mRNA_C-linearis_contig7.14465.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: D7G0N0_ECTSI (Enkurin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N0_ECTSI) HSP 1 Score: 348 bits (894), Expect = 2.590e-118 Identity = 185/241 (76.76%), Postives = 197/241 (81.74%), Query Frame = 1
Query: 67 AESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQRKAKGSMFGIKEGKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSR 789
AESIYN+LP +KEET+KPPMYKATFDHSRK+ STFDQRKAKG MFGIKEGKRS EPR+FLRVGEG EARRRAGKRPELPKI H GSGG R G G++RGLQ+LP RMKPPVPRR E PTMGLHSAKNFVTSNAVE ILAVP NRRRPPIDYLKKEDFGRVPDYL VQAEVRAENEMVEEFVREQMGIS IA+ + +PSEEQAELVDKLKAKWD+VN R
Sbjct: 2 AESIYNLLPEIKEETVKPPMYKATFDHSRKVPYSTFDQRKAKGGMFGIKEGKRSTEPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSSAGWASR--GPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRPPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEE----IPEMPSEEQAELVDKLKAKWDDVNCR 236
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: A0A835YSE5_9STRA (Enkurin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSE5_9STRA) HSP 1 Score: 158 bits (400), Expect = 8.390e-44 Identity = 105/284 (36.97%), Postives = 144/284 (50.70%), Query Frame = 1
Query: 64 GAESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQRKAKGSMFGIKEGKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEHGRMAAKARLEGELDDIEADLSKLTKGPVAV 915
G E+I+N+LPR + + KPP Y++ FD + STF + G ++G ++G S +P +L+ G G +GG +R ERG + K VP +E P MG+ + KNF+T+NAV AILAVP R P IDYL KED+G+VP YLG ++ EV +P +E+ EL+D LK+KWD VN+RYQ+L HQTFFE GR+ K LE LD IEAD+ K+ KGP+ V
Sbjct: 5 GEETIFNLLPREEVKAEKPPRYRSLFDPKSPVPYSTF--KNTGGGVYGKRDGG-SHKPDVYLKRGTGS---------------------AGG--------PSHTVRSTPEKRPERGEDL----RKAAVPLAKERPVMGVKADKNFITANAVNAILAVPKTRTPPTIDYLAKEDYGKVPAYLGQIKEEVEP-----------------------------MPEDERLELLDALKSKWDAVNARYQKLCHQTFFERGRLEQKKSLEKMLDAIEADIEKIGKGPIMV 223
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: A0A225WDZ9_9STRA (Enkurin domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDZ9_9STRA) HSP 1 Score: 148 bits (374), Expect = 3.200e-39 Identity = 107/292 (36.64%), Postives = 153/292 (52.40%), Query Frame = 1
Query: 70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQRKAKGSMFGIKEGKRSMEPRNFLRVGEGIE---ARRRAGKRPELPKISHF---GSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNR---RRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEH-GRMAAKARLEGELDDIEADLSKLTKGPVAV 915
E IYN++P+V E +KP Y++ FD K+Q + G+ FG++ GK +E N L + +E + R G+ P P F G S + AG P +PPV +R++ P MGL SAKN++T+NAVE ILA+P NR R Y+KKEDFG+VP YLG V+ E+ EN M+EEFVR+ + + + + E+ LVD LK+KWD VN++YQ+L H F+ G++ K E ELD +E D+ L KG V +
Sbjct: 5 ECIYNLIPKVHVEPVKPERYRSRFDP--KVQPT--------GTTFGVR-GKTKLEGAN-LGAAQKMEKPASARGFGRLPAKPDPKSFTRKGERSATAVVSRKRDDELIVVFDSSAGKFN----YPGPSRPPVVKRDDKPIMGLKSAKNYITANAVETILAIPGNRARVRNEQPQYMKKEDFGQVPRYLGQVKDEIERENSMIEEFVRQNHDLM---DEENRDRVEDMDENERLALVDALKSKWDHVNAKYQKLCHNVVFDTLGKVRRKETFEKELDQLEKDIQLLEKGHVVI 277
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: A0A067BZX0_SAPPC (Enkurin domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BZX0_SAPPC) HSP 1 Score: 145 bits (365), Expect = 4.100e-38 Identity = 107/297 (36.03%), Postives = 148/297 (49.83%), Query Frame = 1
Query: 70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFD---QRKAKGSMFGIKEGKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRM------KPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRR----PPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFE-HGRMAAKARLEGELDDIEADLSKLTKGPVAVV 918
