mRNA_C-linearis_contig111.1505.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig111.1505.1 vs. uniprot
Match: D7FL55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL55_ECTSI) HSP 1 Score: 2830 bits (7335), Expect = 0.000e+0 Identity = 1573/2308 (68.15%), Postives = 1765/2308 (76.47%), Query Frame = 1
Query: 46 MAKPLVDSGARLAVRQMGAILKKNALVKAAHWRQTLAEITIPALFMLLLVWIKTTTSVFDSPAASYSCGQTLPWRYEEHLDPDTFEDSPLYQCLQKPDSCRAENYYRDEGGVFEEMGLEDLYPTVGFMDSGVGYPWYGLTVGDDSEVYSDFGHLTGVSAYNPSQDLRTLVDRLYLWGEKTIIAVAPASEQXXXXXXXXXXSR-----------HSGNDDGDESI-GQVESGDVMEAVGSGSETSAAEDFSAWLVDQLGGTGGHFADAVRVFSSEQAVIDYVRSEDYDTPSGIPFSDDATGELSGQPREGEGIGGIGIEVEGGQSRGSQRGQDRRSKVGMAVIFNKAPLEGEVPQWDYTLRLNYTYGVSQFEEQATCLYPGCSLKYKLPSTLVTTSALERPPTSSHLWGYSYSGFLTLQKSVDEFILSRAAGDRMYLNVSVGFFPEQAFRTDQFQQIITSTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALRMMGLPDLAYHSSWFITFQAQWLVTNLLILLVVWDSVFRYSDHWLVFVWLEAVALAVMAFCFLISTFFSRSKTAATLGSIIFFAAFFPYYFVGGNAVTDVATKTWASLFVPTCMALGTDTFAAFEGGLVGVQRSNVRQSYEDRLPYVNMVTMLLIDAALYFVLAWYLDKVVPSEFGTPLPWHFPVSAPIEARRRAK-RSMQQRQEVHSAVNAQ---AARALARRARQLKE-W--ITKGSARDGSVNGGAEDLAMPLLPASS-QRMSSREWVASTGLEGVHTYD---EEGGARVEPVGPQLSQQVVEGRTVSTRGLVKVYANGKAAVKGLNLDLFEGHISVLLGHNGAGKSTAISMVTGTLPPTKGEAYLRGRKLSSDLAGVRRSLGVCFQQNTLFEELTVLQHLKLFAVVKGVRARDVDDEAARMVSEVGLVEKRDTPASALSGGQKRKLSVALAFIGGSEVVVLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIMVEGELRCMGSSMFLKGLYGVGYTLTVMKTDQGDGTGYTSGSIDPWERRASTSSGSFMMRAEMQGGQDSLEALVLEFVPEALTVSKVGKERNYRLPFASASKFVDMFREIDRRKSELGVAGYGVSVTTLEEVFLRVGHGSDEPFLSGDPANRSSVDGTIPRTRLPSVELSPGP------RGRAGSGSAHSSYYSFPSEHGGGRWKAGVGLGVAAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDNEPMIIGGESIHTELGWPPPSLAYTKKRIEGSAAGEADLDIDVDRASQGMFWMHFKALLAKRATYGLRDKKSQFFQLIVPTLLFLLGLILLRLSRNVFDQPSLLLSPGTHFNPGKSSTIRNPVPLDAPRDEPESLASAVADRFDGVSVDGKSVTIPVG---GAEDNFKGCAQGASALVNMSDFLLDAAGPGEQGASRYGAIVLDGSSRLPNSSRLLLPNSRDEDGEEENGEGXXXEERGNVGYWAGSLAYGVLVNASAVHGAPIFMNLVNSAALQAIFASESSGEELESRSGXXXXXXXXXXXXXXXXXXR--------SLPSITVRSSPLPRTKGEEQTRQTIDGFTTAIMVVISMCFLPASYAIFVVKERAVKAKHQQIISGVGVVSYWASTFVFDVASYLIPFVVFLSLLYAFDIQSYTTSEAAGATALLFLFYGPAVAPFTYCISFLFESASSAQTMVLFVNFVTGLALMVVSFVLNLVESTRDVNAKLKWIYRLFPGFCLGDGLAQLVLCEDGKTCVDISSMGRGP-PQKLTPLSWAITGADIASLVVTCIAYLVICLLIEYGSTSPKLLGWSSPDPTTDTNSDXXXXXXDVAAEARRVERMGMGGTLGDMEGGGQVILNNLRKVYRTKQGPKVAVQGLSFSVSRGDCFGFLGINGAGKSTTLGILSGDICPTRGQASIAGHDILTEQTKLRRYIGYCPQDDALLDLLTVEEHLLLYARIKGVKKTRLKDVADQKMQEMDLTPFRSVKACELSGGNKRKLSVAIAMIGNPRVVFLDEPSTGMDPIARRFMWDIISRMTTTDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADIKMRPPSNAEAVEVMQRIVKEDVDNLVGDELNSSRLRPPLENCCRRLERGDSDSGSTRAGTLEAALNDGSGAFLFDVLGSEGGTLPTRLFIDWYLCEERINDLNAFLEKTFPGAELVERPTLFSCRYKIPHQDGMNLADVFGHFEAAKAKLGLASYAVGQTTLEQIFNGFAASKDNPEVMLRQGQRSCHVM 6846
MA+P DSGARLA RQMGAILKKNAL+K A WRQTLAE+TIPALFMLLLVWIK+ T+V+DSPA +Y+CGQT+PW+YEE LDP T SPL++CLQKP C AENYYRDEGG FEEMGL L+PTVG+MDSG G+PWYG TVGD+SE + DF H+TGV A NPSQDL TL RL G +T+IAVAPA EQ + +SG G E+ G + G +G+G+E AAE+FS+WL+D+LGG G AD V++FSSEQA+IDYVRS DYD S P ++A E S G+ G G + GGQ + KVGMA+IFNKAPLEGEVP+WDYTLRLNYTYGVSQ ++Q VTTSALERPPTS H+WGYSYSGFL+LQKSVDEFILS+AAG+RMYLNVS+G FPEQA+ TDQFQ+II STLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEAL+MMGLPDL YH SW +TFQ QW+VTN+LI+LVV SVFRYS+HWLVF+WLEAVAL+VMAFCFL+STFFSRSKTAATLGS++FFAAFFPYY+VG A++ V TKTWASL PTC+ALG+DTFAAFEGGLVGVQ SN+ QSYED LPYV+MV MLL D+A+YF+LAWYLDKV+PSEFGTPLPWHFPVS P+ ARRR + + QE V+A A R LA R R K W I +GS R + G DL LL SS Q +RE V S+GL GV YD EEGG +VEPVGPQLS+QV EGRTVSTRGLVKVY NGK AVKGL+LDL+EG ISVLLGHNGAGKSTAISM+TGTLPPT+GEAYLRGRKL+SDL G+RRSLGVCFQQNTLF++LTV QHL+LFAVVKGVRARDVDDEAARMVSEVGL+EK+DTPASALSGGQKRKLSVALAFIGGSEV+VLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIM EGELRCMGSS+FLKGLYGVGYTLTV+K D+GDG D WE + S G M+ A+ G+D+LEALVL FVPEALTVSKVGKERNYRLPFAS+S FVDMFREID RK +LGVAGYGVSVTTLEEVFLRVGHG++ S D ++ I PSVELSP P + SGS+++S Y P GGR G +G XXXXXXXX D EP++ + + WP + ++KR GSAA E D DRAS+GMFW+HFKAL+AKR TYG+RDKKSQFFQLIVPTLLFLLGL+LLR SR++FDQPSLLLSP T+FNPGK S +RNPVP+DAP D PESLA VADRFDG+SV+G SV +P G ED F GCAQGAS LV MSDFLL AG EQGASRYGAIVLD SS LP + P R G EE+ + + + GSLAYGVL+NASAVH APIF+NLVNSAALQA+ A G + E R G +LPSIT+RSSPLPRT+GEE RQTIDGFTTAIMVVIS+CFLPASYAIFVVKERAVKAKHQQIISGVG+ +YW+STFVFDV +YLIP VFL LLYAFDI+SYTT+E+A ATALLFL YGPAVAPFTYCISF F+SASSAQ MVLF+NFVTGLALMV SFVLNLVESTRD+NA LKWIYRLFPGFCLGDGLAQLVLC++GKTCVD+ S+GR P++LTP S ITGADIA L+ +C+ DVAAEARRVE M G L D EGGG+VILNNLRKVYRTKQGPKVAVQGLSFSV+RGDCFGFLGINGAGKSTTLGILSGDICPTRG+ASIAGHDILTEQ +LRRYIGYCPQDDALLDLLTVEEHLLLYARIKGV + R+ VA +KMQ+MDLT FR KA ELSGGNKRKLSVAIAMIG+PRVVFLDEPSTGMDPIARRFMWDIISRMTTTDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFG GFEAD+K++PPS + A EVMQ ++ V N++GD+++SSRL PL+ CC L RGD D RA LE AL GSGAFL DVLGSEGGTLPTRLFIDWYLCE+R +DLN FL +TFPGAELVERPTLFSCRYKIP+QDGM LADVF HFEAAKAKLGLASYAVGQTTLEQIFN FA +KDNPEV LRQ S V+
Sbjct: 1 MARPSKDSGARLACRQMGAILKKNALLKMADWRQTLAEVTIPALFMLLLVWIKSLTTVYDSPATNYTCGQTIPWQYEESLDPATMLQSPLFKCLQKPPGCTAENYYRDEGGYFEEMGLIGLFPTVGYMDSGDGFPWYGFTVGDNSEAFDDFRHMTGVKANNPSQDLDTLASRLRNSGPRTVIAVAPAFEQRQGGMDVFSDDKIPSSRGDVASLNSGEGGGGEAKRGSADGG----GMGAGAEMLAAEEFSSWLIDELGGDEGELADVVQLFSSEQALIDYVRSADYDRGSDFPSPNEA--ERSNAADSSIGVTGYGG-MSGGQLSQEVGLRKHPHKVGMAIIFNKAPLEGEVPKWDYTLRLNYTYGVSQLQDQ------------------VTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAGERMYLNVSMGLFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPDLIYHGSWLVTFQVQWVVTNVLIMLVVRTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNMTQSYEDHLPYVSMVAMLLADSAIYFLLAWYLDKVIPSEFGTPLPWHFPVSGPLAARRRRRAKQAPSPQETRGTVDAGITGAGRGLADRLRLGKRRWGGIVRGSGR----STGDNDLRASLLSGSSPQPRVARERVPSSGLNGVMAYDHTDEEGGPKVEPVGPQLSRQVAEGRTVSTRGLVKVYGNGKKAVKGLDLDLYEGQISVLLGHNGAGKSTAISMITGTLPPTRGEAYLRGRKLTSDLVGIRRSLGVCFQQNTLFDQLTVFQHLQLFAVVKGVRARDVDDEAARMVSEVGLMEKKDTPASALSGGQKRKLSVALAFIGGSEVIVLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIMAEGELRCMGSSLFLKGLYGVGYTLTVIKADEGDGXXXXX--XDAWEGQ-SPPPGRLMVAAK--DGKDALEALVLRFVPEALTVSKVGKERNYRLPFASSSNFVDMFREIDFRKEQLGVAGYGVSVTTLEEVFLRVGHGAEMSLPSSDSGLGNTA---ISSPTRPSVELSPDPCPGTPSSTSSVSGSSYNSSYPRP----GGR--EGASGARTSGRQERXXXXXXXXVGAGWREQEDREGHRH-----------AADTEPLLADRDDLTEAEDWPSSDVDTSRKREFGSAAAE-----DRDRASRGMFWVHFKALVAKRTTYGMRDKKSQFFQLIVPTLLFLLGLLLLRSSRSMFDQPSLLLSPATNFNPGKPSRVRNPVPMDAPED-PESLARQVADRFDGISVEGTSVLLPPGEGPSLEDQFGGCAQGASPLVYMSDFLLQGAGADEQGASRYGAIVLDNSSCLP----TMTPRQRL--GLEEDRYLHGLFQNHSTNHSDGSLAYGVLINASAVHAAPIFVNLVNSAALQAVVAD---GGDTEGREGVAVGGERSNAGEEKTAAAXXXXXTADTALPSITIRSSPLPRTRGEELARQTIDGFTTAIMVVISICFLPASYAIFVVKERAVKAKHQQIISGVGIAAYWSSTFVFDVVTYLIPCSVFLGLLYAFDIESYTTNESASATALLFLLYGPAVAPFTYCISFFFKSASSAQNMVLFINFVTGLALMVTSFVLNLVESTRDINASLKWIYRLFPGFCLGDGLAQLVLCKNGKTCVDVLSLGRDRVPKELTPFSAIITGADIACLMASCVE-----------------------------------DDEDVAAEARRVEEME--GVLRDGEGGGEVILNNLRKVYRTKQGPKVAVQGLSFSVARGDCFGFLGINGAGKSTTLGILSGDICPTRGKASIAGHDILTEQNQLRRYIGYCPQDDALLDLLTVEEHLLLYARIKGVNENRIGHVAGEKMQQMDLTSFRETKAFELSGGNKRKLSVAIAMIGDPRVVFLDEPSTGMDPIARRFMWDIISRMTTTDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGSGFEADMKLQPPSTSAATEVMQLLMAHGVANIIGDDIDSSRLWGPLDICCDGLARGDFD----RAEALETALKSGSGAFLQDVLGSEGGTLPTRLFIDWYLCEQRADDLNVFLAETFPGAELVERPTLFSCRYKIPYQDGMKLADVFEHFEAAKAKLGLASYAVGQTTLEQIFNSFAVTKDNPEVRLRQTNESEDVV 2198
BLAST of mRNA_C-linearis_contig111.1505.1 vs. uniprot
Match: A0A6H5J6A2_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6A2_9PHAE) HSP 1 Score: 1904 bits (4933), Expect = 0.000e+0 Identity = 1071/1635 (65.50%), Postives = 1214/1635 (74.25%), Query Frame = 1
