|
|
Homology
BLAST of mRNA_C-linearis_contig112.1515.1 vs. uniprot
Match: A0A6H5K1Z4_9PHAE (Pyridoxal 5'-phosphate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1Z4_9PHAE) HSP 1 Score: 571 bits (1471), Expect = 5.730e-196 Identity = 413/585 (70.60%), Postives = 434/585 (74.19%), Query Frame = 1
Query: 124 MSGLGLLVTASERAGSGNMDNSNTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEEEEGKG-----DLAAGRGDLEFCQR-KGLNFTTRAMDGAAAGGHLAMVKWLHEXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSEGYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSHSSN----KKSRVDANASAKPAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHGAKACPPMGMFGSPFGNFSPVNGIVLPGPA-AQAIVPKQAATGVISSXXXXXXXXXXXXXXXXXXXXXXXXGSQRLRSNMLRSPELTLATSGRLSTTDERQLKAVMEFRKAYSAKALEGSNIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVVCKVTEKESTEYFQSRPRGSQVGAWALHQSRPVESRGSLEANVKDVQVHAFSIRDVPRPPHFGGFRLRPDRIEFWKGRQTRIHDRIVYVIMDDKWIMQRLQP 1845
MSGLGLLVTASERAGS MD++ G XXXXXXXXXXXX E++ G DLAA RGDL+FC+R +GL FT RAMDGAAA GHL MV WLHEXXXXXXXXXXXXXXXXXXXXXXXXXX R+EG SD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSHSSN KKSRVD A A S XXX G K CPPMGMFGSPFGNFSPVNGIVLPG AQ I PKQ A G+I + GSQRLRSNMLRSPELTLATSGR+S DERQLKAVMEFRKAY A+ALEG+NIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQE SHNP+GALSFWWSEVQRAVRIEGV+ KVT++ESTEYF+SRPRGSQVGAWALHQSRPVESRGSLEANVKDVQ SI +VPRPPHFGGFRLRPDRIEFWKGRQTRIHDRIVYV++DDKWIMQRLQP
Sbjct: 1 MSGLGLLVTASERAGSSEMDSTCGGSGASPRGSKRPAQDTTMSSASETAAKGGGGIEVTAPEAKAXXXXXXXXXXXXXXEQQSNGASENGDLAARRGDLDFCKRNEGLEFTARAMDGAAAAGHLDMVVWLHEXXXXXXXXXXXXXXXXXXXXXXXXXXDTRTEGCSDAALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSHSSNSSSNKKSRVDPRPGAGAAVSSAAGSSPSTFTHGAHSQQMVPXXXP-------GTKPCPPMGMFGSPFGNFSPVNGIVLPGDTMAQKIAPKQTAAGMIPAPQAKPPASGAG-------------GSQRLRSNMLRSPELTLATSGRMSNKDERQLKAVMEFRKAYCAQALEGANIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQETSHNPFGALSFWWSEVQRAVRIEGVMTKVTDQESTEYFKSRPRGSQVGAWALHQSRPVESRGSLEANVKDVQDKFSSITEVPRPPHFGGFRLRPDRIEFWKGRQTRIHDRIVYVVVDDKWIMQRLQP 565
BLAST of mRNA_C-linearis_contig112.1515.1 vs. uniprot
Match: D7FQS6_ECTSI (Pyridoxal 5'-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS6_ECTSI) HSP 1 Score: 460 bits (1184), Expect = 7.830e-153 Identity = 339/448 (75.67%), Postives = 350/448 (78.12%), Query Frame = 1
Query: 376 GDLAAGRGDLEFCQR-KGLNFTTRAMDGAAAGGHLAMVKWLHEXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSEGYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSHSSNKK-----------SRVDANASAKPAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHGAKACPPMGMFGSPFGNFSPVNGIVLPGPA-AQAIVPKQAATGVISSXXXXXXXXXXXXXXXXXXXXXXXXGSQRLRSNMLRSPELTLATSGRLSTTDERQLKAVMEFRKAYSAKALEGSNIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVVCKVTEKESTEYFQSRPRGSQVGAWALHQSRPVESRGSLEANVKDVQ 1680
GDLAA RGDL+FC+R +GL FT +AMDGAAA GHL MV WLH XXXXXXXXXXXXXXXXXXXXXXXXXX R+EG S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSHSS+ SRVD A A S G K CPPMGMFGSPFGNFSPVNGIVLPG AQ IVPKQAA G+I + GSQRLRSNMLRSPELTLATSGRLS TDERQLKAVMEFRKAYSA+ALEGSNIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGV+ KVTEKESTEYF+SRPRGSQVGAWALHQSRPVESRGSLEANVKDVQ
Sbjct: 82 GDLAALRGDLDFCKRNEGLKFTAKAMDGAAAAGHLDMVVWLHXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRTEGCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSHSSSSXXXXXXXXXXXXSRVDPRPGAGTAMSSAEGSSPSTFTHGAHSQQMVPPPPP-------GTKPCPPMGMFGSPFGNFSPVNGIVLPGDTIAQKIVPKQAAAGIIPTPKAKPPASGAG-------------GSQRLRSNMLRSPELTLATSGRLSNTDERQLKAVMEFRKAYSAQALEGSNIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVTEKESTEYFKSRPRGSQVGAWALHQSRPVESRGSLEANVKDVQ 509
BLAST of mRNA_C-linearis_contig112.1515.1 vs. uniprot
Match: A0A482SL99_9ARCH (Pyridoxamine 5'-phosphate oxidase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SL99_9ARCH) HSP 1 Score: 240 bits (613), Expect = 1.240e-71 Identity = 120/231 (51.95%), Postives = 155/231 (67.10%), Query Frame = 1
Query: 1165 LATSGRLSTTDERQLKAVMEFRKAYSAKALEGSN--IPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVVCKVTEKESTEYFQSRPRGSQVGAWALHQSRPVESRGSLEANVKDVQVHAFSIRDVPRPPHFGGFRLRPDRIEFWKGRQTRIHDRIVYV--IMDDKWIMQRLQP 1845
