mRNA_C-linearis_contig112.1516.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig112.1516.1 vs. uniprot
Match: A0A6H5K5X9_9PHAE (Uroporphyrinogen decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5X9_9PHAE) HSP 1 Score: 706 bits (1822), Expect = 3.270e-254 Identity = 368/431 (85.38%), Postives = 387/431 (89.79%), Query Frame = 3
Query: 18 MVFSTTSVAYVAVLLALDAFRPEAFVPSSVPAASLAKRSTAVTGWSTPATS--------CYRSRKAG-RRSRPSMSTGDEHDILLRVAKGEKADRAPVWLMRQAGRYMSAFRKFSDKYPFRHRSETPEIAIELSLQPWKTFGVDGVIMFSDILTPLPSMGVEFDVVKGTGPVIQSPIRTKGDVEGVRVMEDIGGKLPFVGETLKALRSETEGKTTLIGFVGAPWTLAAYSIEGGSSKYALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKKRHPEVSVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPASGIKEAVRSCVKDAGPSGHILNLGHGVLQTTPESAVAALVDAAKEATYESVLDREPA 1283
MV++ S+AYVA+LL L RPEAFV S+ AASLAK S T WS+ C R R AG RSRP MS+ DEHDILLRVAKGEKA+RAPVWLMRQAGRYMSAFRK+SD YPFRHRSETPEIAIELSLQPW+TFGVDGVIMFSDILTPLPSMGV+FDVVKGTGPVI +PIRTK DVE VRVMEDI GKLPFVGETLKALRSETEGK+TLIGFVGAPWTLAAYSIEGGSSK+ALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILK+RHP+V VIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLG SVPVSGNVDPLVLLGP SGIKEAVRSCV+DAG SGHILNLGHGVLQTTPES+VAALVD+AKEATY SVLDRE A
Sbjct: 1 MVYAKASIAYVAILLGLGVSRPEAFVLSTAGAASLAKDSRRATAWSSARAGAAAAGLEHCKRRRGAGCGRSRPCMSSSDEHDILLRVAKGEKAERAPVWLMRQAGRYMSAFRKYSDSYPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVMEDIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGASVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAKEATYASVLDREEA 431
BLAST of mRNA_C-linearis_contig112.1516.1 vs. uniprot
Match: A0A7S2UYW2_9STRA (Uroporphyrinogen decarboxylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYW2_9STRA) HSP 1 Score: 493 bits (1268), Expect = 1.750e-170 Identity = 239/345 (69.28%), Postives = 279/345 (80.87%), Query Frame = 3
Query: 210 SMSTGDEHDILLRVAKGEKADRAPVWLMRQAGRYMSAFRKFSDKYPFRHRSETPEIAIELSLQPWKTFGVDGVIMFSDILTPLPSMGVEFDVVKGTGPVIQSPIRTKGDVEGVRVMEDIGGKLPFVGETLKALRSETEGKTTLIGFVGAPWTLAAYSIEGGSSKYALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKKRHPEVSVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPASGIKEAVRSCVKDAGPSGHILNLGHGVLQTTPESAVAALVDAAK 1244
S++ +HDILLRVA+GE A+R PVWLMRQAGRYM AFR++SDKYPFR RSETPEIA+ELSLQPWK FGVDGVIMFSDILTPLPS+GVEFDV+KG GPVI +P+RT D+E + + D KL FVGETL+AL+ E EGKTTL+GF+GAPWT+AAYS EGGSSK + TKKMMME P LF LM LA ++ DYACYQVENGAQV+Q+FESWAHQ+ P+ F TFAKPYADL M ++K+R+P+V VIYFANGGSSYLE Q D ADMI +D V+M AR+RLG P+SGNVDPLVLLGP GI +AV C+K G SGHILNLGHGV+Q TPE AV V+ AK