E IYN++P+V KP Y +T D + STF + K GS G ++ K E GK PE P F ++++ + + PTR K V + +E P MGL ++KNF+T+NAVEAIL VP NR R PP+ Y K DFG+VP+YLG V+ E+ ENEM+EEFVR+ I E + L +E+A+L+ LKAKWD VN +YQ+L H F+ G++ K E EL +E D+ L+KG VA+V
Sbjct: 5 ECIYNLIPKVVVAPEKPKRYHSTHDPQTQPTASTFGLHGKTKLLGSNLGPEKPKSPPEKAKTF------------GKLPEQPNPKDF------------------IKKQSKCKMP---ESKPTRFNYNGPKKAAVVKADEKPVMGLKTSKNFITANAVEAILDVPGNRARAKKEPPV-YRHKPDFGKVPEYLGEVKQEIEQENEMIEEFVRQNKNILADQEPKVEP----LDDDERAKLISALKAKWDHVNQKYQKLCHNVSFDTQGKVRRKETYEKELTQLEKDIELLSKGGVAIV 263
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: K3W8L4_GLOUD (Enkurin domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8L4_GLOUD) HSP 1 Score: 144 bits (364), Expect = 6.730e-38 Identity = 102/302 (33.77%), Postives = 143/302 (47.35%), Query Frame = 1
Query: 70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFD----------------QRKAKGSMFGIKEGKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRRP---PIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEH-GRMAAKARLEGELDDIEADLSKLTKGPVAV 915
E I+N++P+V + +KP Y++ D + S+F + + GS G +P+ F++ G+ A K+P K ++ GS KP + +R+E P MGL SAKNFVT+NAVE ILAVP R R P Y KKED+G+VP YLGLV+ E+ EN M+EEFVR+ R + E+ ELV+ LKAKWD VNS+YQ+L H F+ G++ K E EL +E D+ L KG V +
Sbjct: 5 ECIFNLIPKVVMQPVKPERYRSKHDPKVEPTGSSFGVHGTTKLVGSNLGEVGRMEKPGSAKGFGRVPAKPDPKEFIKKGDRCSTTVDASKKPS--KFTYSGSA-----------------------------------KPTIVKRDEKPIMGLKSAKNFVTANAVETILAVPGTRARAKNEPPQYTKKEDYGKVPRYLGLVKDEIERENTMIEEFVRQNKNFIEEESGRAEP----MDERERIELVNALKAKWDHVNSKYQKLCHNVVFDTLGKVRRKETFEKELTQLEKDIQLLEKGHVVI 265
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: A0A8K1FHD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHD5_PYTOL) HSP 1 Score: 142 bits (358), Expect = 5.440e-37 Identity = 110/297 (37.04%), Postives = 148/297 (49.83%), Query Frame = 1
Query: 70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQRKAKGSMFGIKEGKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQIL-----PTRM------KPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRR---PPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEH-GRMAAKARLEGELDDIEADLSKLTKGPVAV 915
E IYN++P+V KP Y++ D S GS FG+ GK + N VG+ + RRAG + +G +KG ER + PT+ +P V +R+E P MGL S+KNFVT+NAVEAILAVP R R P Y+KKED+G+VP YL V+ E+ ENEM+EEFVR+ I E + + E+ LVD LKAKWD VN++YQ+L H F+ G++ K E EL +E D+ L+KG V V
Sbjct: 5 ECIYNLIPKVVVAPAKPERYRSKHDPSVNPT----------GSTFGL-HGKTRLIGSN---VGDDTKVDRRAGAKT--------------IGRSSDKPDPKGFTKKG----ERCSTTVDPAKKPTKFDYDGPKRPSVVKRDEKPIMGLKSSKNFVTANAVEAILAVPGTRARVTREPPQYVKKEDYGQVPKYLNQVKDEIERENEMIEEFVRQNKNIMEEDEGGRAEPM---DERERKHLVDALKAKWDHVNAKYQKLCHNVVFDTLGKVRRKETFEKELTQLEKDIELLSKGQVVV 266
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: A0A7S2FLR5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLR5_9STRA) HSP 1 Score: 141 bits (356), Expect = 7.130e-37 Identity = 101/287 (35.19%), Postives = 144/287 (50.17%), Query Frame = 1
Query: 70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQR---KAKGSMFGIKEGKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEH-GRMAAKARLEGELDDIEADLSKLTK-GPVAV 915
ESIYN++P E KPPMY++ D S + STF + G+ K G + P N +R G ELP + F + KP VP+ E+ P MG+ +AKNF+T+NAVEAIL VP DYL K D+G+VP+YLG V+ E+R EN+M++ +V E MG + A L+ + + E++ELV LK KWD VN++YQ++ H + G++ K +E EL IEAD+ +L + GPV V
Sbjct: 4 ESIYNLVPEQYVEQPKPPMYRSQHDPSAPVTGSTFGTHGTTQLHGAGIVKKRGAATFGPSNKTNPNPQTYLKR--GAPLELPAPTAF-------------------------------KYRDASRKPSVPKVEDRPVMGIQTAKNFITANAVEAILQVPQGLGETEPDYLAKADYGKVPEYLGQVKEEIRRENDMIDAYVME-MGRAQGAVEEPGEELIEMSAAERSELVRALKRKWDAVNAKYQKMAHTVKLDTVGKVKRKEGMEKELVQIEADIERLERPGPVYV 256
