mRNA_C-linearis_contig112.1549.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig112.1549.1 vs. uniprot
Match: A0A6H5JCH2_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCH2_9PHAE) HSP 1 Score: 914 bits (2363), Expect = 0.000e+0 Identity = 462/595 (77.65%), Postives = 506/595 (85.04%), Query Frame = 3
Query: 333 PALDSPAGAALASEGLKPQEWKALLEAGELISLDEEQLLISQGDVYENPDDREVYLLLQGECRTEVKGKGVGQMGPGEFVGEASFVSGKPAPRTATVRAKGEDTRVVAWTWSGLRDFLGKPGNLRTKAALQACWMAGLAVRLNDVMAALGGQPVVDLEEEDKFKAGDYGYRYLEDMREVDSIVPVSAFTLAWWTFTREYRALRRTFRFGEFKDTGIAGPFSLIDRFLETSVFPVLRPSRVDLPREPGVVELQARLGELKLSNKAIEDRETARIAATKAFLEDEARKGVRDAGYILRSQTPWFVMVPYKVLCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLFETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFLVLTLGYLVSPFLAYNFSELIESHAVDTYTEFAEVNKELLRSLPPTPQALDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVFRAIREDEAEHVKTMFACERGKGSLTSPNSAAATPRWAQDAAPTPDNMSRATAANINRNKAVRAEKEG-----------NLRADVARKTPLEAFSKALDPLRDLAEAAARHD 2084
P LDSPAGA LA EG+ +EW ALL+ GE++SL +LLISQGD Y+ P DR++YLLL GEC+ EVKGK V + PG+FVGEASF SG+ PRTATVRAK ++ RV+AWTW L+ F+ P NLRTKAALQA WM GLA +LNDVM+ALGGQ VV+L EEDK +AGDYGYRYLED +EV+SIVP+SA TLAWWTFTREYRALRRTFRFGEFKDTGIAGPFSLIDRFLETSVFPVLRPSRVDLP++P VV+LQ RL ELKLSNKAIEDRETARIAATKAFLEDE+RKG+R AGYILRSQTPW+VM PYK LCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFL+ETLGWWSG AEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYF VL LGYLVSPFLAYNFSELIESHAVDTYTEFAE NKELL+SLPPTPQALDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVF IR+DE EHVKTMFACERG G+L SPN+AAATPRWA++ PT M + A N RN R + LR D+ARKTPLEAF+ A DPLR+LA+AA D
Sbjct: 99 PPLDSPAGAGLAKEGISEREWAALLKVGEVVSLKGSELLISQGDTYDEPGDRQLYLLLDGECQIEVKGKPVASIAPGDFVGEASFTSGRVQPRTATVRAKSDEIRVMAWTWRDLQAFMDNPKNLRTKAALQAIWMEGLAGKLNDVMSALGGQSVVELREEDKTQAGDYGYRYLEDTQEVESIVPISASTLAWWTFTREYRALRRTFRFGEFKDTGIAGPFSLIDRFLETSVFPVLRPSRVDLPQDPDVVDLQNRLKELKLSNKAIEDRETARIAATKAFLEDESRKGLRAAGYILRSQTPWYVMAPYKALCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLYETLGWWSGAAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFFVLILGYLVSPFLAYNFSELIESHAVDTYTEFAEANKELLQSLPPTPQALDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVFSCIRDDELEHVKTMFACERGTGTLPSPNAAAATPRWAEEVTPT---MPKTIAPNTRRNTVKRVGNDDAGGGGRGGDSDKLRTDIARKTPLEAFTAAFDPLRELAKAAEESD 690
BLAST of mRNA_C-linearis_contig112.1549.1 vs. uniprot