L T + STT + + + + RK YS++ L N I PF LF W +A AR EP AMCLST +PSAR+V+L+GFD+RGFVWYTN+ESRK QE+ NP+ AL+FWW E++R+VRIEG V +V+ ES EYF SRPRGSQ+GAW +QSR +E+R LE + V VPRPPH+GGFRL P RIEFWKGR +R+HDR+V+ + W ++RLQP
Sbjct: 27 LGTLAKPSTTASAE-RPLADLRKEYSSRGLVEENVVISNGPFELFEAWLNDAVAARVIEPNAMCLSTC-VDNKPSARFVLLKGFDERGFVWYTNYESRKGQELVDNPHAALTFWWGELERSVRIEGKVERVSSAESDEYFNSRPRGSQIGAWTSNQSRAIENRAILEEQERIVAERFGKEGPVPRPPHWGGFRLIPHRIEFWKGRASRLHDRLVFERSCLSSAWALERLQP 255
BLAST of mRNA_C-linearis_contig112.1515.1 vs. uniprot
Match: A0A7S2XW57_9STRA (Pyridoxal 5'-phosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW57_9STRA) HSP 1 Score: 238 bits (606), Expect = 3.930e-70 Identity = 117/218 (53.67%), Postives = 157/218 (72.02%), Query Frame = 1
Query: 1210 KAVMEFRKAYSA-KALEGSNIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPT-GRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVVCKVTEKESTEYFQSRPRGSQVGAWALHQSRPVESRGSLEANVKDVQVHAF-SIRDVPRPPHFGGFRLRPDRIEFWKGRQTRIHDRIVYVIMDDK---WIMQRLQP 1845
K++ +FR+ YS + L+ S + P+ LF WF++A+ A+ EP AMCLST PT GRPS+RYV+L+GFD+RG+VWYTN+ESRK QE+S NP+ +L FWW ++ R+VRIEG V KV+ +ES EYF SRP GSQ+GA QSRPV+SR LEA +++ A + V RPPH+GGFRL DR+EFW GR +R+HDR+VY D + W ++RLQP
Sbjct: 72 KSLADFREEYSKDEGLDESMVSSTPYPLFQRWFDDAKNAKVVEPNAMCLSTTEPTNGRPSSRYVLLKGFDERGWVWYTNYESRKGQELSANPWASLVFWWGDLHRSVRIEGKVEKVSAEESDEYFYSRPVGSQLGAMVSTQSRPVQSRSELEAKFQELTEAAEKNPSSVVRPPHWGGFRLAADRVEFWHGRSSRLHDRLVYTRPDFESVTWSIERLQP 289
BLAST of mRNA_C-linearis_contig112.1515.1 vs. uniprot
Match: A0A0G4EI35_VITBC (Pyridoxal 5'-phosphate synthase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EI35_VITBC) HSP 1 Score: 236 bits (603), Expect = 5.980e-70 Identity = 114/237 (48.10%), Postives = 161/237 (67.93%), Query Frame = 1
Query: 1153 PELTLATSGRLSTTDERQLKAVMEFRKAYSAKALEGSNIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVVCKVTEKESTEYFQSRPRGSQVGAWALHQSRPVESRGSLEANVKDVQVHAFSIRDVPRPPHFGGFRLRPDRIEFWKGRQTRIHDRIVYVIMDDK------WIMQRLQP 1845
P + +G LS ER + RK YS K L+ +++P DP TLF WFE+A+ EP AMCLST GRPSAR+V+L+G+D+RGFV+YTN+ESRK +E++ NP+ +L+FWW ++R++RIEG V +V +ES YF SRP+ S++GA A QSRP+ SR +LEA +++ +VPRP H+GGFRL P RIEFWKGR++R+HDR+VY + + W ++R+QP
Sbjct: 39 PRFMSSANGLLSNNLER----ISALRKEYSMKGLDEASMPADPLTLFGEWFEDAKTVSV-EPNAMCLSTASKEGRPSARFVLLKGYDERGFVFYTNYESRKGKELTENPFASLTFWWEALERSIRIEGRVQQVPPEESDAYFTSRPKASRLGAIASDQSRPIASREALEAKWSELEGRYEGTAEVPRPLHWGGFRLVPSRIEFWKGRESRLHDRLVYTRGEGEGEGGGEWRIERMQP 270
BLAST of mRNA_C-linearis_contig112.1515.1 vs. uniprot
Match: A0A7S3CLY1_9SPIT (Pyridoxal 5'-phosphate synthase n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CLY1_9SPIT) HSP 1 Score: 230 bits (587), Expect = 2.900e-68 Identity = 106/215 (49.30%), Postives = 149/215 (69.30%), Query Frame = 1
Query: 1210 KAVMEFRKAYSAKALEGSNIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVVCKVTEKESTEYFQSRPRGSQVGAWALHQSRPVESRGSLEANVKDVQVHAFSIRDVPRPPHFGGFRLRPDRIEFWKGRQTRIHDRIVYV---IMDDKWIMQRLQP 1845
KA+ + RK YS++ L + +PF LF WF+EA A EP AMC+S+ G +PS+R+V+L+GFD+RGFV+YTN+ESRKSQ+++ NP A +FWW ++R +RIEG V KV+ ES +YF SR +GSQ+GAW QSRP+E+R LE +++ ++ V RPPH+GG+R+ P IEFWKGRQ+R+HDRIV+ + W +RLQP
Sbjct: 8 KAIQDLRKEYSSQQLNEEDAGANPFDLFKTWFDEAVKADVLEPNAMCVSSCGKDLKPSSRFVLLKGFDERGFVFYTNYESRKSQQLTENPNAAATFWWGALERQIRIEGQVEKVSSDESDQYFNSRGKGSQIGAWTSDQSRPIENRAELEKKEDELKKKYEAMEKVERPPHWGGWRIIPSYIEFWKGRQSRLHDRIVFEREEASQNLWSKKRLQP 222
BLAST of mRNA_C-linearis_contig112.1515.1 vs. uniprot
Match: UPI001CF91AEF (pyridoxamine 5'-phosphate oxidase n=1 Tax=Penaeicola halotolerans TaxID=2793196 RepID=UPI001CF91AEF) HSP 1 Score: 230 bits (586), Expect = 3.040e-68 Identity = 105/212 (49.53%), Postives = 147/212 (69.34%), Query Frame = 1
Query: 1210 KAVMEFRKAYSAKALEGSNIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVVCKVTEKESTEYFQSRPRGSQVGAWALHQSRPVESRGSLEANVKDVQVHAFSIRDVPRPPHFGGFRLRPDRIEFWKGRQTRIHDRIVYVIMDDKWIMQRLQP 1845
K + + RK Y+ LE + KDP + F WFE A + +EP AMCLST+ RPSAR V+L+G + + F++YTN++S+K +++ + P+ AL+F+W E++R VRIEG V KV+ S EYF SRP+GSQ+GAWA QS+ + SR LE+N+KD++ + R VPRPPH+GGF L PDRIEFW+GR +R+HDR+VY D W + RL P
