mRNA_C-linearis_contig112.1553.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig112.1553.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE) HSP 1 Score: 414 bits (1064), Expect = 2.220e-129 Identity = 199/301 (66.11%), Postives = 246/301 (81.73%), Query Frame = 3
Query: 1065 GGLYGATLSDHNKLLQIKLVKGCLSAGIPLNALNNPLMKDFFDHVDATLPHSTHLGKHVPFLLTEENAKTMTELGDGNYAVCFDATPYRCECFGIGIRFINQSDGKVVQRVLKLSMLKKSMSARDIVGEIQLVLIEEFGLGLSRCLGFSLDSCAANQLALVSLTEHIFLRSVGILCFSHMFNNVGKQMKFPEVDKFMGKVHTLLSHSPYAKALFLESTGVRPPSTPNHRWGSRFERDHTMAMHWPGVEAFLFAYQTDDEDKGKTIKWLQEQLGLVRPDGKRQRLVLQMQLAVLVDIGKLVT 1967
GG+YG TLSD +KLLQ+KLV GCLSAGIPL+AL +P MK FFD + P +HL +HVPFLL +E T++ELG+GNY VCFDATPYRCECFGIG+RFINQ+ G+VVQRVLK++MLKKSMSARDIVG++ L EEF L SRC+GF LD CAAN LAL SLT+HI+ +SVGI CFSH+FNN+G +++FP+VD+F+GK+HTLLSHSP AKALF E GV P TPNHRWGSR+ERD+ +AM+WPGV F+ AY+++D++K KT WL+ +L R DGK Q LVL+MQLAVLVD+GK+VT
Sbjct: 6 GGMYGDTLSDRDKLLQVKLVAGCLSAGIPLHALEDPQMKAFFDFANIRAPGRSHLAEHVPFLLRKELDTTLSELGNGNYTVCFDATPYRCECFGIGLRFINQN-GQVVQRVLKIAMLKKSMSARDIVGQVNDTLGEEFNLRASRCIGFMLDGCAANLLALDSLTQHIYRKSVGIPCFSHLFNNIGTRLRFPDVDEFLGKLHTLLSHSPQAKALFREIVGVTDPPTPNHRWGSRYERDYLIAMNWPGVVKFIEAYKSNDDEKSKTATWLRSELARKRNDGKDQVLVLRMQLAVLVDVGKIVT 305
BLAST of mRNA_C-linearis_contig112.1553.1 vs. uniprot
Match: A0A6H5JD81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD81_9PHAE) HSP 1 Score: 414 bits (1063), Expect = 1.380e-127 Identity = 231/485 (47.63%), Postives = 304/485 (62.68%), Query Frame = 3
Query: 534 FFELSDASKAKASKARDKRQXXXXXXXXXXXXSMADNPEPPAKDAVISRPRATVSNEQRRLNRGAKTAASKKGFKPRGARAIQPSKTAVKTFKYKKVSRVSVFDRMKQNPGQSLFRTTGGQLACNACNGKIIQ-HDKKLGVQSHCKSETHIRNMQKSSTSQEEDK------GTLRAFCAASDEGGGLYGATLSDHNKLLQIKLVKGCLSAGIPLNALNNPLMKDFFDHVDATLPHSTHLGKHVPFLLTEENAKTMTELGDGNYAVCFDATPYRCECFGIGIRFINQSDGKVVQRVLKLSMLKKSMSARDIVGEIQLVLIEEFGLGLSRCLGFSLDSCAANQLALVSLTEHIFLRSVGILCFSHMFNNVGKQMKFPEVDKFMGKVHTLLSHSPYAKALFLESTGVRPPSTPNHRWGSRFERDHTMAMHWPGVEAFLFAYQTDDEDKGKTIKWLQEQLGLVRPDGKRQRLVLQMQLAVLVDIGKLVT 1967