Query: 46 MAKPLVDSGARLAVRQMGAILKKNALVKAAHWRQTLAEITIPALFMLLLVWIKTTTSVFDSPAASYSCGQTLPWRYEEHLDPDTFEDSPLYQCLQKPDSCRAENYYRDEGGVFEEMGLEDLYPTVGFMDSGVGYPWYGLTVGDDSEVYSDFGHLTGVSAYNPSQDLRTLVDRLYLWGEKTIIAVAPASEQXXXXXXXXXXSR-----------HSGNDDGDESIGQVESGDVMEAVGSGSETSAAEDFSAWLVDQLGGTGGHFADAVRVFSSEQAVIDYVRSEDYDTPSGIPFSDDATGELSGQPREGEGIGGIGIEVEGGQSRGSQRGQDRRSKVGMAVIFNKAPLEGEVPQWDYTLRLNYTYGVSQFEEQATCLYPGCSLKYKLPSTLVTTSALERPPTSSHLWGYSYSGFLTLQKSVDEFILSRAAGDRMYLNVSVGFFPEQAFRTDQFQQIITSTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALRMMGLPDLAYHSSWFITFQAQWLVTNLLILLVVWDSVFRYSDHWLVFVWLEAVALAVMAFCFLISTFFSRSKTAATLGSIIFFAAFFPYYFVGGNAVTDVATKTWASLFVPTCMALGTDTFAAFEGGLVGVQRSNVRQSYEDRLPYVNMVTMLLIDAALYFVLAWYLDKVVPSEFGTPLPWHFPVSAPIEARRR--AKR--SMQQRQEVHSAVNAQAARALARRARQLKE-WITKGSARDGSVNGGAEDLAMPLLPASS-QRMSSREWVASTGLEGVHTYD---EEGGARVEPVGPQLSQQVVEGRTVSTRGLVKVYANGKAAVKGLNLDLFEGHISVLLGHNGAGKSTAISMVTGTLPPTKGEAYLRGRKLSSDLAGVRRSLGVCFQQNTLFEELTVLQHLKLFAVVKGVRARDVDDEAARMVSEVGLVEKRDTPASALSGGQKRKLSVALAFIGGSEVVVLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIMVEGELRCMGSSMFLKGLYGVGYTLTVMKTDQGDGTGYTSGSIDPWERRASTSSGSFMMRAEMQGGQDSLEALVLEFVPEALTVSKVGKERNYRLPFASASKFVDMFREIDRRKSELGVAGYGVSVTTLEEVFLRVGHGSDEPFLSGDPANRSSVDGTIPRTRLPSVELSPGP------RGRAGSGSAHSSYYSFPSEHGGGRWKAGVGLGVAAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDNEPMIIGGESIHTELGWPPPSLAYTKKRIEGSAAGEADLDIDVDRASQGMFWMHFKALLAKRATYGLRDKKSQFFQLIVPTLLFLLGLILLRLSRNVFDQPSLLLSPGTHFNPGKSSTIRNPVPLDAPRDEPESLASAVADRFDGVSVDGKSVTIPVG---GAEDNFKGCAQGASALVNMSDFLLDAAGPGEQGASRYGAIVLDGSSRLPNSS---RLLLPNSRDEDGEEENGEGXXXEERGNVGYWAGSLAYGVLVNASAVHGAPIFMNLVNSAALQAIFAS--ESSGEELESRSGXXXXXXXXXXXXXXXXXXRSLPSITVRSSPLPRTKGEEQTRQTIDGFTTAIMVVISMCFLPASYAIFVVKERAVKAKHQQ 4848
MA+P DSGARLA RQMGAILKKNAL+K A WRQT+AE+TIPALFMLLLVWIK+ T+V+DSPA +Y+CGQT+PW+YEE LDP T SPL++CLQKP C AENYYRDEGG FEEMGL L+PTVG++DSGVG+PWYG TVGD+SE + DF H+TGV A NPSQDL TL RL G +T+IAVAPA EQ R +SG G E+ G M A G+E AA++FS+WL+D+LGG G AD V++FSSEQA+IDYVRS DYD S P ++A E S G+ G G + GGQ + KVGMAVIFNKAPLEGEVP+WDYTLRLNYTYGVSQ ++QATCLY GC + YKLPSTLVTTSALERPPTS H+WGYSYSGFL+LQKSVDEFILS+AAG+RMYLNVS+ FPEQA+ TDQFQ+II STLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEAL+MMGL DL YH SW +TFQ QW+VTN+LI+LVV SVFRYS+HWLVF+WLEAVAL+VMAFCFL+STFFSRSKTAATLGS++FFAAFFPYY+VG A++ V TKTWASL PTC+ALG+DTFAAFEGGLVGVQ SN+ QSYED LPYV MV MLL D+A+YF+LAWYLDKV+PSEFGTPLPWHFPVS P+ ARRR AK+ S Q+ +E A A R LA R R K W G RDG + G DL LL SS Q +RE V S+GL GV YD EEGG +VEPVGPQLS+QV EGRTVSTRGLVKVY NGK AVKGL+LDL+EG ISVLLGHNGAGKSTAISM+TGTLPPT+GEAYLRGRKL+SDL G+RRSLGVCFQQNTLF++LTV QHL+LFAVVKGVRARDVDDEA RMVSEVGL+EK+DTPASALSGGQKRKLSVALAFIGGSEV+VLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIM EG LRCMGSS+FLKGLYGVGYTLTV+K D+GDG D WE + S G M + G D+LEALVL FVPEALTVSKVGKERNYRLPFAS+S FVDMFREID RK +LGVAGYGVSVTTLEEVFLRVGHG++ P S D ++ I PSVELSP P + SGS+++S Y P + G +G XXXX D EP++ + + WP + + KR GSAA E D DRAS+GMFW+HFKAL+AKRATYG+RDKKSQFFQLIVPTLLFLLGL+LLR SR++FDQPSLLLSP T+FNPGK S +RNPVP+DAP D PESLA VADRFDG+SV+G S+ +P G ED F GCAQGAS LV MSDFLL AG EQGASRYGAIVLD SS LP + RL L R G +N + + GSLAYGVL+NASAVH APIF+NLVNSAALQA+ A ++ G E + +LPSIT+RSSPLPRT+GEE RQTIDGFTTAIMVVIS+CFLPASYAIFVVKERAVKAKHQQ
Sbjct: 1 MARPSKDSGARLACRQMGAILKKNALLKMADWRQTVAEVTIPALFMLLLVWIKSLTTVYDSPATNYTCGQTIPWQYEESLDPATMLQSPLFKCLQKPPGCTAENYYRDEGGYFEEMGLIGLFPTVGYIDSGVGFPWYGFTVGDNSEAFDDFRHVTGVMASNPSQDLDTLASRLRNSGPRTVIAVAPAFEQGQGGINVFSDERIPSSRGYVASLNSGEGGGGEAKRGSADGGGMRA---GAEMLAAKEFSSWLIDELGGDEGDLADVVQLFSSEQALIDYVRSADYDRGSDFPSPNEA--EKSNAADSSIGVPGYGA-MSGGQLSQEVGLRKHPHKVGMAVIFNKAPLEGEVPKWDYTLRLNYTYGVSQLQDQATCLYVGCKVTYKLPSTLVTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAGERMYLNVSMALFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLSDLIYHGSWLVTFQVQWVVTNVLIMLVVRTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNMTQSYEDHLPYVFMVAMLLADSAIYFLLAWYLDKVIPSEFGTPLPWHFPVSGPLAARRRRQAKQAPSPQETRETVDAGITGAGRGLADRLRLGKRRW--GGIVRDGGRSTGDNDLRASLLSGSSPQPRVARERVPSSGLNGVMAYDDTDEEGGPKVEPVGPQLSRQVAEGRTVSTRGLVKVYGNGKKAVKGLDLDLYEGQISVLLGHNGAGKSTAISMITGTLPPTRGEAYLRGRKLTSDLVGIRRSLGVCFQQNTLFDQLTVFQHLQLFAVVKGVRARDVDDEAVRMVSEVGLLEKKDTPASALSGGQKRKLSVALAFIGGSEVIVLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIMAEGGLRCMGSSLFLKGLYGVGYTLTVIKADKGDGXXXXX--XDAWEGQ-SPPPGRLMAAKD---GNDALEALVLRFVPEALTVSKVGKERNYRLPFASSSNFVDMFREIDSRKEQLGVAGYGVSVTTLEEVFLRVGHGAEMPLPSSDSGVGNAA---ISSPTRPSVELSPDPCPGTPSSTSSVSGSSYNSSYPQPGR------REGASGATTSGRQEKGESXXXXAVGAGWREQEDREGNRHAV-----------DTEPLLADRDGMAEAEDWPSSDMDTSGKREFGSAAAE-----DRDRASRGMFWVHFKALVAKRATYGMRDKKSQFFQLIVPTLLFLLGLLLLRSSRSMFDQPSLLLSPATNFNPGKPSRVRNPVPMDAPED-PESLARKVADRFDGISVEGTSILLPPGEGPSIEDQFGGCAQGASPLVYMSDFLLQGAGADEQGASRYGAIVLDNSSCLPTMTPRQRLGLKEDRYLHGLFQNH---------STNHSDGSLAYGVLINASAVHAAPIFVNLVNSAALQAVVADSGDTKGREGVAVGEERSDAGEEKTAAAAAAADTALPSITIRSSPLPRTRGEELARQTIDGFTTAIMVVISICFLPASYAIFVVKERAVKAKHQQ 1586
BLAST of mRNA_C-linearis_contig111.1505.1 vs. uniprot
Match: A0A835ZC34_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC34_9STRA) HSP 1 Score: 1390 bits (3599), Expect = 0.000e+0 Identity = 1021/2516 (40.58%), Postives = 1274/2516 (50.64%), Query Frame = 1
Query: 181 MLLLVWIKTTTSVFDSPAASYSCGQTLPWRYEEHLDPDTFEDSPLYQCLQKPDSCRAENYYRDEGGVFEEMGLEDLYPTVGFMDSGVGYPWYGLTVGDDSEVYSDFGHLTGVSAYNPSQDLRTLVDRLYLWGEKTIIAVAPASEQXXXXXXXXXXSRHSGNDDGDESIGQVESGDVMEAVGSGSETSAAEDFSAWLVDQLGGTGGHFADAVRVFSSEQAVIDYVRSEDYDTPSGIPFSDDATGELSGQPREGEGIGGIGIEVEGGQSRGSQRGQDRRSKVGMAVIFNKAP------------------------------------------------------------------------------------------LEGEVPQWDYTLRLNYTYGVSQFEEQATCLYPGCSLKYK-LPST-LVTTSALERPPTSSHLWGYSYSGFLTLQKSVDEFILSRAAG--DRMYLNVSVGFFPEQAFRTDQFQQIITSTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALRMMGLPDLAYHSSWFITFQAQWLVTNLLILLVVWDSVFRYSDHWLVFVWLEAVALAVMAFCFLISTFFSRSKTAATLGSIIFFAAFFPYYFVGGNAVTD-VATKTWASLFVPTCMALGTDTFAAFEGGLVGVQRSNVRQSYEDRLPYVNMVTMLLIDAALYFVLAWYLD----------KVVPSEFGTPLPWHFPVSAPIEARRRAKRSMQQRQEVHSAVNAQAARALARRARQLKEWITKG-----SARDGSVNGGAEDLAMPLLPASSQRMSSREWVASTGLEGVHTYDEEGGARVEPVGPQLSQQVVEGRTVSTRGLVKVYANGKAAVKGLNLDLFEGHISVLLGHNGAGKSTAISMVTGTLPPTKGEAYLRGRKLSSDLAGVRRSLGVCFQQNTLFEELTVLQHLKLFAVVKGVRARDVDDEAARMVSEVGLVEKRDTPASALSGGQKRKLSVALAFIGGSEVVVLDE---------------------PTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDR-----------------------IAIMVEGELRCMGSSMFLKGLYGVGYTLTVMKTDQGDGTGYTSGSI----------DPWERRASTS--------------SGSFMMRAEMQGGQDS--LEALVLEFVPEALTVSKVGKERNYRLPFASASKFVDMFREIDRRKSELGVAGYGVSVTTLEEVFLRVGHGSDEPFLSGDPANRSSVDGTIPRTRLPSVELSPGPRGRAGSGSAHSSYYSFPSEHGGGRWKAGVGLGVAAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDNEPMIIGGESIHTELGWPPPSLAYTKKRIEGSAAGEADLDIDVDRASQGMFWMHFKALLAKRATYGLRDKKSQFFQLIVPTLLFLLGLILLRLSRNVFDQPSLLLSPGTHFNPGKSSTIRNPVPLDAPRDEPESLASAVADRFDGVSVDGKSVTIPVGGAE---DNFKGCAQGASALVNMSDFLLDA-AGPGEQGASRYGAIVLDGSSRLPNSSRLLLPNSRDEDGEEENGEGXXXEERGNVGYWAGSLAYGVLVNASAVHGAPIFMNLVNSAALQAIFASESSGEELESRSGXXXXXXXXXXXXXXXXXXRSLPSITVRSSPLPRTKGEEQTRQTIDGFTTAIMVVISMCFLPASYAIFVVKERAVKAKHQQIISGVGVVSYWASTFVFDVASYLIPFV-----------------------VFLSLLYAFDIQSYTTSE---------------------------AAGATALL---------------------FLFYGPAVAPFTYCISFLFESASSAQTMVLFVNFVTGLALMVVSFVLNLVESTRDVNAKLKWIY-------------RLFPGFCLGDGLAQLVLCEDGKTCVDISSMGRGPPQKLTPLSWAITGADIASLVVTCIAYLVICLLIEYGSTSPKLLGWSSPDPTTDTNSDXXXXXXDVAAEARRVERMGMGGTLGDMEGGGQ----VILNNLRKVYRTKQGP-----------KVAVQGLSFSVSRGDCFGFLGINGAGKSTTLG---------ILSGDICPTRGQASIAGHDILTEQTKLRRYIGYCPQDDALLDLLTVEEHLLLYARIKGVKKTRLKDVADQKMQEMDLTPFRSVKACELSGGNKRKLSVAIAMIGNPRVVFLDEPSTGMDPIARRFMWDIISRMTT--------TDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADIKMRPPSNAEAVEVMQRIVKED--VDNLVGDELNSSRLRPPLENCCRRL-ERGDSDSGS---TRAGTLEAALNDGSGAFLFDVLGSEGGTLPTRLFIDWYLCEERINDLNAFLEKTFPGAELVERPTLFSCRYKIPHQDGMNLADVFGHFEAAKAKLGLASYAVGQTTLEQIFNGFAASKDNPEV 6810
