mRNA_C-linearis_contig112.1524.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig112.1524.1 vs. uniprot
Match: Q8QN79_ESV1K (EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K) HSP 1 Score: 555 bits (1430), Expect = 6.580e-193 Identity = 299/493 (60.65%), Postives = 360/493 (73.02%), Query Frame = 1
Query: 1 MENLIVDASTGHVGVVSMMTTARPALNPKGVLRSVKGILQDYSGPNISKRQVEGRITSVVPSEVCEYILDNISGQGWDTWRVASGDVFKQSLRNHVERVCSSLQAQSQHQQVQQMPSNQIEQDETKASLLTKALRTVNIDGSVRIDEDSGIASIIDAIRLLCPEASPENAAHMLTRVLEKENADGGNNHVPVVQSPIPIPIADRVSYIKINGHGNITPTCDAKTLIEIIWLLPAQAAKEVRRQSAETICRVLGGDVSLCDEIEQRCASLKSIEEGRTYQNFVMDQGPAKKHRSEPPFWFEYASDEQKSAFVS-------VVAKKAIALEEIDMHETCKQKLESLGHFAPRDKIEFADRIKDIQRRASRA---IAAAP-VDNSTISV--ARPVDDSIDPATGLLIATPKCSESVRGPETSICNEAGKMGIKVGEKAGQVGKKVKHLYSERYGVEAGRNIPKRDTTFRGKPFPENSYWARDADLIQKAIRIVCVP 1440
+ N+++DAS+G V V SM+ P L+ G+L++V +L DY+GP +S R + GR+ E+C ILD ++G W WR SG+ FK++LR VE V SS Q + Q Q K ++L ALR++NI+GSVRID+ G ASIID RL+CP AS AA M TRVLEKE DGGN+ + Q P PI ADRV YI+INGHGN+TP DAKT++EIIWLLP+ AAKE RRQSAETICRVLGGD+SLC EIEQRCA L+S EEGR YQ+FV DQGPAKK R+ P WFEYA+ E+K A++S V+AKKA+ L EID+ +TCK++L+S+G F RD+IEFADRIKD+QRRA+R I AAP VD S +SV A PVDD+IDP TGLL ATPKCS SVRGPETSIC EAGKMGI VGEKAGQVGK VK LYSERYG EAGRNIPKR TTFRGKPF EN+Y+ARD+DLIQ+ IRIVC P
Sbjct: 5 INNIVIDASSGDVAVKSMIKNIMPNLSESGILKTVHRVLGDYNGPKMSTRLMNGRLACAATLELCFDILDKMTGPPWRKWREESGNAFKKALRERVESVRSSSQTE-QLXXXXXXXXXXPTQVGIKTAVLQNALRSININGSVRIDDGLGKASIIDTTRLVCPGASSAYAAQMFTRVLEKERDDGGNSFMQDAQHPTPI--ADRVDYIRINGHGNVTPVSDAKTIVEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLRSTEEGRAYQSFVTDQGPAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLGEIDVFKTCKEELKSVGQFDQRDEIEFADRIKDVQRRATRVDNMITAAPTVDTSPVSVCVAMPVDDTIDPETGLLTATPKCSPSVRGPETSICVEAGKMGISVGEKAGQVGKVVKRLYSERYGQEAGRNIPKRSTTFRGKPFSENTYYARDSDLIQRGIRIVCAP 494
BLAST of mRNA_C-linearis_contig112.1524.1 vs. uniprot
Match: D8LPL9_ECTSI (EsV-1-210 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL9_ECTSI) HSP 1 Score: 503 bits (1295), Expect = 2.820e-172 Identity = 272/488 (55.74%), Postives = 343/488 (70.29%), Query Frame = 1