Match: A0A835YR99_9STRA (Alternative oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR99_9STRA) HSP 1 Score: 459 bits (1180), Expect = 2.300e-143 Identity = 270/558 (48.39%), Postives = 332/558 (59.50%), Query Frame = 3
Query: 357 AALASEGLKPQEWKALLEAGELISLDEEQLLISQGDVYENPDDRE-VYLLLQGECRTEVKGKGVGQMGPGEFVGEASFVSGKPAPRTATVRAKGEDTRVVAWTWSGLRDFLGKPGNLRTKAALQACWMAGLAVRLNDVMAALGGQPVVD-LEEEDKFKAGDYGYRYL-EDMREVD--SIVPVSAFTLAWWTFTREYRALRRTFRFGEFKDTGI------AGP----FSLIDRFLETSVFPVLRPSRVDLPREPGVVELQARLG-------------ELKLSNKAIEDRETARIAATKAFLEDEARKGVRDAGYILRSQTPWFVMVPYKVLCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLFETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFLVLTLGYLVSPFLAYNFSELIESHAVDTYTEFAEVNKELLRSLPPTPQA------------------LDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVFRAIREDEAEHVKTMFACERGKGSLTSPNSAAATPRW 1892
A+L G+ P+ W LL G QLL+ +G +R VYL+L+G EVKG+ + +GPG F GEASFVS + PRTAT+R V W + L L +P N K AL A W LA +L M L P + A YG+R + + E ++VP A LA F +Y A+RR FRFGE G+ A P F ++D L+ V P L+ RE + E +A+ G +L LSN+AI RE R+A +AF+ +AR G+ A I RS TPWFV+ YK+LCW LD VFE RPIQRFWFLE+VARMPYFSYLSML L+ETLGWWS G EVR+VHF+EE+NEM HL+IME+LGGD RWSDRFLARHAAI+Y+ L + +L SPFLAYNFS+LIESHAVDTY EF E NKELL+SLPP P+A + YY GGDMY+FDEFQ+ PAF+RRP I +LYDVF IR+DE EHVKTMFACER + SPN AA W
Sbjct: 13 ASLVQAGVTPECWLTLLSKGTKKIFQAGQLLLEEGTEKSLDQERRGVYLVLEGTVHLEVKGRKLTALGPGTFGGEASFVSKRKGPRTATLRVTSPQALAVRWDTADLEQLLAEPENAVLKMALYAYWTQELATKLTSAMRRLEAPPGAQGAPSQAMALARSYGFRRSPKALAEAPDHAVVPPPAIALALKNFAIQYAAVRRGFRFGEISSDGVRTRDPNANPLSKLFGVVDAQLDNLVLPKLK--IFSTAREVAIAEAEAQPGGREALEARRAALRQLTLSNEAIARREDERMARFEAFVRSQARAGLGIAADIQRSDTPWFVLAGYKLLCWMLDFVFEGRPIQRFWFLESVARMPYFSYLSMLHLYETLGWWSVGTEVRRVHFSEEWNEMNHLKIMEALGGDMRWSDRFLARHAAIVYYWALNILFLFSPFLAYNFSKLIESHAVDTYGEFVETNKELLQSLPPPPEAXXXXXXXXXXXXXXXXXAVAYYVGGDMYMFDEFQSGTPAFTRRPVINSLYDVFCNIRDDEREHVKTMFACEREGELVRSPNELAARAIW 568
BLAST of mRNA_C-linearis_contig112.1549.1 vs. uniprot
Match: A0A4D9CVG3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVG3_9STRA) HSP 1 Score: 375 bits (962), Expect = 3.260e-112 Identity = 222/503 (44.14%), Postives = 301/503 (59.84%), Query Frame = 3
Query: 486 REVYLLLQGECRTEVKGKGVGQMGPGEFVGEASFVSGKPAPRTATVRAKGEDTRVVAWTWSGLRDFLGKPGNLRT-KAALQACWMAGLAVRLNDVMAAL--GGQPVVDLEEEDKFKAGDYGYRYLEDMR------EVDSIVPVSAFTLAWWTFTREYRALRRTFRFGEFK----------------DTGIA------GPFSLIDRFLE-TSVFPVLRPSRVDLPREPGVVELQARLGELKLSNKAIEDRETARIAATKAFLEDEARKGVRDAGYILRSQTPWFVMVPYKVLCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLFETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFLVLTLGYLVSPFLAYNFSELIESHAVDTYTEFAEVNKELLRSLPPTPQALDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVFRAIREDEAEHVKTMFACERGKGSLTSPNSAAATPRWAQ 1898
