mRNA_C-linearis_contig112.1511.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig112.1511.1 vs. uniprot
Match: D8LNJ4_ECTSI (Glutamyl-tRNA reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNJ4_ECTSI) HSP 1 Score: 964 bits (2492), Expect = 0.000e+0 Identity = 519/587 (88.42%), Postives = 552/587 (94.04%), Query Frame = 1
Query: 142 STPLASAGCPFVRVLYLHFVLLLALFTSCEASTTTPKGGCPLSRLQAAFQAPFNSLSLALHGQQQTAAMSSVTSRDKSTFSGTSSSSTGAPRWVTAGARSRVVRSRTVDVRPLGMSAVETKPGSKRAAEGQPEEAKETKAEKKARRMAASSTPLGVHVIGLSHHNAGVDIREKLAVPEAEWNLASAKLCEYPNIQEAAVLSTCNRFEVYVAAADSHAAIRDVMTHLQEHSGLSQAELRQNLFMLSREDAVWHLLKVSAGLDSLVVGEGQILSQVRQCYLHGTEQDGSAGKVVARMLNTAVSAGKRARSETSISKGAVSISSAAAEFSKMRADKDVGKKLVDSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELAEEFPDIEMDVRLGAEDPTELERAITEADIIFTSTSATGCIVAKDQLERLGAGTERPVMFVDISVPRNVESDCDELDGVFAYDVDDLKMVVARNTALRRREMLEAETILQEEHLKFSGWQQSLTATPAISKMQEKFESMRAQEMRKAGNKLQNLSEKELQVVEKLSQGIVNKMLHGPMSALRQPDGPEEKKQTLKILKDMFKLEKL 1902
S P ASAGCPFVRVLYLHFVLLLA FTS EA+ T KGGCP+SRLQAAFQAPFNSLSLALHGQQ T MSS+T+RD+S+ ++ +TGAPRWV+ G RSRVVRSRTVDV+PLGMSAVETKPG+KRAAEG+PEEAKETKA+KKARR+AASSTPL VHVIGLSHHNAGVD+RE+LAVPEAEWNLASAKLC Y NI+EAAVLSTCNRFEVYVAA D+HAAIRDVMTHLQE+SGLSQ+ELRQNLFMLSREDAVWHLL+VSAGLDSLVVGEGQILSQVRQCYLHGTE+DGSAGKVVARMLNTAVSAGKRAR+ETSISKGAVSISSAAAEFSKMRA+KD+GKKLV SSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTEL EEFPDIEMDVRLGAEDPTELERAI EADIIFTSTSATGCIV K+QLERL AG ERPVMFVDISVPRNVE+DC ++ GVFAYDVDDLKMVVARNTALRRREMLEAE IL EEH KFSGWQQSL+ATPAISKMQEKFE MRAQEMRKAGNKL NLS+KELQVVEKLSQGIVNKMLHGPMSALRQP GP+EKKQTLKILKDMFKLEKL
Sbjct: 2 SAPSASAGCPFVRVLYLHFVLLLAFFTSVEATAMT-KGGCPVSRLQAAFQAPFNSLSLALHGQQAT--MSSLTARDRSSSPPIAAGNTGAPRWVSEGVRSRVVRSRTVDVKPLGMSAVETKPGNKRAAEGEPEEAKETKAQKKARRIAASSTPLSVHVIGLSHHNAGVDVRERLAVPEAEWNLASAKLCGYENIREAAVLSTCNRFEVYVAATDAHAAIRDVMTHLQEYSGLSQSELRQNLFMLSREDAVWHLLRVSAGLDSLVVGEGQILSQVRQCYLHGTEKDGSAGKVVARMLNTAVSAGKRARAETSISKGAVSISSAAAEFSKMRAEKDLGKKLVGSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELMEEFPDIEMDVRLGAEDPTELERAIGEADIIFTSTSATGCIVGKEQLERLEAGKERPVMFVDISVPRNVEADCSDVPGVFAYDVDDLKMVVARNTALRRREMLEAEDILSEEHNKFSGWQQSLSATPAISKMQEKFEGMRAQEMRKAGNKLPNLSDKELQVVEKLSQGIVNKMLHGPMSALRQPGGPDEKKQTLKILKDMFKLEKL 585
BLAST of mRNA_C-linearis_contig112.1511.1 vs. uniprot