Sbjct: 3 KPIADIRKEYTLATLELDQVAKDPISQFKAWFEAAIKSDVNEPNAMCLSTINSANRPSARIVLLKGVEDQKFIFYTNYDSQKGKDLINQPFAALTFFWPELERQVRIEGSVQKVSSLLSDEYFNSRPKGSQLGAWASPQSQKINSRSVLESNLKDLEKE-YQDRQVPRPPHWGGFELTPDRIEFWQGRASRLHDRVVYEKKADTWHINRLAP 213
BLAST of mRNA_C-linearis_contig112.1515.1 vs. uniprot
Match: A0A7V4YVT7_9BACT (Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V4YVT7_9BACT) HSP 1 Score: 229 bits (583), Expect = 1.060e-67 Identity = 108/210 (51.43%), Postives = 146/210 (69.52%), Query Frame = 1
Query: 1216 VMEFRKAYSAKALEGSNIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVVCKVTEKESTEYFQSRPRGSQVGAWALHQSRPVESRGSLEANVKDVQVHAFSIRDVPRPPHFGGFRLRPDRIEFWKGRQTRIHDRIVYVIMDDKWIMQRLQP 1845
+ R+ Y+ ++L S++ +P FA+WFEEA ++ EP AM L+T +GRPSAR V+L+GFDK+GFV+YTN+ESRK +E++ NP AL F W E++R +RIEG V KVT ES YFQSRP+GSQ+GAWA QSR +E R LE V +Q +P PP +GG+RLRPD IEFW+GR++R+HDRI Y D+ W ++RL P
Sbjct: 11 IASLRRNYALQSLSESDVLHEPIAQFALWFEEALSSQLPEPNAMTLATADLSGRPSARTVLLKGFDKQGFVFYTNYESRKGKELTENPQAALLFTWLELERQIRIEGKVEKVTRDESLAYFQSRPKGSQIGAWASPQSRVIEGRLVLEKQVASLQTQYAQDDKLPLPPFWGGYRLRPDCIEFWQGRESRLHDRICYKRSDNGWKIERLAP 220
BLAST of mRNA_C-linearis_contig112.1515.1 vs. uniprot
Match: A0A368JXQ7_9BACT (Pyridoxine/pyridoxamine 5'-phosphate oxidase n=3 Tax=Larkinella TaxID=332157 RepID=A0A368JXQ7_9BACT) HSP 1 Score: 227 bits (579), Expect = 3.260e-67 Identity = 101/213 (47.42%), Postives = 152/213 (71.36%), Query Frame = 1
Query: 1207 LKAVMEFRKAYSAKALEGSNIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVVCKVTEKESTEYFQSRPRGSQVGAWALHQSRPVESRGSLEANVKDVQVHAFSIRDVPRPPHFGGFRLRPDRIEFWKGRQTRIHDRIVYVIMDDKWIMQRLQP 1845
L + + RK Y+ L+ S++ K+PF F WF EA A EP AM L+TVG GRPS R V+L+GFD+ GF ++TN++SRK E++ +P+ +L+F+++E++R +RIEG + KV+ ++S YFQSRPRGSQ+GAW HQS +ESR LE ++++ F + +PRPPH+GG+ L PDRIEFW+GR +R+HDR++Y ++ W+++RL P
Sbjct: 2 LSPLADLRKEYTLNGLDPSDVTKNPFAQFQRWFTEALNAGVPEPNAMHLATVGSEGRPSGRIVLLKGFDENGFSFFTNYQSRKGSELTTHPFASLTFFYAELERQIRIEGAIQKVSAEDSDVYFQSRPRGSQIGAWVSHQSSAIESREVLENRQQELEQQ-FENQPIPRPPHWGGYLLVPDRIEFWQGRPSRLHDRVLYRKEEENWVIERLAP 213
BLAST of mRNA_C-linearis_contig112.1515.1 vs. uniprot
Match: A0A1Y0RV20_9CYAN (Pyridoxine/pyridoxamine 5'-phosphate oxidase n=2 Tax=Nostocales TaxID=1161 RepID=A0A1Y0RV20_9CYAN) HSP 1 Score: 227 bits (579), Expect = 3.370e-67 Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 1
Query: 1210 KAVMEFRKAYSAKALEGSNIPKDPFTLFAVWFEEARIARASEPGAMCLSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVVCKVTEKESTEYFQSRPRGSQVGAWALHQSRPVESRGSLEANVKDVQVHAFSIRDVPRPPHFGGFRLRPDRIEFWKGRQTRIHDRIVYVIMDD-KWIMQRLQP 1845
K + + RK Y+ + L ++ +PF F WF++A A+ EP AM L+T P G+PSAR V+L+GFD+RGFV+YTN+ S+K QE++ NP +L FWW+E++R VRI G V KV+E ES EYF SRP SQ+GAWA HQS +ESR LE ++++Q+ + +D+ RP H+GG R+ P +IEFW+GR R+HDR++Y + DD W + RL P
Sbjct: 3 KTIADLRKDYTLQGLSEKDVNSNPFIQFRQWFDQALAAQLPEPNAMTLATATPDGQPSARMVLLKGFDQRGFVFYTNYNSQKGQELAENPQASLVFWWAELERQVRICGRVEKVSENESDEYFYSRPLNSQLGAWASHQSEMIESRELLEKRMQELQIQ-YQNQDISRPRHWGGLRVIPTKIEFWQGRSNRLHDRLLYTLSDDGSWKIARLSP 214
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 463.4 |
| Seed ortholog evalue | 1.7e-127 |
| Seed eggNOG ortholog | 2880.D7FQS6 |
| Preferred name | PNPO |
| KEGG rclass | RC00048,RC00116 |
| KEGG ko | ko:K00275,ko:K08821 |
| KEGG Reaction | R00277,R00278,R01710,R01711 |
| KEGG Pathway | ko00750,ko01100,ko01120,ko05202,map00750,map01100,map01120,map05202 |
| KEGG Module | M00124 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000166,GO:0003674,GO:0003824,GO:0004733,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009743,GO:0009744,GO:0009987,GO:0010033,GO:0010181,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019842,GO:0030170,GO:0031974,GO:0031981,GO:0032553,GO:0034285,GO:0034641,GO:0036094,GO:0042221,GO:0042364,GO:0042802,GO:0042803,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046184,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0050896,GO:0051186,GO:0051188,GO:0055114,GO:0070013,GO:0070279,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901700 |
| EggNOG free text desc. | pyridoxamine-phosphate oxidase activity |
| EggNOG OGs | COG0259@1,KOG2586@2759 |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Ec32 ortholog | Ec-01_000340.1 |
| EC | 1.4.3.5,2.7.11.22 |
