mRNA_C-linearis_contig7.14532.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig7.14532.1
Unique NamemRNA_C-linearis_contig7.14532.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 4.100e-49
Identity = 242/440 (55.00%), Postives = 296/440 (67.27%), Query Frame = 1
Query:  181 MTSRQQSTRGPKNALHKAAFLGSTRGVLALLS-QGSFDVDQGCEDGATPLMLASYNDSPGVVRALLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAG-VFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVDA-RDAQDRAPLQLSLE--ACQPCSPRIMRLLIDAGANTSTPV---RIDTDRTVSFFNPLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTS----LGMMLPTLRRRSESRRRTLVRTMFRHSSK 1464
            M   QQ TRGP NALHKAA+ GS     A+LS +G+ D+D G    AT LM+A+     GVV ALL       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LRAKA+PLL   +   G ++VPL+  A+ G+ +V +E++RQVGIRGCGGP+ G  ALR A+  +H+  MA+L DAG V DTG AL+ A ++G   AVKFL++R    A    AYV+  RD   R P+  +++  A + CSP+I+RLL+DAGANT+  V   RI      +   PL + T+L    + DG+  +++Q   L+  R LL R  AVHA SWLW    P     A G   TET ST+    L  M P LRR+  +R   L++T+FR+S K
Sbjct:    1 MPRPQQVTRGPMNALHKAAWDGSVEMTGAILSSRGAPDIDLGNPSAATALMIATVKGYAGVVNALLSKGANVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRAKANPLLC-SHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADA---DAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRG-VLLKTLFRYSRK 435          
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 2.790e-48
Identity = 123/272 (45.22%), Postives = 169/272 (62.13%), Query Frame = 1
Query:  670 LRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVK---RFGGVARRGKAYVDARDAQDRAPLQLSLEACQPCSPRIMRLLIDAGANTSTPVRIDTDRTVSFFN--PLVYVTKLRNYQK--RDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTSLGMMLPTLRRRSESRRRTLVRTMFRHSSK 1464
            LR  A+PLL   +     T VPLD  A  GH++VV+EL++++GI GC   + G +AL  A+ NQH++IMAILT+AGV DTG+AL  A   GHE +VKFL++   + GG    G AY++ARD     PL +  + C   +PRI+R+L+DAGA+T++PV++   +    FN  PL + TKLR  +K   DGK  +++    LEAI  LLLR  AVHA SWLWP   P   RA       E P  +L +MLP L+RR++ RR  LV T+ R+S K
Sbjct:  260 LRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEG-AYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAF-TKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETD--PEPPLPALKLMLPILKRRTK-RRCGLVATLLRYSVK 526          
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 4.630e-47
Identity = 169/427 (39.58%), Postives = 219/427 (51.29%), Query Frame = 1
Query:  193 QQSTRGPKNALHKAAFLGSTRGVLALLSQGSFDVDQGCEDGATPLMLASYNDSPGVVRALLD-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKA-YVDARDAQDRAPLQLSLEACQPCSPRIMRLLIDAGANTSTPVRIDTDRTVSFFNPLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARA-ARGSGSTETPSTSLGMMLPTLRRRSESRRRTLVRTMFRHSSK 1464
            QQ   GP N L  AA  GS +    LL+ G+FD+DQG E G TPLM+AS    P +VR LL+         XXXXXXXXXXXXXXXXXXXXXXXXXX                                                               L AKADPLL   +    + F+PLD  A  GH EVV EL+RQVGI GCGG + G NALR A+L   ++IMAILTDAGV DTG AL+ A  +G E  +KFL+++  G     +A Y++  +      L   L+  Q C PR+++LL++AGA+T++PV I        F+       +     R  K ++ ++ N LE IR LLLRE AVHA SWLWP   P+   A A+G+G T   ST+    +  +  R    R+ L+  + R+SSK