M LLVWIK+ T+VFDSP+ +Y CGQ PW+Y+ HL+P + CL+KP C NYY D+ G+ + D+Y + G+M YP+Y TV D S +Y + LTG YNPS +L T+ RL G++ IAVA + +AA F+ L +L VR F+SE A+ YV +YD+P + KVG AV+FN+AP WDYTLR N+TY V +TCLY C + LP T L TS L RPP+++ +GY SGFL Q+ VDE+++ AAG + L S FFPE+A+RTDQFQQ+I STLGI YMLAFLYPVSR VR+LV+EKE R+KE L+MMGL D Y SW IT Q L+T++ ILLVV SVF YSD LV +WL AV+LA+ AFCFLI+TFFSR+KTAATLGSI+FFA FFPY++VGG A AT+ A L PT +ALG DTFAA+EGGLVG+Q N ++YE RL Y V +LL DAALY +LAWYL+ KV+P E+GT LPW FP W G S + G +GG DL PLL + W T ARVEPVG L +Q+ +GR VS RGL KVY +GK AV LNLDLFEGHISVLLGHNGAGKSTAIS++TG LP T GE +RGR+ ++ G LGVC Q + L LTV QHL+L+ VKGV D+ D A ++ EVGL EK PA +LSGGQKRKLSVA+A IG S+VVVLDE PTSGMDP+SRRSTW VL R RKGRV+LLTTHFMDEAD L IAIM EG L+C+GSS+FLK YG GYT+T T + T + + + D +R S SGS A GG DS L LV +P A +S G E + RLP ASA+ + ++ R+ GVA G+SVTTLEE R V + + R V + RAG G A ++ XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX E+ P+ E+G GE + HF AL KR YGLRDKKS FQLI+PTLLFLLGL+LLR FDQPSL LSP FN RNP PL D + A AVA F+ +VD + + + AE D F CAQGA+ LV MS+FLL AG E+GASRYGAI L E+ N +++Y V+VNASA H AP F NLV++AALQA+ + +S + XXXXXXXXX VR+ PLPRT+ E+Q R +D FT A+MVVI++CF+PASYAI VVKER VKAKHQQ++SGV +YWAST+ D S++ + L+L+Y F I +YT + A AT LL YGPAVAPFTYC+SF F+S SSAQ +VL +NF+TGLALMV SFVL+L++STR N +L+W Y RLFPGFCLGDGLAQLVLC DG TC + + P + + GADIA L C+ Y I L IE + P+L W PD DVAAEA+RV + D +GGG+ V + LRKVY G K AV+ LS V RG+CFG LGINGAGK+T L +LSG++ P+ G A + G D+ T+Q ++RR +GYCPQ DALL+LLT EHL LYARIKGV + L+ K++++ LT F + A +LSGGNKRKLSVA+A +G+P V FLDEPSTGMDP+A+R MW +IS + ++ + ILTTHSMEEAE+LC +GIMVN RLRCLG+ Q LK RFGRG+E D+K P+ E + + + ++ D ++RL PPLE CC L + G + SG+ T A A GSG LF+V +EGG +P +LF DW+ E LNAF+ GAELVER +L S RYK+P DG L+++F E AKA +G+A Y++GQ TLE IFN FAA +DNPE+
Sbjct: 1 MGLLVWIKSVTTVFDSPSVAYVCGQAPPWQYDSHLNPF---GGGILSCLRKPAECTTPNYYTDDWGIGAALNKTDIYTSYGYMPGADRYPFYAFTVEDGSSIYEEAEALTGFQLYNPSLELLTVARRLKFNGQENFIAVASRDNAPP------------------------------------AAAAAARLFAEHLSSRLTDGDARLKGIVRAFASETAIEQYVSDANYDSPGSV-------------------------------------------KVGFAVVFNEAPPALARAEEAWSAXXXXXXXXXXXXXXXXXXXXXXXXGLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDWDYTLRFNFTYAVDLLSRSSTCLYGMCDGGGEGLPGTRLPPTSPLLRPPSAAAAFGYGRSGFLAAQRWVDEWVVGVAAGGGQGVSLKGSFAFFPERAYRTDQFQQVIASTLGIMYMLAFLYPVSRMVRLLVTEKESRIKEGLKMMGLSDAIYQLSWLITMLVQLLITDVAILLVVRSSVFNYSDKALVMLWLFAVSLAITAFCFLIATFFSRAKTAATLGSILFFATFFPYFYVGGAAQAGGAATRALAGLLAPTALALGGDTFAAWEGGLVGIQWGNAFEAYEGRLSYAAAVALLLGDAALYGLLAWYLEXXXXXXXXXXKVLPKEYGTQLPWTFPFLPSY-------------------------------------WRPGGGGGARSVKSGDGDGG--DLQEPLLRGDA-------WAQDT-------------ARVEPVGADLKRQIHDGRAVSLRGLRKVYGDGKVAVHHLNLDLFEGHISVLLGHNGAGKSTAISVLTGLLPATAGEVIVRGRRGTA--GGPAGGLGVCPQHDALLPALTVAQHLRLYGAVKGVAWGDLGDAAYKLACEVGLREKWGQPAGSLSGGQKRKLSVAIALIGDSKVVVLDEQXXXXXXXXXXXXXXXXXXXXPTSGMDPYSRRSTWGVLMRHRKGRVVLLTTHFMDEADVLXXXXXXXXXXXXXXXXXEQSIVQDMMIAIMAEGRLQCLGSSLFLKRTYGAGYTMT---TSTDNDTMFLACLLQVXXXXXXXXDARQRSNSVXXXXXXXXXXXXXXHSGSGAGDALESGGLDSGALTRLVKSHIPAADRLSSAGGELSLRLPLASAAALPPLLEALEARQRSGGVASVGLSVTTLEEXXXXXXX--XXXXXXXXXXWRRYVSAVVYKGRK-RVFM------RAG----------------GAALDAADAAALSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWAFKREXXXXXAEELVPL--------AEMGX-----------XXXXXXGERGXXXXXXXXRVRRWRTHFGALFRKRVIYGLRDKKSLCFQLIIPTLLFLLGLVLLRAGSASFDQPSLELSPHDMFNTRLPPNARNPTPLLRLSDS--ATARAVAAAFEHGAVDAQPLLLSADDAEAVTDQFASCAQGAAPLVAMSNFLLGVPAGEDERGASRYGAITLS-------------------------------EDTVND-----TISYNVMVNASARHAAPAFANLVHTAALQAMAPNATSPPTITXXXXXXXXXXXXX----------------VRNYPLPRTQLEKQARAVLDAFTAAMMVVIAVCFIPASYAIIVVKEREVKAKHQQLVSGVSAAAYWASTYALDALSHVXXXXXXXXXXXXXXXXXXXXXXXXXXXLCLALIYIFQIPAYTKGQXXXXXXXQNLPAXXXXXXXXXXXXXQGVAAATLLLATXXXXXXXXXXXXXXXXXXXXXLYGPAVAPFTYCLSFAFDSHSSAQNVVLLLNFLTGLALMVTSFVLSLLDSTRATNLRLRWFYSMXXXXXXXXXXXRLFPGFCLGDGLAQLVLCTDGHTCPKLDPDTGFSLETQGPFAPDVAGADIAFLAAECVVYFAITLAIEAALSYPRLASWLQPDDP------------DVAAEAQRVLHLPPYDNDNDDDGGGKDEDVVRIVGLRKVYLQGVGVPTACGGGGARGKQAVRELSLGVRRGECFGLLGINGAGKTTALATLSKXXXXXMLSGEVAPSAGAAFVCGADVATQQGRVRRALGYCPQFDALLELLTAREHLQLYARIKGVPEDELEGAVQAKLRQLGLTAFETTLAGQLSGGNKRKLSVAVATLGDPDVCFLDEPSTGMDPLAKRRMWKVISEEVSGTGGYGGYAGKQRACILTTHSMEEAEALCQRMGIMVNARLRCLGTAQRLKDRFGRGYEVDVKTALPNEEELQTIASALHRAGCVASAVIND---ATRLSPPLERCCDALVQAGMAGSGAQDQTNAAFTAALAPGGSGHHLFEVAAAEGGDMPLQLFCDWWASENNFQRLNAFMASALQGAELVERRSLRSARYKVPIFDGQRLSNMFRALEGAKASVGIAEYSIGQQTLESIFNAFAAKQDNPEL 2257
BLAST of mRNA_C-linearis_contig111.1505.1 vs. uniprot
Match: A0A4D9D786_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D786_9STRA) HSP 1 Score: 1231 bits (3185), Expect = 0.000e+0 Identity = 845/2297 (36.79%), Postives = 1194/2297 (51.98%), Query Frame = 1
Query: 91 QMGAILKKNALVKAAHWRQTLAEITIPALFMLLLVWIKTTTSVFDSPAASYSCGQTLPWRYEEHLDPDTFEDSPLYQCLQKPDSCRAENYYRDEGGVFEEMGLEDLYPTVGFMDSGVGYPWYGLTVGDDSEVYSDFGHLTGVS-----AYNPSQDLRTLVDRLYLWGEKTIIAVAPASEQXXXXXXXXXXSRHSGNDDGDESIGQVESGDVMEAVGSGSETSAAEDFSAWLVDQLGGTGGHFADAVRVFSSEQAVIDYVRSEDYDTPSGIPFSDDATGELSGQPREGEGIGGIGIEVEGGQSRGSQRGQDRRSKVGMAVIFNKAPLEGEVPQWDYTLRLNYTYGVSQFEEQATCLYPGCSLKYKLPSTLVTTSALERPPTSSHLWGYSYSGFLTLQKSVDEFILSRAAG-DRMYLNVSVGFFPEQAFRTDQFQQIITSTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALRMMGLPDLAYHSSWFITFQAQWLVTNLLILLVVWDSVFRYSDHWLVFVWLEAVALAVMAFCFLISTFFSRSKTAATLGSIIFFAAFFPYYFVGGNAVTDVATKTWASLFVPTCMALGTDTFAAFEGGLVGVQRSNV-RQSYEDRLPYVNMVTMLLIDAALYFVLAWYLDKVVPSEFGTPLPWHFPVSAPIEARRRAKRSMQQRQEVHSAVNAQAARALARRARQLKEWITKGSARDGSVNGGAEDLAMPLLPASSQRMSSREWVASTGLEGVHTYDEEGGARVEPVGPQLSQQVVEGRTVSTRGLVKVYAN---GKAAVKGLNLDLFEGHISVLLGHNGAGKSTAISMVTGTLPPTKGEAYLRGRKLSSDLAGVRRSLGVCFQQNTLFEELTVLQHLKLFAVVKGVR-ARDVDDEAARMVSEVGLVEKRDTPASALSGGQKRKLSVALAFIGGSEVVVLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIMVEGELRCMGSSMFLKGLYGVGYTLTVMKTDQGDGTGYTSGSIDPWERRASTSSGSFMMRAEMQGGQDSLEALVLEFVPEALTVSKVGKERNYRLPFASASKFVDMFREIDRRKS--ELGVAGYGVSVTTLEEVFLRVGHGSDEPFLSGDPANRSSVDGTIPRTRLPSVELSPGPRGRAGSGSAHSSYYSFPSEHGGGRWKAGVGLGVAAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDNEPMIIGGESIHTELGWPPPSLAYTKKRIEGSAAGEADLDIDVDRASQGMFWMHFKALLAKRATYGLRDKKSQFFQLIVPTLLFLLGLILLRLSRNVFDQPSLLLSPGTHFNPGKSSTIRNPVPLDAPRDEPESLAS-AVADRFD------GVSVDGKSVTIPVGGAEDNFKGCAQGASALVNMSDFLLDAAGPGEQG-ASRYGAIVLDGSSRLPNSSRLLLPNSRDEDGEEENGEGXXXEERGNVGYWAGSLAYGVLVNASAVHGAPIFMNLVNSAALQAIFASESSGEELESRSGXXXXXXXXXXXXXXXXXXRSLPSITVRSSPLPRTKGEEQTRQTIDGFTTAIMVVISMCFLPASYAIFVVKERAVKAKHQQIISGVGVVSYWASTFVFDVASYLIPFVVFLSLLYAFDIQSYTTSEAAGATALLFLFYGPAVAPFTYCISFLFESASSAQTMVLFVNFVTGLALMVVSFVLNLVESTRDVNAKLKWIYRLFPGFCLGDGLAQLVLCEDGKTCVDISSMGRGPPQKLTPLSWAITGADIASLVVTCIAYLVICLLIEYGSTSPKLLGWSSPDPTTDTNSDXXXXXXDVAAEARRVERMGMGGTLGDMEGGGQ--------------------------VILNNLRKVYRTKQGPKVAVQGLSFSVSRGDCFGFLGINGAGKSTTLGILSGDICPTRGQASIAGHDILTEQTKLRRYIGYCPQDDALLDLLTVEEHLLLYARIKGVKKTRLKDVADQKMQEMDLTPFRSVKACELSGGNKRKLSVAIAMIGNPRVVFLDEPSTGMDPIARRFMWDIISRMTTTDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADIKMRPPSNAEAVEVMQRIVKEDVDNLVGDELNSSR--LRPPLENCCRRLERGDSDSGSTRAGTLEAALNDGSGAFLFDVLGSEGGTLPTRLFIDWYLCEERINDLNAFLEKTF-PGAELVERPTLFSCRYKIP-----HQDG---------MNLADVFGHFEAAKAKLGLASYAVGQTTLEQIFNGFAA 6789