| COG Functional cat. | H |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01001 |
| Exons | 12 |
| Model size | 1850 |
| Cds size | 1848 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927487.4710774-CDS-C-linearis_contig112:134215..134359 | 1622927487.4710774-CDS-C-linearis_contig112:134215..134359 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 134216..134359 + |
| 1690879728.9833343-CDS-C-linearis_contig112:134215..134359 | 1690879728.9833343-CDS-C-linearis_contig112:134215..134359 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 134216..134359 + |
| 1622927487.4812458-CDS-C-linearis_contig112:134607..134886 | 1622927487.4812458-CDS-C-linearis_contig112:134607..134886 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 134608..134886 + |
| 1690879729.0018647-CDS-C-linearis_contig112:134607..134886 | 1690879729.0018647-CDS-C-linearis_contig112:134607..134886 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 134608..134886 + |
| 1622927487.4912586-CDS-C-linearis_contig112:139068..139215 | 1622927487.4912586-CDS-C-linearis_contig112:139068..139215 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 139069..139215 + |
| 1690879729.009973-CDS-C-linearis_contig112:139068..139215 | 1690879729.009973-CDS-C-linearis_contig112:139068..139215 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 139069..139215 + |
| 1622927487.5036745-CDS-C-linearis_contig112:139799..139958 | 1622927487.5036745-CDS-C-linearis_contig112:139799..139958 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 139800..139958 + |
| 1690879729.0181167-CDS-C-linearis_contig112:139799..139958 | 1690879729.0181167-CDS-C-linearis_contig112:139799..139958 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 139800..139958 + |
| 1622927487.514148-CDS-C-linearis_contig112:140627..140794 | 1622927487.514148-CDS-C-linearis_contig112:140627..140794 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 140628..140794 + |
| 1690879729.0306015-CDS-C-linearis_contig112:140627..140794 | 1690879729.0306015-CDS-C-linearis_contig112:140627..140794 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 140628..140794 + |
| 1622927487.5252528-CDS-C-linearis_contig112:141162..141286 | 1622927487.5252528-CDS-C-linearis_contig112:141162..141286 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 141163..141286 + |
| 1690879729.0398045-CDS-C-linearis_contig112:141162..141286 | 1690879729.0398045-CDS-C-linearis_contig112:141162..141286 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 141163..141286 + |
| 1622927487.5349617-CDS-C-linearis_contig112:141581..141748 | 1622927487.5349617-CDS-C-linearis_contig112:141581..141748 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 141582..141748 + |
| 1690879729.0581586-CDS-C-linearis_contig112:141581..141748 | 1690879729.0581586-CDS-C-linearis_contig112:141581..141748 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 141582..141748 + |
| 1622927487.5467718-CDS-C-linearis_contig112:141974..142062 | 1622927487.5467718-CDS-C-linearis_contig112:141974..142062 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 141975..142062 + |
| 1690879729.070439-CDS-C-linearis_contig112:141974..142062 | 1690879729.070439-CDS-C-linearis_contig112:141974..142062 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 141975..142062 + |
| 1622927487.5561922-CDS-C-linearis_contig112:142311..142440 | 1622927487.5561922-CDS-C-linearis_contig112:142311..142440 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 142312..142440 + |
| 1690879729.0794446-CDS-C-linearis_contig112:142311..142440 | 1690879729.0794446-CDS-C-linearis_contig112:142311..142440 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 142312..142440 + |
| 1622927487.5650926-CDS-C-linearis_contig112:142904..143048 | 1622927487.5650926-CDS-C-linearis_contig112:142904..143048 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 142905..143048 + |
| 1690879729.0886354-CDS-C-linearis_contig112:142904..143048 | 1690879729.0886354-CDS-C-linearis_contig112:142904..143048 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 142905..143048 + |