Sbjct:    8 QQWPHGPSNPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSL---LDGIQRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431          
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 6.230e-46
Identity = 215/420 (51.19%), Postives = 255/420 (60.71%), Query Frame = 1
Query:  193 QQSTRGPKNALHKAAFLGSTRGVLALLSQGSFDVDQGCEDGATPLMLASYNDSPGVVRALLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVDA-RDAQDRAPLQLSLEAC--QPCSPRIMRLLIDAGANTSTPVR--IDTDRTVSFFNPLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTS-----LGMMLPTLRRRSESR 1422
            QQS R   N LH+AA  GST    A+LS GS D+D G   G TPLM A  ND P VV  LL                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAKA+PLL  +N       +PLD  A  G   VV ELL++ GIRGCGG T G  AL++A++  H+++M  LT AGV DTG AL+ A   GH + VKFL+++  G      AYV   RD   R PL  +++    Q CSP+++RLL+DAGA+T++ VR  I          PL   T+    +    K + ++    LE IR LLLR  AVHATSWLW   VP     A G+ +TET S+S     L  +LP LRRR+  R
Sbjct:    8 QQSPRVVINKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNL--AWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGR 425          
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 4.580e-45
Identity = 201/435 (46.21%), Postives = 253/435 (58.16%), Query Frame = 1
Query:  193 QQSTRGPKNALHKAAFLGSTRGVLALLSQGSFDVDQGCEDGATPLMLASYNDSPGVVRALLD-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGK-----AYVDARDAQDRAPLQLSLEACQPCSPRIMRLLIDAGANTSTPVRIDTDR---TVSFFNPLVYVTKLRNYQKRDGK-IVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAA-RGSGSTETPSTSLGMMLPTLRRRSESRRRTLVRTMFRHSSK 1464
            QQ  RGP N LH AA  GS      +L+ G+FD+DQG E G T LMLAS      +V  +L+        XXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXX                            L AKADPLL  +   +G+TF+PLDA A  GH EVV EL+RQVGI GCGG + G  AL+ A+  +++NIM ILT+AGV DTG AL+ A  +G E  +KFL+++    AR  K     AYV+ RD     PL   L   Q   PR++RLL++AGA+T++PV +        VS     + +  +R+  K  G+   S +Q + LEAIR LLLR  AVHA SWLWP  + +  RAA RG+  T   ST++ + +   RRR+  R+  L   + R+SSK
Sbjct:    8 QQRPRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQ----ARARKTMDEAAYVNTRDRGGVTPL---LWGIQHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLA-ALLRYSSK 434          
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 2.950e-42
Identity = 117/271 (43.17%), Postives = 160/271 (59.04%), Query Frame = 1
Query:  670 LRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFD-TGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVD-ARDAQDRAPLQLSLEACQ--PCSPRIMRLLIDAGANTSTPVRIDTDRTVSFFN--PLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTSLGMMLPTLRRRSESRRRTLVRTMFRHSSK 1464