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: F0YFA4_AURAN (Enkurin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFA4_AURAN) HSP 1 Score: 138 bits (347), Expect = 8.030e-37 Identity = 74/156 (47.44%), Postives = 107/156 (68.59%), Query Frame = 1
Query: 436 KPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEH-GRMAAKARLEGELDDIEADLSKLTK 900
K VPRR E P MGL ++KNF+T+NAVEAIL VPT + DYLKK D+ +VP YLG V+ E+R ENEM++ +V+EQMG++T E +++ + L L +E++ L+ LK KWD VN++YQ++ H + G++ K +E EL +EAD+ KL K
Sbjct: 1 KSAVPRRTEKPVMGLKTSKNFITANAVEAILQVPTVKYTAEPDYLKKADYAQVPAYLGQVKEEIRRENEMIDAYVKEQMGLNT--EEKEDLSEL-LADDERSRLISALKRKWDAVNAKYQKMTHNVNLDTVGKVKRKESMEKELKQLEADIGKLEK 153
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: A0A662XIL3_9STRA (Enkurin domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XIL3_9STRA) HSP 1 Score: 142 bits (357), Expect = 8.450e-37 Identity = 106/302 (35.10%), Postives = 145/302 (48.01%), Query Frame = 1
Query: 70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQR---KAKGSMFGIKE--GKRSM-----------EPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRR---PPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEH-GRMAAKARLEGELDDIEADLSKLTKGPVAV 915
E IYN++PR + + +KP Y++ FD + STF R K +G+ G E K S +P++F+R GE + KR P +G KP V R++E P MGL SAKNFVT+NAVE+ILAVP +R R P Y+ K+D+G+VP YL V+ E+ EN M+EEFVR+ + E + E+ LVD LKAKWD VN +YQ+L H F+ G++ K E EL +E D+ L KG V V
Sbjct: 5 ECIYNLIPRPEVQPVKPERYRSKFDPHVQPTGSTFGVRGKTKLEGANLGAPERLAKPSSARGFGRVLTKPDPKSFIRKGERSATAVVSAKRTREPSSKFTYAGQA---------------------------------KPAVVRKDEKPIMGLKSAKNFVTANAVESILAVPGHRARVVTEPPQYVSKQDYGQVPRYLSQVKDEIARENSMIEEFVRQNRNL---LEEDGRGRAEPMDERERLALVDSLKAKWDHVNGKYQKLCHNVVFDTLGKVRRKETFEKELTQLERDIQLLEKGHVVV 270
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: D8LGE6_ECTSI (Enkurin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE6_ECTSI) HSP 1 Score: 141 bits (356), Expect = 1.050e-36 Identity = 102/287 (35.54%), Postives = 150/287 (52.26%), Query Frame = 1
Query: 70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQRKAKGSMFGIKE--GKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFE-HGRMAAKARLEGELDDIEADLSKLTKGPVAVVP 921
E+IY+++P V + +KPPMYK+ D + STF FG + G ++ + G +EA R + L K + +G+G G + KG A P K VPRR++ P G+ S NFVT+NAV+ ILAVP P++YL+KED+G+VP YL V++E+ EN M++ FVREQMG+ + L L E+ EL+ LKAKWD VN +YQ + H + G++ K ++E +L +E D+ KL K PV + P
Sbjct: 3 ETIYSLVPHVPDVPVKPPMYKSRHDPVCVLAGSTF-------GAFGTTQPIGAAVLKKQASGTFGPPVEALRNDPAK-FLKKGTKTQTGTGASGDKDSGGDAKSSK-KGPAPAF----TYPGERKAMVPRRDDCPVTGIVSKANFVTANAVDTILAVPRRVDLEPVNYLEKEDYGKVPKYLQQVKSEITRENAMIDMFVREQMGLEV---GDDDDHLEELRERERTELLHALKAKWDTVNKKYQLMAHMVNLDTFGKLRRKEQMETQLKGLEKDIEKLEKTPVLIRP 273 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig7.14465.1 >prot_C-linearis_contig7.14465.1 ID=prot_C-linearis_contig7.14465.1|Name=mRNA_C-linearis_contig7.14465.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=212bp MLPRVKEETLKPPMYKATFDHSRKIQCSTFDQRKAKGSMFGIKEGKRSMEback to top mRNA from alignment at C-linearis_contig7:2273511..2277203+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig7.14465.1 ID=mRNA_C-linearis_contig7.14465.1|Name=mRNA_C-linearis_contig7.14465.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3693bp|location=Sequence derived from alignment at C-linearis_contig7:2273511..2277203+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig7:2273511..2277203+ >mRNA_C-linearis_contig7.14465.1 ID=mRNA_C-linearis_contig7.14465.1|Name=mRNA_C-linearis_contig7.14465.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1272bp|location=Sequence derived from alignment at C-linearis_contig7:2273511..2277203+ (Chordaria linearis ClinC8C monoicous)back to top |