Sbjct: 49 SVNIATDHDILLRVARGEDAERTPVWLMRQAGRYMKAFREYSDKYPFRVRSETPEIAVELSLQPWKAFGVDGVIMFSDILTPLPSLGVEFDVIKGHGPVISNPLRTAADIEQMTPLGDPSDKLGFVGETLQALKKEVEGKTTLVGFIGAPWTMAAYSCEGGSSKNCMITKKMMMEQPQLFDRLMNHLAVNLADYACYQVENGAQVLQIFESWAHQLSPAFFSTFAKPYADLTMKLIKERYPDVPVIYFANGGSSYLERQSDMNADMICVDWAVDMAQARQRLGKDKPISGNVDPLVLLGPKEGIVQAVTDCIKGGGGSGHILNLGHGVVQQTPEEAVGLFVETAK 393
BLAST of mRNA_C-linearis_contig112.1516.1 vs. uniprot
Match: A0A836CKK7_9STRA (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKK7_9STRA) HSP 1 Score: 458 bits (1179), Expect = 6.450e-157 Identity = 243/403 (60.30%), Postives = 292/403 (72.46%), Query Frame = 3
Query: 87 AFVPSSVPAASLAKRSTAVTGWS--TPATSCYRSRKAGRRSRPSMSTGDEHDILLRVAKGEKADRAPVWLMRQAGRYMSAFRKFSDKYPFRHRSETPEIAIELSLQPWKTFGVDGVIMFSDILTPLPSMGVEFDVVKGTGPVIQSPIRTKGDVEGVRVME---DIGGKLPFVGETLKALRSETEGKTTLIGFVGAPWTLAAYSIEGGS---SKYALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKKRHPEVSVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPASGIKEAVRSCVKDAGPSGHILNLGHGVLQTTPESAVAALVDAAKEATY-ESVL 1268
A VP+ V ASL+ + A S TPA A R +M+ +HDILLRVA+GE+A R PVWLMRQAGRYM FR +SDKY FRHRSETPEIAIELSLQPW+ FGVDGVIMFSDILTP P+MGVEFD+VKG GP SP+RT D+ ++++ DI LPFVG+TL+ALR ETEG TL+GFVGAPWTL AY++EG + + A H + MM DP LF MTKLA S+G+YACYQ E GAQVIQ FESWAH+M + FE + +PYA+++M+++++RHP V VIYFANGGS+YLES R + +MI LDQ V + AR RLG VPVSGNVDP VLL I+ AV+ CV AGP GHILNLGHGV+Q TPE+AVAA VDAAK+ Y ES L
Sbjct: 5 AVVPACVAVASLSAPAAAFAPQSSFTPAVGATHRHAAARGM--TMAANADHDILLRVARGEQAHRPPVWLMRQAGRYMKDFRAYSDKYAFRHRSETPEIAIELSLQPWRAFGVDGVIMFSDILTPFPAMGVEFDIVKGKGPAFASPVRTAADIAAMKILGEQVDIDAALPFVGQTLRALRKETEGGATLLGFVGAPWTLGAYAMEGSAPAEAGRAPHMRAMMDADPRLFGEYMTKLAVSVGEYACYQAEQGAQVIQFFESWAHRMTVADFEKWGRPYAEMSMNMVRERHPGVPVIYFANGGSAYLESMRGMKCNMIGLDQHVLIDDARRRLGADVPVSGNVDPDVLLESEDAIRAAVQDCVARAGPRGHILNLGHGVMQQTPEAAVAAFVDAAKQTRYAESAL 405
BLAST of mRNA_C-linearis_contig112.1516.1 vs. uniprot
Match: A0A6T5PC14_HETAK (Uroporphyrinogen decarboxylase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5PC14_HETAK) HSP 1 Score: 456 bits (1173), Expect = 4.110e-156 Identity = 224/349 (64.18%), Postives = 273/349 (78.22%), Query Frame = 3
Query: 213 MSTGDEHDILLRVAKGEKADRAPVWLMRQAGRYMSAFRKFSDKYPFRHRSETPEIAIELSLQPWKTFGVDGVIMFSDILTPLPSMGVEFDVVKGTGPVIQSPIRTKGDVEGVRVM---EDIGGKLPFVGETLKALRSETEGKTTLIGFVGAPWTLAAYSIEGGSSKYALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKKRHPEVSVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPASGIKEAVRSCVKDAGPSG--HILNLGHGVLQTTPESAVAALVDAAK 1244