            L AKA+PLL + +  +G++FVPL+  A  G S VV ELLR+ GIR CGGP+ G +ALR+A++   V+IM++L DAGV D  G ALL AV  G E AV FL+++     R   +YV+ ARD      L  S    +  PC+PRI R L+DAGA+T++ V++   R+ +  N  PL YV      +       +++Q   LEA R +LLR  AVHA SW+WP   P  AR A    + +   T L  +LP LRRR+  RR  L  T+FR+S K
Sbjct:  138 LHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQ--QEERWQTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRA-GRRALLWDTLFRYSKK 405          
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 4.760e-42
Identity = 219/430 (50.93%), Postives = 270/430 (62.79%), Query Frame = 1
Query:  181 MTSRQQSTRGPKNALHKAAFLGSTRGVLALLSQGSFDVDQGCEDGATPLMLASYNDSPGVVRALLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVDARDAQDRAPLQLSLEACQPCSPRIMRLLIDAGANTSTPVRI-DTDRTVSFFNPLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTE-TPSTSLGMMLPTLRRRSESRRRTLVRTMFRHSSK 1464
            M+  Q+  RGP+N LHKAA  GS++   +LL+ G  D+DQG   G TPLM A+      V++ LL+             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      PLL      +G TFVPLD  A+ GH  V +EL+++ GIRGC G + G +AL  A+++QH+++MA+L DAGV DTG AL+  V  G E A+KFL+++ G    R       RD +   PL LS     PCSPR++RLL+DAGA+ +  VR+ D     + + PL   T+    +  D    + QQ   L A R LLL+   VHATSWLW      PA   +    TE T    L   LP + RRS +RR   +  +FR + K
Sbjct:    1 MSHLQRLARGPRNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLP-TRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPL-LSAVTTGPCSPRVVRLLVDAGADATLAVRVPDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRS-ARRGAALPGVFRLAKK 427          
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 7.670e-39
Identity = 111/265 (41.89%), Postives = 150/265 (56.60%), Query Frame = 1
Query:  679 KADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVD-ARDAQDRAPLQLSLEACQPCSPRIMRLLIDAGANTSTPVRIDTDR--TVSFFNPLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTSLGMML---PTLRRRSESRRRTLV-RTMFR 1452
            KA+ LLA +   +G TFVPLD     GHSEVV+EL  Q+G+RGCGG + G  +LR+A+  Q V+IM ILT  GV DTG AL+ A ++  EE+VKFL++   G    G  YV+   D   R PL  ++EAC   SPRI R LIDA A+T + V +      T S   PL + T      K   K  +E+Q  +L+AI  LL +  AVHA SWLW R   +    A G+ S+    T  G +L   PT+ R +  +R  +V R ++R
Sbjct:  155 KANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGG---GAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLW-RSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415          
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 6.420e-37
Identity = 219/421 (52.02%), Postives = 266/421 (63.18%), Query Frame = 1
Query:  181 MTSRQQSTRGPKNALHKAAFLGSTRGVLALLSQGSFDVDQGCEDGATPLMLASYNDSPGVVRALLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVD-ARDAQDRAPLQLSLEACQPCSPRIMRLLIDAGANTSTPVRIDT--DRTVSFFNPLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTSLGMMLPTLRRRSESRRRTL 1434
            +++ Q   RGP N LHKAA+ GS   V ALLS GS D++QG   G TPLMLA+      V ++LL+           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   K                         GHSEVV+EL++Q+G+RGCGG + G  +LR+A+  Q+V+IM ILT  GV DTG AL+ A ++  EE+VKFL++   G    G  YV+   D   R PL  ++EAC   SPRI R LID GA+T + V +    + T S   PL + T+     K  GK  +E+Q  +L+AI  LL +  AVHA SWLW R   +P   A G+ S+    T+ G   PTL+R S   R T+