| 1622927487.5738847-CDS-C-linearis_contig112:143270..143413 | 1622927487.5738847-CDS-C-linearis_contig112:143270..143413 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 143271..143413 + |
| 1690879729.096388-CDS-C-linearis_contig112:143270..143413 | 1690879729.096388-CDS-C-linearis_contig112:143270..143413 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 143271..143413 + |
| 1622927487.5833416-CDS-C-linearis_contig112:143911..144068 | 1622927487.5833416-CDS-C-linearis_contig112:143911..144068 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 143912..144068 + |
| 1690879729.1052027-CDS-C-linearis_contig112:143911..144068 | 1690879729.1052027-CDS-C-linearis_contig112:143911..144068 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig112 143912..144068 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig112.1515.1 >prot_C-linearis_contig112.1515.1 ID=prot_C-linearis_contig112.1515.1|Name=mRNA_C-linearis_contig112.1515.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=616bp
SPRSLCVYSRSYEHAHLLIFIFHSRDREGRVRKGSQGFNASMSGLGLLVT
ASERAGSGNMDNSNTGGGGSPRGSKRRAEEPAVKITEQQAGGGGGESTAA
ASDKKDRGEEGTGGGKKDMEEEEGKGDLAAGRGDLEFCQRKGLNFTTRAM
DGAAAGGHLAMVKWLHEKGSGCTTAAVDSAAQEGHLEVVQWLHENRSEGY
SDAALAMAAGRGHMPTVEWFYGNSVPGDICKAIDEAQAGGHVEVVDWLKS
HSSNKKSRVDANASAKPAGSSAAAASSPSSFQRQPPSGGGGHPQQMVPPP
AHGAKACPPMGMFGSPFGNFSPVNGIVLPGPAAQAIVPKQAATGVISSSA
PSSSASSSSTKPSLSAGGGHGGGSQRLRSNMLRSPELTLATSGRLSTTDE
RQLKAVMEFRKAYSAKALEGSNIPKDPFTLFAVWFEEARIARASEPGAMC
LSTVGPTGRPSARYVMLQGFDKRGFVWYTNFESRKSQEMSHNPYGALSFW
WSEVQRAVRIEGVVCKVTEKESTEYFQSRPRGSQVGAWALHQSRPVESRG
SLEANVKDVQVHAFSIRDVPRPPHFGGFRLRPDRIEFWKGRQTRIHDRIV
YVIMDDKWIMQRLQP* back to topmRNA from alignment at C-linearis_contig112:134216..144068+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig112.1515.1 ID=mRNA_C-linearis_contig112.1515.1|Name=mRNA_C-linearis_contig112.1515.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9853bp|location=Sequence derived from alignment at C-linearis_contig112:134216..144068+ (Chordaria linearis ClinC8C monoicous)
TCGCCACGTTCTCTCTGTGTCTACTCCCGAAGTTACGAACACGCGCACCT
TCTCATCTTCATCTTTCATTCGAGGGACAGAGAAGGAAGGGTTAGGAAAG
GCTCACAAGGCTTCAACGCCTCCATGAGTGGACTCGGATTGCTGGTGAGA
CGAGAGGGGGCAGAGAGAAGAAGAGAAAGACACAAAATCCAACTGCGGGG
TGTGGTGGCCGGCCATGCTGGCCAGCGTGGGGTGCGGGGCCCAGGCCAGC
AAACACGCACGTATACGTTTTTTCGTTTTTTCTAGCCGTAAAACACAAAT
CAACCACAACCCTGGACGACATCAGATATTGAACCGAAAACTCGGATAAC
ATGCCCATCCCCCCTCTCTCTCGCTCTCTCTCTACGCTTCAGGTCACCGC
AAGTGAACGGGCTGGCAGCGGTAACATGGACAACAGCAACACCGGAGGCG
GTGGGTCGCCGAGAGGCAGCAAGCGCCGCGCGGAAGAGCCCGCCGTGAAG
ATAACAGAGCAGCAGGCCGGCGGCGGTGGGGGGGAGAGTACAGCAGCCGC
GTCTGACAAGAAGGACCGGGGAGAGGAAGGGACGGGAGGGGGCAAGAAGG
ACATGGAGGAGGAGGAGGGGAAGGGAGATCTGGCCGCCGGGCGTGGCGAT
TTGGAGTTCTGCCAGCGGAAGGTGGGAGATTTTTTTGCGTGTTTCACAGG
TTTTAATGTAATTTAGAAGACAACAACCAACAACAACAGGTATGTTTTTC
GTGGGATGTCGAGACGTTTGGGCATGGCCTATGTACGCACGGCACACGCG
TTGCTCAGGGTTTTCCCGAAAGAGAGACCATATAGCTTGGGCGCCGCGTG
GGGGGGGGCTGCTGTTTTCCGCTCTGTGTGACAAGACAATAAAACAGAAG
ACCAGTCGCCCCACTGCCGAACACCATGGGTGCTGTGTAATCCGACACAT
GATTTGCTGGCCGCTGAAAAAAAAAATGGCATACAAGTACAAGATATAAC
ATGAACCCTATTTCCAGTCCCATTTGATTTAACCCGCACCGACAGAAGAC
ACACGGCAGTTCGCCCTGGTCGCGTCGTGCGTCTTTTAGCCTTGCGGGTG
GGTGCTCACTCCCTACCTACGGGGGGAGGCATTGTTTCGCAAGCGTAGGC
CTGAAAGTTTAGGTCACCCAAGGTTCACCACAGGCAGCAGGAATTACGGA
ATTACCTGGCCGCTACAGCAGTAGTTCAACTACGCCTTACACACGACCTC
ATTGTTGACGAGGGTGGGGAGTGCTGAACCCTGCTCGCGATAAAAAGCAT
CAAAGGCATGCACCGCAGGAGGTAGGTGGAGACATCCCCTCCTGTGTGAC
CCCGGATGGTAGCCTAGCTGGCAGCTAGTTATAGTGAAGAGGAGGAGGCA
GGCTACGAAAAAACACAACAACATGTAGTTAATGGGCGAGAAAATAAATA
AATCGTATTCGCATTAATTTCCAGAGTTCGCAGCGGCGCCTTGCCACGCG
GGGCATCTTGCCAGAACATCTGAACCGTGATCACACAGAAGGCTCCTCTC
CCTGAGACCCCCACCCACCTTCTGCGGTGCTTGCCTGGTAATCTTTAGCG
CGAGATAATTTCAGCCGTCTCTCCATGGAGCCGTTTTTGATTTCAGCCAG
CGATCTCCGATTTCAGAAAAACGAGTTCGGTAGATACATAAAACCCCAAC
GTGGGTACCCCCTGTGTGACCCCGGATGGACGTCTCTCCATAGCTAGTTG
TAGGGTAGTACACCTAAACGTGTGTGCGCATCGAAGAGGAGAAGGCAGGC
TAAAGGCCATTGATGGGACGGGGAAAAAAGAAGAAAAAAAAAACATGCCG
CATTTTCGCACTTTTTTTTTTTGCGTCTGTCGAAGAGTTCGGAGCTCTCT
GGGGCTGTCTGGCGTTTCCTGCAAAGCTGCAAAGCACCGTTAGTTTGCAG