M+ EHDIL+R A+GEK +R PVWLMRQAGRYM+ FRK+SDK PFR RSETPEIA ELSLQ W+ +G+DGVIMFSDILTPLP G+E+DVVKG GP I+ PIRTK VE + + +I L FVGETL+ LR+ETEGKT+L+GF+GAPWTLAAY+ EGGSSK+ + K+MMM++P LFH+ + KLA +G+YACYQ+ENGAQVIQVFESWAHQ+ P FE FAKPYA M +K +HP+V VIYFANGGSSYLE Q+D ++DM+ +D V+M AR LG P+SGN+DP+VLLG + I+ AVR CV AG G H+LNLGHGV+Q TPE+AVA LVDAAK
Sbjct: 42 MAVDPEHDILVRAARGEKTERTPVWLMRQAGRYMADFRKYSDKLPFRERSETPEIATELSLQCWRAYGMDGVIMFSDILTPLPGFGIEWDVVKGKGPQIKDPIRTKAQVEALTSLGGSAEIEATLGFVGETLRNLRAETEGKTSLLGFIGAPWTLAAYATEGGSSKHCMVIKQMMMKEPELFHTYLGKLAEDMGNYACYQIENGAQVIQVFESWAHQLSPFFFEHFAKPYAQKTMETIKAKHPDVPVIYFANGGSSYLELQKDMKSDMLCVDWAVDMAQARRTLGPDAPISGNIDPMVLLGTEADIRRAVRDCVAGAGGPGNRHVLNLGHGVVQQTPEAAVATLVDAAK 390
BLAST of mRNA_C-linearis_contig112.1516.1 vs. uniprot
Match: A0A7S0N122_9CRYP (Uroporphyrinogen decarboxylase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N122_9CRYP) HSP 1 Score: 454 bits (1168), Expect = 5.990e-155 Identity = 220/343 (64.14%), Postives = 271/343 (79.01%), Query Frame = 3
Query: 228 EHDILLRVAKGEKADRAPVWLMRQAGRYMSAFRKFSDKYPFRHRSETPEIAIELSLQPWKTFGVDGVIMFSDILTPLPSMGVEFDVVKGTGPVIQSPIRTKGDVEGVRVMEDIGGKLPFVGETLKALRSETEGKTTLIGFVGAPWTLAAYSIEGGSSKYALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKKRHPEVSVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPASGIKEAVRSCVKDAGPSGHILNLGHGVLQTTPESAVAALVDAAKEATY 1256
EHD+LLRVA+GEK +R PVWLMRQAGRYM AF+++SDKYPFR RSETP+IAIELSLQP+K FG DGVIMFSDILTPLPSMG+EFDVVKG+GPVI PIR+ V ++ ++D PF+ L +LR ETEGKTTL+GFVG+P+TLAAY+IEG ++K TKKMM +PAL HS+++ +A+SIG YAC+QV++GAQV+Q+FESWAH + P F FAKPYAD + +K +HP V +IYFANGGSSYLE QRD +ADMI +D V+M AR LG VP+SGNVDPLVL+GP I+E+VR C++ G GHILNLGHGV++ TPE+AVAA VD AK Y
Sbjct: 81 EHDLLLRVARGEKGERTPVWLMRQAGRYMKAFKEYSDKYPFRVRSETPDIAIELSLQPFKAFGTDGVIMFSDILTPLPSMGIEFDVVKGSGPVIFDPIRSAVQVSKLKKIDDPDKTTPFLRTILSSLRKETEGKTTLLGFVGSPFTLAAYAIEGKANKNCYQTKKMMYNNPALLHSILSHIADSIGVYACHQVDSGAQVLQLFESWAHHLGPDDFSVFAKPYADRVAAAIKAKHPTVPIIYFANGGSSYLERQRDMKADMIGVDWAVDMAEARRILGPGVPISGNVDPLVLMGPEEKIRESVRDCIRKGGGQGHILNLGHGVIEPTPEAAVAAFVDEAKRFRY 423
BLAST of mRNA_C-linearis_contig112.1516.1 vs. uniprot
Match: W7UA58_9STRA (Uroporphyrinogen decarboxylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA58_9STRA) HSP 1 Score: 454 bits (1168), Expect = 1.000e-154 Identity = 230/362 (63.54%), Postives = 277/362 (76.52%), Query Frame = 3