Match: A0A836CGD2_9STRA (Glutamyl-tRNA reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGD2_9STRA) HSP 1 Score: 615 bits (1585), Expect = 1.070e-207 Identity = 359/603 (59.54%), Postives = 430/603 (71.31%), Query Frame = 1
Query: 130 MASTSTPLASAGCPFVR--------VLYLHFVLLLALF-----TSCEASTTTPKGGCPLSRLQAAFQAPFNSLSLALHGQQQTAAMSSVTSRDKSTFSGTSSSSTGAPRWVTAGARSRVVRSRTVDVRPLGMSAVETKPGSKRAAEGQPEEAKETKAEKKARRMAASSTPLGVHVIGLSHHNAGVDIREKLAVPEAEWNLASAKLCEYPNIQEAAVLSTCNRFEVYVAAADSHAAIRDVMTHLQEHSGLSQAELRQNLFMLSREDAVWHLLKVSAGLDSLVVGEGQILSQVRQCYLHGTEQDGSAGKVVARMLNTAVSAGKRARSETSISKGAVSISSAAAEFSKMRADKDVGKKLVDSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELAEEFPDIEMDVRLGAEDPTELERAITEADIIFTSTSATGCIVAKDQLERLGAGTERPVMFVDISVPRNVESDCDELDGVFAYDVDDLKMVVARNTALRRREMLEAETILQEEHLKFSGWQQSLTATPAISKMQEKFESMRAQEMRKAGNKLQNLSEKELQVVEKLSQGIVNKMLHGPMSALRQPDGPEEKKQTLKILKDMFKLEK 1899
M+ + +A+ CP R V Y+H +LLL+ E CP+SR AFQ P N L +QQ ++ ++ T S S +S AR R R P MSAVE + KKA+R S+ PL VHVIGLSHHNA +++REKLAVPEA WN+ S LCE +I EAAVLSTCNRFE Y+AA D+HAAIR+ + HLQ+ SGLSQA LR++LF+LS EDAVWHLL+VSAGLDSLVVGEGQILSQVRQCYLHGTE+ GSAGKVVAR+LNTAVSAGKRAR+ETSISKGAVSISSAAAEFSK R + D+ K +++ + I+GAG M+RLLL+HL SLGIK+V LVNRSMPKC EL EF I+ ++ L EL+ + ++DI++T TSATGCIV +D+L LG G PVMFVDISVPRNVES+C+E+DGV AYDVDDLKMVVARNTA+RR+EMLEAE IL EE +KF GWQQSLTA PAISKMQEKFE+MRA+E+RKA NKL +LS KE++VVEKLS+GIVNKMLHGPMSALRQP+GPEEKK+TL LK MF+LEK
Sbjct: 1 MSRDAAAMAAPRCPIKRISQTLSLGVFYMHILLLLSFLGIATARRAEGVANGAWSKCPISRRLTAFQ-PSNVPGL----RQQQSSTATFTHNRSPALSLRSEAS----------ARRRRAR-------PTWMSAVEDQXXXXXXXXX-------XXGSKKAKRKENSTAPLQVHVIGLSHHNAALEVREKLAVPEANWNMESEALCEQDSIVEAAVLSTCNRFETYIAAHDAHAAIRETIAHLQQRSGLSQATLRRSLFILSGEDAVWHLLRVSAGLDSLVVGEGQILSQVRQCYLHGTEEGGSAGKVVARLLNTAVSAGKRARAETSISKGAVSISSAAAEFSKHRCEFDIQKPFLEARLTIVGAGTMSRLLLIHLQSLGIKEVTLVNRSMPKCLELQAEFDAIKFNLHLA----DELDAVVAKSDIVYTGTSATGCIVTRDRLRELGVGAAHPVMFVDISVPRNVESECNEVDGVHAYDVDDLKMVVARNTAMRRKEMLEAEAILVEEQIKFQGWQQSLTAIPAISKMQEKFEAMRAEEVRKAANKLASLSPKEMEVVEKLSKGIVNKMLHGPMSALRQPEGPEEKKRTLATLKTMFRLEK 570
BLAST of mRNA_C-linearis_contig112.1511.1 vs. uniprot
Match: A0A836C898_9STRA (Glutamyl-tRNA reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C898_9STRA) HSP 1 Score: 603 bits (1556), Expect = 4.530e-203 Identity = 321/448 (71.65%), Postives = 380/448 (84.82%), Query Frame = 1