Sbjct:   22 VSTSQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQK-----------------------QHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGG---GTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLW-RSSDTPIGHAVGAASSRMKPTTAG---PTLKRMSTVLRTTV 412          
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 2.190e-36
Identity = 112/276 (40.58%), Postives = 153/276 (55.43%), Query Frame = 1
Query:  670 LRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQELLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNAVQHGHEEAVKFLVKRFGGVARRGKAYVDARDAQDRAPLQLSLEAC----QPCSPRIMRLLIDAGANTSTPVRIDTDRTVSFFN--PLVYVTKLRNYQKRDGKIVSEQQWNTLEAIRNLLLREGAVHATSWLWPRVVPS----PARAARGSGSTETPSTSLGMMLPTLRRRSESRRRTLVRT-MFRHSSK 1464
            LRA A+PL+         T +PLD+ A  G+  V++EL+++VGI GCGG +RG  AL MA   + V  MA+LT AGV DTG+AL  +   G E +VK+L++        G AYV+ RD     PL  S+  C    Q   PR+ RLL++AGA+T+T +R      V  F+  PL     +   +K DG  +S+Q+   LE IR LLL+  AVHA SWLWP         P  AA  + +T   +  LG +LP LRRR  +RR  +V T + RH  K
Sbjct:  154 LRANANPLITRAPLP---TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPG-AYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRR--ARRPGVVWTALCRHQRK 423          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1H7_ECTSI4.100e-4955.00EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D7FT11_ECTSI2.790e-4845.22EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KQV0_9PHAE4.630e-4739.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVK3_ECTSI6.230e-4651.19EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KJA9_9PHAE4.580e-4546.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVU3_ECTSI2.950e-4243.17EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LL76_ECTSI4.760e-4250.93EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K037_9PHAE7.670e-3941.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1U9_ECTSI6.420e-3752.02EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LJF9_ECTSI2.190e-3640.58EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2929902..2932961 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score194.9
Seed ortholog evalue7.9e-47
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionEsV-1-199
Ec32 orthologEc-07_003230.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size2616
Cds size1311
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14532.1prot_C-linearis_contig7.14532.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig7 2931027..2932781 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930316.739347-UTR-C-linearis_contig7:2929901..29310261622930316.739347-UTR-C-linearis_contig7:2929901..2931026Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 2929902..2931026 -