Query: 1 MENLIVDASTGHVGVVSMMTTARPALNPKGVLRSVKGILQDYSGPNISKRQVEGRITSVVPSEVCEYILDNISGQGWDTWRVASGDVFKQSLRNHVERVCSSLQAQSQHQQVQQMPSNQIEQDETKASLLTKALRTVNIDGSVRIDEDSGIASIIDAIRLLCPEASPENAAHMLTRVLEKENADGGNNHVPVVQSPIPIPIADRVSYIKINGHGNITPTCDAKTLIEIIWLLPAQAAKEVRRQSAETICRVLGGDVSLCDEIEQRCASLKSIEEGRTYQNFVMDQGPAKKHRSEPPFWFEYASDEQKSAFVSVVAKKAIALEEIDMHETCKQKLESLGHFAPRDKIEFADRIKDIQRRASRA--IAAAP------VDNSTISVARPVDDSIDPATGLLIATPKCSESVRGPETSICNEAGKMGIKVGEKAGQVGKKVKHLYSERYGVEAGRNIPKRDTTFRGKPFPENSYWARDADLIQKAIRIVCVP 1440
M+++++DA+TG VGV +++ P L+ VL+ V L+ SG ++ + + GR T ++C ILD +SG W WR +SG FK +LR V V SS Q + H VQQ E E KA +L KALR +NI+GSVR+DE++G+ S ID I +LCP ASPE+AAHMLTRVLEKE A G NNH P V P+ + ADR+ IKING GN TP DA T IEIIWLLPA+AA+E R+QSA+TI RVLGGDVSLC EIEQRCA L++ E+GR YQ+ + Q P KKH+S P WFEYA+ +QKSA+V+ KK++ + E++MHE CK LES+G FA RD+IE+ADRI+D QRRASRA + AP V +S+ +A P D+SIDP TG LIAT K S SVRGPETSIC EA K+GI GE+AGQVGK K LY ++YG EA R+IP R TTFRGKPF E +Y++RDADLIQ+AIRIVC P
Sbjct: 24 MDSIMIDATTGVVGVKTLIWHIMPELHSSSVLKGVHRALEG-SGASMDRTLINGRFTKTATVDLCCDILDKMSGASWQQWRQSSGPAFKNALRERVASVVSSGQVEQAHPPVQQAE----EGVEKKAVVLRKALRAMNIEGSVRVDENTGMLSDIDVINMLCPGASPEDAAHMLTRVLEKEAAGGANNHGPTVHGPVAL--ADRIKRIKINGKGNPTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQNTEDGRAYQSVMTGQAPTKKHKSLPE-WFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPGDVGDSSTLIATPFDNSIDPETGKLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLYGQKYGEEANRDIPTRHTTFRGKPFVERTYFSRDADLIQQAIRIVCCP 503
BLAST of mRNA_C-linearis_contig112.1524.1 vs. uniprot
Match: Q8QN80_ESV1K (EsV-1-210 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN80_ESV1K) HSP 1 Score: 491 bits (1264), Expect = 1.390e-167 Identity = 263/488 (53.89%), Postives = 339/488 (69.47%), Query Frame = 1
Query: 1 MENLIVDASTGHVGVVSMMTTARPALNPKGVLRSVKGILQDYSGPNISKRQVEGRITSVVPSEVCEYILDNISGQGWDTWRVASGDVFKQSLRNHVERVCSSLQAQSQHQQVQQMPSNQIEQDETKASLLTKALRTVNIDGSVRIDEDSGIASIIDAIRLLCPEASPENAAHMLTRVLEKENADGGNNHVPVVQSPIPIPIADRVSYIKINGHGNITPTCDAKTLIEIIWLLPAQAAKEVRRQSAETICRVLGGDVSLCDEIEQRCASLKSIEEGRTYQNFVMDQGPAKKHRSEPPFWFEYASDEQKSAFVSVVAKKAIALEEIDMHETCKQKLESLGHFAPRDKIEFADRIKDIQRRASRA--IAAAP------VDNSTISVARPVDDSIDPATGLLIATPKCSESVRGPETSICNEAGKMGIKVGEKAGQVGKKVKHLYSERYGVEAGRNIPKRDTTFRGKPFPENSYWARDADLIQKAIRIVCVP 1440
M+++ +DA+TG VGV +++ P L+ VL+ V LQD SG ++ + GR+T +C ILDN+ G WD WR +SG FK +LR HV V SS Q + H VQQ +E ETKA +L K+LR +NI+GSVR+DE SG+ S ID I++LCPE + + A L R+LE++ + +N P+ADRV Y+KING G++TP DA T IEIIWLLPA+AA+E R+QSA+TI RVLGGDVSLC EIEQRCA L++ EEGR YQ+ + + P KKH+S P WFEYA+ +QKSA+V+ KK++ + EI+MHE CK LES+G FA RD+IE+ADRI+D QRRASRA + AP V +S + +A P+D+SIDP TG+LIAT K S SVRGPETSIC EA ++GI GE+AGQVGK K LY ERYG EA R+IP R TTFRGKPF E +Y++RDADLIQ+AIRIVC P