RE++ LL G+ R +V+G+ V ++G GE A ++ A A + E + R+ L + RT + AL W+ L+ +L D M +P LE++++ GD+GYR + +P AF LA W REY+A+RR+ RF ++ D G G F+ +D+ LE +FP LRP + + R P +AI RE R +++ +GV A + +S+TPWFV++PY LC FLD V+E RP+ RFWFLETVARMPYFSY+SML L+ETLGWW+ G +VR+VHFAEE+NE+ HL+IMESLGGD RW DRFLARH+AI Y+ VL L +L+SP LAYNFSELIESHAVDTY++F + N++LLR LP ALDYY GD+Y+FDEFQT+RP +RRP I++LYDVF AIR+DE+EHVKT+ AC+ + SPN+AAA WA+
Sbjct: 115 RELFFLLDGQVRIQVRGQKVARLG-GET--GAHYLVWNQAKLLAFFEGRTEGGDEDGFF---RRNLLNQDEKRRTLRNALNEYWVQQLSKKLADTMDTYERSWRPTDALEDDERQFEGDFGYRNQSAFGVSGPADALSKAIPAGAFELARWNVGREYQAIRRSVRFEDYAKLPQNQKTLLQDRSSLDPGAVLRKVTLGIFATLDKTLEWLEIFPRLRPPKASINRSP----------------EAITRREEIRREIQMDLIDEAQAQGVSVAAKMKQSETPWFVLLPYYALCAFLDAVYEGRPLARFWFLETVARMPYFSYISMLHLYETLGWWTIGTDVRRVHFAEEWNELHHLQIMESLGGDARWLDRFLARHSAIAYYWVLNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAAWAE 595
BLAST of mRNA_C-linearis_contig112.1549.1 vs. uniprot
Match: A0A0G4F067_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F067_VITBC) HSP 1 Score: 364 bits (935), Expect = 4.160e-108 Identity = 221/481 (45.95%), Postives = 283/481 (58.84%), Query Frame = 3
Query: 561 GEFVGEASFVSGKPAPRTATVRAKGEDTRVVAWTWSGLRDFL-GKPGNLRTKAALQACWMAGLAVRLNDVM-AALGGQPVVDLEE-----------EDKFKAGDYGYRYLEDMREVDSIVPVSAFTLAWWTFTREYRALRRTFRFGEFKD-TGIA------GPFSLIDRFLET---------SVFPVLR--PSRVDLPREPGVVELQARLGELKLSNKAIEDRETARIAATKAFLEDEARK--GVRDAGYILRSQT-------PWFVMVPYKVLCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLFETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFLVLTLGYLVSPFLAYNFSELIESHAVDTYTEFAEVNKELLRSLPPTPQALDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVFRAIREDEAEHVKTMFACERGKGSLT-SPNSAAA 1880
GE G A S + + A + ++W L +FL G+P KAAL W A L + V AA GG ++ + E+ +A YGYR +D+ +D VP + +++ W F RE+ A+RR RFG+ +G A GPF+ I R L + F V R PS+V P + + L+ L L+L N A+ RE R+ K LE K D + T P + +PY LCW LDV++ +RPIQRFWFLETVARMPYF+Y+SML L+ETLGWW G EVRKVHFAEE+NEM HL IMESLGGD W DRFLARHAAI+Y+ VL L +L+SP AYNFSELIE HAVDTY +F NK++L+ LP A++YY GD+Y+FDEFQTSRPA SRRP+I NLYDVF IR+DE EHVKTM AC+R + ++ SPN+AAA