1690881008.7835226-UTR-C-linearis_contig7:2929901..29310261690881008.7835226-UTR-C-linearis_contig7:2929901..2931026Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 2929902..2931026 -
1622930316.7899888-UTR-C-linearis_contig7:2932781..29329611622930316.7899888-UTR-C-linearis_contig7:2932781..2932961Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 2932782..2932961 -
1690881008.818079-UTR-C-linearis_contig7:2932781..29329611690881008.818079-UTR-C-linearis_contig7:2932781..2932961Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 2932782..2932961 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930316.757973-CDS-C-linearis_contig7:2931026..29310661622930316.757973-CDS-C-linearis_contig7:2931026..2931066Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2931027..2931066 -
1690881008.7984328-CDS-C-linearis_contig7:2931026..29310661690881008.7984328-CDS-C-linearis_contig7:2931026..2931066Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2931027..2931066 -
1622930316.7742922-CDS-C-linearis_contig7:2931510..29327811622930316.7742922-CDS-C-linearis_contig7:2931510..2932781Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2931511..2932781 -
1690881008.8084576-CDS-C-linearis_contig7:2931510..29327811690881008.8084576-CDS-C-linearis_contig7:2931510..2932781Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2931511..2932781 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig7.14532.1

>prot_C-linearis_contig7.14532.1 ID=prot_C-linearis_contig7.14532.1|Name=mRNA_C-linearis_contig7.14532.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=437bp
MTSRQQSTRGPKNALHKAAFLGSTRGVLALLSQGSFDVDQGCEDGATPLM
LASYNDSPGVVRALLDAGASVSLAKDDGITALFSAADSGSLAVTKMLVEA
GADLETPVIDGGTSLHVAAEEGHTAVISALVEAGASTGSRRRDGATPLYL
AARTGRAEAVRLLLRAKADPLLAFMNYEAGQTFVPLDAGAMFGHSEVVQE
LLRQVGIRGCGGPTRGYNALRMASLNQHVNIMAILTDAGVFDTGEALLNA
VQHGHEEAVKFLVKRFGGVARRGKAYVDARDAQDRAPLQLSLEACQPCSP
RIMRLLIDAGANTSTPVRIDTDRTVSFFNPLVYVTKLRNYQKRDGKIVSE
QQWNTLEAIRNLLLREGAVHATSWLWPRVVPSPARAARGSGSTETPSTSL
GMMLPTLRRRSESRRRTLVRTMFRHSSKKDRAPPTG*
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mRNA from alignment at C-linearis_contig7:2929902..2932961-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig7.14532.1 ID=mRNA_C-linearis_contig7.14532.1|Name=mRNA_C-linearis_contig7.14532.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3060bp|location=Sequence derived from alignment at C-linearis_contig7:2929902..2932961- (Chordaria linearis ClinC8C monoicous)
GGTGCGCATGCGTTGAGCAAAAGGGCGAGTGTGCGAGCACACGCCCAGAT CGCGATACCCGGAGTGCGTGGGAACTGCGTGTGCACACCACCACGGGGTC ATTATCCTCTTCAACAACGGTGACAGCATCCACCCGCCTTTGCAACACGC CCCGTTCCGGCCTTCTGCCAAACACACGAGATGACTTCTCGGCAGCAGAG TACGCGGGGCCCTAAGAACGCCCTCCACAAGGCGGCATTCCTCGGCTCCA CCAGGGGCGTGTTGGCCCTGCTTTCACAGGGCTCCTTCGACGTCGACCAA GGCTGCGAAGATGGCGCGACCCCTCTCATGCTCGCGAGCTACAACGACAG CCCGGGGGTGGTTCGGGCCCTGCTGGACGCCGGGGCATCTGTGTCGCTAG CAAAGGACGACGGCATCACCGCCCTGTTCTCCGCGGCCGACTCCGGAAGC