F E +DASK +A +KR ++A+NP P ++ I R RA VS QRR + + RGA A + K K ++V V DR+K+ P Q+ + G++ C AC GK + H + V+ H K + H + + + EEDK GTLRAF S+E GG YG TLSD +KL QIK VKGCL+A IPLNAL NP+ F H + LPHS HL KH+P +L EE AK E+GD YA+CFDATPY CECFG+G+RFI S G+V QRVL+LSMLKKSM+A DI GE+ ++ E+GL +C DSCAAN LA+ +L + +F ++ I C SH FNN+GKQ+ ++D F+GK+HTLLSHS AKALF E GVR PSTP HRWGSRF+RD+ +AM+WPGV F+ AY++ D DK K K+++++L VR D K Q L LQMQLA++VD+G+ VT
Sbjct: 4 FQEAADASKKRARTNSEKRAADKRAKRVE---AIANNPAAPEREEGIERDRAVVSLAQRRRAHANVAEGAGRNIDSRGAMATRTPK---------KDAQVPVHDRIKEFPNQTFYMINTGKMGCRACFGKEVSLHSYR--VKDHIKGKKHQKRVAIMLATDEEDKVSLLVVGTLRAFAKRSEEDGGSYGDTLSDKDKLTQIKAVKGCLAAAIPLNALGNPVFGAFLAHFNVNLPHSGHLAKHIPLILEEEQAKVRGEIGDRPYALCFDATPYLCECFGVGVRFIGSS-GQVAQRVLRLSMLKKSMTASDIAGEVNRIVTHEYGLDPDKCRAIMGDSCAANLLAMDALAK-LFRYAIVIGCLSHTFNNIGKQLSSLDLDAFLGKMHTLLSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYVIAMNWPGVLEFIAAYESGDTDKSKAAKFMRDELVRVRDDNKTQSLHLQMQLALMVDVGRSVT 472
BLAST of mRNA_C-linearis_contig112.1553.1 vs. uniprot
Match: A0A6H5KTX0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTX0_9PHAE) HSP 1 Score: 407 bits (1047), Expect = 2.830e-124 Identity = 220/450 (48.89%), Postives = 290/450 (64.44%), Query Frame = 3
Query: 630 SMADNPEPPAKDAVISRPRATVSNEQRRLNRGAKTAASKKGFKPRGARAIQPSKTAVKTFKYKKVSRVSVFDRMKQNPGQSLFRTTGGQLACNACNGKIIQ-HDKKLGVQSHCKSETHIRNMQKSSTSQEEDK------GTLRAFCAASDEGGGLYGATLSDHNKLLQIKLVKGCLSAGIPLNALNNPLMKDFFDHVDATLPHSTHLGKHVPFLLTEENAKTMTELGDGNYAVCFDATPYRCECFGIGIRFINQSDGKVVQRVLKLSMLKKSMSARDIVGEIQLVLIEEFGLGLSRCLGFSLDSCAANQLALVSLTEHIFLRSVGILCFSHMFNNVGKQMKFPEVDKFMGKVHTLLSHSPYAKALFLESTGVRPPSTPNHRWGSRFERDHTMAMHWPGVEAFLFAYQTDDEDKGKTIKWLQEQLGLVRPDGKRQRLVLQMQLAVLVDIGK 1958
++A+NP P ++ I R RA VS QRR + + RGA A + K K ++V V DR+K+ P Q+ + G++ C AC GK + H + V+ H K + H + + + EEDK GTLRAF S+E GG YG TLSD +KL QIK VKGCL+A IPLNAL NP+ F H + LPHS HL KH+P +L EE AK E+GD YA+CFDATPY CECFG+G+RFI S G+V QRVL+LSMLKKSM+A DI GE+ ++ E+GL +C DSCAAN LA+ +L + +F ++ I C SH FNN+GKQ+ ++D F+GK+HTLLSHS AKALF E GVR PSTP HRWGSRF+RD+ +AM+WPGV F+ AY++ D DK K K+++++L VR D K Q L LQMQLA++VD+G+
Sbjct: 130 AIANNPAAPEREEGIERDRAVVSLAQRRRAHANVAEGAGRNIDSRGAMATRTPK---------KDAQVPVHDRIKEFPNQTFYMINTGKMGCRACFGKEVSLHSYR--VKDHIKGKKHQKRVAIMLATDEEDKVSLLVVGTLRAFAKRSEEDGGSYGDTLSDKDKLTQIKAVKGCLAAAIPLNALGNPVFGAFLAHFNVNLPHSGHLAKHIPLILEEEQAKVRGEIGDRPYALCFDATPYLCECFGVGVRFIGSS-GQVAQRVLRLSMLKKSMTASDIAGEVNRIVTHEYGLDPDKCRAIMGDSCAANLLAMDALAK-LFRYAIVIGCLSHTFNNIGKQLSSLDLDAFLGKMHTLLSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYVIAMNWPGVLEFIAAYESGDTDKSKAAKFMRDELVRVRDDNKTQSLHLQMQLALMVDVGR 566