Sbjct: 168 GEDKGPADSSSNSGSSKPAARVFAQQPVTYISWEVDRLNEFLAGRPA---LKAALTNLWTAELIQKARAVPPAARGGALEIEAHDAWDADKDLQRLEEWREAAAYGYRDDKDLGPLDMAVPANGWSMGVWNFKREWLAIRRAIRFGDMAPASGWANAEAGDGPFAGIVRILRRWDLNLDDVLATFNVQRLTPSKVQNPTDENTIRLRQELSRLRLDNDAVWRREEERVEKMKFLLEKHKDKQSAPPDTDLAVDYDTIKTYFNSPLLLKIPYLFLCWLLDVLYNERPIQRFWFLETVARMPYFAYISMLHLYETLGWWRVGTEVRKVHFAEEWNEMHHLFIMESLGGDQAWLDRFLARHAAIVYYWVLILLFLISPTWAYNFSELIEWHAVDTYGQFVSQNKQILKRLPAPAVAMEYYKSGDLYMFDEFQTSRPAQSRRPQINNLYDVFTTIRDDELEHVKTMSACQRLEAAMVMSPNAAAA 645
BLAST of mRNA_C-linearis_contig112.1549.1 vs. uniprot
Match: A0A0G4EY52_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EY52_VITBC) HSP 1 Score: 353 bits (905), Expect = 4.160e-106 Identity = 197/393 (50.13%), Postives = 249/393 (63.36%), Query Frame = 3
Query: 798 DLEEEDKFKAGDYGYRY--LEDMREVDSIVPVSAFTLAWWTFTREYRALRRTFRFGEFK-DTGIA------GPFS-----------LIDRFLETSV-FPVLRPSRVDLPREPGVVELQARLGELKLSNKAIEDRETARIAATKAFLED----EARKGVRDAGYILRSQT-------PWFVMVPYKVLCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLFETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFLVLTLGYLVSPFLAYNFSELIESHAVDTYTEFAEVNKELLRSLPPTPQALDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVFRAIREDEAEHVKTMFACERGKGSLTSPNSAAA 1880
DL+ E+ KAG YGY Y ++DM ++ VP + + + W F RE+ A+RR R+G+ ++G A GPF+ I+ L TS P L PS+V P + + L+ L L L + + RE R+ K LE + K D G + QT P + VPY LCW LD ++ RPIQRFW LETVAR+PY SY+SML L+ETLGWW G EVR+VHFAEE+NEM HL IMESLGGD W DRFLARHAAI+Y+ V+ +L+SP AYNFSEL+E HA DTY EF E NK+ L+ LP AL+YY+GGD+YLFDEFQ+SRPA SRRP I NLYDVF IR+DE EHVKTM AC+R + ++ SPN+AAA
Sbjct: 75 DLQREESRKAGHYGYTYDDMKDMGPLEMAVPANGWRIGVWNFQREWLAIRRAIRYGDMAPESGWANAPGGDGPFAGLLNVLRQWDKNIEDVLATSFNVPRLTPSKVQHPTDEETIRLRQELSRLSLDDDGVIRREEERVEKMKFLLEKYKDMDTSKYPADTGLEIDLQTIQTYFNAPLLIKVPYLFLCWLLDRLYAGRPIQRFWTLETVARIPYMSYISMLHLYETLGWWRVGVEVRRVHFAEEWNEMHHLFIMESLGGDQAWFDRFLARHAAIVYYWVVIFLFLISPTWAYNFSELVEWHATDTYAEFVEQNKDRLKRLPAPAVALEYYNGGDLYLFDEFQSSRPAESRRPNIDNLYDVFVTIRDDELEHVKTMSACQRLESAMKSPNAAAA 467
BLAST of mRNA_C-linearis_contig112.1549.1 vs. uniprot
Match: A0A7S1KCS9_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1KCS9_9ALVE) HSP 1 Score: 339 bits (870), Expect = 1.140e-102 Identity = 186/351 (52.99%), Postives = 228/351 (64.96%), Query Frame = 3
Query: 909 WTFTREYRALRRTFRFGEFKD-TGIA------GPFSLIDRFLET---------SVFPVLR--PSRVDLPREPGVVELQARLGELKLSNKAIEDRETARIAATKAFLEDEARK--GVRDAGYILRSQT-------PWFVMVPYKVLCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLFETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFLVLTLGYLVSPFLAYNFSELIESHAVDTYTEFAEVNKELLRSLPPTPQALDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVFRAIREDEAEHVKTMFACERGKGSLTSPNSAAA 1880
