mRNA_C-linearis_contig112.1521.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig112.1521.1 vs. uniprot
Match: D7FQS4_ECTSI (Peroxisomal membrane protein 70 abcd3, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS4_ECTSI) HSP 1 Score: 865 bits (2235), Expect = 3.050e-302 Identity = 541/718 (75.35%), Postives = 568/718 (79.11%), Query Frame = 2
Query: 512 LLKYFQSELSLRFRQRLTEHVMSKYMKGFNFYAVSNLDDRIANADQAITQDIERFADSVAELYSNITKPVLDMLVYVRRLSDKVDAAAPATMIAYLLLSGVALGALRKPTGMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLQGVFDKLVCVTRRSERFRHSLGALDSVVAKYFATIVGWTVVSRPFVNRDHPRHADSTPAEVYQDYHSSGRMMLNLSAALGRLVLSGRELARLSGFSSRVTGLIDVIDDVNRGVYKRGQEPSTTDPATAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADMAQARITPLTHRNAGVAGVNLAAE---HSPSSILTRTTAPAARSSPGH------DPSGLHPVTAESFVAPGR-LDIGALPSE----------------VRGQPELAPEGSAGSATXXXXXXXXXXAPAEGVGENGAGLAGGEGRGAXXXXXXXXXXXXXXXXXXXXXXXXVIEFTDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLLKPPGSRLFYVPQRPYLALGTLRDQVIYPHTRQEAATRGMTDGDLLSVLESVRLGYLLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGEIYSLAARSGITLFTVSHRKSLWKHHSYLLRFDGLGGYEFKPMSDIGVAEQFGS 2587
+LKY QSELSLRFRQRLTEHVMSKYM+GF FYAVSNLDDRIANADQAITQD+ERFA S+AEL+SNITKPVLDML+YVRRLSDKVDA APATMIAYLLLSGVAL ALRKPT MYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGN KEKQVL+GVFDKLV VTRRSERFRHSLGALDSVVAKYFA++VGWTVVSRPFVNRDHPRHA ST AEVYQDYHSSGRMML L+AALGRLVLSGRELARLSGFSSRVTGLIDVIDD NRGV+KRGQ P++ ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ARITP RN GV+GVNLA E +SPS A PG D SG P S P R I P++ GQPEL PE XXXXXXXXXX XXXXX VIEF DVPLVTPTGEVL+EALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTL KPP SRLFYVPQRPYLALGTLRDQVIYPHTRQEAA++G+TD DLLSVL+SVRLGY+LDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEG+IY LAA SGITLFTVSHRKSLWKHH YLLRFDGLGGYEFK MSD+ E FGS
Sbjct: 19 VLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMAELFSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQVPNSP-----GAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARITP-PRRNPGVSGVNLATEEDGNSPSWAADEGGREGASGEPGRIGNEDGDVSGTIPRLTSSLSEPARPSSISRAPADGHPAMMAGTKASAVGVALGQPELEPEAXXXXXXXXXXXXXXXXXXXXXX--------------XXXXXXRPGAPPLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLVEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGVTDVDLLSVLDSVRLGYVLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKAMSDVAGDEHFGS 716
BLAST of mRNA_C-linearis_contig112.1521.1 vs. uniprot
Match: A0A835Z212_9STRA (ATP-binding cassette sub-family D member 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z212_9STRA) HSP 1 Score: 664 bits (1712), Expect = 8.460e-225 Identity = 404/760 (53.16%), Postives = 494/760 (65.00%), Query Frame = 2
Query: 308 MVPGPFSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVARNKSGFKGGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMKGFNFYAVSNLDDRIANADQAITQDIERFADSVAELYSNITKPVLDMLVYVRRLSDKVDAAAPATMIAYLLLSGVALGALRKPTGMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLQGVFDKLVCVTRRSERFRHSLGALDSVVAKYFATIVGWTVVSRPFVNRDHPRHADSTPAEVYQDYHSSGRMMLNLSAALGRLVLSGRELARLSGFSSRVTGLIDVIDDVNRGVYKRGQEPSTTDPATAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADMAQARITPLTHRNAGVAGVNLAAEHSPSSILTRTTAPAARSSPGHDPSGLHPVTAESFVAPGRLDIGALPSEVRGQPELAPEGSAGSATXXXXXXXXXXAPAEGVGENGAGLAGGEGRGAXXXXXXXXXXXXXXXXXXXXXXXXVIEFTDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLLKPPGSRLFYVPQRPYLALGTLRDQVIYPHTRQEAATRGMTDGDLLSVLESVRLGYLLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGEIYSLAARSGITLFTVSHRKSLWKHHSYLLRFDGLGGYEFKPMSDIGVAEQFGS 2587