Query: 556 KAEKKARRMAASSTPLGVHVIGLSHHNAGVDIREKLAVPEAEWNLASAKLCEYPNIQEAAVLSTCNRFEVYVAAADSHAAIRDVMTHLQEHSGLSQAELRQNLFMLSREDAVWHLLKVSAGLDSLVVGEGQILSQVRQCYLHGTEQDGSAGKVVARMLNTAVSAGKRARSETSISKGAVSISSAAAEFSKMRADKDVGKKLVDSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELAEEFPDIEMDVRLGAEDPTELERAITEADIIFTSTSATGCIVAKDQLERLGAGTERPVMFVDISVPRNVESDCDELDGVFAYDVDDLKMVVARNTALRRREMLEAETILQEEHLKFSGWQQSLTATPAISKMQEKFESMRAQEMRKAGNKLQNLSEKELQVVEKLSQGIVNKMLHGPMSALRQPDGPEEKKQTLKILKDMFKLEK 1899
KA+KK R+ AS+T L VHVIGLSHHNA V++REKLAVPE+EWN SA+LCE P++ EA+VLSTCNRFEVYVAAAD+HAAIR+ + LQE SGLSQA LR++LF+LS EDAVWH+L+VSAGLDSL+VGEGQILSQVRQCYLHGTE+DG AGKVVAR+LNTAVSAGKR RSETSISKGAVSISSAAAEFSK R + D + + +AI+GAG M+RLLLVHL SLGI+ + LVNRSMP+C EL EF D+ + ++L E+E I ++DI++T TSAT CIV + +LE LG G PVMFVDISVPRNVE++C++++GVFAYDVDDLKMVVARNTALRR+EML+AE IL EE KF GWQQSLTA PAISKMQEKFE+MRA E++KA NKL LS KE++VVEKLS+GIVNKMLHGPMSALRQP+GPE+KK+TL+ILK MFKLEK
Sbjct: 146 KADKK-RKENASNTLLNVHVIGLSHHNAAVEVREKLAVPESEWNAESARLCENPSVLEASVLSTCNRFEVYVAAADAHAAIRETIQALQERSGLSQAVLRRSLFILSGEDAVWHVLRVSAGLDSLIVGEGQILSQVRQCYLHGTEEDGYAGKVVARLLNTAVSAGKRVRSETSISKGAVSISSAAAEFSKFRCEMDNKRPFEGARIAIVGAGTMSRLLLVHLQSLGIRAITLVNRSMPRCLELQAEFTDMALTLKLA----DEMEDVIAQSDIVYTGTSATACIVTRARLEELGIGKAHPVMFVDISVPRNVEAECNDVEGVFAYDVDDLKMVVARNTALRRKEMLDAEVILAEEQDKFQGWQQSLTAIPAISKMQEKFEAMRADEVKKAANKLGGLSPKEMEVVEKLSKGIVNKMLHGPMSALRQPEGPEQKKRTLQILKAMFKLEK 588
BLAST of mRNA_C-linearis_contig112.1511.1 vs. uniprot
Match: A0A7S2V0V0_9STRA (Glutamyl-tRNA reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0V0_9STRA) HSP 1 Score: 518 bits (1333), Expect = 2.850e-170 Identity = 279/454 (61.45%), Postives = 351/454 (77.31%), Query Frame = 1
Query: 550 ETKAEKKARR---MAASSTPLGVHVIGLSHHNAGVDIREKLAVPEAEWNLASAKLCEYPNIQEAAVLSTCNRFEVYVAAADSHAAIRDVMTHLQEHSGLSQAELRQNLFMLSREDAVWHLLKVSAGLDSLVVGEGQILSQVRQCYLHGTEQDGSAGKVVARMLNTAVSAGKRARSETSISKGAVSISSAAAEFSKMRADKDVGKKLVDSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELAEEFPDIEMDVRLGAEDPTELERAITEADIIFTSTSATGCIVAKDQLERLGAGTERPVMFVDISVPRNVESDCDELDGVFAYDVDDLKMVVARNTALRRREMLEAETILQEEHLKFSGWQQSLTATPAISKMQEKFESMRAQEMRKAGNKLQNLSEKELQVVEKLSQGIVNKMLHGPMSALRQPDGPEEKKQTLKILKDMFKLEKL 1902
+T AEKKA+R +A SS PL VHVIGLSHHNA V +REKLAVPEA+WN SA+L I EAA+LSTCNRFEVYV A ++H AIRD + L E SGL Q+ELR+NLF+LS EDA H+L+VS GLDSLVVGEGQILSQVRQCYLHG E+DGSAGKV +RMLN AVSAGKR R+ET+IS+GAVSISSAA EFS MRA KD+ K +DS + I+GAGKM+RLL+ H+ S G+K+V LVNR++ LA+E+PD++ ++R TE+ A+ E+DI + ST+AT CI+ K+ L L +P+M VDISVPRNVE C+E++ VF+Y+VD+LK VVARNTA+RR+E+LEAE +L+EE KF GWQQSL A P IS +QEK E MRA E KA KL +LS+KELQ+V+K+++G+VNK+LHGPM++LR +GPEE + TL +K MFKL L