Q+ AIL KN L+K HW T E+ IP F+ LLVWIKT + D+P +Y+CGQT + + PL QCLQ PD+C YYR E + L Y G+ SG GYP+Y LTVGDDS++Y L + A NPS L + + K ++ V PA+ S S +A + L+D L G +A+ S+ A+ V ++ Y+ +G+ KV A++ N+ G P+WDY++R+N+T +E CL+ C+ +Y +P+T + +P + L+GY+Y+ F TLQK+VD+FIL+ A+ + +S+G FPE AF +D F +I ++L +F++LAFLYPVSR +R LV EKE ++KE +++MGL A + SW +T AQ VT L+ L+ + F YS+ +L+F++L +LA++ F FL+STFFS++KTAAT G++IFFA+FFPYY + G V + TK A L PTC+ LG D AAFEGGL+G+Q NV Q E Y V MLL+DA LY +LA YL+ V+PSEFGT LP++FP P R R + R RR R++ + +A + + PLL + + SR + EG+ DEE VE V P L Q EGR++ + L KV+A + AV L++ ++EG I+VLLGHNGAGKST ISM+TG +PPT G+A +RG L+ D+A +R+++G+C Q +TL+ ELTV +HL+++ V+KGVR R + D RM+ EVGL +K +S LSGG KRKLS+ +A IG S+VV+LDEPTSG+D +SRR WSVL+R ++GRV+LL+THFMDEAD LGDRIA+M +G L+ +GSS+FLK YGVGYTL ++K +Q A+ S+ + V VP A +S G E +RLPF+++ F +FREID RK EL ++ YG+SVTTL EVFLR+G D R++ + SP S P + GL A G N P + A + ++ +R H KALL KR Y RD+KSQ L++P +L L GL L++L N Q SL+LSP N RNP P+ A S AS A+ FD +D S + ED F CA GA+ ++ MS +L + A G ASRYGA L NS D Y +L+NASA+HGA ++MNL ++A L+ + S ++ + + P I +R+ PLP T E++ I+ T + V+I + F+ AS AIF+VKE KAKHQQIISG+ +++YW + F +DV S+L + L+L+YAF ++SYTT +A GA LLF+ + PA FTY +F F S S+AQT+VLF+NF+TGL L +VSFVL+L++STR +N KL++++RLFP FC GDGL QL LC D C I++ G + LTPL W +T A+I ++V + Y +I L+IE+ P + ++ P + + E+ GG D+EGG + + L LRKV++T +GPKVAV+GLSF + +G+ FGFLGINGAGK+TTL +LSG+ PT G A +AG+ I TEQ+KLR+ IG+CPQ AL+D+LT EHL L+ARIKG+ + + + KM EMDL F A LSGGN+RK+S+AIA IG+P V+F DEPSTGMDP +RR +WD++S + + ++ S++LTTHSMEEAE+LC I IMV G+LRCLG+ QHLK +FG GFE ++K+R + AE V+Q D L S R P +++ CR R D AG + GSGA ++ ++ +GG +P +W L EE L FL + F G L+ER + + R+ +P ++G ++LAD+F E+ KA + YA+G+T +E IFN A
Sbjct: 7 QLRAILWKNILLKRRHWISTFCEVAIPVFFIGLLVWIKTICTKRDAPNVAYACGQTKGFDFYAPSLSANLTGVPLLQCLQPPDTCVEPGYYRGELTELDPR-LPPFYMEYGYTPSGKGYPFYTLTVGDDSQLYEQVNSLLALQNISALANNPSPTLDQVTQAYFR--SKAVLVVCPAT------------------------------------ASSPSLVAATQSLYTHLLDTLTWVGP-LEEAIVFLPSQAALEANVTAQGYE----------------------DGV-----------------------KVAAAIVVNEVDPRG--PRWDYSVRVNFTQTFETVQETVGCLHAKCAFQYTVPTTQFLVNPFVKPAKADFLFGYTYTAFSTLQKAVDDFILNEASSRGPIETTISLGLFPEPAFHSDDFLTVIAASLALFFVLAFLYPVSRYLRALVLEKETKIKETMKIMGLSSWAANLSWVLTMVAQSTVTVSLMTLLGARTAFSYSNSFLIFLFLLVFSLALVMFVFLVSTFFSKAKTAATAGTVIFFASFFPYYALTGPGVAGIRTKAAACLLAPTCLGLGADVLAAFEGGLMGLQWDNVFLQPAETNFSYAAAVGMLLLDAVLYGLLAAYLEAVLPSEFGTHLPFYFPF-LPSYWRGRMDEEPRGR----------------RRGRRIFGGMLDSNA--------SSERGEPLLTLTEDDILSRGGMGDEH-EGI---DEENAPLVEAVEPALRGQAAEGRSLEIQSLRKVFATTSGNRVAVDRLDMAIYEGQITVLLGHNGAGKSTTISMLTGLVPPTAGDARVRGLSLNHDMARIRQNMGLCPQHDTLWPELTVAEHLEVYGVLKGVRPGRTLKDAVERMIQEVGLQDKAQVESSQLSGGMKRKLSLGMALIGDSKVVLLDEPTSGVDTYSRRQIWSVLERNKRGRVMLLSTHFMDEADMLGDRIAVMADGRLKALGSSLFLKSRYGVGYTLVIVKKEQ-----------------ATPSA--------------PIVEAVRGAVPAAEVISDAGAELAFRLPFSASPVFPGLFREIDARKDHGELQISTYGISVTTLFEVFLRIGE-----------------DRVSTRSKPCAPVASP----------------SLPVQ----------GLDSAEGSASDTG------------------------------------NSPAV---------------------------ATNMDNRNVSFER--------HVKALLVKRYIYAARDRKSQCCLLVLPAILILFGLSLIKLLGNPLIQDSLVLSPNM-LNADLVPEARNPFPVLA-----HSPASRAIMSEFDYDRGLYASYIDVASDSSDDAADEDPFYTCAVGATDVLRMSRYLANTAIARTTGPASRYGA--------------LTFANSTDPT----------------------HYTYNILLNASALHGAGVYMNLASNAILRNLVGSPATTADDQ-------------------------PLIIIRNHPLPLTHEEQRASFLIEANTASTFVLIGLSFISASIAIFIVKEAESKAKHQQIISGISLLAYWLANFAWDVLSWLPSLGITLALMYAFGVKSYTTGQAGGAFVLLFIAFAPAATAFTYVWTFCFSSHSAAQTVVLFINFLTGLVLSIVSFVLSLIDSTRAINLKLRYVFRLFPPFCFGDGLLQLALCVDD-VCPKITAAGISITEPLTPLHWDVTLANIIFMLVEALLYFLITLIIEHARAQPWIAALAAWRPKSWVLGRKTKLGPTRGHTRKSTEKGAQGGAT-DVEGGEEDDYDDEDVKAEAERVLCGESRRVNDVIRLEALRKVFQTARGPKVAVRGLSFGIPKGETFGFLGINGAGKTTTLSMLSGEFPPTSGAAYVAGYSITTEQSKLRKNIGFCPQFSALIDVLTTREHLTLFARIKGLPEPSIPALVVAKMNEMDLLDFADKAAGSLSGGNQRKVSMAIATIGDPSVIFADEPSTGMDPASRRKVWDVLSAIRS--KQSSIVLTTHSMEEAEALCTRIAIMVAGKLRCLGTPQHLKSKFGEGFELEVKVRASTPAELAGVVQ------------DRLGSRRSLTLPDVKDACRAWGRPD------WAGLV---CETGSGAIIWAIV-RDGGEVPALTLAEWLLAEESAERLCEFLTEQFGTGVRLIERASWLTSRFSLPARASSSEEGGGGRGCTGPLSLADMFERLESGKAMCSIIEYALGETQIEVIFNRLCA 1949
BLAST of mRNA_C-linearis_contig111.1505.1 vs. uniprot
Match: A0A1Y1HQP2_KLENI (ABC transporter A family n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HQP2_KLENI) HSP 1 Score: 1009 bits (2610), Expect = 0.000e+0 Identity = 729/2046 (35.63%), Postives = 1015/2046 (49.61%), Query Frame = 1
Query: 1027 AVIFNKAPLEGEVPQWDYTLRLNYTYGVSQFEEQATCLYPGCSLKYKLPSTLVTTSALERPPTSSHLWGYSYSGFLTLQKSVDEFIL--------SRAAGDRMYLN----------VSVGFFPEQAFRTDQFQQIITSTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALRMMGLPDLAYHSSWFITFQAQWLVTNLLILLVVWDSVFRYSDHWLVFVWLEAVALAVMAFCFLISTFFSRSKTAATLGSIIFFAAFFPYYFVGGNAVTDVATKTWA----SLFVPTCMALGTDTFAAFEGGLVGVQRSNVRQSYEDRLPYVNMVTMLLIDAALYFVLAWYLDKVVPSEFGTPLPWHFPVS----APIEARRRAKRSMQQRQEVHSAVNAQAARALARRARQLKEWITKGSARDGSVNGGAEDLAMPLLPASSQRMSSREWVASTGLEGVHTYDEEGGARVEP-------VGPQLSQQVVEGRTVSTRGLVKVYANGKAAVKGLNLDLFEGHISVLLGHNGAGKSTAISMVTGTLPPTKGEAYLRGRKLSSDLAGVRRSLGVCFQQNTLFEELTVLQHLKLFAVVKGVRARDVDDEAARMVSEVGLVEKRDTPASALSGGQKRKLSVALAFIGGSEVVVLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIMVEGELRCMGSSMFLKGLYGVGYTLTVMKTDQGDGTGYTSGSIDPWERRASTSSGSFMMRAEMQGGQDSLEALVLEFVPEALTVSKVGKERNYRLPFASASKFVDMFREIDRRKS-ELGVAGYGVSVTTLEEVFLRVGHGSDEPFLSGDPANRSSVDGTIPRTRLPSVELSPGPRGRAGSGSAHSSYYSFPSEHGGGRWKAGVGLGVAAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDNEPMIIGGESIHTELGWPPPSLAYTKKRIEGSAAGEADLDIDVDRASQGMFWMHFKALLAKRATYGLRDKKSQFFQLIVPTLLFLLGLILLRLSRNVFDQPSLLLSPGTH-----FNP---GKSSTIRNPVPLDAPR------------DEPESLASAVADRFDGVSVDGKSVTIPVGGAEDNFKGCAQGASALVNMSDFLLDAAGPGEQGASRYGAIVLDGSSRLPNSSRLLLPNSRDEDGEEENGEGXXXEERGNVGYWAGSLAYGVLVNASAVHGAPIFMNLVNSAALQAIFASESSGEELESRSGXXXXXXXXXXXXXXXXXXRSLPSITVRSSPLPRTKGEEQTRQTIDGFTTAIMVVISMCFLPASYAIFVVKERAVKAKHQQIISGVGVVSYWASTFVFDVASYLIPFVVFLSLLYAFDIQSYTTSEAAGATALLFLFYGPAVAPFTYCISFLFESASSAQTMVLFVNFVTGLALMVVSFVLNLVESTRDVNAKLKWIYRLFPGFCLGDGLAQLVLCEDGKTCVDISSMGRGPPQKLTPLSWAITGADIASLVVTCIAYLVICLLIEY---------------------------------GSTSPKLLGWSSPDPTTDTNSDXXXXXXD----VAAEARRVERMGMGGTLGDMEGGGQVILNNLRKVYRTKQG--PKVAVQGLSFSVSRGDCFGFLGINGAGKSTTLGILSGDICPTRGQASIAGHDILTEQTKLRRYIGYCPQDDALLDLLTVEEHLLLYARIKGVKKTRLKDVADQKMQEMDLTPFRSVKACELSGGNKRKLSVAIAMIGNPRVVFLDEPSTGMDPIARRFMWDIISRMTTTDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADIKMRPPSNAEAVEVMQRIVKE--------------------DVDNLVGDELNSSRLRPPLENCCRRLERGDSDSGSTRAGTLEAALNDGSGAFLFDVLGS------EGGTLPTRLFIDWYLCEERINDLNAFLEKTFPGAELVERPTLFSCRYKIPHQDGMNLADVFGHFEAAKAKLGLASYAVGQTTLEQIFNGFAASKDNPE 6807
AV+F+ P +DY+LRLN+++ S F + T + S L L S + Y+ SGFLTLQ+ VD +I+ R A R+ + V+V FP + D FQ I + + Y+L F++P+SR +R +V EKE R+KE + MMG+ D A +++W IT+ Q+ VT+ +I V W S+F +SD +VF + L+ + CFL+STFFSR++TAA++G++ F AFFPYY + D WA SL PT ALGT FA +E G VG++ SN+ Q + + + M+L+D LY L WY DKV+P E G PW+FP+ AP+ R L E + G R GG+ DL LL S S +W + + + G AR EP VG L +Q E R V GL K + G AV G++L L+EG I+ LLGHNGAGKST I+M+TG +PP+ G+A +RG+ + + + +RR LGVC Q + LF ELTV +HL+LFA +K V + + A M+ VGL +KR A++LSGG KRKLSVA+A +GGS VV+LDEP++GMDP+S+R+ W +L+R + GR ILLTTH M+EAD LGDRIAIM G LR SS++LK +GVGYTLT++K D T ++E + VP A V+ V E +RLP A + F +F ++D + E G+AGYGVSVTTLEEVFLR+ G E N+ S + ++ G +G G A S +E GG + + G P P+L+ A R + MFW H +ALL KR +RD + FQL++P L LLGL LL L P+L P H FN GK T P+ L P +P + S V R D + + P G AL+NMS FL+++ + SRYGA+ L P + +G++ Y +L N +A H AP+++NLVN A L+A AS SI R+ PLP++ + + R+ I F+ +I+V ++ F+PAS+A+ VVKER AK QQ++SGV + SYW ST ++D SYL+P + L+L F + + +E+ TALL L YGPAVA TYC++F F ++AQ VL V+ TGL L + SF+++L+++TR + LK +RLFPGFCL DGL+ L L + G P + L+W ++GA+I L+V Y + LL+++ ++P G P P XXXX D VAAE RVE G G V L+ LRKVY + G KVAVQ LSF + G+CFGFLG+NGAGK+TTLG+L+G++ P+ G A + G+DI T QT RR +GYCPQ D LL+LLT EHL LYARIKGV + L +V + K++E++L V+A LSGGNKRKLSVA AM+G+P ++ LDEPSTGMDP ARRF+WD++SR++ C+V+LTTHSM EA++LC+ IGIM GRLRCLGS QHLK RFG E ++K PS A + +R++ DVD L L+ + P GD D + G A G + S G L + F +W+L E+ + ++AF+ TFPGA L+E T + RY++P + G +LA VF EA +A +G+A Y+VGQTTLE IFN FAA +++ +