BLAST of mRNA_C-linearis_contig112.1553.1 vs. uniprot
Match: A0A6H5JN03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN03_9PHAE) HSP 1 Score: 382 bits (981), Expect = 6.200e-119 Identity = 186/300 (62.00%), Postives = 231/300 (77.00%), Query Frame = 3
Query: 1068 GLYGATLSDHNKLLQIKLVKGCLSAGIPLNALNNPLMKDFFDHVDATLPHSTHLGKHVPFLLTEENAKTMTELGDGNYAVCFDATPYRCECFGIGIRFINQSDGKVVQRVLKLSMLKKSMSARDIVGEIQLVLIEEFGLGLSRCLGFSLDSCAANQLALVSLTEHIFLRSVGILCFSHMFNNVGKQMKFPEVDKFMGKVHTLLSHSPYAKALFLESTGVRPPSTPNHRWGSRFERDHTMAMHWPGVEAFLFAYQTDDEDKGKTIKWLQEQLGLVRPDGKRQRLVLQMQLAVLVDIGKLVT 1967
G YG TLS+ +KLLQ+KL GCLSAGIPL+AL +P MK FFD + +P +HL KH+P LL E ++ELGDGNY VCFD TPYRCECFGI +RFI+Q G+VVQ VLK+ ML KSMSARDIVG++ L EEF L SRC+GF LD C AN LAL SLT+HI+ RS+G+ CFSH+FNN+GK++ FP+++ F+GK+HTLLSHSP AKAL E GV P TPNHRWGSRFERD+ +AM+ PGV F+ A++++DEDK +T WL+ +L R DGK Q LVL+MQLAVLVD+GK+VT
Sbjct: 7 GWYGDTLSNRDKLLQVKLATGCLSAGIPLHALGDPQMKVFFDFANICMPGDSHLAKHIPVLLRTELDTALSELGDGNYTVCFDPTPYRCECFGIELRFIDQK-GQVVQHVLKIEMLTKSMSARDIVGQVNDTLSEEFCLKASRCIGFMLDGCTANLLALDSLTQHIYRRSLGVSCFSHLFNNIGKRLIFPDLEDFLGKLHTLLSHSPQAKALLREIVGVADPPTPNHRWGSRFERDYLVAMNSPGVVKFIEAHKSNDEDKSRTAAWLRSELARKRDDGKYQVLVLRMQLAVLVDVGKIVT 305
BLAST of mRNA_C-linearis_contig112.1553.1 vs. uniprot
Match: A0A6H5KEG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG8_9PHAE) HSP 1 Score: 307 bits (786), Expect = 4.190e-88 Identity = 167/388 (43.04%), Postives = 237/388 (61.08%), Query Frame = 3
Query: 831 VSVFDRMKQNPGQSLFRTTGGQLACNACNGKIIQHDKKLGVQSHCKSETHIRNMQKSSTSQEEDKGTLRAFCAASDEGGGLYGATLSDHNKLLQIKLVKGCLSAGIPLNALNNPLMKDFFDHVDATLPHSTHLGKHVPFLLTEENAKTMTELGDGNYAVCFDATPYRCECFGIGIRFINQSDGKVVQRVLKLSMLKKSMSARDIVGEIQLVLIEEFGLGLSRCLGFSLDSCAANQLALVSLTEHIFLRSVGILCFSHMFNNVGKQMKFPEVDKFMGKVHTLLSHSPYAKALFLESTG-VRPPSTPNHRWGSRFERDHTMAMHWPGVEAFLFAYQTDDEDKGKTIKWLQEQLGLVRPDGKRQRLVLQMQLAVLVDIGKLVTHRHHLPGG 1991