Sbjct: 104 DTAAEKKAKRDKRLAQSSKPLDVHVIGLSHHNADVSVREKLAVPEADWNTVSAQLVAMEGIDEAAILSTCNRFEVYVGAHEAHEAIRDTILFLSERSGLPQSELRKNLFILSGEDATKHVLRVSGGLDSLVVGEGQILSQVRQCYLHGIEEDGSAGKVTSRMLNVAVSAGKRVRAETAISRGAVSISSAAVEFSNMRAPKDLNKDFLDSKLCIVGAGKMSRLLVTHMSSFGVKEVTLVNRNLDNAQALADEYPDVKFNIR----PMTEMWDAVMESDIAYASTAATECIITKEGL--LQRQPTKPLMLVDISVPRNVEQQCEEVESVFSYNVDNLKSVVARNTAMRRKEVLEAEDLLEEELQKFLGWQQSLQAIPTISSLQEKAEQMRAAEFGKATKKLSDLSKKELQIVDKMTKGLVNKLLHGPMTSLRSSEGPEETRSTLAAVKAMFKLGNL 551
BLAST of mRNA_C-linearis_contig112.1511.1 vs. uniprot
Match: A0A7S1U057_9STRA (Glutamyl-tRNA reductase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U057_9STRA) HSP 1 Score: 486 bits (1250), Expect = 4.610e-159 Identity = 266/453 (58.72%), Postives = 343/453 (75.72%), Query Frame = 1
Query: 577 RMAASSTPLGVHVIGLSHHNAGVDIREKLAVPEAEWNLASAKLCEY--PNIQEAAVLSTCNRFEVYVAAADSHAAIRDVMTHLQEHSGLSQAELRQNLFMLSREDAVWHLLKVSAGLDSLVVGEGQILSQVRQCYLHGTE------QD------GSAGKVVARMLNTAVSAGKRARSETSISKGAVSISSAAAEFSKMRADKDVGKKLVDSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELAEEFPDIEMDVRLGAEDPTELERAITEADIIFTSTSATGCIVAKDQLERLGAGTERPVMFVDISVPRNVESDCDELDGVFAYDVDDLKMVVARNTALRRREMLEAETILQEEHLKFSGWQQSLTATPAISKMQEKFESMRAQEMRKAGNKLQNLSEKELQVVEKLSQGIVNKMLHGPMSALRQPDGPEEKKQTLKILKDMFKL 1893
R S+ PL VHV+GLSHHNA V++REKLAVPE +WN AS +CE+ NI+EAAVLSTCNRFEVYVA++D+ AA+ D +L E SG+ ++LR++LFMLS E+AVWHLL+V+ GLDSLVVGEGQIL+QV+ C+ GTE +D GSAGKVV+++LNTAV++GKR RSET+IS+GAVSISSAAAEFS RA+ DVGK L D+S+ IIGAGKMT+LLL HL S GI K IL+NRS P+ LA E+PD M++++G D E + ++DI+FTSTS+ V K+ LE+ G ERP+MFVDISVPRNV+ D ++L+GV +Y+VDDLK VVARNTA+R+RE+LEAE +L EE K+ GWQ+SL A PAI+ +Q+K E RA E++K KL LS KE VE+LS+GIVNK+LHGPM+++R + PE+KK+TL L MF L
Sbjct: 23 RAPGSTKPLEVHVVGLSHHNAEVEVREKLAVPEDQWNEASKAICEFGNQNIKEAAVLSTCNRFEVYVASSDARAAMYDATKYLSERSGIPMSKLRESLFMLSGEEAVWHLLRVAGGLDSLVVGEGQILAQVKACFERGTELPVEADEDREAVVGGSAGKVVSKLLNTAVASGKRVRSETAISRGAVSISSAAAEFSASRAEADVGKSLKDASILIIGAGKMTKLLLTHLNSAGISKAILLNRSRPRMEALAAEYPD--MEIQMGLMD--ECWDRVRQSDIVFTSTSSEEAFVTKEVLEQEKVGQERPIMFVDISVPRNVDRDTNDLEGVASYNVDDLKAVVARNTAMRQREVLEAEILLAEEKAKYRGWQESLGAVPAINALQKKAEDFRAAELQKVAGKLDKLSSKERDAVERLSRGIVNKLLHGPMTSVRANENPEDKKRTLNTLNKMFGL 471