Sbjct: 152 AVVFHSTG-----PAYDYSLRLNHSWAPSGFPDLRTIMDTKGSGVNDLFLGLNLISQTQ----------YALSGFLTLQQVVDSYIIFSSQEDSACRGAPSRLLCSRSFHWNLPEHVAVAPFPTPGYTDDSFQAIAKKVMAVLYLLGFMFPISRLLRHMVLEKEDRLKEGMAMMGMTDTAVNTAWLITYGVQFGVTSAVITAVTWSSLFAHSDKSVVFAYFFVFGLSSIGLCFLLSTFFSRARTAASVGALAFLGAFFPYY-----TLVDPQAPGWARVVGSLSSPTAFALGTANFADYEQGHVGLRWSNIFQP-SSGINFGVCLLMMLLDGLLYCGLGWYADKVLPREHGVARPWYFPLLRSYWAPV--------------------------------RPLPEPMRPG--RFSRAAGGSADLEAGLLRQRSVE-SVEQWESGFSSDSGMSDVGRGEAREEPRGEGFEAVGRTLRRQEKEARCVVVSGLRKDFG-GAVAVAGVDLVLYEGQITALLGHNGAGKSTTIAMLTGLVPPSAGDADVRGKSIHTHMDAIRRQLGVCPQHDILFPELTVEEHLQLFATLKDVDRAAIPAQVANMIQSVGLADKRHARAASLSGGMKRKLSVAIALLGGSRVVILDEPSAGMDPYSQRAIWRLLKRSKAGRCILLTTHSMEEADALGDRIAIMSHGMLRAAASSLYLKNRFGVGYTLTLIKKADCDST--------------------------------AIEDTIRRHVPVASLVNDVASELAFRLPLAHTAAFPALFHDLDAAAAAERGIAGYGVSVTTLEEVFLRIARGDAEQ-------NKDSEED----------RMNGGEQGHEGRAEASVSREG-DAERGGAKXX-----------------------------------------------------------------QPGRPGPTLSKVGSSSRWVMA----------RVRRKMFWKHCRALLRKRWLCAVRDVRGCVFQLVIPALFLLLGLTLLLLK----PHPNL---PAVHLDFHEFNGHILGKQPTAPVPINLTFPLANEVSPWLRSGFPQPVTAPSFVFPRADRLLEKAVAAAGPDEGP------------ALLNMSAFLIESRNLTYE--SRYGAV-------------LFGPRTA-----------------------SGAVGYSILHNTTAQHAAPLYINLVNDALLKAAHASRDV-------------------------------SIATRNHPLPQSYSQRRQRRDIGAFSASIIVCVAFAFIPASFAVAVVKERETGAKAQQVLSGVSLTSYWVSTALWDGVSYLLPASLALALFALFGVDEFIGAESLLPTALLLLAYGPAVAALTYCLTFAFTHHAAAQNAVLLVHLFTGLLLSLASFIMSLIKNTRHTSHTLKAFFRLFPGFCLADGLSSLALRQQGLD----------PDLPSSALAWDVSGANIVYLLVEAAVYFSVALLLDHVPPLHHLWYALPAAPAPWSRRAALAPAYSLVPSAPSTPSGPGSLPPSPRLXXXXXXXXXYADEDADVAAERARVE--------GPAGRGSLVRLSGLRKVYPSPGGGPSKVAVQSLSFGIGPGECFGFLGVNGAGKTTTLGMLTGEVAPSDGTAFVVGNDIRTNQTAARRLVGYCPQRDPLLELLTPREHLQLYARIKGVPEKNLPEVVEAKLKELELVGCADVRAGVLSGGNKRKLSVAQAMVGDPPIIILDEPSTGMDPAARRFLWDVVSRLSVRAGRCAVLLTTHSMAEAQALCSTIGIMTAGRLRCLGSPQHLKTRFGAALELEVKAVTPSLAALALLCERVMTSIPALLRYGHEHSQPEDAPASDVDALRAG-LDLAAALPAEAVVAAACALGDEDRAALLLGGDAGAAQQNPGEHDASMTSSVQEQLAHDGWLSVQTFCEWWLVAEQSSAIDAFVRATFPGAALLEH-TAATFRYQLPREGGRSLAQVFAAMEAQRAAVGIAEYSVGQTTLEAIFNNFAARQEDAD 1907
BLAST of mRNA_C-linearis_contig111.1505.1 vs. uniprot
Match: UPI000E6FEAB0 (ABC transporter A family member 1 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FEAB0) HSP 1 Score: 1009 bits (2610), Expect = 0.000e+0 Identity = 742/2019 (36.75%), Postives = 1036/2019 (51.31%), Query Frame = 1
Query: 1015 KVGMAVIFNKAPLEGEVPQ-WDYTLRLNYTYGVSQFEEQATCLYPGCSLKYKLPSTLVTTSALERPPTSSHLWGYSYSGFLTLQKSVDEFILSRAAGD------------RMYL---NVSVGFFPEQAFRTDQFQQIITSTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALRMMGLPDLAYHSSWFITFQAQWLVTNLLILLVVWDSVFRYSDHWLVFVWLEAVALAVMAFCFLISTFFSRSKTAATLGSIIFFAAFFPYYFVGGNAVTDVATKTWASLFVPTCMALGTDTFAAFEGGLVGVQRSNVRQSYEDRLPYVNMVTMLLIDAALYFVLAWYLDKVVPSEFGTPLPWHFPVSAPIEARRRAKRSMQQRQEVHSAVNAQAARALARRARQLKEWITKGSARDGSVNGGAEDLAMPLLPASSQRMSSREWVASTGLEGVHTYDEEGGAR---VEPVGPQLSQQVVEGRTVSTRGLVKVYANGK---AAVKGLNLDLFEGHISVLLGHNGAGKSTAISMVTGTLPPTKGEAYLRGRKLSSDLAGVRRSLGVCFQQNTLFEELTVLQHLKLFAVVKGVRARDVDDEAARMVSEVGLVEKRDTPASALSGGQKRKLSVALAFIGGSEVVVLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIMVEGELRCMGSSMFLKGLYGVGYTLTVMKTDQGDGTGYTSGSIDPWERRASTSSGSFMMRAEMQGGQDSLEALVLEFVPEALTVSKVGKERNYRLPFASASKFVDMFREID---RR------------KSELGVAGYGVSVTTLEEVFLRVGHGSDEPFLSGDPANRSSVDGTIPRTRLPSVELSPGPRGRAGSGSAHSSYYSFPSEHGGGRWKAGVGLGVAAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDNEPMIIGGESIHTELGWPPPSLAYTKKRIEGSAAGEADLDIDVDRASQGMFWMHFKALLAKRATYGLRDKKSQFFQLIVPTLLFLLGLILLRLSRNVFDQPSLLLSPGTHFNPG-KSSTIRNPVPLDAPRDEPESLASAVADRFDG---VSVDGKSVTIP-----VGGAEDNFKGCAQGASALVNMSDFLLDAAGPGEQGASRYGAIVLDGSSRLPNSSRLLLPNSRDEDGEEENGEGXXXEERGNVGYWAGSLAYGVLVNASAVHGAPIFMNLVNSAALQAIFASESSGEELESRSGXXXXXXXXXXXXXXXXXXRSLPSITVRSSPLPRTKGEEQTRQTIDGFTTAIMVVISMCFLPASYAIFVVKERAVKAKHQQIISGVGVVSYWASTFVFDVASYLIPFVVFLSLLYAFDIQSYTTSEAAGATALLFLFYGPAVAPFTYCISFLFESASSAQTMVLFVNFVTGLALMVVSFVLNLVESTRDVNAKLKWIYRLFPGFCLGDGLAQLVLCEDGKTCVDISSMGRGPPQKLTPLSWAITGADIASLVVTCIAYLVICLLIEY--------------------------GSTSPKLLGWSSPDPTTDTNSDXXXXXXDVAAEARRVERMGMGGTLGDMEGGGQVILNNLRKVYRTKQ--GPKVAVQGLSFSVSRGDCFGFLGINGAGKSTTLGILSGDICPTRGQASIAGHDILTEQTKLRRYIGYCPQDDALLDLLTVEEHLLLYARIKGVKKTRLKDVADQKMQEMDLTPFRSVKACELSGGNKRKLSVAIAMIGNPRVVFLDEPSTGMDPIARRFMWDIISRMTTTDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADIKMRPPSNAEAVEVMQRI-------------VKEDVDNLVG--DELNSSRLRPPLENCCRRLER--GDSDSGSTRAGTL--EAALNDGS-GAFLFDVLGSEGGTLPTRLFIDWYLCEERINDLNAFLEKTFPGAELVERPTLFSCRYKIPHQDGMNLADVFGHFEAAKAKLGLASYAVGQTTLEQIFNGFAA 6789
K+ A+IF++ + PQ +DY++RLN+T+ S F + T + P T + PT Y +SGFLTLQ+ VD FI+ A + RM+ N+ + FP +A+ D+FQ II +G+ Y+L FLYP+SR + V EKE ++KE L MMGL D ++ SWFIT+ Q+ +++ +I V ++F YSD LVFV+ L+ + F+I+TFFSR+KTA +G++ F A F PYY V AV + K ASL PT ALGT FA +E VGV+ SN+ ++ + ++ + M+L+D LY + YLDKV+P E G PW+F + W K ++ S N L S S+ E++ Y+ G VE + + QQ ++GR + R L KVY N K AV L L L+E I LLGHNGAGKST ISM+ G LPP+ G+A + G+ + SD+ +R+ LGVC Q + LF ELTV +HL+LFA++KGV V+ + M+ EVGL +K +T ALSGG KRKLS+ +A IG S+V++LDEPTSGMDP+S RSTW ++++ +KGR++LLTTH MDEAD LGDRIAIM G LRC GSS+FLK YGVGYTLT++K+ G AS ++ +V VP A ++ VG E ++RLP AS+S F MF EI+ RR +S +G+ YG+SVTTLEEVFLRV D S + + E S + +A S +Y V A I T +G SL + S G I + FW+HF+ALL KRA RD+++ FQL VP + LGL+L+RL + DQ S+ + + FNP + P+ + R +A VA G V+ +S P + A + G G S L++MS++L+ + E SRYGAI++D +++DG SL Y VL N S H AP ++NL+NSA L+ +E+ +I R+ PLP T + R+ +D F+ AI+V I+ F+PAS+A+ +VKER VKAKHQQ++SGV V+SYW ST+ +D+AS+L P + L Y F ++ + S T L+FL +G A+A TYC++F F SSAQ +VL V+F TGL LM+VSFV+ ++EST+ N+ LK +RL PGFC DGLA L L G +G G L W +TGA I L V I + ++ + +E S+ LL SS P D D DV AE RV + G++ + L NLRKVY + GPKVAV L+FSV G+CFGFLG NGAGK+TTL +LSG+ CPT G A I G DI RR+IGYCPQ DALL+ LTV+EHL LYARIKGV + R+KDV ++KM+E DL + +C LSGGNKRKLSVAIAMIG+P +V LDEPSTGMDP+A+RFMW++ISR++T + +VILTTHSM EA++LC IGIMV G+LRC+GS QHLK RFG E ++K S+ E ++ +RI + D++ +G D + S + + + G + R TL A + DG G L + L +GG +P +F +W+L +E+ + +++F++ +FPGA L S +Y++P+ + +LAD+FGH E + +LG+A Y++ Q+TLE IFN FAA