Query: 228 EHDILLRVAKGEKADRAPVWLMRQAGRYMSAFRKFSDKYPFRHRSETPEIAIELSLQPWKTFGVDGVIMFSDILTPLPSMGVEFDVVKGTGPVIQSPIRTKGDVEGVRVMEDIGGKLPFVGETLKALRSETEGKTTLIGFVGAPWTLAAYSIEGGSSKYALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKKRHPEVSVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPASGIKEAVRSCVKDAGPSGHILNLGHGVLQTTPESAVAALVDAAKE-----ATYESVLDREPAAV*VR 1298
+HDILLRVA+GE+ R PVWLMRQAGRYM+AFR++S+KYPFR RSETP +AIELS+QP + FGVDGVIMFSDILTPLP++G+EFDV+ G GPVI + I T DV+ VR ++D LPFVGETL+ L++E G+ TL+GFVGAP+TLAAY+IEGGSSK L TK+MMM DP L H + KLA +IGDYACYQ+ENGA+VIQVFESWAHQ+ PSQF ++KPYAD +I+K+RHPEV +I+F +G SS+LE Q D ADMI LD V+M +AR LG PVSGNVDP VLLGP GI AV CV+ AG GHILNLGHGV++TTPE AV VD AK A+ ES D P + VR
Sbjct: 74 DHDILLRVARGEQTHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPSMAIELSMQPLEAFGVDGVIMFSDILTPLPALGIEFDVISGKGPVIPNRIATAMDVDNVRRLDDPASSLPFVGETLRTLKNEVAGRATLLGFVGAPFTLAAYTIEGGSSKNCLKTKRMMMYDPTLLHVYLDKLATAIGDYACYQIENGAEVIQVFESWAHQLSPSQFLKYSKPYADKVTTIVKERHPEVPIIFFGHGASSFLELQGDMAADMICLDWQVDMATARRTLGAK-PVSGNVDPTVLLGPPEGIVAAVDECVRKAGGGGHILNLGHGVIKTTPEDAVRLFVDTAKSIELKAASRESGSDGPPPSSLVR 434
BLAST of mRNA_C-linearis_contig112.1516.1 vs. uniprot
Match: L1K3R9_GUITC (Uroporphyrinogen decarboxylase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1K3R9_GUITC) HSP 1 Score: 449 bits (1154), Expect = 1.400e-153 Identity = 222/368 (60.33%), Postives = 279/368 (75.82%), Query Frame = 3
Query: 186 KAGRRSRPSMSTGDEHDILLRVAKGEKADRAPVWLMRQAGRYMSAFRKFSDKYPFRHRSETPEIAIELSLQPWKTFGVDGVIMFSDILTPLPSMGVEFDVVKGTGPVIQSPIRTKGDVEGVRVMEDIGGKLPFVGETLKALRSETEGKTTLIGFVGAPWTLAAYSIEGGSSKYALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKKRHPEVSVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPASGIKEAVRSCVKDAGPSGHILNLGHGVLQTTPESAVAALVDAAKEATYESVLDREPAAV 1289
KA R +HDILLRVA+GE+A+RAPVWLMRQAGRYM AFR++SDKYPFR RSETPEIAIELSLQPWK FG DGVIMFSDILTPLPSMG+EFDVVKG+GPVI PIR+ ++ ++ ++D +PF+ E L++LR ET+GKTTL+GFVG+P+TLAAYS+EG + K TKKMM P + H+ + +A +I YA +Q++ GAQV+QVFESWAH + P F F KPYAD A+S++K++HP V +IYFANGGSSYLE QRD +ADMI +D ++M +AR+ LG P+SGNVDPL+L+G S I+EAVR CV A HILNLGHGV+Q TPESAVAA VD AK+ + +EP ++
Sbjct: 13 KASRAGLKLKMQASDHDILLRVARGEEANRAPVWLMRQAGRYMKAFREYSDKYPFRQRSETPEIAIELSLQPWKAFGTDGVIMFSDILTPLPSMGIEFDVVKGSGPVIFDPIRSMDQIKSLKPIDDPDASVPFLREILQSLRKETDGKTTLLGFVGSPFTLAAYSVEGKADKNCFQTKKMMYNQPEILHAFLDHIAENIAAYAIHQIDCGAQVLQVFESWAHHLSPEDFLIFGKPYADKAISLIKQKHPNVPIIYFANGGSSYLELQRDMKADMICVDWKIDMATARKTLGDK-PISGNVDPLILMGKESKIREAVRDCVHKARGVPHILNLGHGVIQPTPESAVAAFVDEAKKINFAQT--KEPVSI 377
BLAST of mRNA_C-linearis_contig112.1516.1 vs. uniprot