BLAST of mRNA_C-linearis_contig112.1511.1 vs. uniprot
Match: A0A4D9D291_9STRA (Glutamyl-tRNA reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D291_9STRA) HSP 1 Score: 484 bits (1245), Expect = 1.150e-156 Identity = 258/439 (58.77%), Postives = 331/439 (75.40%), Query Frame = 1
Query: 577 RMAASSTPLGVHVIGLSHHNAGVDIREKLAVPEAEWNLASAKLCEYPNIQEAAVLSTCNRFEVYVAAADSHAAIRDVMTHLQEHSGLSQAELRQNLFMLSREDAVWHLLKVSAGLDSLVVGEGQILSQVRQCYLHGTEQDGSAGKVVARMLNTAVSAGKRARSETSISKGAVSISSAAAEFSKMRADKDVGKKLVDSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELAEEFPDIEMDVRLGAEDPTELERAITEADIIFTSTSATGCIVAKDQLERLGAGTERPVMFVDISVPRNVESDCDELDGVFAYDVDDLKMVVARNTALRRREMLEAETILQEEHLKFSGWQQSLTATPAISKMQEKFESMRAQEMRKAGNKLQNLSEKELQVVEKLSQGIVNKMLHGPMSALRQPDGPEEKKQTLKILKDMFKL 1893
R A S TPL VHVIGLSHHNA V++REKL++PEA+WN A+ KLC I EA LSTCNRFE+Y AA DS+AA + L+ HSGL Q+ LR+NLF+LS EDA+WHL++VS GLDSLVVGEGQILSQV+QCY HG E+DG GKV++RMLN+AV+AGKR RSET ISKGAVSISSAA EFS++R KD+GK DS VAI+GAGKM+RLL++H+ S G+K V L+NR + LA EFP++E+ VRL +L + D+++TSTSA GC++ K+ ++ G + + VDISVPRNVE++ E++G+FAY+VD LK VV RNTA+R+++MLEAE +L EE KF WQ SL A PA+ K+QEK E+MR +E++KA KL NLSEKELQ VE+L++GIVNK+LHGPMS LR + E+ LK LK +F+L
Sbjct: 153 RKATSMTPLEVHVIGLSHHNAAVEVREKLSIPEAQWNEAANKLCGSGVIAEACTLSTCNRFEIYFAAHDSYAAFHEATAFLERHSGLPQSVLRKNLFLLSGEDAIWHLMRVSGGLDSLVVGEGQILSQVKQCYNHGMEEDGKGGKVISRMLNSAVAAGKRVRSETGISKGAVSISSAAVEFSQLRCPKDLGKPFEDSRVAIVGAGKMSRLLMIHMASQGVKAVTLMNRGRERAETLAAEFPEMEVAVRLM----DDLWPVMHSHDVVYTSTSAQGCLLTKENIQASGLAPGK--VIVDISVPRNVETEVSEIEGMFAYNVDHLKEVVDRNTAMRKKQMLEAEDLLVEEMEKFRSWQFSLGAVPALMKLQEKAETMRMEELKKASKKLNNLSEKELQTVERLTKGIVNKLLHGPMSHLRATEDLEKNLVALKTLKAVFEL 585
BLAST of mRNA_C-linearis_contig112.1511.1 vs. uniprot
Match: A0A7S0B1Y0_9STRA (Glutamyl-tRNA reductase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B1Y0_9STRA) HSP 1 Score: 453 bits (1166), Expect = 7.100e-146 Identity = 242/445 (54.38%), Postives = 329/445 (73.93%), Query Frame = 1
Query: 568 KARRMAASSTPLGVHVIGLSHHNAGVDIREKLAVPEAEWNLASAKLCEYPNIQEAAVLSTCNRFEVYVAAADSHAAIRDVMTHLQEHSGLSQAELRQNLFMLSREDAVWHLLKVSAGLDSLVVGEGQILSQVRQCYLHGTEQDGSAGKVVARMLNTAVSAGKRARSETSISKGAVSISSAAAEFSKMRADKDVGKKLVDSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELAEEFPDIEMDVRLGAEDPTELERAITEADIIFTSTSATGCIVAKDQLERLGAGTERPVMFVDISVPRNVESDCDELDGVFAYDVDDLKMVVARNTALRRREMLEAETILQEEHLKFSGWQQSLTATPAISKMQEKFESMRAQEMRKAGNKL---QNLSEKELQVVEKLSQGIVNKMLHGPMSALRQPDGPEEKKQTLKILKDMFKL 1893