Sbjct: 24 MDSITIDATTGVVGVKTLIWHIMPQLHTSSVLKGVHRALQD-SGASMDTTLINGRLTKTATVGLCCSILDNMRGTKWDQWRQSSGPAFKDALREHVASVVSSGQVEQAHPPVQQADEQHVEGVETKAVVLRKSLRAMNIEGSVRVDERSGMVSDIDVIKMLCPEKNDDYAKIALKRILERQQQEADHNDSDSA------PLADRVHYLKINGVGHVTPVSDAPTAIEIIWLLPARAAREFRKQSADTIARVLGGDVSLCAEIEQRCARLQNTEEGRAYQSVMTGEAPPKKHKSLPE-WFEYATSDQKSAYVAAKVKKSVVVTEIEMHEICKVGLESVGQFAGRDEIEYADRIRDTQRRASRADNLLGAPAPSPAVVGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAARLGISTGERAGQVGKVAKRLYGERYGEEANRDIPTRHTTFRGKPFVERTYFSRDADLIQRAIRIVCCP 503
BLAST of mRNA_C-linearis_contig112.1524.1 vs. uniprot
Match: A0A6H5K200_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K200_9PHAE) HSP 1 Score: 483 bits (1243), Expect = 1.660e-164 Identity = 273/498 (54.82%), Postives = 337/498 (67.67%), Query Frame = 1
Query: 1 MENLIVDASTGHVGVVSMMTTARPALNPKGVLRSVKGILQDYSGPNISKRQVEGRITSVVPSEVCEYILDNISGQGWDTWRVASGDVFKQSLRNHVERVCSSLQAQSQHQQVQQMPSNQIEQDE-TKASLLTKALRTVNIDGSVRIDEDSGIASIIDAIRLLCPEASPENAAHMLTRVLEKENADGGNNHVPVVQSPIPIPIADRVSYIKINGHGNITPTCDAKTLIEIIWLLPAQAAKEVRRQSAETICRVLGGDVSLCDEIEQRCASLKSIEEGRTYQNFVMDQGPAKKHRSEPPFWFEYASDEQKSAFVS-------VVAKKAIALEEIDMHETCKQKLESLGHFAPRDKIEFADRIKDIQRRASRA---IAAAP-VDNSTISV--ARPVDDSIDPATGLLIATP----KCSESVRGPETSICNEAGKMGIKVGEKAGQVGKKVKHLYSERYGVEAGRNIPKRDTTFRGKPFPENSYWARDADLIQKAIRIVCVP 1440
+ N+++DAS+G V V SM+ P L+ G+L++V +L DY+GP +S R + GR+ E+C ILD +SG W WR SG+ FK++L VE V SS +Q++ Q+Q P Q Q ++L KALR++NI+GSVRID+ G SIID RL+C A AA M TRVLE+E DGG++ + Q+P PI ADRV YI+INGHG +TP D+KT++EIIWLLP+ +AKE RRQSAETICRVLGGD+SLC EIEQRCA L+S EEGR YQ+FV DQGPAKK R+ P WFEYA+ E+K A++S V+AKKA+ L ++D+ ETCK+KL S+G F D+IEFADRIKDIQRRA R I AAP VD S ISV A PVDD+IDP TG K SVRGPETSIC EAGKMG V YSERYG EAGR IPKR TTFRGKPF +Y+ARD+DLIQ+AIRIVC P
Sbjct: 5 INNIVIDASSGDVAVKSMIKNIMPNLSEGGILKTVHRVLGDYNGPKMSTRLMNGRLACAATLELCYEILDKMSGPPWRKWREESGNAFKEALCERVESVRSS--SQTEQFQLQSPPQPQPPQKVGITTAVLQKALRSININGSVRIDDGCGKESIIDTTRLVCRGAYSAYAAQMFTRVLEEERNDGGSSFMRGEQTPTPI--ADRVDYIRINGHGKVTPVSDSKTIVEIIWLLPSGSAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQSFVTDQGPAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLRDVDVFETCKEKLNSVGQFDEGDEIEFADRIKDIQRRAKRVDNMITAAPAVDTSPISVCAAMPVDDTIDPETGEKAGQTGKVVKRLPSVRGPETSICVEAGKMGSSVXXXXXXXXXXXXXXYSERYGQEAGRKIPKRSTTFRGKPFSGKTYYARDSDLIQRAIRIVCAP 498