Sbjct: 148 KIRGAIIFHE-----QGPQLYDYSIRLNHTWAFSGFPDIKTIM------DVNGPYTNDLELGVNIVPTLQ----YGFSGFLTLQQVVDSFIIFAAQQNETDIDDGNSNLTRMHFSPSNIRIAPFPTRAYTDDEFQLIIKKVMGVLYILGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDEIFYLSWFITYSIQFALSSGIITAVTMGNLFSYSDKSLVFVYFFLFGLSAIMLSFIITTFFSRAKTAVAVGTLSFLAGFLPYYTVNDPAV-PMMLKVIASLLSPTAFALGTVNFADYERAHVGVRWSNMWRA-SSGVNFLVCLMMMLVDTLLYCGIGLYLDKVLPRENGVSYPWNFVF-------------------------------------KFCFWEKKSTSEHDSGN---------LEVKHSDVFSANEFM----------YNVNGSLSEPAVEAISLDMKQQELDGRCIQIRNLSKVYINKKQKCCAVNSLWLTLYENQILALLGHNGAGKSTTISMLVGLLPPSSGDALVFGKNIRSDMDEIRKGLGVCPQHDILFPELTVKEHLELFAILKGVEEDCVEKSVSEMLDEVGLTDKVNTVVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRSTWQLIKKIKKGRIVLLTTHSMDEADVLGDRIAIMGNGSLRCCGSSLFLKHQYGVGYTLTLVKSAPG----------------ASVATD-----------------IVYRHVPLATRLTDVGTEISFRLPLASSSSFESMFCEIESCTRRTITDTETGGSHGESGVGIQSYGISVTTLEEVFLRVAG------CEFDETEYVSHNKALVLAESMVSEASHHTQNKASSPKLLWWHYK----------------NVLA----------------------------------------------------MIFTIMGRAC-SLIFNTVFSFLSFLGSYSFCI----TPRSTFWVHFRALLIKRAVSARRDRRTIVFQLFVPAVFLFLGLLLVRLKPHP-DQQSVTFTT-SEFNPLLQGDGGGGPITFNLSR----PVAELVAQHVQGGWIQKVEPRSYRFPHPRRALADAIE-VAGPELGPS-LISMSEYLMTSFN--ESYESRYGAIIMD---------------DQNDDG---------------------SLGYTVLHNCSCQHAAPTYINLMNSAILRLATRNENM-------------------------------TIQTRNHPLPMTSSQHSQRRDLDAFSAAIIVTIAFSFIPASFAVSIVKEREVKAKHQQLLSGVSVLSYWTSTYTWDLASFLCPSFFAIILFYIFGLEQFVGSGCLLPTLLIFLEFGLAIASSTYCLTFFFSEHSSAQNVVLLVHFFTGLILMMVSFVMGIIESTKTANSILKNFFRLSPGFCFADGLASLALRRQGM------KLGSGDGI----LDWNVTGASICYLGVESIVFFLLTIGLEVIPSQKLASITMRDWWRRFRQFRFNPSNSSYEPLLNSSSDTPAHDNERDI-----DVQAERDRV----LSGSVDKAI----IYLRNLRKVYPGGRNVGPKVAVHSLTFSVQEGECFGFLGTNGAGKTTTLSMLSGEECPTGGTAYIFGSDISLHPQAARRHIGYCPQFDALLEFLTVKEHLELYARIKGVAECRIKDVVEEKMEEFDLWKHGNKPSCSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPLAKRFMWEVISRLSTRLGKTAVILTTHSMNEAQALCTRIGIMVGGKLRCIGSPQHLKSRFGNHLELEVKPTEVSSEEMDKLCRRIQGRLFDLPLHPRGIFSDLEVCIGGSDSITSENVSLAEISLTEEMMIIVGHWLGNAERIRTLVYAALVTDGVFGEQLAEQLMRDGG-IPLPIFSEWWLLKEKFSVIDSFIQCSFPGATFHGCNGL-SVKYQLPYGEESSLADIFGHLERNRNQLGVAEYSISQSTLETIFNHFAA 1879
BLAST of mRNA_C-linearis_contig111.1505.1 vs. uniprot
Match: A0A484L6B9_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484L6B9_9ASTE) HSP 1 Score: 1003 bits (2593), Expect = 0.000e+0 Identity = 724/2031 (35.65%), Postives = 1026/2031 (50.52%), Query Frame = 1
Query: 1015 KVGMAVIFNKAPLEGEVPQ-WDYTLRLNYTYGVSQFEEQATCLYPGCSLKYKLPSTLVTTSALERPPTSSHLWGYSYSGFLTLQKSVDEFILSRA------------AGDRMYLNVSVGF------------FPEQAFRTDQFQQIITSTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALRMMGLPDLAYHSSWFITFQAQWLVTNLLILLVVWDSVFRYSDHWLVFVWLEAVALAVMAFCFLISTFFSRSKTAATLGSIIFFAAFFPYYFVGGNAVTDVATKTWASLFVPTCMALGTDTFAAFEGGLVGVQRSNV-RQSYEDRLPYVNMVTMLLIDAALYFVLAWYLDKVVPSEFGTPLPWHFPVSAPIEARRRAKRSMQQRQEVHSAVNAQAARALARRARQLKEWITKGSARDGSVNGGAEDLAMPLLPASSQRMSSREWVASTGLEGVHTYDEEGGARVEPVGPQLSQQVVEGRTVSTRGLVKVYANGK---AAVKGLNLDLFEGHISVLLGHNGAGKSTAISMVTGTLPPTKGEAYLRGRKLSSDLAGVRRSLGVCFQQNTLFEELTVLQHLKLFAVVKGVRARDVDDEAARMVSEVGLVEKRDTPASALSGGQKRKLSVALAFIGGSEVVVLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIMVEGELRCMGSSMFLKGLYGVGYTLTVMKTDQGDGTGYTSGSIDPWERRASTSSGSFMMRAEMQGGQDSLEALVLEFVPEALTVSKVGKERNYRLPFASASKFVDMFREID---RRKS-----------ELGVAGYGVSVTTLEEVFLRVG---------HGSDEPFLSGDPANRSSVDGTIPRTRLPSVELSPGPRGRAGSGSAHSSYYSFPSEHGGGRWKAGVGLGVAAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDNEPMIIGGESIHTELGWPPPSLAYTKKRIEGSAAGEADLDIDVDRA-SQGMFWMHFKALLAKRATYGLRDKKSQFFQLIVPTLLFLLGLILLRLSRNVFDQPSLLLSPGTHFNPGKSSTIRN-PVPLDAPRDEPESLASAVAD-----------RFDGVSVDGKSVTIPVGGAEDNFKGCAQGASALVNMSDFLLDAAGPGEQGASRYGAIVLDGSSRLPNSSRLLLPNSRDEDGEEENGEGXXXEERGNVGYWAGSLAYGVLVNASAVHGAPIFMNLVNSAALQAIFASESSGEELESRSGXXXXXXXXXXXXXXXXXXRSLPSITVRSSPLPRTKGEEQTRQTIDGFTTAIMVVISMCFLPASYAIFVVKERAVKAKHQQIISGVGVVSYWASTFVFDVASYLIPFVVFLSLLYAFDIQSYTTSEAAGATALLFLFYGPAVAPFTYCISFLFESASSAQTMVLFVNFVTGLALMVVSFVLNLVESTRDVNAKLKWIYRLFPGFCLGDGLAQLVLCEDG-KTCVDISSMGRGPPQKLTPLSWAITGADIASLVVTCIAYLVICLLIEYGS----TSPKLLGW-------------SSPDPTTDTNSDXXXXXX-DVAAEARRVERMGMGGTLGDMEGGGQVILNNLRKVYR--TKQGPKVAVQGLSFSVSRGDCFGFLGINGAGKSTTLGILSGDICPTRGQASIAGHDILTEQTKLRRYIGYCPQDDALLDLLTVEEHLLLYARIKGVKKTRLKDVADQKMQEMDLTPFRSVKACELSGGNKRKLSVAIAMIGNPRVVFLDEPSTGMDPIARRFMWDIISRMTTTDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADIKMRPPSNAEAVEVMQRIVKEDVDNLVGDELNSSRLRPPLENCCRRLERGDSDS-----------------GSTRAGTLEAALNDGSGAF--LFDVLGSEGGTLPTRLFIDWYLCEERINDLNAFLEKTFPGAELVERPTLFSCRYKIPHQDGMNLADVFGHFEAAKAKLGLASYAVGQTTLEQIFNGFAAS 6792
K+ A+IF++ + PQ +DY++RLN+T+ S F T + L + L+ YS SGF TLQ+ +D FI+ A + S+ + FP + + D+FQ I+ +GI Y+L FLYP+SR + V EKE ++KE L MMGL D +H SWF+T+ Q+ V+++ I L ++F+YSD LVF + A L+ + FLISTFF+R+KTA +G++ F AFFPYY + ++ V K AS PT ALG+ FA +E VG++ SN+ R+S + ++ + M+L+D LY + YLDKV+ E G WHF ++ + G++R+ D + P + + S +E S+ L Y +EP+ ++ Q+ ++GR V R L KVY+ + +AVK L L L+E I LLGHNGAGKST +SM+ G LPPT G+A + G+ + +D+ +R+SLGVC Q + LF ELTV +HL++FA VKGV +D+ MV EVGL +K +T ALSGG KRKLS+ +A +G S++VVLDEPTSGMDP+S R TW +++R++KGR+ILLTTH MDEAD LGDRIAIM G L+C GSS+FLK YG GYTLT++KT G ++ +V + +P A +S+VG E +++LP S+ F MFRE++ +R + ++G+ +G+SVTTLEEVFLRV H E ++ D A + P+ S SY+S SI T +G ++Y SA + S+ MFW H KAL KRA RD K+ FQL++P + L GL+ L+L + DQ S+ + ++FNP S P+P D + +A+ V RF GK+++ + A AL++MS++L+ + Q SRYGAIV+D N D+ GSL Y VL N+S H AP F+N++NSA L+ +E+ +I R+ PLP T+ + Q +D F+ A++V I+ F+P+S+A+ +VKER VKAKHQQ+ISGV ++SYWAS +++D S+L P L + F + + ++ TAL+FL YG A+A TYC++F F S AQ +VL V+F TGL LM+VSF++ L+EST +N+ LK +RL PGFC DGLA L L G KT D L W +TGA + L V AY ++ L IEY S T L W SS +P ++ D DV + RV L + + L NLRKVY GPK+AV L+FSV G+CFGFLG NGAGK+TTL +L G+ P+ G A I G DI + RR IGYCPQ DALL+ LTV+EHL LYARIKGV + L DV K+ E DL + + LSGGNKRKLSVAIAMIGNP +V LDEPSTGMDPIA+RFMW++ISR++T + +VILTTHSM EA++LC IGIMV G+LRC+GS QHLK RFG E ++K S+ + +E + ++VKE + +L L SR+ +E C +E S + R + A D SG L + L +GG +P +F +W+L +E+ + ++AF++ +FPGA L S +Y++P+ + ++LADVFGH E + +LG++ Y+VGQ+TLE IFN FAA+
Sbjct: 169 KIKGAIIFHE-----QGPQVFDYSIRLNHTWAFSGFPNVGTIMDTNGPFLNDLELGVNPVPILQ----------YSLSGFFTLQQVMDSFIIYVAQHISTNSSLLQWGSSGTHFPASIPWTQFSPSNIRTVPFPTREYTDDEFQSIVKKVMGIMYLLGFLYPISRLISYSVIEKELKIKEGLFMMGLKDEIFHLSWFLTYALQFAVSSMTITLCTMSTLFQYSDKSLVFAYFFAFGLSAITLSFLISTFFTRAKTAVAVGTLAFLGAFFPYYTINDETISMVL-KLMASFLSPTAFALGSINFADYERAHVGLRWSNIWRES--SGVCFLLCLLMMLVDTVLYAAIGIYLDKVLSRESG----WHFSWNSTF----------------------------------WNSFQRTGNSRE-------HDASTPEVSLTYN--SDKE---SSNLHREEIYK----PAMEPISLEMKQREMDGRCVKIRNLQKVYSTDRGKCSAVKSLQLTLYENQILALLGHNGAGKSTTLSMLVGLLPPTSGDALVFGKNILTDMDEIRKSLGVCPQYDILFPELTVKEHLEIFANVKGVSEDTIDNLVTEMVDEVGLADKLNTVVRALSGGMKRKLSLGIALLGNSKIVVLDEPTSGMDPYSMRLTWQLIKRKKKGRIILLTTHSMDEADVLGDRIAIMANGSLKCCGSSLFLKHHYGAGYTLTLVKTAP---------------------------------GATAVADIVYQHIPSAKCISEVGTEISFKLPLTSSYSFGSMFRELECFMKRSTSKSNIDSCGEEDVGIESFGISVTTLEEVFLRVAGGDFDEDESHEEREILVARDTAVLGACQSYAPKRFYHSKSCG--------------SYFSIMC---------------------------------------------------------------------SIATIIG----RISYLILTTVLSAFRFLSMQCXXXXIFSRSMFWKHSKALFIKRAKSAQRDMKTIVFQLLIPVVFLLSGLLFLKLKPHP-DQQSVTFTT-SYFNPLLSGGGGGGPIPFDLTWPIEKEVANYVRGGWIQMFQQTTYRFPN---SGKALSDAIEAAGSTL------GPALLSMSEYLMSSFNESYQ--SRYGAIVMD--------------NQHDD----------------------GSLGYTVLHNSSCQHSAPTFINVMNSAILRLATQNENM-------------------------------TIVTRNHPLPMTESQHQQHHDLDAFSAAVVVTIAFSFIPSSFAVAIVKEREVKAKHQQLISGVSILSYWASAYIWDFISFLFPSSFSLIIFCIFGLDQFVGKDSLFPTALMFLEYGLAIASSTYCLTFFFSEHSMAQNVVLLVHFFTGLILMIVSFIMGLIESTTHLNSLLKNFFRLSPGFCFADGLASLALLRQGMKTDSDDHV-----------LDWDVTGASLCYLAVEAFAYFLLTLGIEYFSHRRMTLSILYEWWKGSKEAVYATFGSSSEPLLQSSVDVTPELDEDVDVQTERVR------VLSGLTDNAIICLCNLRKVYDGCKNHGPKIAVHSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEEQPSDGTAFIFGRDICSNPKIARRDIGYCPQFDALLEFLTVQEHLELYARIKGVPEYELDDVVMGKLVEFDLLKHANKPSFALSGGNKRKLSVAIAMIGNPPIVILDEPSTGMDPIAKRFMWEVISRLSTRCGKTAVILTTHSMNEAQALCTRIGIMVGGKLRCIGSPQHLKTRFGNHLELEVKPIEVSSND-LENLCQLVKEKLFDL--PPLQRSRV-DGIEECMGNIESHTSVAEISLTAEMIMTLGSWLGNEERVKEIACAPVDSSGRVEQLVEQLVRDGG-IPLPIFCEWWLAKEKFSAIDAFVQSSFPGAAFQGCNGL-SVKYQLPYGEDISLADVFGHIEMNRDQLGISEYSVGQSTLETIFNHFAAN 1904
BLAST of mRNA_C-linearis_contig111.1505.1 vs. uniprot
Match: F6HKV8_VITVI (Uncharacterized protein n=5 Tax=Vitis TaxID=3603 RepID=F6HKV8_VITVI) HSP 1 Score: 1002 bits (2590), Expect = 0.000e+0 Identity = 731/2024 (36.12%), Postives = 1036/2024 (51.19%), Query Frame = 1