K R+ A+S L VH +GLS H+A V++REKLA+PEA+WN AS ++C ++EAAVLSTCNRFE+Y AA D+ A + +L E S L + LR+NLFMLS +DAVWHL++V+ GLDSLVVGEGQILSQVRQC+LH E+DG GKV++R+LN AV+AGKR RSET+ISKG+VSISSAA E S+M+ D+ ++ +A IGAGKMTRLL+ HL S G++++ +VNRSM + ELAE+FPD++++++L +L I +DI++T+TS+ IV + LE G RP+M VDISVPRNV DC + V AY+VDDLK VVARNTA+R++EM+EAET+L+EE F GW++SL A PAI++++EK E+ R E++K KL +N SEKEL+ VE+LS+GIVNK+LHGPMS LR+ D + ++ ++ L DMF+L
Sbjct: 63 KEERLKAASKGLQVHCVGLSIHHAAVEVREKLAIPEADWNTASHQICSDGRVEEAAVLSTCNRFEIYYAATDARQAAARITEYLAERSDLPVSTLRKNLFMLSGDDAVWHLMRVAGGLDSLVVGEGQILSQVRQCHLHSIEEDGCGGKVLSRLLNGAVAAGKRVRSETAISKGSVSISSAAVELSEMKCGDDLSLPFSEARLAAIGAGKMTRLLITHLASRGLERITIVNRSMARPMELAEQFPDVDIEIKLA----DDLYDVIGRSDIVYTATSSEDYIVTEALLEENGLAGGRPLMLVDISVPRNVGEDCKNVPSVTAYNVDDLKAVVARNTAMRQKEMIEAETLLREEATAFIGWRESLAAVPAINRLREKAETHRQAELKKCTRKLSQNENFSEKELEAVERLSRGIVNKLLHGPMSHLRRSDSVDGRQAAVRELSDMFQL 503
BLAST of mRNA_C-linearis_contig112.1511.1 vs. uniprot
Match: A0A7S3LCA1_9STRA (Glutamyl-tRNA reductase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCA1_9STRA) HSP 1 Score: 448 bits (1153), Expect = 4.950e-144 Identity = 241/443 (54.40%), Postives = 330/443 (74.49%), Query Frame = 1
Query: 577 RMAASSTPLGVHVIGLSHHNAGVDIREKLAVPEAEWNLASAKLCEYPN-IQEAAVLSTCNRFEVYVAAADSHAAIRDVMTHLQEHSGLSQAELRQNLFMLSREDAVWHLLKVSAGLDSLVVGEGQILSQVRQCYLHGTEQDGSAGKVVARMLNTAVSAGKRARSETSISKGAVSISSAAAEFSKMRADKDVGKKLVDSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELAEEFPDIEMDVRLGAEDPTELERAITEADIIFTSTSATGCIVAKDQLERLGAGTERPVMFVDISVPRNVESDCDELDGVFAYDVDDLKMVVARNTALRRREMLEAETILQEEHLKFSGWQQSLTATPAISKMQEKFESMRAQEMRKAGNKLQ--NLSEKELQVVEKLSQGIVNKMLHGPMSALRQPDGPEEKKQTLKILKDMFKLE 1896
R+ A++ L VH +GLS H+A V++REKLA+PEA WN AS +LC + + EAAVLSTCNRFEVY AA D+ AA+ V +L + S L LR+NLFMLS EDAVWHL++VS GLDSLVVGEGQILSQVRQCYLH TE+DG GKV++R+LN AV+AGKR RSET+ISKG+VSISSAA E S+M + D+ + +A++GAGKMTRLL+ H+ S G++K+ +VNRS+ + EL E+FPD++++++L +L + +DI++T+TS ++ ++E G RP+M VDISVPRNV DC+EL GV AY+VDDLK VVA+NTA+R+REMLEAE +L+EE F+ W+++L+A P I+++QE+ + R +E+++ KL NLSE+E++ VE+LS+GIVNKMLHGPM+ LR+ + E K+ TLK L MF+LE