BLAST of mRNA_C-linearis_contig112.1524.1 vs. uniprot
Match: A0A6H5L5N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE) HSP 1 Score: 466 bits (1198), Expect = 7.680e-154 Identity = 267/482 (55.39%), Postives = 326/482 (67.63%), Query Frame = 1
Query: 1 MENLIVDASTGHVGVVSMMTTARPALNPKGVLRSVKGILQDYSGPNISKRQVEGRITSVVPSEVCEYILDNISGQGWDTWRVASGDVFKQSLRNHVERVCSSLQAQSQHQQVQQMPSNQIEQDETKASLLTKALRTVNIDGSVRIDEDSGIASIIDAIRLLCPEASPENAAHMLTRVLEKENADGGNNHVPVVQSPIPIPIADRVSYIKINGHGNITPTCDAKTLIEIIWLLPAQAAKEVRRQSAETICRVLGGDVSLCDEIEQRCASLKSIEEGRTYQNFVMDQGPAKKHRSEPPFWFEYASDEQKSAFVS-------VVAKKAIALEEIDMHETCKQKLESLGHFAPRDKIEFADRIKDIQRRASRA---IAAAP-VDNSTISV--ARPVDDSIDPATGLLIATPKCSESVRGPETSICNEAGKMGIKVGEKAGQVGKKVKHLYSERYGVEAGRNIPKRDTTFRGKPFPENSYWARDADL 1407
+ N+++DAS+G V V SM+ P L+ G+L++V +L D +GP +S R + GR+ E+C ILD ++G W WR SG+ FK +LR VE V S+ Q + Q +Q K ++L ALR++NI GSVRID+ G ASIID +RL+ P ASPE AA M TRVL+KE D GN V Q+P PI ADRV YI+ING G +TP DAKT++EIIWLLP+ AAKE RRQSAETICRVLGGD+SLC EIEQRCA L+S EEGR YQ+F+ DQGPAKK R+ P FEYA+ E+K A++S V+AKKA+ L ID+ ETCK+KL+S+G F R +IEFADRIKD+QRRA+R I AAP VD S +SV A PVDD+ID TGLLI TPKCS SVRGPETSIC EAGKMGI VGEKAGQVGK VK L TTFRGKPF EN+Y+A A L
Sbjct: 5 INNIVIDASSGDVAVKSMIKNIMPNLSESGILKTVHRVLGDCNGPKMSTRLMNGRLACAATLELCFEILDTMTGPPWRKWRSESGNAFKGALRERVESVRSASQTE-QLXXXXXXXXXXPQQVGIKTAVLQNALRSINIHGSVRIDDGLGKASIIDTVRLISPTASPEYAAQMFTRVLQKERGDCGNTSVRDEQTPTPI--ADRVDYIRINGRGKVTPVSDAKTIVEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQSFMTDQGPAKKQRAAMPARFEYATAEEKRAYISIEATTSKVLAKKALVLRYIDVFETCKEKLKSVGQFDERAQIEFADRIKDVQRRATRVDNMITAAPAVDTSPVSVCVAMPVDDTIDTETGLLIETPKCSPSVRGPETSICVEAGKMGIGVGEKAGQVGKVVKRL-----------------TTFRGKPFSENTYYALFAVL 466
BLAST of mRNA_C-linearis_contig112.1524.1 vs. uniprot
Match: B5LWM4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM4_9PHYC) HSP 1 Score: 323 bits (829), Expect = 8.820e-104 Identity = 181/358 (50.56%), Postives = 238/358 (66.48%), Query Frame = 1
Query: 412 NIDGS-VRIDEDSGIASIIDAIRLLCPEASPENAAHMLTRVLEKENADGGNNHVPVVQSPIPIPIADRVSYIKINGHGNITPTCDAKTLIEIIWLLPAQAAKEVRRQSAETICRVLGGDVSLCDEIEQRCASLKSIEEGRTYQNFVMDQG--------PAKKHRS-EPPFWFEYASDEQKSAFVSVVAKKAIALEEIDMHETCKQKLESLGHFAPRDKIEFADRIKDIQRRASRA---IAAAPVDNSTI--SVARPVDDSIDPATGLLIATPKCSESVRGPETSICNEAGKMGIKVGEKAGQVGKKVKHLYSERYGVEAGRNIPKRDTTFRGKPFPENSYWARDADLIQKAIRIVCVP 1440