V +R+K PGQ L GG L C AC K +Q KK V++HC S+ H ++ + Q + + +L F S+ GG YG +L + Q+ V+ CLS+G+ LNAL+ PL K+FF HV A L + HL H+PF+L +E K + ELGD Y++ F+ TPYR CFG+GIRFI ++ GK+ QRVL LSML KSM I GE+ V+++++ L +C+GF LD C+AN AL +L + F + G+ CFSH+ N G +M + DKF G +HTLLSHS AK L+L+ TG V PP P+HRW SRFER+ + +W +++F+ + + DE K K+ +++ L VRPD Q LVLQ++ AV D+G +T HL G
Sbjct: 192 VGAHERVKDFPGQRL-EVLGGGLYCQACK-KSLQI-KKSTVKNHCLSKEHTLAVKDFARKQADIQTSLDMFQEHSELAGGSYGNSLHPKELMTQLMAVEACLSSGVALNALDQPLKKEFFRHVGARLQTARHLANHIPFILNKEKKKILDELGDSRYSITFNETPYRAACFGVGIRFITKA-GKITQRVLSLSMLSKSMDFAAINGEVMKVVVDDYRLDRQKCVGFMLDGCSANLKALDTLKMN-FRIATGVRCFSHLCKNSGNEMNSDDTDKFAGHLHTLLSHSHNAKDLWLQETGGVAPPKPPSHRWSSRFERNDCLVRNWQQMKSFVNKFTSADESKSKSAAAMRDTLAHVRPDNIHQELVLQLEFAVAADVGIHLTRATHLLEG 574
BLAST of mRNA_C-linearis_contig112.1553.1 vs. uniprot
Match: A0A6H5K4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R7_9PHAE) HSP 1 Score: 306 bits (785), Expect = 1.120e-87 Identity = 187/466 (40.13%), Postives = 260/466 (55.79%), Query Frame = 3
Query: 573 KARDKRQXXXXXXXXXXXXSMADNPEPPAKDAVISRPRATVSNEQRRLNRGAKTAASKKGFKPRGARAIQPSKTAVKTFKYKKVSRVSVFDRMKQNPGQSLFRTTGGQLACNACNGKIIQ-HDKKLGVQSHCKSETHIRNMQKSSTSQEEDKGTLRAFCAASDEGGGLYGATLSDHNKLLQIKLVKGCLSAGIPLNALNNPLMKDFFDHVDATLPHSTHLGKHVPFLLTEENAKTMTELGDGNYAVCFDATPYRCECFGIGIRFINQSDGKVVQRVLKLSMLKKSMSARDIVGEIQLVLIEEFGLGLSRCLGFSLDSCAANQLALVSLTEHIFLRSVGILCFSHMFNNVGKQMKFPEVDKFMGKVHTLLSHSPYAKALFLESTGVRPPSTPNHRWGSRFERDHTMAMHWPGVEAFLFAYQTDDEDKGKTIKWLQEQLGLVRPDGKRQRLVLQMQLAVLVDIGKLVT 1967
KAR+ + +A+NP P ++ I R RA VS +RR R A+ K F RGA A + K K ++V V+DR+K+ P Q+ + G+LAC AC GKII H + V+ H + H + + ++E+DKGTLRAF S+ ++ +KL QIK VKG L+AG+PLNAL NP+ F H+D LP + HL +H+P +L EE A QRVL+LSMLKKSM+A DI GE+ ++ E+ L ++C DS AAN LA+ +L + + ++ I C SH FNN+GKQ+ E+D F+GK+HTLLSHS +KALF E GVR PSTP HRWGSRF+RD+ +AM+WPGV F+ AY+ D DK K K+++++L R D Q L LQ+QLA++VD+G+ VT
Sbjct: 171 KARENSEKRSADKRAKRVEEIANNPAAPEREESIERDRAVVSLAKRRGVRAKAANAAGKRFASRGAMAKRTPK---------KDAQVPVYDRIKEFPNQTFYMADAGKLACRACFGKIIALHSYR--VKDHIDGKKHQKRVAMMLDTEEDDKGTLRAFTKRSE----------AEKDKLTQIKAVKGYLAAGVPLNALGNPVFGAFLAHLDVDLPSAGHLAEHIPLILEEEAA----------------------------------------QRVLRLSMLKKSMTADDIAGEVNRIVTHEYSLDPNKCQAIIGDSGAANLLAMDALAK-LSRYAIVIGCLSHTFNNIGKQLSTQELDTFLGKMHTLLSHSAGSKALFKEKVGVRAPSTPGHRWGSRFDRDYIIAMNWPGVLEFIAAYENGDTDKSKAAKFMRDELVQFRDDKNPQSLFLQLQLALMVDVGRSVT 574