W F RE+ A+RR RFG+ +G A GPF+ I R L + F V R PS+V P + + L+ L L+L N A+ RE R+ K LE K D + T P + +PY LCW LDV++ +RPIQRFWFLETVARMPYF+Y+SML L+ETLGWW G EVR+VHFAEE+NEM HL IMESLGGD W DRFLARHAAI+Y+ V+ +L+SP AYNFSEL+E HA DTY EF E NK+ L+ LP AL+YY+GGD+YLFDEFQ+SRPA SRRP I NLYDVF IR+DE EHVKTM AC+R + ++ SPN+AAA
Sbjct: 4 WNFKREWLAIRRAIRFGDMAPASGWANAEAGDGPFAGIVRILRRWDLNLDDVLATFNVQRLTPSKVQNPTDENTIRLRQELSRLRLDNDAVWRREEERVEKMKFLLEKHKDKQSAPPDTDLAVDYDTIKTYFNSPLLLKIPYLFLCWLLDVLYNERPIQRFWFLETVARMPYFAYISMLHLYETLGWWRVGVEVRRVHFAEEWNEMHHLFIMESLGGDQAWFDRFLARHAAIVYYWVVIFLFLISPTWAYNFSELVEWHATDTYAEFVEQNKDRLKRLPAPAVALEYYNGGDLYLFDEFQSSRPAESRRPNIDNLYDVFVTIRDDELEHVKTMSACQRLESAMKSPNAAAA 354
BLAST of mRNA_C-linearis_contig112.1549.1 vs. uniprot
Match: A0A7S3XP24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP24_HETAK) HSP 1 Score: 333 bits (853), Expect = 1.290e-99 Identity = 189/340 (55.59%), Postives = 232/340 (68.24%), Query Frame = 3
Query: 921 REYRALRRTFRFG-EFKDTGIAGP-FSLIDR-----------FLETSV--FPVLRPSRVDLP-REPGVVELQARLGELKLSNKAIEDRETARIAATKAFLEDEARKGVRDAGYILRSQTPWFVMVPYKVLCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLFETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFLVLTLGYLVSPFLAYNFSELIESHAVDTYTEFAEVNKELLRSLPPTPQALDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVFRAIREDEAEHVKTMFACERGKGSLTSPNSAAATPRW 1892
RE+ ALRR+FRF + +D AG FS I++ +LE + + L S+ ++P V L+A + +L L N AI RE R AA +A + A V A + S TPW ++ PY LCW LD +F+ RPIQRFWFLET+ARMPYFSYLSML L+ETLGWW+ G EVRKVHFAEE+NE++HL+IM+SLGGD W+DRF ARHAAI+Y+ +L L + VSP AYNFSELIE HAVD+Y +F E N+ELLR LPP A+DYY GDMYLFDEFQTSR SRRP+I NLYDVFR I EDE EHVKT+ AC+ +L SPN AAA W
Sbjct: 1 REFNALRRSFRFAKQVEDEKKAGGVFSEINKAILSQTIKNDIWLENNFDWYTKLAESKDQTAAQDPEVARLRAGINQLVLDNAAIWRREEDRRAALRARVL--AAPLVGQAQKLRLSTTPWLILAPYYFLCWVLDFIFDGRPIQRFWFLETIARMPYFSYLSMLHLYETLGWWTVGEEVRKVHFAEEWNELRHLKIMQSLGGDAAWADRFFARHAAILYYWLLNLMFSVSPRAAYNFSELIEFHAVDSYGQFLEENEELLRRLPPPKAAVDYYMSGDMYLFDEFQTSRAPRSRRPKINNLYDVFRNIMEDELEHVKTVTACQISD-NLGSPNLAAADGTW 337
BLAST of mRNA_C-linearis_contig112.1549.1 vs. uniprot
Match: A0A7S3XP26_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP26_HETAK) HSP 1 Score: 333 bits (853), Expect = 2.730e-99 Identity = 189/340 (55.59%), Postives = 232/340 (68.24%), Query Frame = 3