Sbjct: 59 RLEAATKGLQVHCVGLSIHHADVEVREKLAIPEANWNDASNELCNSSSAVAEAAVLSTCNRFEVYYAATDARAAMAAVTQYLAKRSDLPIGTLRKNLFMLSGEDAVWHLMRVSGGLDSLVVGEGQILSQVRQCYLHSTEEDGCGGKVLSRLLNNAVAAGKRVRSETAISKGSVSISSAAVELSEMMSMGDLQLPFDQARLAVVGAGKMTRLLITHMASRGLEKITIVNRSLGRPQELQEQFPDVDIEIKLM----DDLWDVVGRSDIVYTATSCEDYVIDAQKMEENGLDAGRPLMLVDISVPRNVGEDCNELKGVKAYNVDDLKAVVAKNTAMRQREMLEAEVLLREEATAFNAWREALSAVPTINQLQERANAFREEELKRCTRKLSGANLSEREMEAVERLSRGIVNKMLHGPMTHLRKTESIEGKQATLKELSAMFRLE 497
BLAST of mRNA_C-linearis_contig112.1511.1 vs. uniprot
Match: A0A1E7FCW6_9STRA (Glutamyl-tRNA reductase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCW6_9STRA) HSP 1 Score: 448 bits (1153), Expect = 1.280e-143 Identity = 238/443 (53.72%), Postives = 329/443 (74.27%), Query Frame = 1
Query: 577 RMAASSTPLGVHVIGLSHHNAGVDIREKLAVPEAEWNLASAKLCEYPNIQEAAVLSTCNRFEVYVAAADSHAAIRDVMTHLQEHSGLSQAELRQNLFMLSREDAVWHLLKVSAGLDSLVVGEGQILSQVRQCYLHGTEQDGSAGKVVARMLNTAVSAGKRARSETSISKGAVSISSAAAEFSKMRADKDVGKKLVDSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELAEEFPDIEMDVRLGAEDPTELERAITEADIIFTSTSATGCIVAKDQLERLGAGTERPVMFVDISVPRNVESDCDELDGVFAYDVDDLKMVVARNTALRRREMLEAETILQEEHLKFSGWQQSLTATPAISKMQEKFESMRAQEMRKAGNKLQN--LSEKELQVVEKLSQGIVNKMLHGPMSALRQPDGPEEKKQTLKILKDMFKLEK 1899
R+ A+S L VH +GLS H+A V++REKLAVPE +WN AS ++C+ +I EAAVLSTCNRFE+Y AA+D AA+ V L + SGL AELR+NLFMLS +DAVWH+++VS GLDSL+VGEGQILSQVRQC+LH E+DG GKV++R+LN AV+AGKR RSET ISKG+VS+SSAA E S+M + D+ ++ +A++GAG MTRLL+ HL S G++K+ +VNRSM + ELAE+FPD+E++++L +L I +DI++T+TS+ ++ + ++ G RP+M VDISVPRN+ DC + Y+VDDLK VVA+NTA+R+REMLEAE +L+EE + W++SL+A P I+++QE+ S R QE+ KA KL N L++KE++ VE+LS+GIVNK+LHGPM+ LR+ + E K+QTLK L MF+LE+
Sbjct: 90 RLEAASKGLQVHCVGLSIHHADVEVREKLAVPECDWNKASNEICDGGDIAEAAVLSTCNRFEIYYAASDPRAAMASVTKFLADRSGLPVAELRKNLFMLSGDDAVWHIMRVSGGLDSLIVGEGQILSQVRQCHLHSIEEDGCGGKVLSRLLNNAVAAGKRVRSETGISKGSVSVSSAAVELSEMLSLPDLNLPFSEARLAVVGAGTMTRLLITHLASRGLEKITIVNRSMARPEELAEQFPDVEIEIKLM----DDLWDVIGRSDIVYTATSSVEYVIDEQKMMANGLSGGRPLMLVDISVPRNIGEDCKNVPNAKVYNVDDLKAVVAKNTAMRQREMLEAEILLKEEATSYFAWRESLSAIPTINQLQERANSFREQELAKATRKLANANLTDKEMEAVERLSRGIVNKLLHGPMAHLRKTESIEGKQQTLKELNAMFRLEE 528
BLAST of mRNA_C-linearis_contig112.1511.1 vs. uniprot
Match: A0A1Z5JLS3_FISSO (Glutamyl-tRNA reductase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLS3_FISSO) HSP 1 Score: 447 bits (1150), Expect = 1.470e-143 Identity = 240/452 (53.10%), Postives = 333/452 (73.67%), Query Frame = 1