GAGGAGGGTGAAAACGGCGCCTATGCAGCAGTAAGGTCTCTCGCGGTCGC
CGCCTCTTTTTTGCTCCGCCATGCAATTCGTGTGTCGGTGTATTTTTATT
TCCCGACAGACGGATACAAGACACAACAACGCGGCTGATTTTTTTCTTGA
CTGCTTTAGTCTCTGAGTTTCAGTACAACAAGGTCACAGCAGTATCATAT
CATAGGTCCATCTTGTCATGCTTTTGCAGGGTGGTTCAGCGCAAGAATTC
CTCCGAAACCCACCGAAAACCCAATTTTTTGTGTTCAGTTTGTCTCTTTA
TTTCGATGTGTTTCCTCCCGGTCGCCTCTCTCTCCCTTGGGTCTGTCTCC
CACTCAACTGGGTACTTGGAAGTACTTGTAGAAGTAAAAGTAAAAGTCAA
CATATAGAGGGGATGGGATTAGCCCTCCGATAGGTTCAACAGGCTGCAAA
GTCTCTCTTCTTGGCTTTGTTGTGTAGAGAGACAAGGGGTGTGCGTGTGT
GGGCGAAACAGCCAGGGGTGCAATTGCACACGGCGGGTATCTTACCTGCT
GGATCATAACACTAGTTTCCTTCCCCATAGTATATAGACGCTCCACCTCT
ACAACAACCTCTTGCCTGACCGAGGGCACCCAAGCAACTTGCTGTTTGGC
CTCTCGGCACTCCGCTCACTCCCAGCCAACTTTGCCTTACGATCGATCCA
GCAGATGTCCATGCGTCCCGTCTCGGAAGTGTGAGGTTTAAAAGTTGAAG
CTTCCTTCAAACGTCAGAAGTTCAGCGCGATCAGTTCCTCCCCGGATTTT
TCTCGCGTTTTTCAACGCGCGGAAAGCTCCGCTACAGCAGTAAAATCCAG
TCTACCCTCGAAAGATGCCGTAAAATGAAATCCCACACATGGGAGGATGA
TACATTGCTCACTCCCTTCAGCCAAACGGAAGGAACCCTTTTGATTTGTT
TTTTGTTCGCGTATTTTAATTTTGTCGTTCACATTCATTCCGAAGAGTTC
GCAGGGGTGCCTTGCCACGCGGGGCATCTTGCCGGAACATCTGAACCGTG
GTTACACAGAAGGTTCCTCTCCCTGAGGCCTCCGCCCACCTCGTGCGGCG
AACCCTTGGACAACGGGTTTGCCCTTTTTGTCCTTTGTCTTTTGTCCCAA
GTGGAAGCGTGTGGTTGAGCTTTTTCATTTGTTCCCACGATCGTCCTACA
TGGTAGACTCACTTGCGACCTCTAGATACACTATGCACGTATGTATGTTA
ATACTTCGTATGTGCACGAAAATCTTGCGACAGGCAGCGTTAGCCGTTAC
GACCCTCGAAACAAGCACCGAAGATTAAGATTCCGTCACCGAAACTGCGG
ATTGCGAACTGCAAACTCTCATCTTCTCTCTCGTCTTCTTACTGCTAGTC
CTCTCAATCTTTATCTTCCAGCTGCGACCTGATCCGGCATTTTCATGAAT
ACCTGAAACCTGAAACTCCTATTTTGTATGGTATGGTTAGGGCTAGATAG
GGCCTCATTTGCGATTTCTCGTTCGTTGATGACCGGACCGCCTACGCACG
AAATTAAGAGTATCTACGAAATAGAACAAGGAGGGGGTACGCAGACCCTA
ACCCTAACCCCAAAGCACGGATTCAATACTTTATCCCATAAGTTTTCTGA
AGGAGAAAAAGCTGTGATGACCTGCTATTCTGGCGTTTTCAAGTACTGTT
TCTAAGACCCATCCTGTTGTCACACAAAACTGTTAGCCAGCGCAGAGTGC
TTCACACTCATTGCCGTGACCGCAGTGCGGGAGGCCTTTAAGACACAGCA
GTGTGTAGAAAACACCTATGGTATTGAACTTGGCTTTTGCTCTGCCCGTG
GTGTACAACAGGGCAGGGATTGCTGTTAGCTCAACAGGCAGCAGTTGTTG
CGCGGAAGGAAAACGATAACGATTTTTTTTTCCCCCACCCGCCGCACGAA
AATGAAGCTCATGTAGCTTGGCACGTTTAGGTTGTGCACGTCACGTAACC
AACTCCGACCGAGGCATGGCGTCAAAGATCACGTTGGTTAGTCTCAGCTT
GTGCGGCATGTCGAAAGTTTAAAGTTTCCCTCAGAGGAAAGTAGACAAAA
GTAGGCTATCGAGATATCTAGCTAGCTACCCGCCGTTTACGGGGCCAAAA
GCGCCCACAGCAAAGCAACGGCGGACAAAAGGCCAGTGCAGTGCTGGCAA
AAGTCTAAACGCATGTCAACTCTTCCAGCGTACATCCACACATCCATACC
TGGTCTATCTAGTGGATACCCACGCAGTCTAAGCGCCAGGTCATGGGTTC
GAGTCCCGACGAAGCGAGTTTTTTTTCTCACTTTCGTTCCTGGTACATTG
AAAAACTTGCTGCATAGCTTGTGAGTAAACACCTGGCACTACTTTCGACT
TCATTGTTGACGAGGGTAGGGAGTGCTGAACCCTGCTCGCGATAAAAAGC
ATCAAAGGCATGCACCGCAGGAGGTAGGTGGAGACATCCCCTCCTGTGTG
ACCCCGGATGGTAGCCTAGCTATAATAGTTGCAGTGAAGAGGAGGAGGCA
GGCTACAAACATTAATAGGCGAGAAAAAAAAAAACATACAAACGGTGCTT
TATGTGAGCAAAAGTAAACGTGCACGTAAAATAGCAGCGTCCGAGGCTTG
TCTGCGCACCTCTCCCAACCAACTGGAAAAGAACGTTCCCAGCAGCAGAG
AAAAATTAATCGGTGTACTGCTGTAGACGATACGTTCAAATAATAAATAT
ACTTGTACTTCGAAGTACTCCTATGTTTTTTTTTTTTTTTTTGGTTTTGA
GGCAGACGATATCAGTCCCCTCCCCGAGTTTTTGTCTCCCGCTGGTTCTC
ATCGATTCCTCTGATCCCCCCCCGCCCCCCACGTTAAATTAAAAACACAG
CAGGGCCTGAACTTCACGACAAGGGCGATGGACGGTGCCGCCGCGGGGGG
GCACCTGGCCATGGTGAAGTGGCTGCATGAGAAGGGTTCCGGGTGCACCA
CGGCCGCGGTGGACTCGGCAGCCCAGGAAGGACACCTGGAGGTCGTGCAG
GTACGGTCATAGGTCAGGCGGAGAGAGGGGTAGGGGTAGGGTTAGGGCTA
GAATTTGGGGGGTGAGGGACGGGGGCGGGGCGTACATGGTTGTAGGCCCC
CTGGAGGTGTAGAGAGTAAGGGTCAGGAGAGGGGGGAGTTGGGTCAATCA
CGAGACCCCTTCGCGATGGATGGATGCTGGGATGGATTGCCGTTTTTCGG
ACTCGCGTACTTGAGGATCCACCAACACCAACATACTCGTCGTCAAGGTT
TTGCTTCGCGCAGGTTGATTTCGCGCTTCCAAGCGCTGTTTGCCGGGGTA
TCGGCCGGTCGTCATCGCCTTTTTTCTTTTTTTTTCGCACCGGCTGTCCC
TTTTCTCCCCCCGTGGGCCGCTGCGCTGCGGCCGTCATCTTCTTGTGTCG
CTCAACGACAACACCCACAAAGCACGGCACTCTTCCTTCCATGCCACTCT
CTCTACCTGCACGCAATGCTTTGATTGTTGTGTTTGCCTTGGCCTTCTGC
TCCCTCTTTTGTCCTTTTTGTCCTTTTTGTCGTCACTTGTTGTGTTTTCG
ACCCTCAACTCTTTCTGCGTTCGAACGCCAACAGTGGCTCCACGAGAACC
GGTCCGAGGGGTACAGTGACGCCGCCCTCGCCATGGCGGCCGGCCGCGGC
CACATGCCCACGGTGGAATGGTTCTACGGCAACAGCGTCCCGGGAGACAT
CTGCAAGGCCATCGACGAGGCACAAGCGGGGGGTCACGTAGAGGTATGTA
GGTTTCTAGAACAACACGAGGCCGGGGGGGGGGGGGGCTGGTACGCGTGT
TTTTTGTAGATTATTTGCTATGTCGCGCAGAGGAAGGCAGGTGGTTTTGC
CGCGTTTTTCTTAACAATACCGAGGGACCGCCTACGCACGAAATCAAGAG
TATCTACGGAATACAACAGTGAGGGGGTACGCAGACCCTAACCCTAACCC