Match: A0A7S2FRM6_9EUKA (Uroporphyrinogen decarboxylase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FRM6_9EUKA) HSP 1 Score: 447 bits (1150), Expect = 1.500e-152 Identity = 219/350 (62.57%), Postives = 274/350 (78.29%), Query Frame = 3
Query: 198 RSRPSMSTGDEHDILLRVAKGEKADRAPVWLMRQAGRYMSAFRKFSDKYPFRHRSETPEIAIELSLQPWKTFGVDGVIMFSDILTPLPSMGVEFDVVKGTGPVIQSPIRTKGDVEGVRVMEDIGGKLPFVGETLKALRSETEGKTTLIGFVGAPWTLAAYSIEGGSSKYALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKKRHPEVSVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPASGIKEAVRSCVKDAGPSG-HILNLGHGVLQTTPESAVAALVDAAK 1244
R+ P+ + D HDILLR A+GE DR PVWLMRQAGRYM AFR+FS FR RSETP+IA ELSLQPW+ +GVDGVIMFSDILTPLP++G+EFDVV+G+GPVI SP+RT DV + ++D KLPF+ E L LR ETEG++TL+GFVGAP+TL AY++EG ++++ +H+KKMMM +P + H+ + LA +IG+YACYQ+E+GAQ IQ FESWAH + P+QF TFAKPYAD AM+ +K RHP+V V+Y+ANGGSSYLE QRD AD+ISLD V+MR ARE LG V GNVDP VL G + I++AV + + +AG +G HILNLGHGVLQ TPE AVAA V+AAK
Sbjct: 54 RAAPNPAASDNHDILLRAARGEVVDRTPVWLMRQAGRYMGAFREFSTTIEFRQRSETPDIATELSLQPWRAYGVDGVIMFSDILTPLPALGIEFDVVRGSGPVISSPLRTLADVAAMTPLDDPEAKLPFIREILGNLRRETEGRSTLLGFVGAPFTLVAYAVEGQANRHCIHSKKMMMNNPEVLHAALDNLAVAIGEYACYQIESGAQAIQFFESWAHHLSPAQFATFAKPYADRAMAYVKARHPDVPVLYYANGGSSYLELQRDMAADVISLDWAVDMRVARETLGSGRLVQGNVDPTVLFGTEAQIRDAVHANIAEAGGTGKHILNLGHGVLQGTPEEAVAAFVNAAK 403
BLAST of mRNA_C-linearis_contig112.1516.1 vs. uniprot
Match: A0A7S2BY39_9STRA (Uroporphyrinogen decarboxylase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BY39_9STRA) HSP 1 Score: 446 bits (1147), Expect = 3.990e-152 Identity = 226/341 (66.28%), Postives = 266/341 (78.01%), Query Frame = 3
Query: 228 EHDILLRVAKGEKADRAPVWLMRQAGRYMSAFRKFSDKYPFRHRSETPEIAIELSLQPWKTFGVDGVIMFSDILTPLPSMGVEFDVVKGTGPVIQSPIRTKGDVEGVRVMEDIGGKLPFVGETLKALRSETEGKTTLIGFVGAPWTLAAYSIEGGSSKYALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKKRHPEVSVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPASGIKEAVRSCVKDAG-PSGHILNLGHGVLQTTPESAVAALVDAAKE 1247
+HD+LLRVA+GE +R PVWLMRQAGRYM FR +SDKYPFR RSETPE+A ELSLQ W+ FG+DGVIMFSDILTPLP+MG+EFD+VKG GPVI +P R+ V ++ +ED LPFVGETLK LRSETEG+ TLIGFVG+P+TLAAYS+ G + K + TKKMM P L H+L+ LA +IGDYACYQVE+GAQVIQ FESWAH + P+QF+ FAKPYA+ AMSILK +HP+V VIYFANGGSSYLE Q D D + LD V++ AR LG S PVSGNVDPLVLL P I+E VRS + AG P H+LNLGHGV+Q TPESAVAA VD AK+
Sbjct: 61 DHDLLLRVARGEDGERTPVWLMRQAGRYMKDFRAYSDKYPFRQRSETPEMATELSLQCWRAFGMDGVIMFSDILTPLPAMGIEFDMVKGKGPVISNPPRSPEAVAALKPLEDPATSLPFVGETLKNLRSETEGRATLIGFVGSPFTLAAYSVNGMADKSCIETKKMMFHAPELLHALLDHLATAIGDYACYQVEHGAQVIQYFESWAHHLTPAQFDVFAKPYANKAMSILKAKHPDVPVIYFANGGSSYLELQTDMACDNLCLDHHVDISVARTILG-SKPVSGNVDPLVLLAPEERIREEVRSNIMAAGGPGKHLLNLGHGVIQGTPESAVAAFVDEAKQ 400