Query: 1015 KVGMAVIFN-KAPLEGEVPQWDYTLRLNYTYGVSQFEEQATCLYPGCSLKYKLPSTLVTTSALERPPTSSHLWGYSYSGFLTLQKSVDEFILSRAAGDRMYL------------------------NVSVGFFPEQAFRTDQFQQIITSTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALRMMGLPDLAYHSSWFITFQAQWLVTNLLILLVVWDSVFRYSDHWLVFVWLEAVALAVMAFCFLISTFFSRSKTAATLGSIIFFAAFFPYYFVGGNAVTDVATKTWASLFVPTCMALGTDTFAAFEGGLVGVQRSNVRQSYEDRLPYVNMVTMLLIDAALYFVLAWYLDKVVPSEFGTPLPWHFPVSAPIEARRRAKRSMQQRQEVHSAVNAQAARALARRARQLKEWITKGSARDGSVNGGAEDLAMPLLPASSQRMSSREWVASTGLEGVHTYDEEGGARVEPVGPQLSQQVVEGRTVSTRGLVKVYANGKA---AVKGLNLDLFEGHISVLLGHNGAGKSTAISMVTGTLPPTKGEAYLRGRKLSSDLAGVRRSLGVCFQQNTLFEELTVLQHLKLFAVVKGVRARDVDDEAARMVSEVGLVEKRDTPASALSGGQKRKLSVALAFIGGSEVVVLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIMVEGELRCMGSSMFLKGLYGVGYTLTVMKTDQGDGTGYTSGSIDPWERRASTSSGSFMMRAEMQGGQDSLEALVLEFVPEALTVSKVGKERNYRLPFASASKFVDMFREI----------DRRKSE----LGVAGYGVSVTTLEEVFLRV-GHGSDEPFLSGDPANRSSVDGTIPRTRLPSVELSPGPRGRAGSGSAHSSYYSFPSEHGGGRWKAGVGLGVAAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDNEPMIIGGE-SIHTELGWPPPSLAYTKKRIEGSAAGEADLDIDVDRASQGMFWMHFKALLAKRATYGLRDKKSQFFQLIVPTLLFLLGLILLRLSRNVFDQPSLLLSPGTHFNPG-KSSTIRNPVPLDAPRDEPESLASAVADRFDGVSVDG-KSVTIPVGGAEDNFKGCAQGAS-----ALVNMSDFLLDAAGPGEQGASRYGAIVLDGSSRLPNSSRLLLPNSRDEDGEEENGEGXXXEERGNVGYWAGSLAYGVLVNASAVHGAPIFMNLVNSAALQAIFASESSGEELESRSGXXXXXXXXXXXXXXXXXXRSLPSITVRSSPLPRTKGEEQTRQTIDGFTTAIMVVISMCFLPASYAIFVVKERAVKAKHQQIISGVGVVSYWASTFVFDVASYLIPFVVFLSLLYAFDIQSYTTSEAAGATALLFLFYGPAVAPFTYCISFLFESASSAQTMVLFVNFVTGLALMVVSFVLNLVESTRDVNAKLKWIYRLFPGFCLGDGLAQLVLCEDGKTCVDISSMGRGPPQKLTPLSWAITGADIASLVVTCIAYLVICLLIE---------------YGSTSPKLLGWSSP-----DPTTDTNSDXXXXXXDVAAEARRVERMGMGGTLGDMEGGGQVILNNLRKVYRTKQ--GPKVAVQGLSFSVSRGDCFGFLGINGAGKSTTLGILSGDICPTRGQASIAGHDILTEQTKLRRYIGYCPQDDALLDLLTVEEHLLLYARIKGVKKTRLKDVADQKMQEMDLTPFRSVKACELSGGNKRKLSVAIAMIGNPRVVFLDEPSTGMDPIARRFMWDIISRMTTTDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADIKMRPPSNAEAVEVMQRIVKEDVDNLVGDELNSSRLRPPLENCCRRLERGDSDSGST---------------------RAGTLEAALNDGSGAF---LFDVLGSEGG-TLPTRLFIDWYLCEERINDLNAFLEKTFPGAELVERPTLFSCRYKIPHQDGMNLADVFGHFEAAKAKLGLASYAVGQTTLEQIFNGFAAS 6792
K+ AV+F+ + PL +DY++RLN+++ S F + T + L + L+ YS+SGFLTLQ+ +D FI+ A + + N+ + FP + + D+FQ II S +G+ Y+L FLYP+SR + V EKE ++KE+L MMGL D +H SWFIT+ Q+ VT+ +I D++F+YSD LVF++ L+ + FLISTFF+R+KTA +G++ F AFFPYY V AV + K ASL PT ALG+ FA +E VG++ SNV ++ + ++ + M+L+DA LY + YLDKV+P E G PW+FP K S ++R + + + K R VN + D++ P VE + + QQ ++GR + R L KVYA K AV L L L+E I LLGHNGAGKST ISM+ G LPPT G+A + G+ + +++ +R+ LGVC Q + LF ELTV +HL++FA++KGV ++ MV EVGL +K +T ALSGG KRKLS+ +A IG S+V+VLDEPTSGMDP+S R TW +++R +KGR+ILLTTH MDEAD LGDRIAIM G L+C GSS+FLK YGVGYTLT++K S+ S + A+ +V VP A VS+VG E +++LP +S+S F MFREI DR +E LG+ YG+SVTTLEEVFLRV G DE S D + + SP + + ++S P G++K +GV + VE +I S S + K I FW H KALL KRA RD+K+ FQL++P + L GL+LL+L + DQ S+ + +HFNP + P+P D +A VA +G + K T + + A L++MS+FL+ + Q SRYGA+V+D ++ GSL Y VL N S H AP F+NL+N+A L+ FA+ + +++R+ PLP TK + R +D F+ A++V I++ F+PAS+A+ +VKER VKAKHQQ+ISGV V+SYWAST+++D S+L+P ++L Y F + + T L+FL YG A+A TYC++F F + AQ +VL ++F TGL LMV+SF++ L+++T N+ LK +RL PGFC DGLA L L G M G + L W +TGA I L V I + ++ L +E + + G SS + T++T S DV E RV L + L NLRKVY + PK+AV L+FSV G+CFGFLG NGAGK+TTL +L+G+ CPT G A I G D+ + RR+IGYCPQ DALL+ LTV+EHL LYARIKGV R++DV +K+ E DL + + LSGGNKRKLSVAIAM+G+P +V LDEPSTGMDPIA+RFMW++ISR++T + +VILTTHSM EA++LC IGIMV GRLRC+GS+QHLK RFG E ++K S+ + +E + R ++E + ++ + + LE C ++ S++ S R TL ++ G F L + L +GG +LP +F +W+L +E+ + +++F+ +FPGA L S +Y++P+ ++LADVFGH E + +LG+A Y++ Q+TLE IFN FAA+
Sbjct: 147 KIKGAVVFHDQGPLV-----FDYSIRLNHSWAFSGFPDVKTIMDTNGPYLNDLELGVDAVPTLQ----------YSFSGFLTLQQVLDSFIIFAAQQNEANMVNENIELPSNTSLIKQSWMQFIPSNIKIVPFPTREYTDDEFQSIIKSVMGLLYLLGFLYPISRLISYSVFEKEQKIKESLYMMGLKDEIFHLSWFITYALQFAVTSGIITACTMDTLFQYSDKSLVFIYFFLFGLSAIMLSFLISTFFTRAKTAVAVGTLSFLGAFFPYYTVNDQAVPMIL-KFIASLLSPTAFALGSINFADYERAYVGLRWSNVWRA-SSGVNFLACLLMMLLDALLYCAIGLYLDKVLPRENGVRSPWNFPF---------LKCSWRKRSSIKH---------------EDCSFDFKNDRR--KVNFCSNDISGPA--------------------------------VEAISLDMKQQELDGRCIQIRNLHKVYATKKGNCCAVNSLRLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNIITEMDEIRKQLGVCPQNDILFPELTVKEHLEIFAILKGVTENFLESAVTEMVDEVGLADKVNTVVGALSGGMKRKLSLGIALIGNSKVIVLDEPTSGMDPYSMRLTWQLIKRIKKGRIILLTTHSMDEADVLGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVK-----------------------SAPSASIAAD----------IVYRHVPSATCVSEVGTEISFKLPLSSSSSFESMFREIESCMNSVHNSDRSGNEDKYNLGIESYGISVTTLEEVFLRVAGCDFDETECSKQEKLHVLPDSVV-------SQASP-------NHAPKQIFHSKPL----GKYKI---IGVVS--------------------------------------TIVERACSLIFAAVLSFINFFSVQCCSCCFISKSI---------------------FWEHSKALLIKRAIIARRDRKTIVFQLLIPAVFLLFGLLLLKLKPHP-DQQSVTFTT-SHFNPLLRGGGGGGPIPFDLSW----PIAKEVAWYVEGGWIQRFKPTTYRFPDPDKALADAIEAAGPTLGPTLLSMSEFLMSSFNESYQ--SRYGAVVMDDQNK------------------------------------DGSLGYTVLHNGSCQHAAPTFINLMNAAILR--FATLNKNMTIQTRN-----------------------------HPLPMTKSQHLQRHDLDAFSAAVIVNIALSFVPASFAVSIVKEREVKAKHQQLISGVSVLSYWASTYLWDFVSFLLPSSFAITLFYIFGMDQFIGKGRFFPTVLMFLEYGLAIASSTYCLTFSFSDHTMAQNVVLLLHFFTGLVLMVISFIMGLIQTTESTNSVLKNFFRLSPGFCFADGLASLALLRQG--------MKGGSSDGV--LDWNVTGASICYLGVESIGFFLLTLGLELLPPRKFSLFTILEPWRAIKNSWHGTSSYLEPLLESTSETASIDLDEDIDVQTERNRV--------LSGSADNAIIYLRNLRKVYPGGKHLSPKIAVHSLTFSVHEGECFGFLGTNGAGKTTTLSMLTGEECPTDGTAFIFGKDVCSNPKAARRHIGYCPQFDALLEYLTVQEHLELYARIKGVPGYRMQDVVMEKLVEFDLLRHANKPSFSLSGGNKRKLSVAIAMVGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMAEAQALCTRIGIMVGGRLRCIGSSQHLKTRFGNHLELEVKPTEVSHVD-LENLCRFIQERLFHIP----HPRSILSDLEVCIGAVDSITSENASVAEISLSPEMIVMIGRWLGNEERISTLVSSTPVSDGVFGEQLSEQLFRDGGISLP--IFSEWWLAKEKFSAIDSFILSSFPGATFHGCNGL-SVKYQLPY-GYISLADVFGHLERNRYQLGIAEYSLSQSTLESIFNHFAAN 1880
BLAST of mRNA_C-linearis_contig111.1505.1 vs. uniprot
Match: A0A061EWL2_THECC (ABC transporter family, cholesterol/phospholipid flippase isoform 1 n=4 Tax=Byttnerioideae TaxID=214909 RepID=A0A061EWL2_THECC) HSP 1 Score: 999 bits (2583), Expect = 0.000e+0 Identity = 729/2022 (36.05%), Postives = 1037/2022 (51.29%), Query Frame = 1
Query: 1015 KVGMAVIFNKAPLEGEVPQ-WDYTLRLNYTYGVSQFEEQATCLYPGCSLKYKLPSTLVTTSALERPPTSSHLWGYSYSGFLTLQKSVDEFIL---------------------SRAAGDRMYL--------NVSVGFFPEQAFRTDQFQQIITSTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALRMMGLPDLAYHSSWFITFQAQWLVTNLLILLVVWDSVFRYSDHWLVFVWLEAVALAVMAFCFLISTFFSRSKTAATLGSIIFFAAFFPYYFVGGNAVTDVATKTWASLFVPTCMALGTDTFAAFEGGLVGVQRSNVRQSYEDRLPYVNMVTMLLIDAALYFVLAWYLDKVVPSEFGTPLPWHFPVSAPIEARRRAKRSMQQRQEVHSAVNAQAARALARRARQLKEWITKGSARDGSVNGGAEDLAMPLLPASSQRMSSREWVASTGLEGVHTYDEEGGARVEPVGPQLSQQVVEGRTVSTRGLVKVYANGKA---AVKGLNLDLFEGHISVLLGHNGAGKSTAISMVTGTLPPTKGEAYLRGRKLSSDLAGVRRSLGVCFQQNTLFEELTVLQHLKLFAVVKGVRARDVDDEAARMVSEVGLVEKRDTPASALSGGQKRKLSVALAFIGGSEVVVLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIMVEGELRCMGSSMFLKGLYGVGYTLTVMKTDQGDGTGYTSGSIDPWERRASTSSGSFMMRAEMQGGQDSLEALVLEFVPEALTVSKVGKERNYRLPFASASKFVDMFREID--------------RRKSELGVAGYGVSVTTLEEVFLRV-GHGSDEPFLSGDPANRSSVDGTIPRTRLPSVELSPGPRGRAGSGSAHSSYYSFPSEHGGGRWKAGVGLGVAAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDNEPMIIGGESIHTELGWPPPSLAYTKKRIEGSAAGEADLDIDVDRASQGMFWMHFKALLAKRATYGLRDKKSQFFQLIVPTLLFLLGLILLRLSRNVFDQPSLLLSPGTHFNPGKS-STIRNPVPLDAP----RDEPESLASAVADRFDGVSVDGKSVTIPVGGAEDNFKGCAQGASALVNMSDFLLDAAGPGEQGASRYGAIVLDGSSRLPNSSRLLLPNSRDEDGEEENGEGXXXEERGNVGYWAGSLAYGVLVNASAVHGAPIFMNLVNSAALQAIFASESSGEELESRSGXXXXXXXXXXXXXXXXXXRSLPSITVRSSPLPRTKGEEQTRQTIDGFTTAIMVVISMCFLPASYAIFVVKERAVKAKHQQIISGVGVVSYWASTFVFDVASYLIPFVVFLSLLYAFDIQSYTTSEAAGATALLFLFYGPAVAPFTYCISFLFESASSAQTMVLFVNFVTGLALMVVSFVLNLVESTRDVNAKLKWIYRLFPGFCLGDGLAQLVLCEDGKTCVDISSMGRGPPQKLTPLSWAITGADIASLVVTCIAYLVICLLIEY----GSTSPKLLGW----------SSPDPTTDTNSDXXXXXX---DVAAEARRVERMGMGGTLGDMEGGGQVILNNLRKVYRTKQG--PKVAVQGLSFSVSRGDCFGFLGINGAGKSTTLGILSGDICPTRGQASIAGHDILTEQTKLRRYIGYCPQDDALLDLLTVEEHLLLYARIKGVKKTRLKDVADQKMQEMDLTPFRSVKACELSGGNKRKLSVAIAMIGNPRVVFLDEPSTGMDPIARRFMWDIISRMTTTDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADIKMRPPSNAEAVEVMQRIVKEDVDNLVGDELNSSRLRPPLENCCRRLERGDSDSGST---------------------RAGTLEAALNDGSGAF---LFDVLGSEGGTLPTRLFIDWYLCEERINDLNAFLEKTFPGAELVERPTLFSCRYKIPHQDGMNLADVFGHFEAAKAKLGLASYAVGQTTLEQIFNGFAAS 6792