MVPG S EAG L VAGLLL RT LD+ ML LTTT+ERAIV R+ F G+ FA+ VP+++VNSLLKY QSE++LRFRQRLT H+M +YM GF +Y V+NLD R+ N DQAITQD+E FA+S+A+L+SN+TKP+LD+ +YVRRL+ +VD AP ++IAYLL SGVAL A+RKPTG+YTALV QEG YR+VN RL+T+A+EIAFY GN KEK VL F LV + RRS++FR+S+ +DS+ AKY A++VGW VSRPF+N PR D++P+ +YQ+YHS+GRMMLNLS ALGRLVLSGREL RLSGFS+RVT L+DVI+DV +G Y R Q ++ P XXXXXXXXXXXXXXXXXXXXXXXXXX A A ++ G AGV D SG G + R VIEF VPL TP G+VL+ +L+F+VE+GMNVLVAGPNG GKSSLFR+LGGLWP+RGG L+KP S++FYVPQRPYLALG+LR+QV+YP A D LL+V++ V+L YLLDREGGWDAV+DW+DVLSGGEKQRLA++R+ Y++P FAILDECTSAVSVDVEG IY+LA GITLFTVSHR+SLW++H +LL FDG GGYEFK +SD A FGS
Sbjct: 1 MVPGVLSPEAGFLAGVAGLLLLRTYLDITMLELTTTVERAIVQRDAGSFGRGVRTFAKFMVPLSIVNSLLKYGQSEVALRFRQRLTAHIMDRYMAGFTYYGVTNLDGRLKNVDQAITQDVELFAESMADLFSNVTKPMLDICLYVRRLARRVDPLAPYSLIAYLLASGVALTAMRKPTGLYTALVQHQEGVYRHVNGRLITHAEEIAFYGGNKKEKAVLSAAFADLVALVRRSQQFRYSMAVVDSIAAKYLASVVGWLTVSRPFLNLKDPRFKDASPSVLYQEYHSAGRMMLNLSQALGRLVLSGRELTRLSGFSARVTSLLDVIEDVAQGSYHRTQVRASPPPPNGTPKXXXXXXXXXXXXXXXXXXXXXXXXXXV--------------ASGAAEKLL-------GDAGVE------------------------DDESG-----------------GVVEESER----------------------------------------------------------------------VIEFDGVPLTTPNGDVLVRSLTFRVESGMNVLVAGPNGCGKSSLFRLLGGLWPVRGGRLVKPMRSKMFYVPQRPYLALGSLREQVLYPQAVDSRAPAA-DDEHLLAVMQQVKLEYLLDREGGWDAVKDWADVLSGGEKQRLAMARMLYNKPLFAILDECTSAVSVDVEGSIYTLARELGITLFTVSHRRSLWQYHDFLLMFDGRGGYEFKRISDQEQA--FGS 625
BLAST of mRNA_C-linearis_contig112.1521.1 vs. uniprot
Match: A0A2D4CER2_PYTIN (Long chain acyl-CoA transporter ABC transporter n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CER2_PYTIN) HSP 1 Score: 634 bits (1635), Expect = 1.640e-212 Identity = 362/819 (44.20%), Postives = 478/819 (58.36%), Query Frame = 2
Query: 140 SGSTLLLTLALIKHFSKPESGACPKDGGSRGERVRSTSRPKVDAAFLRRISRLLKVMVPGPFSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVARNKSGFKGGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMKGFNFYAVSNLDDRIANADQAITQDIERFADSVAELYSNITKPVLDMLVYVRRLSDKVDAAAPATMIAYLLLSGVALGALRKPTGMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLQGVFDKLVCVTRRSERFRHSLGALDSVVAKYFATIVGWTVVSRPFVNRDHPRHADSTPAEVYQDYHSSGRMMLNLSAALGRLVLSGRELARLSGFSSRVTGLIDVIDDVNRGVYKR---GQEPSTTDPATAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADMAQARITPLTHRNAGVAGVNLAAEHSPSSILTRTTAPAARSSPGHDPSGLHPVTAESFVAPGRLDIGALPSEVRGQPELAPEGSAGSATXXXXXXXXXXAPAEGVGENGAGLAGGEGRGAXXXXXXXXXXXXXXXXXXXXXXXXVIEFTDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLLKPPGSRLFYVPQRPYLALGTLRDQVIYPHTRQEAATRGMTDGDLLSVLESVRLGYLLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGEIYSLAARSGITLFTVSHRKSLWKHHSYLLRFDGLGGYEFKPMSDIGVAEQFGS 2587
S + LA+ + + S A +D ++ + + V+ FLRR RL KV+VPG F+ E G + VA LL ARTS D+ +L + T+IERAI++R+ GF + RF + +PVA VNSLLKY Q+EL+LRFR RLT H+ Y+KGF +Y VSNLD+RI NADQ +T D+ERF+ SVAELYSN++KP+LD+ +Y +L+ + PATM+AYL+ SG L LR+PTG +T + EG +R++NSRL+T+++EIAFY GN +EK +L F +L+ + R+S++FR S+ +DS+VAKYFAT+VG+ VVS+PF++ DHPRH ST AE +DY SG+M++ LS A+GRLVLSGREL RL+GF++RVT +++V+ D++RG Y+R EP++ D D D G D +P + + A +G LAP G VI+F VPLVTP G+VL+ +L +VE+GMNV+VAGPNG GKSSLFR+LG LWPL GGTL KP + LFY+PQRPYL LG+LRDQ+IYPHT + RG TD +LL +LE V+LGYL+ REGGWD V DW+DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEG +YS ITLFTVSHRKSLWK+H Y+LRFDG G YEFK + + E FGS
