TKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETD--PEPPLPALKLMLPILKRRTK-RRCGLVATLLRYSVK 526
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 184 bits (468), Expect = 4.630e-47 Identity = 169/427 (39.58%), Postives = 219/427 (51.29%), Query Frame = 1
Query: 193 QQSTRGPKNALHKAAFLGSTRGVLALLSQGSFDVDQGCEDGATPLMLASYNDSPGVVRALLD-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKA-YVDARDAQDRAPLQLSLEACQPCSPRIMRLLIDAGANTSTPVRIDTDRTVSFFNPLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARA-ARGSGSTETPSTSLGMMLPTLRRRSESRRRTLVRTMFRHSSK 1464
QQ GP N L AA GS + LL+ G+FD+DQG E G TPLM+AS P +VR LL+ XXXXXXXXXXXXXXXXXXXXXXXXXX L AKADPLL + + F+PLD A GH EVV EL+RQVGI GCGG + G NALR A+L ++IMAILTDAGV DTG AL+ A +G E +KFL+++ G +A Y++ + L L+ Q C PR+++LL++AGA+T++PV I F+ + R K ++ ++ N LE IR LLLRE AVHA SWLWP P+ A A+G+G T ST+ + + R R+ L+ + R+SSK
Sbjct: 8 QQWPHGPSNPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSL---LDGIQRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 181 bits (459), Expect = 6.230e-46 Identity = 215/420 (51.19%), Postives = 255/420 (60.71%), Query Frame = 1
Query: 193 QQSTRGPKNALHKAAFLGSTRGVLALLSQGSFDVDQGCEDGATPLMLASYNDSPGVVRALLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVDA-RDAQDRAPLQLSLEAC--QPCSPRIMRLLIDAGANTSTPVR--IDTDRTVSFFNPLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTS-----LGMMLPTLRRRSESR 1422
QQS R N LH+AA GST A+LS GS D+D G G TPLM A ND P VV LL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAKA+PLL +N +PLD A G VV ELL++ GIRGCGG T G AL++A++ H+++M LT AGV DTG AL+ A GH + VKFL+++ G AYV RD R PL +++ Q CSP+++RLL+DAGA+T++ VR I PL T+ + K + ++ LE IR LLLR AVHATSWLW VP A G+ +TET S+S L +LP LRRR+ R
Sbjct: 8 QQSPRVVINKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNL--AWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGR 425
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 178 bits (452), Expect = 4.580e-45 Identity = 201/435 (46.21%), Postives = 253/435 (58.16%), Query Frame = 1
Query: 193 QQSTRGPKNALHKAAFLGSTRGVLALLSQGSFDVDQGCEDGATPLMLASYNDSPGVVRALLD-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGK-----AYVDARDAQDRAPLQLSLEACQPCSPRIMRLLIDAGANTSTPVRIDTDR---TVSFFNPLVYVTKLRNYQKRDGK-IVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAA-RGSGSTETPSTSLGMMLPTLRRRSESRRRTLVRTMFRHSSK 1464
QQ RGP N LH AA GS +L+ G+FD+DQG E G T LMLAS +V +L+ XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX L AKADPLL + +G+TF+PLDA A GH EVV EL+RQVGI GCGG + G AL+ A+ +++NIM ILT+AGV DTG AL+ A +G E +KFL+++ AR K AYV+ RD PL L Q PR++RLL++AGA+T++PV + VS + + +R+ K G+ S +Q + LEAIR LLLR AVHA SWLWP + + RAA RG+ T ST++ + + RRR+ R+ L + R+SSK
Sbjct: 8 QQRPRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQ----ARARKTMDEAAYVNTRDRGGVTPL---LWGIQHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLA-ALLRYSSK 434
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 169 bits (429), Expect = 2.950e-42 Identity = 117/271 (43.17%), Postives = 160/271 (59.04%), Query Frame = 1
Query: 670 LRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFD-TGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVD-ARDAQDRAPLQLSLEACQ--PCSPRIMRLLIDAGANTSTPVRIDTDRTVSFFN--PLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTSLGMMLPTLRRRSESRRRTLVRTMFRHSSK 1464
L AKA+PLL + + +G++FVPL+ A G S VV ELLR+ GIR CGGP+ G +ALR+A++ V+IM++L DAGV D G ALL AV G E AV FL+++ R +YV+ ARD L S + PC+PRI R L+DAGA+T++ V++ R+ + N PL YV + +++Q LEA R +LLR AVHA SW+WP P AR A + + T L +LP LRRR+ RR L T+FR+S K
Sbjct: 138 LHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQ--QEERWQTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRA-GRRALLWDTLFRYSKK 405
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 169 bits (429), Expect = 4.760e-42 Identity = 219/430 (50.93%), Postives = 270/430 (62.79%), Query Frame = 1
Query: 181 MTSRQQSTRGPKNALHKAAFLGSTRGVLALLSQGSFDVDQGCEDGATPLMLASYNDSPGVVRALLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVDARDAQDRAPLQLSLEACQPCSPRIMRLLIDAGANTSTPVRI-DTDRTVSFFNPLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTE-TPSTSLGMMLPTLRRRSESRRRTLVRTMFRHSSK 1464