++DGS +R+D+++ + S+ID IR++ E NA L R+ V+ P + ++ + +K+NG G TP DAKTLIEI+WLLP + A R Q ICR+LGGD SL EIE R A+L EEGR Q F ++ K+ RS E P WF+ A+ E+K AF S + KAI EE++M++ CK KLES+G F RD IEF DR++D QRRA RA + + PVD++ + +VARPVDD+ID ATGL +ATP+CSESVRG ETSICNEA K+GI VGEK G++GK++ Y++RYGVEAG NIPKR TT+RGKPF EN YW+RDADL+Q+AIRIVC P
Sbjct: 24 SMDGSTIRVDKNTKLGSVIDTIRMVL-ECDSSNANTSLGRL--------------VLSHP---GLGEKYTQLKVNGRGKPTPVADAKTLIEIVWLLPGRRAHAFRCQRVGKICRLLGGDTSLVSEIEARHATLTGTEEGRATQEFFLNDNHVTIDQPDQVKELRSGEEPSWFKNATAEEKRAFASTMVNKAIVSEEVEMYDFCKAKLESVGQFTTRDMIEFGDRVRDAQRRALRAGNMMTSTPVDDTVVISAVARPVDDTIDSATGLPLATPECSESVRGVETSICNEAAKLGICVGEKGGEIGKELIRRYTKRYGVEAGLNIPKRPTTYRGKPFNENCYWSRDADLVQEAIRIVCSP 363
BLAST of mRNA_C-linearis_contig112.1524.1 vs. uniprot
Match: A0A6H5JG13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG13_9PHAE) HSP 1 Score: 309 bits (792), Expect = 7.880e-97 Identity = 203/505 (40.20%), Postives = 286/505 (56.63%), Query Frame = 1
Query: 1 MENLIVDASTGHVGVVSMMTTARPALNPKGVLRSVKGILQDYSGPNISKRQVEGRITSVVPSEVCEYILDNISGQGWDTWRVASGDVFKQSLRNHVERV-CSSLQAQSQHQQVQQMPSNQIEQD--ETKASLLTKALRTVNIDGSVRIDEDSGIASIIDAIRLLCPEASPENAAHMLTRVLEKENA----DGGNNHVPVVQSPIPIPIADRVSYIKINGHGNITPTCDAKTLIEIIWLLPAQAAKEVRRQSAETICRVLGGDVSLCDEIEQRCASLKSIEEGRTYQNFVM-----DQGPAKKHRSEPPFWFEYASDEQKSAFVS-------VVAKKAIALEEIDMHETCKQKLESLGHFAPRDKIEFADRIKDIQRRASRA--IAAAPVDN--STISVARPVDDSIDPAT----GLLIATPKCSESVRGPETSICNEAGKMGIKVGEKAGQVGKKVKHLYSERYGVEAGRNIPKR-DTTFRGKPFPENSYWARDADLIQKAIRIV 1431
M+N++VDA+ G VGV SM+ A+P L+ VL SV+ ++++ GP ++ + V+GR T++ + C+YILDN+ G W WR G+ FK+SL HV ++ Q + ++EQ+ ETK S L KA RT+NIDGSVRIDE SG AS++D IRLL P S +NA ML+R+LEK+ G P SPI + + G + +AA+ RRQSAE I RVLGGDVSLC EIEQRCA L S EGR+ Q F+ ++ PAK+ R P E+A++EQ ++ V ++AI EI + + K+ E + PR KIE +DR+ D+Q+R R +A PV + + S + P ++++ AT G TP CS VRG E SI A +MG+ VG + G VGK +K LY+ERYG A NIPKR +T ++G+PF EN Y+ RD DL+++AIR+V
Sbjct: 1 MDNIVVDAA-GDVGVSSMIKAAKPELHSGSVLCSVRSAMKNFDGPGLTPKMVKGRTTTMASLDTCKYILDNMPGPRWVMWRSTQGNSFKESLTQHVAATHVQGVEDNVVEGVAQAAEAAEVEQEVAETKGSTLKKAFRTLNIDGSVRIDEASGKASVMDVIRLLSPGVSLDNARKMLSRLLEKDEVTELEQRGQLSGPQTHSPI------MCTTSRSTEKGGLP-----------------RAARSFRRQSAEVITRVLGGDVSLCGEIEQRCARLGSTSEGRSNQAFMSGENGTEEQPAKRTRVGPEI-MEFATEEQYEKYIKAGLQQEMVNIQQAIVKSEISLVMSLKEAFEKIQPLEPRQKIELSDRLSDVQKRYFRGGEESAMPVRDVRAITSSSTPAENAVVVATAVDPGHGTPTPNCSRDVRGAEVSIAMIATEMGVSVGGRGGLVGKNIKALYAERYGQNAANNIPKRKNTVYQGRPFKENMYFTRDRDLVERAIRMV 480