Sbjct: 16 SAGLIATALAIREQGRRCASAALREDSQFMTKKHGNKQKVAVNQEFLRRFLRLFKVIVPGVFTPEVGYALLVALLLAARTSFDIQILQIMTSIERAIISRSTDGFLLHLRRFLLVMLPVACVNSLLKYGQTELTLRFRDRLTRHLYDLYLKGFVYYKVSNLDNRIGNADQLLTVDVERFSHSVAELYSNVSKPLLDIAIYAVKLTSSIGFQGPATMLAYLVASGACLTWLRQPTGRFTIAEQKMEGNFRFMNSRLITHSEEIAFYNGNVREKHILDESFSRLISLLRQSQQFRFSVAVIDSIVAKYFATVVGFLVVSKPFLDLDHPRHRTSTYAERMEDYFRSGKMLVKLSEAMGRLVLSGRELTRLAGFTARVTEMLEVLGDLDRGTYQRTMLASEPTSKD-----------------------------------------------DED-------------------------------------------GDDDGNTNPKSKTTAAA----SLG-----------LAPNGGK-----------------------------------------------------MVFADHVIQFEGVPLVTPNGDVLVRSLDVRVESGMNVVVAGPNGCGKSSLFRILGELWPLFGGTLTKPARNGLFYIPQRPYLTLGSLRDQIIYPHTVADMRERGRTDDELLQLLERVQLGYLVAREGGWDVVHDWADVLSGGEKQRVAMARLFYHKPQFAILDECTSAVSVDVEGAMYSYCREQDITLFTVSHRKSLWKYHEYVLRFDGRGNYEFKKIEEAD--EAFGS 674
BLAST of mRNA_C-linearis_contig112.1521.1 vs. uniprot
Match: A0A0D2UCF6_CAPO3 (ATP-binding cassette n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UCF6_CAPO3) HSP 1 Score: 624 bits (1609), Expect = 1.090e-208 Identity = 347/779 (44.54%), Postives = 461/779 (59.18%), Query Frame = 2
Query: 251 SRPKVDAAFLRRISRLLKVMVPGPFSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVARNKSGFKGGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMKGFNFYAVSNLDDRIANADQAITQDIERFADSVAELYSNITKPVLDMLVYVRRLSDKVDAAAPATMIAYLLLSGVALGALRKPTGMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLQGVFDKLVCVTRRSERFRHSLGALDSVVAKYFATIVGWTVVSRPFVNRDHPRHADSTPAEVYQDYHSSGRMMLNLSAALGRLVLSGRELARLSGFSSRVTGLIDVIDDVNRGVYKRGQEPSTTDPATAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADMAQARITPLTHRNAGVAGVNLAAEHSPSSILTRTTAPAARSSPGHDPSGLHPVTAESFVAPGRLDIGALPSEVRGQPELAPEGSAGSATXXXXXXXXXXAPAEGVGENGAGLAGGEGRGAXXXXXXXXXXXXXXXXXXXXXXXXVIEFTDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLLKPPGSRLFYVPQRPYLALGTLRDQVIYPHTRQEAATRGMTDGDLLSVLESVRLGYLLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGEIYSLAARSGITLFTVSHRKSLWKHHSYLLRFDGLGGYEFKPMSDIGVAEQFGS 2587
S+ VD F R+ +LL++++PG F+ E G +V VA ++ RT D+ M+ TT IE I++R+ +GF+ G+ F +P++ V +LLKY +EL+LRFR RLT H+ S+Y++GF +Y +SNLD+RIANADQ +TQD+E+F DS+A+LYSN++KP+LD+ +Y R+L+ + A PA M+AYL +SG L LR+PTG YT + EGE+R+VNSRL+TNA+EIAFY GN KEK V+ F++LV + RRS +FR +G +DS VAKYFATI+G+TVVSRPF++ R + +E+ +DY+ SGRM++NL+ A+GRLVL+GREL RL+GF++R+T L++V+ D+N YKR T + + AG + AA+ D SGL P VAP I VI+F +VPLVTP G++L+ ALSF+V++G NVLVAGPNG GKSSLFR LG LWP+ GG L KP +LFYVPQRPY+ LGTLRDQVIYPH++ + A RGMTD DLL L+ V+L YL DRE GWDAV+DW DVLSGGEKQR+A++RLFYHRPQFAILDECTSAVSVDVEG +Y + ITLFTVSHRKSLW+HH Y+L+FDG G YE++ + AE FGS
Sbjct: 57 SKIAVDGVFFARLRKLLRIVIPGVFTPEMGFIVLVAAAMVGRTYCDLWMIKTTTAIESTIISRDAAGFREGLVHFFNALLPISCVTNLLKYGLNELALRFRTRLTNHLYSEYLRGFTYYKISNLDNRIANADQLLTQDLEKFCDSIADLYSNVSKPILDIFIYARKLAGSIGAQGPAYMLAYLAVSGAFLTRLRRPTGWYTVNEQRLEGEFRFVNSRLITNAEEIAFYNGNEKEKLVITQTFNRLVNMLRRSMQFRFGMGVIDSFVAKYFATIIGFTVVSRPFMDPTSERFKGMSHSEMMEDYYKSGRMLINLATAVGRLVLAGRELTRLAGFTTRMTDLMEVLHDLNHDRYKR----------------------------------------------------------------TMVQSQQAGASATAAAAQ---------------------DNSGLPP------VAPNAGKI-------------------------------------------------------------------------FYQDHVIKFENVPLVTPNGDILVRALSFEVKSGCNVLVAGPNGCGKSSLFRTLGELWPIFGGKLTKPAKEKLFYVPQRPYMTLGTLRDQVIYPHSQADLAKRGMTDADLLEFLKQVKLDYLADRENGWDAVQDWMDVLSGGEKQRVAMARLFYHRPQFAILDECTSAVSVDVEGFMYDHCRKLNITLFTVSHRKSLWRHHEYVLQFDGKGVYEYRAIDH--KAEHFGS 669