Query: 550 ETKAEKKARRMAASSTPLGVHVIGLSHHNAGVDIREKLAVPEAEWNLASAKLCEYPNIQEAAVLSTCNRFEVYVAAADSHAAIRDVMTHLQEHSGLSQAELRQNLFMLSREDAVWHLLKVSAGLDSLVVGEGQILSQVRQCYLHGTEQDGSAGKVVARMLNTAVSAGKRARSETSISKGAVSISSAAAEFSKMRADKDVGKKLVDSSVAIIGAGKMTRLLLVHLGSLGIKKVILVNRSMPKCTELAEEFPDIEMDVRLGAEDPTELERAITEADIIFTSTSATGCIVAKDQLERLGAGTERPVMFVDISVPRNVESDCDELDGVFAYDVDDLKMVVARNTALRRREMLEAETILQEEHLKFSGWQQSLTATPAISKMQEKFESMRAQEMRKAGNKLQ--NLSEKELQVVEKLSQGIVNKMLHGPMSALRQPDGPEEKKQTLKILKDMFKLEK 1899
ETK + + R+ A++ L VHV+GLS H+A V++REKLA+PEAEWN AS ++C + EAAVLSTCNRFEVY AA D+ AA+ V +L E SG+ + LR+NLFMLS +DAVWH+++V+ GLDSL+VGEGQILSQVRQC+LH E+DG GKV++R+LN AV+AGKR RSET+ISKG+VSISSAA E S+M + KD+ + +A +GAGKMTRLL+ HL S G++K+ +VNRS+ + EL E+FPDI+++++L +L + +DI++T+TS ++ + +L+ G RP+M VDISVPRNV +C+E+ V AY+VDDLK VVARNTA+R+RE+LEAE +LQEE F W+++L+ P I ++QE+ R +E++K +L NLS+KEL+ VE+LS+GIVNK+LHGPM+ LR+ + E K+ TLK L MF LE+
Sbjct: 52 ETKKKTREERLEAATKGLQVHVVGLSIHHAEVEVREKLAIPEAEWNAASNEICANGKVNEAAVLSTCNRFEVYYAATDARAAMAHVTQYLSERSGIPVSALRRNLFMLSGDDAVWHIMRVAGGLDSLIVGEGQILSQVRQCHLHSIEEDGCGGKVLSRLLNNAVAAGKRVRSETAISKGSVSISSAAVELSEMLSMKDLKLPFSECRLAAVGAGKMTRLLITHLASRGLEKITIVNRSLDRPKELQEQFPDIDIEIKLM----DDLWDVVGRSDIVYTATSCVDYVIDEQKLDVNGLVGGRPLMLVDISVPRNVNENCNEIPNVKAYNVDDLKAVVARNTAMRQREILEAEKLLQEEAESFIAWREALSTIPTIYQLQERANEFRQEELKKCTRRLSSANLSDKELEAVERLSRGIVNKLLHGPMAHLRKTESIEGKQATLKELSAMFMLEQ 499 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig112.1511.1 >prot_C-linearis_contig112.1511.1 ID=prot_C-linearis_contig112.1511.1|Name=mRNA_C-linearis_contig112.1511.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=592bp MASTSTPLASAGCPFVRVLYLHFVLLLALFTSCEASTTTPKGGCPLSRLQback to top mRNA from alignment at C-linearis_contig112:78214..84497- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig112.1511.1 ID=mRNA_C-linearis_contig112.1511.1|Name=mRNA_C-linearis_contig112.1511.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6284bp|location=Sequence derived from alignment at C-linearis_contig112:78214..84497- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig112:78214..84497- >mRNA_C-linearis_contig112.1511.1 ID=mRNA_C-linearis_contig112.1511.1|Name=mRNA_C-linearis_contig112.1511.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3552bp|location=Sequence derived from alignment at C-linearis_contig112:78214..84497- (Chordaria linearis ClinC8C monoicous)back to top |