BLAST of mRNA_C-linearis_contig112.1516.1 vs. uniprot
Match: A0A4D9CWJ7_9STRA (Uroporphyrinogen decarboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWJ7_9STRA) HSP 1 Score: 451 bits (1161), Expect = 1.150e-149 Identity = 223/339 (65.78%), Postives = 267/339 (78.76%), Query Frame = 3
Query: 228 EHDILLRVAKGEKADRAPVWLMRQAGRYMSAFRKFSDKYPFRHRSETPEIAIELSLQPWKTFGVDGVIMFSDILTPLPSMGVEFDVVKGTGPVIQSPIRTKGDVEGVRVMEDIGGKLPFVGETLKALRSETEGKTTLIGFVGAPWTLAAYSIEGGSSKYALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKKRHPEVSVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPASGIKEAVRSCVKDAGPSGHILNLGHGVLQTTPESAVAALVDAAK 1244
+HDILLRVA+GE+ R PVWLMRQAGRYM+AFR++S+KYPFR RSETP +AIELS+QP + FGVDGVIMFSDILTPLP++G+EFDV+ G GPVI + I T DV+ VR ++D LPFVGETL+ L+ E G+ TL+GFVGAP+TLAAY+IEGGSSK L TK+MMM DP L H + KLA +IGDYACYQ+ENGA+VIQVFESWAHQ+ PSQF ++KPYAD +I+K+RHPEV +I+F +G SS+LE Q D ADMI LD V+M +AR LG PVSGNVDP VLLGP GI AV CV+ AG GHILNLGHGV++TTPE AV VD AK
Sbjct: 365 DHDILLRVARGEQTHRTPVWLMRQAGRYMAAFREYSEKYPFRQRSETPSMAIELSMQPLEAFGVDGVIMFSDILTPLPALGIEFDVISGKGPVIPNRIATAMDVDNVRRLDDPARSLPFVGETLRTLKKEVAGRATLLGFVGAPFTLAAYTIEGGSSKNCLKTKRMMMYDPTLLHVYLDKLATAIGDYACYQIENGAEVIQVFESWAHQLSPSQFLKYSKPYADKVTAIVKERHPEVPIIFFGHGASSFLELQGDMAADMICLDWQVDMATARRTLGAK-PVSGNVDPTVLLGPPEGIVAAVDECVRKAGGGGHILNLGHGVIKTTPEDAVRLFVDTAK 702 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig112.1516.1 >prot_C-linearis_contig112.1516.1 ID=prot_C-linearis_contig112.1516.1|Name=mRNA_C-linearis_contig112.1516.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=425bp MVFSTTSVAYVAVLLALDAFRPEAFVPSSVPAASLAKRSTAVTGWSTPATback to top mRNA from alignment at C-linearis_contig112:147907..152317- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig112.1516.1 ID=mRNA_C-linearis_contig112.1516.1|Name=mRNA_C-linearis_contig112.1516.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4411bp|location=Sequence derived from alignment at C-linearis_contig112:147907..152317- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig112:147907..152317- >mRNA_C-linearis_contig112.1516.1 ID=mRNA_C-linearis_contig112.1516.1|Name=mRNA_C-linearis_contig112.1516.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2550bp|location=Sequence derived from alignment at C-linearis_contig112:147907..152317- (Chordaria linearis ClinC8C monoicous)back to top |