BLAST of mRNA_C-linearis_contig112.1521.1 vs. uniprot
Match: A0A5D6XLN4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLN4_9STRA) HSP 1 Score: 622 bits (1605), Expect = 4.180e-208 Identity = 357/830 (43.01%), Postives = 487/830 (58.67%), Query Frame = 2
Query: 101 ALAAPSQLRSNTFSGSTLL-LTLALIKHFSKPESGACPKDGGSRGERVRSTSRPKVDAAFLRRISRLLKVMVPGPFSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVARNKSGFKGGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMKGFNFYAVSNLDDRIANADQAITQDIERFADSVAELYSNITKPVLDMLVYVRRLSDKVDAAAPATMIAYLLLSGVALGALRKPTGMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLQGVFDKLVCVTRRSERFRHSLGALDSVVAKYFATIVGWTVVSRPFVNRDHPRHADSTPAEVYQDYHSSGRMMLNLSAALGRLVLSGRELARLSGFSSRVTGLIDVIDDVNRGVYKRGQEPSTTDPATAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADMAQARITPLTHRNAGVAGVNLAAEHSPSSILTRTTAPAARSSPGHDPSGLHPVTAESFVAPGRLDIGALPSEVRGQPELAPEGSAGSATXXXXXXXXXXAPAEGVGENGAGLAGGEGRGAXXXXXXXXXXXXXXXXXXXXXXXXVIEFTDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLLKPPGSRLFYVPQRPYLALGTLRDQVIYPHTRQEAATRGMTDGDLLSVLESVRLGYLLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGEIYSLAARSGITLFTVSHRKSLWKHHSYLLRFDGLGGYEFKPMSDIGVAEQFGS 2587
A+ + S++ S S S L+ + +A+ H + + A +D ++ + + V+ F R +L KV+VPGPF+ E VA LL ARTS D+++L + T+IERAI++R+ F + RF L +P++ VN LLKY +EL+LRFR RLT+H+ Y+KGF +Y VSNLD+RI+NADQ +T D+ERF++SVA+LYSN++KP+LD+++Y +L+ + A PATM+AYL++SG+ L LR+PTG +T + EG +R++NSRL+T+++EIAFY GN +EK++L F +L+ + R+S++FR S+ +D++VAKY AT+VG+ VVS+PF++ PRH ST AE +DY SG+M++ L+ A+GRLVLSGREL RL+GF++RVT +IDV+ D++ G Y+R S D A DAD A T A S+ G GLHP + G L VI+F DVPLVTP G+VL+ AL+ +VE+GMNV+VAGPNG GKSSLFR+LG LWPL GGTL KP + LFY+PQRPYL LG+LRDQVIYPH+ ++ G+TD DL LE V+LGYL+ REGGWD V DW+DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEG +Y+ ITLFTVSHRKSLWK+H ++LRFDG G YEFK + + E FGS
Sbjct: 2 AVLSTSRVTSGALSVSALVAIAIAIRDHGQRVANAASRQDSQFMTKKQGNKQKVAVNKEFYLRFVKLFKVIVPGPFTAEVAFAALVAALLAARTSFDIMVLQIITSIERAIISRSTEDFTRHLRRFFVLMLPMSCVNCLLKYGHTELTLRFRNRLTKHLYKHYLKGFIYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNLSKPMLDIVIYSAKLTSSIGAQGPATMLAYLVVSGMFLTWLRQPTGRFTIAEQKMEGNFRFMNSRLITHSEEIAFYNGNVREKKILDESFARLIDLVRKSQQFRFSVSVIDNIVAKYLATVVGFLVVSKPFLDMSDPRHLKSTYAERMEDYFRSGKMLIKLAEAMGRLVLSGRELTRLAGFTARVTEMIDVLSDLDEGRYQRTMLKSDDDDA--------------------------------------------GDADGA--------------------------------TKSATTSAEGL---GLHP------------NKGVL----------------------------------------------------------------------VHRDHVIQFEDVPLVTPNGDVLVRALNLRVESGMNVVVAGPNGCGKSSLFRILGELWPLFGGTLTKPARNGLFYIPQRPYLTLGSLRDQVIYPHSLEDMQASGLTDADLEFFLEKVQLGYLVGREGGWDVVHDWADVLSGGEKQRVAMARLFYHKPQFAILDECTSAVSVDVEGAMYNHCREQNITLFTVSHRKSLWKYHEHVLRFDGRGNYEFKKIDEAD--EAFGS 668
BLAST of mRNA_C-linearis_contig112.1521.1 vs. uniprot
Match: A0A8K1FFC8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFC8_PYTOL) HSP 1 Score: 620 bits (1600), Expect = 2.050e-207 Identity = 346/815 (42.45%), Postives = 475/815 (58.28%), Query Frame = 2