Query: 921 REYRALRRTFRFG-EFKDTGIAGP-FSLIDR-----------FLETSV--FPVLRPSRVDLP-REPGVVELQARLGELKLSNKAIEDRETARIAATKAFLEDEARKGVRDAGYILRSQTPWFVMVPYKVLCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLFETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFLVLTLGYLVSPFLAYNFSELIESHAVDTYTEFAEVNKELLRSLPPTPQALDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVFRAIREDEAEHVKTMFACERGKGSLTSPNSAAATPRW 1892
RE+ ALRR+FRF + +D AG FS I++ +LE + + L S+ ++P V L+A + +L L N AI RE R AA +A + A V A + S TPW ++ PY LCW LD +F+ RPIQRFWFLET+ARMPYFSYLSML L+ETLGWW+ G EVRKVHFAEE+NE++HL+IM+SLGGD W+DRF ARHAAI+Y+ +L L + VSP AYNFSELIE HAVD+Y +F E N+ELLR LPP A+DYY GDMYLFDEFQTSR SRRP+I NLYDVFR I EDE EHVKT+ AC+ +L SPN AAA W
Sbjct: 1 REFNALRRSFRFAKQVEDEKKAGGVFSEINKAILSQTIKNDIWLENNFDWYTKLAESKDQTAAQDPEVARLRAGINQLVLDNAAIWRREEDRRAALRARVL--AAPLVGQAQKLRLSTTPWLILAPYYFLCWVLDFIFDGRPIQRFWFLETIARMPYFSYLSMLHLYETLGWWTVGEEVRKVHFAEEWNELRHLKIMQSLGGDAAWADRFFARHAAILYYWLLNLMFSVSPRAAYNFSELIEFHAVDSYGQFLEENEELLRRLPPPKAAVDYYMSGDMYLFDEFQTSRAPRSRRPKINNLYDVFRNIMEDELEHVKTVTACQISD-NLGSPNLAAADGTW 337
BLAST of mRNA_C-linearis_contig112.1549.1 vs. uniprot
Match: A0A2K1IAY0_PHYPA (Ubiquinol oxidase n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IAY0_PHYPA) HSP 1 Score: 333 bits (853), Expect = 9.030e-99 Identity = 181/363 (49.86%), Postives = 228/363 (62.81%), Query Frame = 3
Query: 834 YGYRYLEDMREVDSIVPVSAFTLAWWTFTREYRALRRTFRFGEFK---DTGIAGPFSLIDRFLETSVFPVLRPSRVDLPREPGVVELQ---------------ARLGELKLSNKAIEDRETARIAATKAFLEDEARKGVRDAGYILRSQTPWFVMVPYKVLCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLFETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFLVLTLGYLVSPFLAYNFSELIESHAVDTYTEFAEVNKELLRSLPPTPQALDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVFRAIREDEAEHVKTMFACERGKGSLTSPN 1868
+ Y + VP + LA+ F RE+R+LRRT F E K + + GP ++ + +F LR L G++EL+ A L +L LSN+A+ DRE AR + PW+++ PY +LC LDV+F DRPIQRFWFLETVARMPYFSY+SML L+ETLGWW GAEVRKVHFAEE+NEM HLRIMESLGGD W DRF A+HAA Y+ VL L +L+SP +AYNFSELIE HAVDTY EFA+ N+ELL++LPP P AL+YY D+Y++DEFQTS+ +RRP+I NLYDVF+AI DE EHVKTM AC+ + SP+
Sbjct: 130 FNYGFQAKFLRTGPSVPGNVVKLAFENFGREWRSLRRTILFTELKRIDPSKLNGPLEIVTAYTGRGLFLFLRGLDKFLTLYDGLMELKPLETNGENLEQDELRAALKKLTLSNQAVWDRENARPPV----------------------EAPWWILGPYYLLCLMLDVIFNDRPIQRFWFLETVARMPYFSYISMLHLYETLGWWRIGAEVRKVHFAEEWNEMHHLRIMESLGGDLEWGDRFFAQHAAFFYYWVLNLMFLISPKVAYNFSELIEMHAVDTYGEFADANEELLKTLPPPPAALEYYESEDLYMYDEFQTSQAPETRRPKINNLYDVFKAISGDELEHVKTMSACQTLDMPIKSPH 470