BLAST of mRNA_C-linearis_contig112.1524.1 vs. uniprot
Match: B5LW93_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LW93_9PHYC) HSP 1 Score: 291 bits (745), Expect = 4.000e-90 Identity = 182/501 (36.33%), Postives = 275/501 (54.89%), Query Frame = 1
Query: 1 MENLIVDASTGHVGVVSMMTTARPALNPKGVLRSVKGILQDYSGPNISKRQVEGRITSVVPSEVCEYILDNISGQGWDTWRVASGDVFKQSLRNHVERVCSSLQAQSQHQQVQQMPSNQIEQDETKASLLTKALRTVNIDGSVRIDEDSGIASIIDAIRLLCPEASPENAAHMLTRVLEKENADGGNNHVPVVQSPIPIPIADRVSYIKINGHGNITPTCDAKTLIEIIWLLPAQAAKEVRRQSAETICRVLGGDVSLCDEIEQRCASLKSIEEGRTYQNFVMDQGPAKKHRSEPPFWFEYASDEQKSAFVSVVAKKAIAL--------------------------EEIDMHETCKQKLESLGHFAP-RDKIEFADRIKDIQRRASRAIAAAPVDNSTISVARPVDDSIDPATGLLIATPKCSESVRGPETSICNEAGKMGIKVGEKAGQVGKKVKHLYSERYGVEAGRNIPKRDTTFRGKPFPENSYWARDADLIQKAI 1422
M+++IVD ++G +GV S+M P ++ + R V+ L+D + P KR + R + ++ + Y++D++ WR A+ D FK++LR+HV+ + L + V ETKAS+L LR+VNI GS+R+DED+G+ S+ID ++++CP+ A L RVLE+ P +AD V +KING G++TP DAKT+ EIIWLLP +AA+E RRQSAE + RVLGGD +LC EIE+R L+S EGR +QNF + +K R E+AS E FV + + + + E+ + + K+ +++ + R KIE +D + DIQRRA R + V+ ++DP G+ + TP C ++RG E SI +G+MG+ +G +AG GKK+K LY RYG +A NIPKR T F+G+P+ EN+Y+ARD DL+Q+AI
Sbjct: 1 MDSIIVDRASGLIGVSSIMKQIVPTVSDSTMWRMVEKTLRDSAVP---KRHL--RKSRMLTLDEAFYLVDHVQFPLSSEWRAANADTFKENLRSHVQAKTAPLVGDGGGESV-----------ETKASVLQNCLRSVNIIGSIRVDEDTGLGSLIDIVKIVCPDMCKVYAKTTLARVLEEW----------------PHHVADCVKRLKINGRGHVTPVADAKTIAEIIWLLPGRAAREFRRQSAEIVMRVLGGDTTLCKEIEERSVGLQSTREGRAFQNFALGGESGEKKRLGGEL-MEHASSEDYERFVKMKVEHEMCVMEQXXXXXXXXXXXXXXXXQEEGKVDSELRIVASLKRGFDAVNSLSESRHKIELSDIVSDIQRRALRKSVS-------------VETAVDP--GVSVPTPDCPANIRGEEVSIAMVSGEMGVHLGGRAGTAGKKLKVLYMARYGADAANNIPKRATIFQGRPYRENTYYARDKDLVQQAI 453
BLAST of mRNA_C-linearis_contig112.1524.1 vs. uniprot
Match: A0A6H5JDQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ1_9PHAE) HSP 1 Score: 271 bits (693), Expect = 2.080e-85 Identity = 142/220 (64.55%), Postives = 165/220 (75.00%), Query Frame = 1
Query: 271 SLRNHVERVCSSLQAQSQHQQVQQMPSNQIEQDETKASLLTKALRTVNIDGSVRIDEDSGIASIIDAIRLLCPEASPENAAHMLTRVLEKENADGGNNHVPVVQSPIPIPIADRVSYIKINGHGNITPTCDAKTLIEIIWLLPAQAAKEVRRQSAETICRVLGGDVSLCDEIEQRCASLKSIEEGRTYQNFVMDQGPAKKHRSEPPFWFEYASDEQKSAF 930
S+RNHVERVC L+AQ+QHQ S+ + ETK + L KALRTV I GSVRIDE++G SIID R+LCPEAS E AA MLTRVLEKE DG QS IP+ ++R+ Y++IN G +TP CDA TL+EIIWLLP+ AAKE RRQSA+TI RVLGGD SLCDEIEQRC L+S EEGR YQ F++DQGPAKK RSE PFWFEYASDE+K AF