Query: 158 LTLALIKHFSKPESGACPKDGGSRGERVRSTSRPKVDAAFLRRISRLLKVMVPGPFSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVARNKSGFKGGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMKGFNFYAVSNLDDRIANADQAITQDIERFADSVAELYSNITKPVLDMLVYVRRLSDKVDAAAPATMIAYLLLSGVALGALRKPTGMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLQGVFDKLVCVTRRSERFRHSLGALDSVVAKYFATIVGWTVVSRPFVNRDHPRHADSTPAEVYQDYHSSGRMMLNLSAALGRLVLSGRELARLSGFSSRVTGLIDVIDDVNRGVYKR-----GQEPSTTDPATAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADMAQARITPLTHRNAGVAGVNLAAEHSPSSILTRTTAPAARSSPGHDPSGLHPVTAESFVAPGRLDIGALPSEVRGQPELAPEGSAGSATXXXXXXXXXXAPAEGVGENGAGLAGGEGRGAXXXXXXXXXXXXXXXXXXXXXXXXVIEFTDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLLKPPGSRLFYVPQRPYLALGTLRDQVIYPHTRQEAATRGMTDGDLLSVLESVRLGYLLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGEIYSLAARSGITLFTVSHRKSLWKHHSYLLRFDGLGGYEFKPMSDIGVAEQFGS 2587
L LA+ + + A +D ++ + + ++ FL R RL KV+VPG + E G VAGLL ARTS D+++L + T+IERAI++R+ GF + RF + +PV+ VN LLKY Q+EL+LRFR RLT H+ Y+KGF +Y VSNLD+RI+NADQ +T D+ERF++SV++LYSN++KP+LD+ +Y L+ + PATM+ YL+ SG+ L LR+PTG +T + EG +R++N+RL+T+++EIAFY GN +EK++L F +L+ + R+S++FR S+ +D++VAKYFAT+VG+ VVSRPF++++HPRH +S+ AE +DY SG+M++ LS A+GRLVLSGREL RL+GF++RVT ++DV+ D++ G Y+R +E S + P AS+ SS+ GL+P E VI+F DVPLVTP G+VL++AL+ +VE+GMNV+VAGPNG GKSSLFR+LG LWPL GG L KP + LFY+PQRPYL LG+LRDQ+IYPH+ ++ G T+ DLL LE V+LGYL+DREGGWD V DW+DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEG +Y+ ITLFTVSHRKSLWK+H Y+LRFDG G Y+FK + + E FGS
Sbjct: 22 LALAIHERGQRKAGEALREDSQFMTKKHGNKQKVAINKEFLTRFMRLFKVIVPGLVTPEVGYAFLVAGLLAARTSFDILILQIVTSIERAIISRSTEGFMHHLRRFFLVMLPVSCVNCLLKYGQTELTLRFRNRLTRHLYDLYLKGFIYYKVSNLDNRISNADQLLTVDVERFSNSVSDLYSNVSKPLLDICIYAVELTSSIGFQGPATMLGYLVFSGMFLTWLRQPTGRFTIAEQKMEGNFRFMNARLITHSEEIAFYNGNVREKRILDQSFTRLIDLVRQSQQFRFSISVIDNIVAKYFATVVGYFVVSRPFLDKEHPRHLNSSYAERMEDYFRSGKMLIKLSEAMGRLVLSGRELTRLAGFTARVTEMMDVLTDLDEGRYQRTMLKDNEEDSESSPTAKASA----------------------------------------------------------------------SSL------------------GLYPNKGEMLYE----------------------------------------------------------------------------------DHVIQFEDVPLVTPNGDVLVKALNVRVESGMNVVVAGPNGCGKSSLFRILGELWPLFGGKLTKPERNGLFYIPQRPYLTLGSLRDQIIYPHSHEDMIASGRTEADLLEFLEKVQLGYLVDREGGWDVVHDWADVLSGGEKQRVAMARLFYHKPQFAILDECTSAVSVDVEGAMYNHCREQNITLFTVSHRKSLWKYHEYVLRFDGRGDYQFKKIEEAD--EAFGS 664
BLAST of mRNA_C-linearis_contig112.1521.1 vs. uniprot
Match: A0A484E539_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E539_BRELC) HSP 1 Score: 608 bits (1568), Expect = 1.310e-202 Identity = 346/831 (41.64%), Postives = 481/831 (57.88%), Query Frame = 2
Query: 101 ALAAPSQLRSNTFS-GSTLLLTLALIKHFSKPESGACPKDGGSRGERVRSTSRPKVDAAFLRRISRLLKVMVPGPFSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVARNKSGFKGGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMKGFNFYAVSNLDDRIANADQAITQDIERFADSVAELYSNITKPVLDMLVYVRRLSDKVDAAAPATMIAYLLLSGVALGALRKPTGMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLQGVFDKLVCVTRRSERFRHSLGALDSVVAKYFATIVGWTVVSRPFVNRDHPRHADSTPAEVYQDYHSSGRMMLNLSAALGRLVLSGRELARLSGFSSRVTGLIDVIDDVNRGVYKRGQEPSTTDPATAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADMAQARITPLTHRNAGVAGVNLAAEHSPSSILTRTTAPAARSSPGHDPSGLHPVTAESF-VAPGRLDIGALPSEVRGQPELAPEGSAGSATXXXXXXXXXXAPAEGVGENGAGLAGGEGRGAXXXXXXXXXXXXXXXXXXXXXXXXVIEFTDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLLKPPGSRLFYVPQRPYLALGTLRDQVIYPHTRQEAATRGMTDGDLLSVLESVRLGYLLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGEIYSLAARSGITLFTVSHRKSLWKHHSYLLRFDGLGGYEFKPMSDIGVAEQFGS 2587