M+ Q+ RGP+N LHKAA GS++ +LL+ G D+DQG G TPLM A+ V++ LL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PLL +G TFVPLD A+ GH V +EL+++ GIRGC G + G +AL A+++QH+++MA+L DAGV DTG AL+ V G E A+KFL+++ G R RD + PL LS PCSPR++RLL+DAGA+ + VR+ D + + PL T+ + D + QQ L A R LLL+ VHATSWLW PA + TE T L LP + RRS +RR + +FR + K
Sbjct: 1 MSHLQRLARGPRNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLP-TRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPL-LSAVTTGPCSPRVVRLLVDAGADATLAVRVPDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRS-ARRGAALPGVFRLAKK 427
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 160 bits (404), Expect = 7.670e-39 Identity = 111/265 (41.89%), Postives = 150/265 (56.60%), Query Frame = 1
Query: 679 KADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVD-ARDAQDRAPLQLSLEACQPCSPRIMRLLIDAGANTSTPVRIDTDR--TVSFFNPLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTSLGMML---PTLRRRSESRRRTLV-RTMFR 1452
KA+ LLA + +G TFVPLD GHSEVV+EL Q+G+RGCGG + G +LR+A+ Q V+IM ILT GV DTG AL+ A ++ EE+VKFL++ G G YV+ D R PL ++EAC SPRI R LIDA A+T + V + T S PL + T K K +E+Q +L+AI LL + AVHA SWLW R + A G+ S+ T G +L PT+ R + +R +V R ++R
Sbjct: 155 KANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGG---GAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLW-RSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 155 bits (391), Expect = 6.420e-37 Identity = 219/421 (52.02%), Postives = 266/421 (63.18%), Query Frame = 1
Query: 181 MTSRQQSTRGPKNALHKAAFLGSTRGVLALLSQGSFDVDQGCEDGATPLMLASYNDSPGVVRALLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVD-ARDAQDRAPLQLSLEACQPCSPRIMRLLIDAGANTSTPVRIDT--DRTVSFFNPLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTSLGMMLPTLRRRSESRRRTL 1434
+++ Q RGP N LHKAA+ GS V ALLS GS D++QG G TPLMLA+ V ++LL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K GHSEVV+EL++Q+G+RGCGG + G +LR+A+ Q+V+IM ILT GV DTG AL+ A ++ EE+VKFL++ G G YV+ D R PL ++EAC SPRI R LID GA+T + V + + T S PL + T+ K GK +E+Q +L+AI LL + AVHA SWLW R +P A G+ S+ T+ G PTL+R S R T+
Sbjct: 22 VSTSQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQK-----------------------QHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGG---GTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLW-RSSDTPIGHAVGAASSRMKPTTAG---PTLKRMSTVLRTTV 412
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 153 bits (386), Expect = 2.190e-36 Identity = 112/276 (40.58%), Postives = 153/276 (55.43%), Query Frame = 1
Query: 670 LRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVDARDAQDRAPLQLSLEAC----QPCSPRIMRLLIDAGANTSTPVRIDTDRTVSFFN--PLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPS----PARAARGSGSTETPSTSLGMMLPTLRRRSESRRRTLVRT-MFRHSSK 1464
LRA A+PL+ T +PLD+ A G+ V++EL+++VGI GCGG +RG AL MA + V MA+LT AGV DTG+AL + G E +VK+L++ G AYV+ RD PL S+ C Q PR+ RLL++AGA+T+T +R V F+ PL + +K DG +S+Q+ LE IR LLL+ AVHA SWLWP P AA + +T + LG +LP LRRR +RR +V T + RH K
Sbjct: 154 LRANANPLITRAPLP---TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPG-AYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRR--ARRPGVVWTALCRHQRK 423 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig7.14532.1 >prot_C-linearis_contig7.14532.1 ID=prot_C-linearis_contig7.14532.1|Name=mRNA_C-linearis_contig7.14532.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=437bp MTSRQQSTRGPKNALHKAAFLGSTRGVLALLSQGSFDVDQGCEDGATPLMback to top mRNA from alignment at C-linearis_contig7:2929902..2932961- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig7.14532.1 ID=mRNA_C-linearis_contig7.14532.1|Name=mRNA_C-linearis_contig7.14532.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3060bp|location=Sequence derived from alignment at C-linearis_contig7:2929902..2932961- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig7:2929902..2932961- >mRNA_C-linearis_contig7.14532.1 ID=mRNA_C-linearis_contig7.14532.1|Name=mRNA_C-linearis_contig7.14532.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2622bp|location=Sequence derived from alignment at C-linearis_contig7:2929902..2932961- (Chordaria linearis ClinC8C monoicous)back to top |