CTGGCCGTCACAAAGATGTTGGTGGAGGCGGGGGCAGACCTTGAGACCCC CGTCATCGACGGCGGCACGTCGCTTCACGTGGCCGCGGAGGAGGGACACA CCGCGGTGATCAGCGCGTTGGTCGAGGCGGGCGCGAGCACCGGAAGCCGC AGGCGGGACGGGGCGACGCCGCTGTACCTCGCGGCGCGAACGGGACGCGC GGAGGCCGTCCGGTTGCTCCTGCGCGCCAAGGCGGACCCGCTGCTGGCGT TCATGAATTACGAGGCGGGGCAGACGTTCGTCCCGCTGGACGCCGGCGCC ATGTTCGGCCACTCCGAAGTGGTACAGGAGCTGCTTCGACAGGTTGGGAT CCGCGGTTGTGGCGGCCCGACCCGCGGCTACAATGCTCTCCGCATGGCAT CGCTCAATCAACACGTGAACATCATGGCCATTCTGACGGACGCCGGGGTG TTTGACACGGGGGAAGCTCTGCTCAACGCCGTCCAGCACGGGCACGAGGA AGCGGTGAAGTTCCTCGTGAAGCGGTTCGGGGGGGTGGCCAGGAGGGGCA AGGCGTACGTGGACGCGCGCGACGCGCAGGACCGAGCGCCTCTGCAGCTG AGCCTGGAGGCTTGCCAGCCGTGCTCCCCCAGGATCATGCGGCTGCTCAT CGACGCCGGCGCGAACACATCCACGCCGGTCCGAATCGACACCGACCGAA CGGTGTCGTTTTTCAACCCGCTGGTTTACGTGACCAAGCTGCGCAACTAC CAGAAAAGGGACGGCAAGATCGTGTCGGAGCAGCAGTGGAACACGCTCGA GGCCATCCGGAACCTGCTGCTGAGGGAGGGGGCGGTTCATGCCACATCTT GGCTGTGGCCGAGGGTTGTCCCCTCCCCCGCGCGGGCGGCGAGGGGTAGC GGCAGCACCGAGACGCCTTCGACGTCGCTGGGGATGATGCTGCCGACCCT GAGGCGACGGAGTGAAAGCCGTCGCCGCACCCTCGTTCGGACCATGTTTA GGTGTGTGGCCCATTTATACAAGTATGTTAAGGGTATTGTCGTGCGCTGG TTGCAGCGGGTTGTGTCCCGATCACTGATGATGATGATGATGATGCAGCT TCAGCAGTAGTAGTAATTGTCGCCGCGTTTCGAACGTGTGCACCTTTGGC TTGGGCCGCTTGAACGGCATGATCCTGCATCTTGGAGCCCCCTTGGCCAT CTAGACTGATGTGCTCGCTGTGCTACCCGTCCGCCCTGTCTTGCGCCCCC CCCCCCAGCTGGAATCGGACCAATCTTGTCGCAAAAGCCGTTGAGGAGCC CGAGTGCCGACTCAGTGTCGCCTGTTGCGCGACCACGGTGCCCCTCTCTT GTTTCTGTCTCTCGAAAGCGACGACTAGTGAACCATGTTATGTATGTTGC GCGCGTCGCTTGTCGTGTTGTCACGCCCCGCGTGCTTTCTTTTAGGCACT CGTCGAAGAAAGACCGGGCTCCACCGACGGGGTGAGGAGAGCGGCCATGG CGCTGCCACGTTAGCAGTTTCATCAGCACCAGGGTACAGCGCGCCCTGGT TTTGCCTGGCCTGGGAGGTGGGGAAACTTCACTGCTGTCGAACGATGCGT CGTTTCTTCGCGGGACATACTTGAGGCGTTGAGACGGATGTTGCCAAATA GTCATTGCGCCCGACGGATGCGGAACAGATAAGCGGGGAGCGGTTTTGTT GTAGGGGGTAACAGAGTGCGCGCTGTTTGAGGTGGGTATGTAGTGCACGC GATGTGTTCAGTCGAGGCCGGGGCTGTACGGGGTATGTCATGACGAGCCG CTCGAAGGGGGGTGTCTTGATATTTTCGTGGTTCGCCATGAGACACGCTC GTGTTTGTGCGTTGCATACTTGTATGCATATCTACAGGTATACGGAGAGG GAAAGGGAAACAGTTGTCATTCCTGTTGGGGAGGCATGCTGCAGACTTGA TATTTTGATAATCACCTGGGGTCGCCCCACCCAGCCTCTCGCCTAAATCC CGCTGTTCTCCGTCTCTCCGGGTTGAGATAATGGAGGAAAGAAGGAGCCA GGCTTGCGTGTAGTACGAAAGTTAGCCGTGAGGAAAAGGCGTACACACAC AAACCCAAGTGAGGGTGGAGAATTTCTGGGAGCATCACACATAGATGTAT GATGGTTGAGAAGCAAGCGTTCGTGTGAAGAAATGGAAACACAACGAGAG GGAGAAGCGTTAAATGCACTGCTTGCTGTACGTGTGTGGATTGAAAAAGA GGGTGTCGGAAGCGATGGCAAATCCGGGGCAAGGGCTCTGCGAATACTAA CCCTACGGCGGTAGTAGGGACGGAGGGTGGATGCGCGTGATGGATGGGGA GAAAATATCAATCTGCCCCGTGCTGGGGGGGCATGCTGCAGGTTTTTACT TTGGTCGGCGCTTGCTTCGCCGCTCCTTGTTGCGAGGGCTGACCGCATGG GAGATGTAGATAGCTCTAAAACGAGCCCATGATCTAGGTTGTCGTGCAAT CTGCTCAGTTTCGCTCCTTTGCTGGTCGGCTGTTGGTGGTGCGGCATGAA AGGCATGCCGTGTACCGGTAGGTTTTTGCCCTGGATTGAATGCAATCATT TTTCCTTCCT
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Coding sequence (CDS) from alignment at C-linearis_contig7:2929902..2932961-