TAACCCCAAAGCACGGATTCAATACTTTATCCCATACGTTTTCTGAGAGA
GAAAAAGCTGCGAAGGCAACTGATACCGACCGAGCGTGCTTTGTGTGCAT
CGCTCTGTCGCTGCGAGTATTGCCATCGAGCACACACAAACAAGTATTTG
TTTTGTGTTTGGTTCCCCCCCCAGAGGGTGGGGGCCTTGGATGAGATGCG
ATGATCGTGGGTGGCGAGTCTACTGGTCCATGTTTTCGAGAGAAGAATGG
GAGGTTGCTCTGTGTACACGCGGTGGTTGTGCCGTTGACGTTGTTGTTCA
CCAGCCCGCTTCTCAATCAACCCATCCATCGGACGCTAAATTACAGACAG
GAACCGTCAGCAGTTGTCAGGAAGATACTGCTGTATCCATGTTTTGGAGT
CACCCGTTCCCTCACCACTGCTGCTGCTGCTGCTGCTGCCCCCATTTTCG
CACCGATATCAGGTCGTGGACTGGCTGAAGAGCCACAGCTCCAACAAAAA
GTCCCGCGTCGATGCCAATGCCAGTGCCAAGCCCGCCGGCTCCTCTGCCG
CCGCCGCCTCATCCCCATCCAGCTTCCAGCGTCAGCCGCCTAGCGGTGGT
GGCGGCCACCCCCAGCAGATGGTTCCGCCGTGAGTATTTACTTCTATGCG
CTGTAGTTCTCTCTTTCTCAGGCACGAACAAAACCGAACAAGCGCCACCA
AACGTTTTCTGCATGTACCTATATTGTATGTATGTAAATGCATGGAATTC
ATGTATTTTTCGTTTTCTTACACCTTGTCGAATGTTAAACGTCTCCAAAA
CGATCAAAACAAATTCGTTCGTCGCACCGCTTCCCGATTGTCTTGTCTTG
TCTCAAAACTCTAGAGATCTGCCGCGCATTCCTACGCACGACGCACACGT
GCCTTGTGTATCTCGCATGTATGATGTATGATACGAGTACGTACTCGTCG
GCTTGCCCCATCGCGTCGTACACCGTTACATATCTCCACCGCACCAGGCC
CGCCCACGGGGCCAAGGCTTGCCCCCCGATGGGAATGTTCGGGTCCCCCT
TCGGCAACTTCTCACCTGTGAACGGCATCGTCTTGCCGGGTCCCGCGGCC
CAGGCGATCGTCCCCAAGCAGGTTGGTCCGGCGGAGGTATATACTGCATG
ACTAGCCAGGTTACGGGAAACATAAATCGGTAGCCAGTTTACGTATTCGG
AAAGACCTGACGCACGGGCGTTTTGCGACGTTTGGGTTTGGGTTTGGGGG
GCTAATTAATGCTCATGACATATTGTTTCTGTCTGTTCAAGACGCGGCGG
TTCAAAGCTTCACATTTACCGGCGGGCGCTGCTGTTCGACGAATGTAGAT
ATATTTTTTCTATAAAAAGCTGATTTTCTCGTTTTGATTCCATGACCCGA
ATGAAACGAAACCCAGGCCGCCACCGGAGTGATTTCGTCCTCCGCCCCGT
CTTCGTCGGCTTCGTCCTCCTCCACCAAGCCCTCGTTGTCCGCGGGGGGC
GGGCACGGAGGAGGCTCGCAGCGGCTCCGCAGCAACATGCTACGCTCGCC
CGAGCTCACGCTGGCTACGTCGGGGAGGCTGAGGTGATTATCTTTTGAAC
TCTCGGGAAGTTACTTATAATGTGTATGTGTTCGTGTGTTTTGTTTATTT
CTGTGTCTCTTTGCCGAAACGGCAGCCGTTTGGTTGTTGTGCGCCCTCTC
TCTAGGTGTGTACGCGTGCGTGCGCCGATGATGTCGTTGCCTTGAAACTG
GAAAGACACTGCTGTGATTGTTTTTTTCGTTTTTTGTTTTTTTGTTTTGG
TTGTTGCAGCACGACGGACGAGCGGCAGCTGAAGGCTGTGATGGAGTTCA
GGAAGGCGTACAGCGCTAAGGCATTGGAGGGCTCCAATATTCCCAAGGTC
CAACGAGAACACAGCATAGCGGAGCATGTACTACTATCTCGTTTCAGCTC
TCTAGTATGTAGCATGTGGCGAGCTATTCGCTCCTCTTCCACGGAGGTTC
GGTTCAAATGGAGGTAACGTTGAGACGTCCACCACTGAGCTTGTTGCCGA
AGAGGTTTGAGGCCGTGGCTGTCCTTTGTCGCGGTTTGTCGTTTTTCATC
GCTGACTTTTCTGTCGTTCGTGTGGTGTGGTGTGGTGTCTTGCCAGGATC
CATTCACGCTGTTCGCGGTGTGGTTCGAGGAGGCCAGGATCGCCCGCGCC
AGCGAACCAGGGGCAATGTGCCTGTCCACTGTGGGTCCCACCGGACGCCC
CAGCGCTCGTTACGTCATGCTTCAGGTGAATTTGCGTGTGTCATTCACAT
GGGTAGGTAGTCTCTTTTGTTTGTAGTGCTCGTTTCTTCGTGTTCCAAGG
CGAACAGGCATACGTCTTCATTCGCGTGGGTTCTCTTTGAGCACCGCCGT
TGGAGGGGAGAAGGGGCGGGGGGCGGGGGGGAGACTCTTATGCGACGACT
CGACTCGACTCGACTCGCTCGCTCGCTCGCTCCACGCCAGCACGTTTGTC
CAAAACACAAGATCCAAGGCTTTTGAGTCGGCCATCTCATCACCTTTCCT
TTTAGTTTCGCGTCTGCGGCAATCTGTCCGATCACACGAATGTGCGCTCA
CGCCCCACCCAGCCACCCACCCACCCCCTGCTGCTGCTGCTATTGCTGCC
CTCATCTTTCTCTCTTCGGCCTGCCAACGGCAAAAATACTTGGCTATGAC
GGTCGCCACCTACCGAATCGGTGCACCCATCCTCCGCAGGGTTTTGACAA
GCGAGGGTTTGTTTGGTACACCAACTTCGAGAGCCGCAAGTCTCAGGAGA
TGTCGCACAACCCGTACGGAGCGTTGTCGTTCTGGTGGAGCGAGGTGCAG
CGCGCTGTTCGCATCGAAGGGGTCGTGTGCAAGGTACATACGTGCACACA
AGGGGTCGGGGTGATCGGGGGCACAGCGGTTCCTTCCTCTTTTCCTTTAC
TTTCCCCTGGGCGTTCCTTCGTGAGGGTGTTGATCGTTGATCGTAAGTTG
GGCTGTTTGATGGCATAGCACGGTTGTTGTTGACGTCGCTCTGCTCGTGG
CCCTCACTCCTCGTATGAAGGATGTCGATGTTGTGTTGACGGCTGCTGCT
CGCAGGTGACGGAGAAGGAGAGCACAGAGTACTTCCAGAGCCGGCCTCGC
GGGAGCCAGGTTGGGGCGTGGGCGCTGCACCAGAGCCGGCCGGTGGAGAG
CCGCGGGTCTCTAGAGGCGAACGTCAAGGACGTGCAGGTGCATGCTTTGT
TTGGTTTGTTGTGCCGCTCGTTCGTTGTGCTTCATGGTCGTTGTTGATTG
GTTCGTTTCAGCGAGATTTAGAGGCGAACCGCGCTCGCGGGCGGGCGCGG
GGGCGTCAGTGCGGTGCGGACAGGAGGTCTGGTGATTGTGTTCTGTTTCG
ATGATCATGAGCGAAAGTCTTGTCTGTTTTTGCCCTTGAGCCGGGAGACG
GGAGCACAGGCGGTTTTCGGCTCGTACTTCCCGATCACGCGAAGTGCGGT
GATTCCATGGAACACAGAAACGTCGGTTTCTATCACATCTCCTTCGGATG
GATTTGCATGACTGAAAGCATGGACGTTTTATTTTCTTTACTTGGCTTCA
GGAACGCGACGTTCCTGATTTCATGATTTTCCCATATCCGCCTTGTGACC
CCCCCCCCTCCCGCCCTCTATATGGCGGCCCCCTTCCCCCTCCTCCCCCG
TGCCTTTGACACCCTCCCACCAAAACCCCCACCAGACCAAGTTCAGCTCT
ATCAGGGACGTTCCACGCCCGCCACACTTCGGCGGCTTCCGCCTAAGGCC
CGACCGGATAGAGTTCTGGAAAGGCCGCCAGACCCGCATCCACGACCGGA
TTGTGTACGTCATCATGGACGACAAGTGGATCATGCAGCGCCTGCAGCCG