A+ + S S S S + L +A+ KH + + A +D ++ S + +D F R RL KV+VPGPF+ E G VA +L+ARTS D+V+L+ T +E+AI++R+++ F + RF + +P++ VNSLLKY +EL LRFR RLT+H+ +Y+KGF +Y VSNLD+RI+NADQ +T D+ERF++SVA+LYSN++KP+LD+ +Y +LS + P M++YLL SG L LR+PT +T + Q EG +RY+NSRL+T+++EIAFY GN +EK++L+ F +L+ + R S++FR SL +D+VVAKY AT+VG V++RP+++ + R +S+ A+ +DY SG+M+L +S A+GRLVLSGREL RL+GF++R+T ++DV+ D++ G Y+R M Q R E + T+T ++AES + P + DI VI+F VPLVTP G+VL+ +L KV++GMNV+VAGPNG GKSSLFR+LG LWPL GGTL KP + LFY+PQRPYL LGTLRDQ++YPH+ ++ G TD DL+ LE V+LG+L++REGGWD +RDW+DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEG +YS ITLFTVSHRKSLW HH Y+LRFDG G YEFK +++ E FGS
Sbjct: 2 AVMSKSSAASGAVSIASIVALAIAIRKHGQEKANAALSRDSEFMTKKQGSRQKVAIDRKFYYRFLRLFKVIVPGPFTAEIGFAALVACMLVARTSFDIVLLHAFTAVEKAIISRSQTEFMVHLRRFVAIMLPMSCVNSLLKYGHTELCLRFRTRLTQHLYGQYVKGFVYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNMSKPILDIAIYAIKLSSTIGVEGPIVMLSYLLASGFFLTYLRQPTSQFTIVEQQMEGTFRYMNSRLITHSEEIAFYNGNVREKRILEQSFHRLINLVRSSQQFRFSLSVIDNVVAKYLATLVGCAVLARPYMDISNKRLGNSSYADRMEDYFRSGKMLLKMSEAMGRLVLSGRELTRLAGFTARITEMMDVLTDLDEGKYQR---------------------------------------------------------TMLQGR-----------------EEDTLEESKTQT------------------ISAESLGLYPNKGDI-------------------------------------------------------------------------CYRDYVIQFEHVPLVTPNGDVLVPSLDIKVKSGMNVVVAGPNGCGKSSLFRILGELWPLFGGTLTKPERNGLFYIPQRPYLTLGTLRDQIVYPHSLKDMQVSGKTDDDLMVFLEKVQLGHLVEREGGWDIIRDWADVLSGGEKQRVAMARLFYHKPQFAILDECTSAVSVDVEGAMYSYCREQNITLFTVSHRKSLWIHHEYVLRFDGRGHYEFKKINEAD--EAFGS 665
BLAST of mRNA_C-linearis_contig112.1521.1 vs. uniprot
Match: K3WXJ7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXJ7_GLOUD) HSP 1 Score: 606 bits (1563), Expect = 7.340e-202 Identity = 346/825 (41.94%), Postives = 475/825 (57.58%), Query Frame = 2
Query: 116 SQLRSNTFSGSTLL-LTLALIKHFSKPESGACPKDGGSRGERVRSTSRPKVDAAFLRRISRLLKVMVPGPFSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVARNKSGFKGGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMKGFNFYAVSNLDDRIANADQAITQDIERFADSVAELYSNITKPVLDMLVYVRRLSDKVDAAAPATMIAYLLLSGVALGALRKPTGMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLQGVFDKLVCVTRRSERFRHSLGALDSVVAKYFATIVGWTVVSRPFVNRDHPRHADSTPAEVYQDYHSSGRMMLNLSAALGRLVLSGRELARLSGFSSRVTGLIDVIDDVNRGVYKRGQEPSTTDPATAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADMAQARITPLTHRNAGVAGVNLAAEHSPSSILTRTTAPAARSSPGHDPSGLHPVTAESFVAPGRLDIGALPSEVRGQPELAPEGSAGSATXXXXXXXXXXAPAEGVGENGAGLAGGEGRGAXXXXXXXXXXXXXXXXXXXXXXXXVIEFTDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLLKPPGSRLFYVPQRPYLALGTLRDQVIYPHTRQEAATRGMTDGDLLSVLESVRLGYLLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGEIYSLAARSGITLFTVSHRKSLWKHHSYLLRFDGLGGYEFKPMSDIGVAEQFGS 2587
S++ + T S S L+ +++A+ H K + A +D +++ S + V+ F R +L KV+VPGPF+ E VA LL ARTS D+++L + T+IER+I++R++ F + RF L +P++ VN LLKY +EL+LRFR RLT+H+ Y+KGF +Y VSNLD+RI+NADQ +T D+ERF++SVA+LYSN++KPVLD+++Y +L+ + A PA M+AYL+LSG L LR+PTG +T + EG +R++NSRL+T+++EIAFY GN +EK++L F +L+ + R+S++FR S+ +D++VAKY AT+VG+ VVSRPF++ PR + T AE +DY SG+M++ LS A+GRLVLSGREL RL+GF++RVT ++DV+ D++ G Y+R S D S G +AE GLHP + VI+F DVPLVTP G+VL+ +L+ KV++GMNV+VAGPNG GKSSLFR+LG LWPL GG L KP + LFY+PQRPYL LG+LRDQ+IYPH+ ++ G+ D DL LE V+LGYL+ REGGWD V DW+DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEG +Y+ ITLFTVSHRKSLWK+H Y+L FDG G YEFK + + E FGS