Sbjct: 10 SVRNHVERVCQCLRAQAQHQL-----SDHVAHAETKTARLEKALRTVGIHGSVRIDENTGKGSIIDVNRMLCPEASAEYAAKMLTRVLEKEKRDGMERPGQNAQSTIPL--SERIEYVRINDKGPVTPICDASTLVEIIWLLPSNAAKEFRRQSAQTITRVLGGDTSLCDEIEQRCDRLQSTEEGRAYQGFLLDQGPAKKQRSEEPFWFEYASDEEKRAF 222
BLAST of mRNA_C-linearis_contig112.1524.1 vs. uniprot
Match: A0A6H5JC19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC19_9PHAE) HSP 1 Score: 268 bits (685), Expect = 5.650e-82 Identity = 145/241 (60.17%), Postives = 177/241 (73.44%), Query Frame = 1
Query: 727 QSAETICRVLGGDVSLCDEIEQRCASLKSIEEGRTYQNFVMDQGPAKKHRSEPPFWFEYASDEQKSAFVSVVAKKAIALEEIDMHETCKQKLESLGHFAPRDKIEFADRIKDIQRRA---SRAIAAAPVD--NSTISVARPVDDSIDPATGLLIATPKCSESVRGPETSICNEAGKMGIKVGEKAGQVGKKVKHLYSERYGVEAGRNIPKRDTTFRGKPFPENSYWARDADLIQKAIRIVC 1434
Q A+ + +VLG ++E +L ++ YQNFV+DQ PAKK RSE PFWF +AS EQK +VSV+A KA+ LE++D+ +T K +L+S+ F RD IEFADRIKDIQ RA S +AA P+D NS ++VARPV+DSIDP TGL IAT CSESVRGPETSICNEA KMG K+GEKAGQVGK K LY +R+GV A NIPKR T FRGKPF EN++W RDAD+IQ+AIRIVC
Sbjct: 129 QRADMLTKVLGRG-----KLEYHRKALMNLP--MAYQNFVLDQSPAKKQRSEAPFWFNFASGEQKRDYVSVMANKAMTLEQMDLCKTLKDELQSVNQFTGRDSIEFADRIKDIQMRALAPSNMLAAVPMDADNSIVAVARPVNDSIDPETGLRIATATCSESVRGPETSICNEAAKMGFKLGEKAGQVGKMAKSLYRKRHGVAAAANIPKRHTIFRGKPFSENTHWQRDADIIQEAIRIVC 362 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig112.1524.1 >prot_C-linearis_contig112.1524.1 ID=prot_C-linearis_contig112.1524.1|Name=mRNA_C-linearis_contig112.1524.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=480bp MENLIVDASTGHVGVVSMMTTARPALNPKGVLRSVKGILQDYSGPNISKRback to top mRNA from alignment at C-linearis_contig112:235659..237098+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig112.1524.1 ID=mRNA_C-linearis_contig112.1524.1|Name=mRNA_C-linearis_contig112.1524.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1440bp|location=Sequence derived from alignment at C-linearis_contig112:235659..237098+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig112:235659..237098+ >mRNA_C-linearis_contig112.1524.1 ID=mRNA_C-linearis_contig112.1524.1|Name=mRNA_C-linearis_contig112.1524.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2880bp|location=Sequence derived from alignment at C-linearis_contig112:235659..237098+ (Chordaria linearis ClinC8C monoicous)back to top |