BLAST of mRNA_C-linearis_contig112.1553.1 vs. uniprot
Match: A0A6H5KX52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX52_9PHAE) HSP 1 Score: 299 bits (765), Expect = 2.330e-85 Identity = 150/277 (54.15%), Postives = 195/277 (70.40%), Query Frame = 3
Query: 1137 SAGIPLNALNNPLMKDFFDHVDATLPHSTHLGKHVPFLLTEENAKTMTELGDGNYAVCFDATPYRCECFGIGIRFINQSDGKVVQRVLKLSMLKKSMSARDIVGEIQLVLIEEFGLGLSRCLGFSLDSCAANQLALVSLTEHIFLRSVGILCFSHMFNNVGKQMKFPEVDKFMGKVHTLLSHSPYAKALFLESTGVRPPSTPNHRWGSRFERDHTMAMHWPGVEAFLFAYQTDDEDKGKTIKWLQEQLGLVRPDGKRQRLVLQMQLAVLVDIGKLVT 1967
S +PLNAL NP+ + F HV+ LP S HL +H+P +L EE AK E+GD A+CFDATPY CE F +G+RFIN S G+V QRVL+LSMLKKSM+A DI GE+ ++ E+GL +C DSCAAN LA+ +L + +F +V I C FNN+ KQ+ PE+D F+GK+HTLLSHS AKALF E GVR PSTP HRWGSRF+RD+ +AM+WPGV F+ AY++ D DK K K+++++L VR D K Q LVLQ+ LA++VD+G VT
Sbjct: 45 SCCVPLNALGNPVFEKFLAHVNVNLPSSGHLAEHIPLILEEEQAKIRDEMGDRPNALCFDATPYLCEWFRVGVRFINAS-GQVAQRVLRLSMLKKSMTADDIAGEVTRIVTHEYGLDPVKCRAIKRDSCAANLLAMDALAK-LFRYAVVISCLPPTFNNIAKQLCTPELDTFLGKMHTLLSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYIIAMNWPGVLKFIAAYESADTDKSKAAKFMRDELVRVRDDNKAQSLVLQLHLALMVDVGCSVT 319
BLAST of mRNA_C-linearis_contig112.1553.1 vs. uniprot
Match: A0A6H5JIR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR3_9PHAE) HSP 1 Score: 297 bits (761), Expect = 7.950e-84 Identity = 162/387 (41.86%), Postives = 225/387 (58.14%), Query Frame = 3
Query: 831 VSVFDRMKQNPGQSLFRTTGGQLACNACNGKIIQHDKKLGVQSHCKSETHIRNMQKSSTSQEEDKGTLRAFCAASDEGGGLYGATLSDHNKLLQIKLVKGCLSAGIPLNALNNPLMKDFFDHVDATLPHSTHLGKHVPFLLTEENAKTMTELGDGNYAVCFDATPYRCECFGIGIRFINQSDGKVVQRVLKLSMLKKSMSARDIVGEIQLVLIEEFGLGLSRCLGFSLDSCAANQLALVSLTEHIFLRSVGILCFSHMFNNVGKQMKFPEVDKFMGKVHTLLSHSPYAKALFLESTGVRPPSTPNHRWGSRFERDHTMAMHWPGVEAFLFAYQTDDEDKGKTIKWLQEQLGLVRPDGKRQRLVLQMQLAVLVDIGKLVTHRHHLPGG 1991
V+ DR+K+ P Q+L G+L C AC+ K + K V+ H H+ ++K S++ + ++ F S GG YG+TL+ QI KGCLSAG+PLNALNNP MKD LP + HL ++P +L EE LGDG Y VCFD TPYRCECFGIGIRFI DG++ QR+L LSML SM + I GE+ V+ E+ L RC GF LD C+ N ALV+LT H SVGI C SH+ N G QM+ ++DKF G + T+LSHS A + ++TG PP PNHRWGS +ER++ + +W ++ F+ + + DE + + + + +L G Q + LQ++ AV VD+GK +T+ +L G