Sbjct: 7 SRVATGTASISGLIAISIAIRNHGQKAANAAFRQDSQFMTKKMGSKQKVAVNKEFYERFLKLFKVIVPGPFTPEVAFAALVAALLAARTSFDILVLQIFTSIERSIISRSQKDFVHHLRRFFVLMLPMSCVNCLLKYGHTELTLRFRNRLTKHLYKHYLKGFIYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNLSKPVLDIVLYSVKLTSSIGAQGPAIMLAYLVLSGTFLTWLRQPTGRFTIAEQKMEGNFRFMNSRLITHSEEIAFYNGNVREKRILDESFSRLIDLVRKSQQFRFSVSVIDNIVAKYLATVVGFLVVSRPFMDLSEPRLLNLTYAERMEDYFRSGKMLIKLSEAMGRLVLSGRELTRLAGFTARVTEMMDVLTDLDSGRYQRTMVKSEDDDVDDDSK------------------------------------------------------------GKTTSAEGL----------------------GLHPNKGQLL----------------------------------------------------------------------------------HKDHVIQFEDVPLVTPNGDVLVRSLNIKVDSGMNVVVAGPNGCGKSSLFRILGELWPLFGGKLTKPERNGLFYIPQRPYLTLGSLRDQIIYPHSHEDMKASGLKDEDLEYFLEKVQLGYLVSREGGWDVVHDWADVLSGGEKQRVAMARLFYHKPQFAILDECTSAVSVDVEGAMYNHCREQNITLFTVSHRKSLWKYHEYVLHFDGRGNYEFKKIDEAD--EAFGS 665
BLAST of mRNA_C-linearis_contig112.1521.1 vs. uniprot
Match: H3GA94_PHYRM (Uncharacterized protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3GA94_PHYRM) HSP 1 Score: 600 bits (1548), Expect = 2.910e-200 Identity = 335/781 (42.89%), Postives = 458/781 (58.64%), Query Frame = 2
Query: 245 STSRPKVDAAFLRRISRLLKVMVPGPFSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVARNKSGFKGGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMKGFNFYAVSNLDDRIANADQAITQDIERFADSVAELYSNITKPVLDMLVYVRRLSDKVDAAAPATMIAYLLLSGVALGALRKPTGMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLQGVFDKLVCVTRRSERFRHSLGALDSVVAKYFATIVGWTVVSRPFVNRDHPRHADSTPAEVYQDYHSSGRMMLNLSAALGRLVLSGRELARLSGFSSRVTGLIDVIDDVNRGVYKRGQEPSTTDPATAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADMAQARITPLTHRNAGVAGVNLAAEHSPSSILTRTTAPAARSSPGHDPSGLHPVTAESFVAPGRLDIGALPSEVRGQPELAPEGSAGSATXXXXXXXXXXAPAEGVGENGAGLAGGEGRGAXXXXXXXXXXXXXXXXXXXXXXXXVIEFTDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLLKPPGSRLFYVPQRPYLALGTLRDQVIYPHTRQEAATRGMTDGDLLSVLESVRLGYLLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGEIYSLAARSGITLFTVSHRKSLWKHHSYLLRFDGLGGYEFKPMSDIGVAEQFGS 2587
S + V+ F RR RL KV++PGPF+ E G VA +L+ARTS D+V+L+ T IERAI++R+++ F + RF + +P++ VNSLLKY +ELSLRFR RLT H+ +Y+KGF +Y VSNLD+RI+NADQ +T D+ERF++SVA+LYSN++KP+LD+ +Y +LS + P M++YL+ SG L LR+PT +T Q EG +R++NSRL+T+++EIAFY GN +EK++L F +L+ + R S++FR S+ +D++VAKY AT+VG++V+S+PF++ + R +T AE +DY SG+M+L +S A+GRLVLSGREL RL+GF++RVT +IDV+ D+++G Y+R L AE S ++ + +A S GL+P E VI F DVPLVTP G+VL+ +L+ KV++GMNV+VAGPNG GKSSLFR+LG LWP+ GG L KP + LFY+PQRPYL LG+LRDQ+IYPH+ ++ G+TD DL+ LE V+LG+L++REGGWD V DW+DVLSGGEKQR+A++RLFYH+PQFAILDECTSAVSVDVEGE+YS ITLFTVSHRKSLW +H Y+LRFDG G YEFK + + E FGS
Sbjct: 7 SRQKVAVNKEFYRRFLRLFKVIIPGPFTAEVGFAALVAVMLVARTSFDIVVLHTFTAIERAIISRSQTEFLRHLRRFVAIMLPMSCVNSLLKYGHTELSLRFRTRLTRHLYEQYVKGFVYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNMSKPILDIAIYAVKLSSTIGVEGPVIMLSYLVASGFFLTWLRQPTSRFTIAEQQMEGNFRFMNSRLITHSEEIAFYNGNVREKRILDQSFSRLIDLVRSSQQFRFSMSVIDNIVAKYLATVVGYSVLSKPFLDMSNKRLEHTTYAERMEDYFRSGKMLLKMSEAMGRLVLSGRELTRLAGFTARVTEMIDVLSDLDQGKYQRTM----------------------------------------------------------------------------LKAEEEDLSEESKAQSTSAESL------GLYPNKGEISYR----------------------------------------------------------------------------------DHVIHFEDVPLVTPNGDVLVPSLNIKVKSGMNVVVAGPNGCGKSSLFRILGELWPMFGGRLTKPERNGLFYIPQRPYLTLGSLRDQIIYPHSLKDMQASGLTDDDLVHYLEKVQLGHLVEREGGWDVVHDWADVLSGGEKQRVAMARLFYHKPQFAILDECTSAVSVDVEGEMYSFCREQNITLFTVSHRKSLWTYHEYVLRFDGRGHYEFKKIDEAD--EAFGS 621
BLAST of mRNA_C-linearis_contig112.1521.1 vs. uniprot