TAG back to topCoding sequence (CDS) from alignment at C-linearis_contig112:134216..144068+ >mRNA_C-linearis_contig112.1515.1 ID=mRNA_C-linearis_contig112.1515.1|Name=mRNA_C-linearis_contig112.1515.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3696bp|location=Sequence derived from alignment at C-linearis_contig112:134216..144068+ (Chordaria linearis ClinC8C monoicous)
TCGCCACGTTCTCTCTGTGTCTACTCCCGAAGTTACGAACACGCGCACCT
TCTCATCTTCATCTTTCATTCGAGGGACAGAGAAGGAAGGGTTAGGAAAG
GCTCACAAGGCTTCAACGCCTCCATGAGTGGACTCGGATTGCTGTCGCCA
CGTTCTCTCTGTGTCTACTCCCGAAGTTACGAACACGCGCACCTTCTCAT
CTTCATCTTTCATTCGAGGGACAGAGAAGGAAGGGTTAGGAAAGGCTCAC
AAGGCTTCAACGCCTCCATGAGTGGACTCGGATTGCTGGTCACCGCAAGT
GAACGGGCTGGCAGCGGTAACATGGACAACAGCAACACCGGAGGCGGTGG
GTCGCCGAGAGGCAGCAAGCGCCGCGCGGAAGAGCCCGCCGTGAAGATAA
CAGAGCAGCAGGCCGGCGGCGGTGGGGGGGAGAGTACAGCAGCCGCGTCT
GACAAGAAGGACCGGGGAGAGGAAGGGACGGGAGGGGGCAAGAAGGACAT
GGAGGAGGAGGAGGGGAAGGGAGATCTGGCCGCCGGGCGTGGCGATTTGG
AGTTCTGCCAGCGGAAGGTCACCGCAAGTGAACGGGCTGGCAGCGGTAAC
ATGGACAACAGCAACACCGGAGGCGGTGGGTCGCCGAGAGGCAGCAAGCG
CCGCGCGGAAGAGCCCGCCGTGAAGATAACAGAGCAGCAGGCCGGCGGCG
GTGGGGGGGAGAGTACAGCAGCCGCGTCTGACAAGAAGGACCGGGGAGAG
GAAGGGACGGGAGGGGGCAAGAAGGACATGGAGGAGGAGGAGGGGAAGGG
AGATCTGGCCGCCGGGCGTGGCGATTTGGAGTTCTGCCAGCGGAAGGGCC
TGAACTTCACGACAAGGGCGATGGACGGTGCCGCCGCGGGGGGGCACCTG
GCCATGGTGAAGTGGCTGCATGAGAAGGGTTCCGGGTGCACCACGGCCGC
GGTGGACTCGGCAGCCCAGGAAGGACACCTGGAGGTCGTGCAGGGCCTGA
ACTTCACGACAAGGGCGATGGACGGTGCCGCCGCGGGGGGGCACCTGGCC
ATGGTGAAGTGGCTGCATGAGAAGGGTTCCGGGTGCACCACGGCCGCGGT
GGACTCGGCAGCCCAGGAAGGACACCTGGAGGTCGTGCAGTGGCTCCACG
AGAACCGGTCCGAGGGGTACAGTGACGCCGCCCTCGCCATGGCGGCCGGC
CGCGGCCACATGCCCACGGTGGAATGGTTCTACGGCAACAGCGTCCCGGG
AGACATCTGCAAGGCCATCGACGAGGCACAAGCGGGGGGTCACGTAGAGT
GGCTCCACGAGAACCGGTCCGAGGGGTACAGTGACGCCGCCCTCGCCATG
GCGGCCGGCCGCGGCCACATGCCCACGGTGGAATGGTTCTACGGCAACAG
CGTCCCGGGAGACATCTGCAAGGCCATCGACGAGGCACAAGCGGGGGGTC
ACGTAGAGGTCGTGGACTGGCTGAAGAGCCACAGCTCCAACAAAAAGTCC
CGCGTCGATGCCAATGCCAGTGCCAAGCCCGCCGGCTCCTCTGCCGCCGC
CGCCTCATCCCCATCCAGCTTCCAGCGTCAGCCGCCTAGCGGTGGTGGCG
GCCACCCCCAGCAGATGGTTCCGCCGTCGTGGACTGGCTGAAGAGCCACA
GCTCCAACAAAAAGTCCCGCGTCGATGCCAATGCCAGTGCCAAGCCCGCC
GGCTCCTCTGCCGCCGCCGCCTCATCCCCATCCAGCTTCCAGCGTCAGCC
GCCTAGCGGTGGTGGCGGCCACCCCCAGCAGATGGTTCCGCCGCCCGCCC
ACGGGGCCAAGGCTTGCCCCCCGATGGGAATGTTCGGGTCCCCCTTCGGC
AACTTCTCACCTGTGAACGGCATCGTCTTGCCGGGTCCCGCGGCCCAGGC
GATCGTCCCCAAGCAGGCCCGCCCACGGGGCCAAGGCTTGCCCCCCGATG
GGAATGTTCGGGTCCCCCTTCGGCAACTTCTCACCTGTGAACGGCATCGT
CTTGCCGGGTCCCGCGGCCCAGGCGATCGTCCCCAAGCAGGCCGCCACCG
GAGTGATTTCGTCCTCCGCCCCGTCTTCGTCGGCTTCGTCCTCCTCCACC
AAGCCCTCGTTGTCCGCGGGGGGCGGGCACGGAGGAGGCTCGCAGCGGCT
CCGCAGCAACATGCTACGCTCGCCCGAGCTCACGCTGGCTACGTCGGGGA
GGCTGAGGCCGCCACCGGAGTGATTTCGTCCTCCGCCCCGTCTTCGTCGG
CTTCGTCCTCCTCCACCAAGCCCTCGTTGTCCGCGGGGGGCGGGCACGGA
GGAGGCTCGCAGCGGCTCCGCAGCAACATGCTACGCTCGCCCGAGCTCAC
GCTGGCTACGTCGGGGAGGCTGAGCACGACGGACGAGCGGCAGCTGAAGG
CTGTGATGGAGTTCAGGAAGGCGTACAGCGCTAAGGCATTGGAGGGCTCC
AATATTCCCAAGCACGACGGACGAGCGGCAGCTGAAGGCTGTGATGGAGT
TCAGGAAGGCGTACAGCGCTAAGGCATTGGAGGGCTCCAATATTCCCAAG
GATCCATTCACGCTGTTCGCGGTGTGGTTCGAGGAGGCCAGGATCGCCCG
CGCCAGCGAACCAGGGGCAATGTGCCTGTCCACTGTGGGTCCCACCGGAC
GCCCCAGCGCTCGTTACGTCATGCTTCAGGATCCATTCACGCTGTTCGCG
GTGTGGTTCGAGGAGGCCAGGATCGCCCGCGCCAGCGAACCAGGGGCAAT
GTGCCTGTCCACTGTGGGTCCCACCGGACGCCCCAGCGCTCGTTACGTCA
TGCTTCAGGGTTTTGACAAGCGAGGGTTTGTTTGGTACACCAACTTCGAG
AGCCGCAAGTCTCAGGAGATGTCGCACAACCCGTACGGAGCGTTGTCGTT
CTGGTGGAGCGAGGTGCAGCGCGCTGTTCGCATCGAAGGGGTCGTGTGCA
AGGGTTTTGACAAGCGAGGGTTTGTTTGGTACACCAACTTCGAGAGCCGC
AAGTCTCAGGAGATGTCGCACAACCCGTACGGAGCGTTGTCGTTCTGGTG
GAGCGAGGTGCAGCGCGCTGTTCGCATCGAAGGGGTCGTGTGCAAGGTGA
CGGAGAAGGAGAGCACAGAGTACTTCCAGAGCCGGCCTCGCGGGAGCCAG
GTTGGGGCGTGGGCGCTGCACCAGAGCCGGCCGGTGGAGAGCCGCGGGTC
TCTAGAGGCGAACGTCAAGGACGTGCAGGTGCATGCTTTGTGACGGAGAA
GGAGAGCACAGAGTACTTCCAGAGCCGGCCTCGCGGGAGCCAGGTTGGGG
CGTGGGCGCTGCACCAGAGCCGGCCGGTGGAGAGCCGCGGGTCTCTAGAG
GCGAACGTCAAGGACGTGCAGGTGCATGCTTTCTCTATCAGGGACGTTCC
ACGCCCGCCACACTTCGGCGGCTTCCGCCTAAGGCCCGACCGGATAGAGT
TCTGGAAAGGCCGCCAGACCCGCATCCACGACCGGATTGTGTACGTCATC
ATGGACGACAAGTGGATCATGCAGCGCCTGCAGCCGTAGCTCTATCAGGG
ACGTTCCACGCCCGCCACACTTCGGCGGCTTCCGCCTAAGGCCCGACCGG
ATAGAGTTCTGGAAAGGCCGCCAGACCCGCATCCACGACCGGATTGTGTA
CGTCATCATGGACGACAAGTGGATCATGCAGCGCCTGCAGCCGTAG back to top
|