BLAST of mRNA_C-linearis_contig112.1549.1 vs. uniprot
Match: A0A150GUT6_GONPE (Ubiquinol oxidase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GUT6_GONPE) HSP 1 Score: 323 bits (827), Expect = 1.020e-96 Identity = 179/357 (50.14%), Postives = 225/357 (63.03%), Query Frame = 3
Query: 861 REVDSIVPVSAFTLAWWTFTREYRALRRTFRFGEFKDTGIAGP-------------------FSLIDRFLETS-VFPVLRPSRVDLPREPGVV----------ELQARLGELKLSNKAIEDRETARIAATKAFLEDEARKGVRDAGYILRSQTPWFVMVPYKVLCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLFETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFLVLTLGYLVSPFLAYNFSELIESHAVDTYTEFAEVNKELLRSLPPTPQALDYYHGGDMYLFDEFQTSRPAFS-RRPRIKNLYDVFRAIREDEAEHVKTMFACE 1838
+EVD +P +AF LAW F E RALR +FRF E+ A P F +DR LE V LRP + + EP E++ +L +LKLSNKA+ DRE AR ++A KGV+ TPWF+ Y LC+ LD +F++RP+QRFWFLETVARMPYFSY++ML L+E+ GWW GAE+RK+HFAEE+NE+ HL+IMESLGGD W DRF A HAA++Y+ +L Y+ SP LAYNFSELIE HAVDTY EF + N+ELL+SLPP A YY D+Y+FD FQTS+ + RRP K+LYDVFR I +DE EHVKTM AC+
Sbjct: 4 KEVDGRIPHNAFQLAWSNFQEELRALRESFRFDEYSSIAEANPARSALGRAVYGVGQVVVDGFGALDRALEKGQVLEPLRPRPMTVSVEPEDAQGAQLINECQEIRVKLKQLKLSNKAVWDREHAR---------EKAGKGVK---------TPWFIKGVYLSLCYLLDFLFDNRPVQRFWFLETVARMPYFSYITMLHLYESFGWWRAGAELRKIHFAEEWNELHHLQIMESLGGDQLWFDRFAALHAAVVYYWILVALYVFSPELAYNFSELIEYHAVDTYGEFVDANEELLKSLPPPLVAAVYYRSPDLYMFDSFQTSQSVSNPRRPTCKSLYDVFRNICDDELEHVKTMRACQ 342 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig112.1549.1 >prot_C-linearis_contig112.1549.1 ID=prot_C-linearis_contig112.1549.1|Name=mRNA_C-linearis_contig112.1549.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=720bp MIVGLAFVAAFAAPELVAAARHQQPASFPTGGLRRNCNRYYLCWAGPFAPback to top mRNA from alignment at C-linearis_contig112:410128..419260+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig112.1549.1 ID=mRNA_C-linearis_contig112.1549.1|Name=mRNA_C-linearis_contig112.1549.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9133bp|location=Sequence derived from alignment at C-linearis_contig112:410128..419260+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig112:410128..419260+ >mRNA_C-linearis_contig112.1549.1 ID=mRNA_C-linearis_contig112.1549.1|Name=mRNA_C-linearis_contig112.1549.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4320bp|location=Sequence derived from alignment at C-linearis_contig112:410128..419260+ (Chordaria linearis ClinC8C monoicous)back to top |