>mRNA_C-linearis_contig7.14532.1 ID=mRNA_C-linearis_contig7.14532.1|Name=mRNA_C-linearis_contig7.14532.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2622bp|location=Sequence derived from alignment at C-linearis_contig7:2929902..2932961- (Chordaria linearis ClinC8C monoicous)
ATGACTTCTCGGCAGCAGAGTACGCGGGGCCCTAAGAACGCCCTCCACAA
GGCGGCATTCCTCGGCTCCACCAGGGGCGTGTTGGCCCTGCTTTCACAGG
GCTCCTTCGACGTCGACCAAGGCTGCGAAGATGGCGCGACCCCTCTCATG
CTCGCGAGCTACAACGACAGCCCGGGGGTGGTTCGGGCCCTGCTGGACGC
CGGGGCATCTGTGTCGCTAGCAAAGGACGACGGCATCACCGCCCTGTTCT
CCGCGGCCGACTCCGGAAGCCTGGCCGTCACAAAGATGTTGGTGGAGGCG
GGGGCAGACCTTGAGACCCCCGTCATCGACGGCGGCACGTCGCTTCACGT
GGCCGCGGAGGAGGGACACACCGCGGTGATCAGCGCGTTGGTCGAGGCGG
GCGCGAGCACCGGAAGCCGCAGGCGGGACGGGGCGACGCCGCTGTACCTC
GCGGCGCGAACGGGACGCGCGGAGGCCGTCCGGTTGCTCCTGCGCGCCAA
GGCGGACCCGCTGCTGGCGTTCATGAATTACGAGGCGGGGCAGACGTTCG
TCCCGCTGGACGCCGGCGCCATGTTCGGCCACTCCGAAGTGGTACAGGAG
CTGCTTCGACAGGTTGGGATCCGCGGTTGTGGCGGCCCGACCCGCGGCTA
CAATGCTCTCCGCATGGCATCGCTCAATCAACACGTGAACATCATGGCCA
TTCTGACGGACGCCGGGGTGTTTGACACGGGGGAAGCTCTGCTCAACGCC
GTCCAGCACGGGCACGAGGAAGCGGTGAAGTTCCTCGTGAAGCGGTTCGG
GGGGGTGGCCAGGAGGGGCAAGGCGTACGTGGACGCGCGCGACGCGCAGG
ACCGAGCGCCTCTGCAGCTGAGCCTGGAGGCTTGCCAGCCGTGCTCCCCC
AGGATCATGCGGCTGCTCATCGACGCCGGCGCGAACACATCCACGCCGGT
CCGAATCGACACCGACCGAACGGTGTCGTTTTTCAACCCGCTGGTTTACG
TGACCAAGCTGCGCAACTACCAGAAAAGGGACGGCAAGATCGTGTCGGAG
CAGCAGTGGAACACGCTCGAGGCCATCCGGAACCTGCTGCTGAGGGAGGG
GGCGGTTCATGCCACATCTTGGCTGTGGCCGAGGGTTGTCCCCTCCCCCG
CGCGGGCGGCGAGGGGTAGCGGCAGCACCGAGACGCCTTCGACGTCGCTG
GGGATGATGCTGCCGACCCTGAGGCGACGGAGTGAAAGCCGTCGCCGCAC
CCTCGTTCGGACCATGTTTAGATGACTTCTCGGCAGCAGAGTACGCGGGG
CCCTAAGAACGCCCTCCACAAGGCGGCATTCCTCGGCTCCACCAGGGGCG
TGTTGGCCCTGCTTTCACAGGGCTCCTTCGACGTCGACCAAGGCTGCGAA
GATGGCGCGACCCCTCTCATGCTCGCGAGCTACAACGACAGCCCGGGGGT
GGTTCGGGCCCTGCTGGACGCCGGGGCATCTGTGTCGCTAGCAAAGGACG
ACGGCATCACCGCCCTGTTCTCCGCGGCCGACTCCGGAAGCCTGGCCGTC
ACAAAGATGTTGGTGGAGGCGGGGGCAGACCTTGAGACCCCCGTCATCGA
CGGCGGCACGTCGCTTCACGTGGCCGCGGAGGAGGGACACACCGCGGTGA
TCAGCGCGTTGGTCGAGGCGGGCGCGAGCACCGGAAGCCGCAGGCGGGAC
GGGGCGACGCCGCTGTACCTCGCGGCGCGAACGGGACGCGCGGAGGCCGT
CCGGTTGCTCCTGCGCGCCAAGGCGGACCCGCTGCTGGCGTTCATGAATT
ACGAGGCGGGGCAGACGTTCGTCCCGCTGGACGCCGGCGCCATGTTCGGC
CACTCCGAAGTGGTACAGGAGCTGCTTCGACAGGTTGGGATCCGCGGTTG
TGGCGGCCCGACCCGCGGCTACAATGCTCTCCGCATGGCATCGCTCAATC
AACACGTGAACATCATGGCCATTCTGACGGACGCCGGGGTGTTTGACACG
GGGGAAGCTCTGCTCAACGCCGTCCAGCACGGGCACGAGGAAGCGGTGAA
GTTCCTCGTGAAGCGGTTCGGGGGGGTGGCCAGGAGGGGCAAGGCGTACG
TGGACGCGCGCGACGCGCAGGACCGAGCGCCTCTGCAGCTGAGCCTGGAG
GCTTGCCAGCCGTGCTCCCCCAGGATCATGCGGCTGCTCATCGACGCCGG
CGCGAACACATCCACGCCGGTCCGAATCGACACCGACCGAACGGTGTCGT
TTTTCAACCCGCTGGTTTACGTGACCAAGCTGCGCAACTACCAGAAAAGG
GACGGCAAGATCGTGTCGGAGCAGCAGTGGAACACGCTCGAGGCCATCCG
GAACCTGCTGCTGAGGGAGGGGGCGGTTCATGCCACATCTTGGCTGTGGC
CGAGGGTTGTCCCCTCCCCCGCGCGGGCGGCGAGGGGTAGCGGCAGCACC
GAGACGCCTTCGACGTCGCTGGGGATGATGCTGCCGACCCTGAGGCGACG
GAGTGAAAGCCGTCGCCGCACCCTCGTTCGGACCATGTTTAGGCACTCGT
CGAAGAAAGACCGGGCTCCACCGACGGGGTGAGCACTCGTCGAAGAAAGA
CCGGGCTCCACCGACGGGGTGA
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