Sbjct: 165 VTAVDRVKEFPNQTLI-AENGKLFCEACSRKPLAKIKST-VKKHVNGRKHMEAVKKHQKSKKLQQASMDVFREHSASVGGAYGSTLTPKEVTQQILFTKGCLSAGVPLNALNNPTMKDALHFAGVKLPSANHLANYIPVILKEE-------LGDGTYTVCFDGTPYRCECFGIGIRFIGP-DGQICQRLLGLSMLANSMDYKAIFGELNKVVFMEYKLRPERCRGFMLDGCSPNLKALVALTTHC-ANSVGIRCASHLLNLSGNQMESSQIDKFAGALQTVLSHSHNAADQWRKATGTTPPKAPNHRWGSAYERNNLLVTNWQQMKTFIDDFSSSDETRSRKADFCRRELARFGKHGYHQEVWLQIEFAVAVDLGKHLTNGTYLLEG 540
BLAST of mRNA_C-linearis_contig112.1553.1 vs. uniprot
Match: A0A6H5JJR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR7_9PHAE) HSP 1 Score: 297 bits (761), Expect = 6.610e-83 Identity = 187/507 (36.88%), Postives = 269/507 (53.06%), Query Frame = 3
Query: 549 DASKAKASKARDKRQXXXXXXXXXXXXSMADNPEPPAKDAVISRPRATVSNEQRRLNRGAKTAASKKGFKPRGARAIQ-PSKTAVKTFKYKKVSRVSVFDRMKQNPGQSLFRTTGGQLACNACNGKIIQ-HDKKLGVQSHCKSETHIRNMQKSSTSQEEDKGTLRAFCAASDEGGGLYGATLSDHNKLLQIKLVKGCLSAGIPLNALNNPLMKDFFDHVDATLPHSTHLGKHVPFLLTEENAKTMTELGDGNYAVCFDATPYRCECFGIGIRFINQSDGKVVQRVLKLSMLKKSMSARDIVGEIQLVLIEEFGLGLSRCLGFSLDSCAANQLALVSLTEHIFLRSVGILCFSHMFNNVGKQMKFPEVDKFMGKVHTLLSHSPYAKALFLESTGVRPPSTPNHRWGSRFERDHTMAMHWPGVEAFLFAYQTDDEDKGKTIKWLQEQLGLVRPDGKRQRLVLQMQLAVLVDIGKLVTHRHHLPGGGRAAVAQGVRHHLSISF*ARVGIA 2063
DA+ A KAR+ + +A+NP P ++ I R RA VS +RR R A+ + F RGA A + P+K A +V V+DR+K+ Q+ + G++AC AC GK+I H + V+ + H + + ++EEDKGTLRAF S+ + +KL QIK VKGCL+AG+PLN L N + F H+D LP + HL +H+P +L EE RV +L MLKKSM A DI GE+ ++ E+ L ++C DSCAAN LA+ +L + +F ++ I C SH FNN+GKQ+ PE+ F+GK+H LL HS AKALF E VR PSTP HRWGSRF+RD+ +AM+WPGV F+ AY++ D DK K K+++++L R D Q LVLQ+QLA++VD+G+ VT + G V +++ F +++ +A
Sbjct: 261 DATNASKRKARENSEKRSADKRAKRVEEIANNPAAPEREESIERDRAVVSLAKRRGARAKAANAAGRRFTSRGAMAKRTPTKDA----------QVPVYDRIKKFSDQTFYMADAGKMACRACFGKVISLHSYR--VKDRIDGKKHQKRVAMMLDTEEEDKGTLRAFTKRSE----------AQKDKLTQIKAVKGCLAAGVPLNVLGNRVFGAFLAHLDVDLPSAGHLAEHIPLILEEE-------------------------------------------RVRRLGMLKKSMMADDIAGEVNRIVTHEYSLDPNKCRAIIGDSCAANLLAMGALVK-LFRYAIVIGCLSHTFNNIGKQLSTPELGTFLGKMHALLLHSAGAKALFKEKVRVRAPSTPGHRWGSRFDRDYIIAMNWPGVLEFIAAYKSGDTDKSKAAKFMRDELVRFRDDKTPQSLVLQLQLALMVDVGRSVTSATIVLEGDEPLVRAHKTYNIVERFRSKLEVA 701