Match: A0A2T7NQZ6_POMCA (Uncharacterized protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NQZ6_POMCA) HSP 1 Score: 596 bits (1536), Expect = 6.780e-198 Identity = 336/775 (43.35%), Postives = 443/775 (57.16%), Query Frame = 2
Query: 263 VDAAFLRRISRLLKVMVPGPFSLEAGCLVAVAGLLLARTSLDVVMLNLTTTIERAIVARNKSGFKGGMSRFARLCVPVAVVNSLLKYFQSELSLRFRQRLTEHVMSKYMKGFNFYAVSNLDDRIANADQAITQDIERFADSVAELYSNITKPVLDMLVYVRRLSDKVDAAAPATMIAYLLLSGVALGALRKPTGMYTALVAQQEGEYRYVNSRLLTNAQEIAFYKGNAKEKQVLQGVFDKLVCVTRRSERFRHSLGALDSVVAKYFATIVGWTVVSRPFVNRDHPRHADSTPAEVYQDYHSSGRMMLNLSAALGRLVLSGRELARLSGFSSRVTGLIDVIDDVNRGVYKRGQEPSTTDPATAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADMAQARITPLTHRNAGVAGVNLAAEHSPSSILTRTTAPAARSSPGHDPSGLHPVTAESFVAPGRLDIGALPSEVRGQPELAPEGSAGSATXXXXXXXXXXAPAEGVGENGAGLAGGEGRGAXXXXXXXXXXXXXXXXXXXXXXXXVIEFTDVPLVTPTGEVLIEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLLKPPGSRLFYVPQRPYLALGTLRDQVIYPHTRQEAATRGMTDGDLLSVLESVRLGYLLDREGGWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGEIYSLAARSGITLFTVSHRKSLWKHHSYLLRFDGLGGYEFKPMSDIGVAEQFGS 2587
VDA F+RR+ +LK++VPG F++E L VA L+ART DV M+ T IE AI+ R+ + FK + +F ++VVN++LKY SEL LRFR RL++H+ SKY++GF FY +SNLD+RIANADQ +TQD+ERF DSVAELYSN++KP+LD+ +Y +L+ + A PA M+ YL SG L LR+P G T + EGEYRYVNSRL+TN +EIAFY+G +E++ + F+KLV R FR +G LD+++AKY AT+VG+ VVSRPF+N HPRH ST +E+ +DY+ SGRM++ ++ A+GR+VL+GRE+ RL+GF++RVT LI V+DD+N G+Y+R +T + + V L PG+ G++ + +I F VPLVTP G+VLI+ LSF+V+AGMNVLV GPNG GKSSLFR+LG LWPL GGTL KP +LFY+PQRPY+ +GTLRDQVIYP + +E RG+ D L +L V+L Y+L REGGW++V+DW DVLSGGEKQR+A++RLFYHRPQFAILDECTSAVSVDVEG +Y + GITLFTVSHRKSLW HH Y L+ DG G YEFKP++ +FGS
Sbjct: 60 VDALFIRRLKAILKILVPGWFTMETWYLALVAMSLIARTYADVWMIQNGTAIESAIIGRDVALFKTHLFKFIYAMPAISVVNNMLKYGLSELKLRFRTRLSQHLYSKYLRGFTFYKMSNLDNRIANADQLLTQDVERFCDSVAELYSNLSKPILDVFLYTVKLTGAIGAQGPAYMLLYLAFSGAVLTRLRRPIGRMTVTEQKLEGEYRYVNSRLITNCEEIAFYQGQKREQRTIIATFNKLVNHLRTFIFFRMQMGFLDNIIAKYIATVVGYLVVSRPFLNLAHPRHKTSTHSELLEDYYKSGRMLVKMAEAIGRIVLAGREMTRLAGFTARVTELIKVLDDMNSGLYER-------------------------------------------------------------TMVTANVQKGGEKSSVQL--------------------KPGN----------------GKIIV---------------------------------------------------------------------------KDHIIRFDRVPLVTPNGDVLIQELSFEVKAGMNVLVCGPNGCGKSSLFRILGELWPLFGGTLTKPEKGKLFYIPQRPYMTVGTLRDQVIYPDSHEEQIQRGVKDEALAEILNKVQLEYILQREGGWESVQDWMDVLSGGEKQRIAMARLFYHRPQFAILDECTSAVSVDVEGFMYEYSREVGITLFTVSHRKSLWTHHEYYLKMDGRGNYEFKPITSD--TSEFGS 660 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig112.1521.1 >prot_C-linearis_contig112.1521.1 ID=prot_C-linearis_contig112.1521.1|Name=mRNA_C-linearis_contig112.1521.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=836bp MMRQPAALAAPSQLRSNTFSGSTLLLTLALIKHFSKPESGACPKDGGSRGback to top mRNA from alignment at C-linearis_contig112:177101..184803+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig112.1521.1 ID=mRNA_C-linearis_contig112.1521.1|Name=mRNA_C-linearis_contig112.1521.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7703bp|location=Sequence derived from alignment at C-linearis_contig112:177101..184803+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig112:177101..184803+ >mRNA_C-linearis_contig112.1521.1 ID=mRNA_C-linearis_contig112.1521.1|Name=mRNA_C-linearis_contig112.1521.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5016bp|location=Sequence derived from alignment at C-linearis_contig112:177101..184803+ (Chordaria linearis ClinC8C monoicous)back to top |