BLAST of mRNA_C-linearis_contig112.1553.1 vs. uniprot
Match: A0A6H5KSI8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI8_9PHAE) HSP 1 Score: 277 bits (708), Expect = 6.500e-79 Identity = 134/292 (45.89%), Postives = 193/292 (66.10%), Query Frame = 3
Query: 1122 VKGCLSAGIPLNALNNPLMKDFFDHVDATLPHSTHLGKHVPFLLTEENAKTMTELGDGNYAVCFDATPYRCECFGIGIRFINQSDGKVVQRVLKLSMLKKSMSARDIVGEIQLVLIEEFGLGLSRCLGFSLDSCAANQLALVSLTEHIFLRSVGILCFSHMFNNVGKQMKFPEVDKFMGKVHTLLSHSPYAKALFLESTGVRPPSTPNHRWGSRFERDHTMAMHWPGVEAFLFAYQTDDEDKGKTIKWLQEQLGLVRPDGKRQRLVLQMQLAVLVDIG-KLVTHRHHLPGGG 1994
V+ CLSAG+PLNAL N LMKDF H+ A LP + HL ++PF+ +E + + E+GD YA+ FD TPYR CFGIGIRF+N+ +G++ QRVL LSML KSM + I GE+ + ++E+ + S+C+GF LD C AN AL +L + F +VG+ CFSH+ NN G ++ E DKF G +H LL+HS A+ L+L+ T V PP +HRW SR+ R++ + ++W ++ F+ + + +E + K+ ++E+LG VRPDG Q L+LQ+ AV VD+G LV H L G G
Sbjct: 3 VEACLSAGVPLNALENSLMKDFLHHLGARLPGARHLANYIPFIEKKEKQRILDEVGDSRYAITFDETPYRAACFGIGIRFVNK-EGQITQRVLNLSMLSKSMDFKAIHGEVMKITVDEYKIDRSKCVGFMLDGCGANMKALDTLLLN-FPNAVGVRCFSHLLNNCGNELSSEETDKFAGHLHVLLAHSHNARDLWLQETKVSPPKPVSHRWSSRYVRNNALVLNWQQMKTFVDKFTSTEESRSKSAAAMREELGRVRPDGVHQELILQLGFAVTVDVGIHLVRATHLLEGDG 292 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig112.1553.1 >prot_C-linearis_contig112.1553.1 ID=prot_C-linearis_contig112.1553.1|Name=mRNA_C-linearis_contig112.1553.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=584bp MSMDMIPGVNGYGEDPPSPPRSRRQPPGTRWDGNSSDDGDVEMLPAPRPAback to top mRNA from alignment at C-linearis_contig112:484409..488641+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig112.1553.1 ID=mRNA_C-linearis_contig112.1553.1|Name=mRNA_C-linearis_contig112.1553.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4233bp|location=Sequence derived from alignment at C-linearis_contig112:484409..488641+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig112:484409..488641+ >mRNA_C-linearis_contig112.1553.1 ID=mRNA_C-linearis_contig112.1553.1|Name=mRNA_C-linearis_contig112.1553.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3504bp|location=Sequence derived from alignment at C-linearis_contig112:484409..488641+ (Chordaria linearis ClinC8C monoicous)back to top |