K+ AVIF+ + PQ +DY++RLN+T+ S F + +K + + + LE YS+SGFLTLQ+ +D FI+ S A + L + + FP + + D+FQ II S +G+ Y+L FLYP+SR + V EKE +++E L MMGL D +H SWFIT+ Q+ ++ +I + DS+F+YSD +VFV+ L+ + FLISTFF+R+KTA +G++ F AFFPYY V AV + K AS PT ALG+ FA +E VG++ SN+ ++ + ++ + M+L DA LY + YLDKV+PSE G PW+F + R+ +K + S + VN + + + + R+ V+ LE + ++ QQ ++GR + + L KVYA K AV L L+L+E I LLGHNGAGKST ISM+ G LPPT G+A + G+ + + + +R+ LGVC Q + LF ELTV +HL++FAV+KGV+ ++ MV EVGL +K +T ALSGG KRKLS+ +A IG S+V++LDEPTSGMDP+S R TW ++++ +KGR+ILLTTH MDEAD LGDRIAIM +G L+C GSS+FLK YGVGYTLT++K+ A T+S + +V +VP A VS+VG E +++LP A++S F MFREI+ K LG+ YG+SVTTLEEVFLRV G DE N S D +PS E P SY G +K +G V + I G + L + + + + G S+ M W H +ALL KRA RD+K+ FQL++P + L GL+ L+L + DQPS+ L+ +HFNP S S P+P D ++ + + RF + + A + G A G L++MS++L+ + Q SRYGA+V+D +V Y GSL Y VL N S H AP ++N++NSA L+ + ++ +I R+ PLP TK + +D F+ AI+V I+ F+PAS+A+ +VKER VKAKHQQ+ISGV V+SYW ST+++D S+L P + L Y F + + + T ++FL YG AVA TYC++F F + AQ +VL ++F TGL LMV+SF++ L+++T N+ LK +RL PGFC DGLA L L G D SS G W +TGA I L V I Y ++ L +E T +L+ W S +P ++ + DV E RV + G++ + + L NLRKVY + KVAV L+FSV G+CFGFLG NGAGK+TTL +L+G+ PT G A I G DI + RR+IGYCPQ DALL+ LTV+EHL LYARIKGV R+ DV +K+ E DL + + LSGGNKRKLSVAIAMIG+P +V LDEPSTGMDPIA+RFMW++ISR++T + +VILTTHSM EA++LC IGIMV GRLRC+GS QHLK RFG E ++K S+A+ +E + RI++E + ++ + L LE C ++ S++ S R TL ++ G F L + L +GG +P +F +W+L E+ + +++F+ +FPGA L S +Y++P+++G++LADVFGH E + +LG+A Y++ Q+TLE IFN FAA+
Sbjct: 145 KIKGAVIFHH-----QGPQLFDYSIRLNHTWAFSGFPD----------VKSIMDTNGPYLNDLELGVDIIPTMQYSFSGFLTLQQVLDSFIIFASQQTKTGMDSENREFSPLHSTGATSSLELPWTQFSPTKIRIAPFPTREYTDDEFQSIIKSVMGLLYLLGFLYPISRLISYTVFEKEQKIREGLYMMGLKDGIFHLSWFITYAFQFAFSSGIITICTMDSLFKYSDKTVVFVYFFVFGLSAIMLSFLISTFFTRAKTAVAVGTLSFLGAFFPYYTVNDEAVAMIL-KVIASFLSPTAFALGSINFADYERAHVGLRWSNIWRA-SSGVNFLVCLLMMLFDALLYCAVGLYLDKVLPSESGVRYPWNFIFH----------------------------KCFCRKKSTIKHHV---SCYEVKVND---------MISKRKSIIPRKDVSGPALEAISL--------------EMKQQEIDGRCIQIKDLHKVYATKKGKCCAVNSLKLNLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKSILTHMDEIRKELGVCPQNDILFPELTVREHLEMFAVLKGVKEDTLESAVTEMVDEVGLADKLNTFVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMADGSLKCCGSSLFLKHQYGVGYTLTLVKS-------------------APTAS--------------AAADIVYRYVPSATCVSEVGTEISFKLPLATSSAFESMFREIESCIGRSASTETSVSEDKRYLGIESYGISVTTLEEVFLRVAGCDFDEAESVKQGNNFVSPD-------IPSHEQVP----------KRISYAKLL-----GSFKRIIG---------------------------------------------VISSMVTRICGLFVAIFLSF----IHFLSMQCCGCCM-----------ISRSMVWQHSRALLIKRAVSARRDRKTIVFQLLIPVIFLLFGLLFLKLKPHP-DQPSVTLTT-SHFNPLLSGSGGGGPIPFDLSWPIAKEVTKYVKGGWIQRFKQTAYKFPDSDSALADAVE-AAGPALGP-VLLSMSEYLMSSFNESYQ--SRYGAVVMD-----------------------------------DV-YEDGSLGYTVLHNCSCQHAAPTYINVMNSAILRLATSDKNM-------------------------------TIRTRNHPLPMTKSQRLQHHDLDAFSAAIIVNIAFSFIPASFAVPLVKEREVKAKHQQLISGVSVISYWVSTYIWDFISFLFPSTFAIILFYVFGLDQFI-GRSFLPTVIMFLEYGLAVASSTYCLTFFFSDHTMAQNVVLLIHFFTGLILMVISFIMGLIKTTASANSFLKNFFRLSPGFCFADGLASLALLRQGMK--DKSSDG--------VFDWNVTGASICYLGVEGICYFLLTLGLELLPTCNLTPIRLMKWWRRKNLPGDTSVLEPLLKSSFETAIHLDEDTDVRTERHRV----LSGSIDNSI----IFLRNLRKVYPGGKNYCAKVAVDSLTFSVQAGECFGFLGTNGAGKTTTLSMLTGEESPTEGTAFIFGKDIASNPKAARRHIGYCPQFDALLEYLTVQEHLELYARIKGVLDYRINDVVMEKLVEFDLLKHANKPSYTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSSAD-LENLCRIIQERLFDIPS---HPRSLLDDLEVCIGGIDSIVSENASVAEISLSEEMIVIVGRWLGNEERIKTLISSRPISDGLFGEQLSEQLVRDGG-IPLPIFSEWWLAREKFSAIDSFVVSSFPGATFHGCNGL-SVKYQLPYREGLSLADVFGHLERNRNQLGIAEYSISQSTLETIFNHFAAN 1882
BLAST of mRNA_C-linearis_contig111.1505.1 vs. uniprot
Match: UPI000900D087 (ABC transporter A family member 1 isoform X1 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI000900D087) HSP 1 Score: 998 bits (2581), Expect = 0.000e+0 Identity = 725/2028 (35.75%), Postives = 1021/2028 (50.35%), Query Frame = 1
Query: 1015 KVGMAVIFNKAPLEGEVPQ-WDYTLRLNYTYGVSQFEEQATCLYPGCSLKYKLPSTLVTTSALERPPTSSHLWGYSYSGFLTLQKSVDEFILSRAAG---DRMYL---------------------NVSVGFFPEQAFRTDQFQQIITSTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALRMMGLPDLAYHSSWFITFQAQWLVTNLLILLVVWDSVFRYSDHWLVFVWLEAVALAVMAFCFLISTFFSRSKTAATLGSIIFFAAFFPYYFVGGNAVTDVATKTWASLFVPTCMALGTDTFAAFEGGLVGVQRSNV-RQSYEDRLPYVNMVTMLLIDAALYFVLAWYLDKVVPSEFGTPLPWHFPVSAPIEARRRAKRSMQQRQEVHSAVNAQAARALARRARQLKEWITKGSARDGSVNGGAEDLAMPLLPASSQRMSSREWVASTGLEGVHTYDEEGGARV-EPVGPQLSQQVVEGRTVSTRGLVKVYANGK---AAVKGLNLDLFEGHISVLLGHNGAGKSTAISMVTGTLPPTKGEAYLRGRKLSSDLAGVRRSLGVCFQQNTLFEELTVLQHLKLFAVVKGVRARDVDDEAARMVSEVGLVEKRDTPASALSGGQKRKLSVALAFIGGSEVVVLDEPTSGMDPFSRRSTWSVLQRQRKGRVILLTTHFMDEADTLGDRIAIMVEGELRCMGSSMFLKGLYGVGYTLTVMKTDQGDGTGYTSGSIDPWERRASTSSGSFMMRAEMQGGQDSLEALVLEFVPEALTVSKVGKERNYRLPFASASKFVDMFREID--------------RRKSELGVAGYGVSVTTLEEVFLRVGHGSDEPFLSGDPANRSSVDGTIPRTRLPSVELSPGPRGRAGSGSAHSSYYSFPSEHGGGRWKAGVGLGVAAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDNEPMIIGGESIHTELGWPPPSLAYTKKRIEGSAAGEADLDIDVDRA-SQGMFWMHFKALLAKRATYGLRDKKSQFFQLIVPTLLFLLGLILLRLSRNVFDQPSLLLSPGTHFNPGKSSTIRN-PVPLDAPRDEPESLASAVADRFDGVSVDGKSVTIPVGGAEDNFKGCAQGASA-----LVNMSDFLLDAAGPGEQGASRYGAIVLDGSSRLPNSSRLLLPNSRDEDGEEENGEGXXXEERGNVGYWAGSLAYGVLVNASAVHGAPIFMNLVNSAALQAIFASESSGEELESRSGXXXXXXXXXXXXXXXXXXRSLPSITVRSSPLPRTKGEEQTRQTIDGFTTAIMVVISMCFLPASYAIFVVKERAVKAKHQQIISGVGVVSYWASTFVFDVASYLIPFVVFLSLLYAFDIQSYTTSEAAGATALLFLFYGPAVAPFTYCISFLFESASSAQTMVLFVNFVTGLALMVVSFVLNLVESTRDVNAKLKWIYRLFPGFCLGDGLAQLVLCEDGKTCVDISSMGRGPPQKLTPLSWAITGADIASLVVTCIAYLVICLLIEY-------------------------GSTSPKLLGWSSPDPTTDTNSDXXXXXXDVAAEARRVERMGMGGTLGDMEGGGQVILNNLRKVYR--TKQGPKVAVQGLSFSVSRGDCFGFLGINGAGKSTTLGILSGDICPTRGQASIAGHDILTEQTKLRRYIGYCPQDDALLDLLTVEEHLLLYARIKGVKKTRLKDVADQKMQEMDLTPFRSVKACELSGGNKRKLSVAIAMIGNPRVVFLDEPSTGMDPIARRFMWDIISRMTTTDRECSVILTTHSMEEAESLCNNIGIMVNGRLRCLGSTQHLKHRFGRGFEADIKMRPPSNAEAVEVMQRIVKEDVDNLVGDELNSSRLRPPLENCCRRLERGDSDSGST----------------------RAGTLEAALNDGSGAF--LFDVLGSEGGTLPTRLFIDWYLCEERINDLNAFLEKTFPGAELVERPTLFSCRYKIPHQDGMNLADVFGHFEAAKAKLGLASYAVGQTTLEQIFNGFAAS 6792
K+ A+IF++ + PQ +DY++RLN+T+ S F + +T + L + L+ YS SGF TLQ+ +D FI+ A + +L N+ + FP + + D+FQ I+ +GI Y+L FLYP+SR + V EKE ++KE L MMGL D +H SWFIT+ Q+ V++++I L ++F+YSD LVFV+ A L+ + FLISTFF+R+KTA +G++ F AFFPYY V V+ V K AS PT ALG+ FA +E G VG++ SN+ R+S + ++ + M+L D LY + YLDKV+ E G PW+ W TK + G ++ + + ++ E + + EE V E + ++ QQ ++GR + R L KVY+ + +AVK L L L+E I LLGHNGAGKST ISM+ G LPPT G+A + G+ + +D+ +R+SLGVC Q + LF ELTV +HL++FA +KGV +D MV EVGL +K +T ALSGG KRKLS+ +A IG S+++VLDEPTSGMDP+S R TW +++R++KGR+ILLTTH MDEAD LGDRIAIM G L+C GSS+FLK +GVGYTLT++K G ++ +V + +P A VS+VG E +++LP AS+S F MFREI+ R +SVTTLEEVFLRV G + S + R T P +P +F S+ G ++ + IIG S L +T SA + S+ MFW H KALL KRA RD K+ FQL++P + L GL+ L+L + DQ S+ + ++FNP S P+P D + +A+ V G + T +E + A + L++MS++L+ + Q SRYGAI++D N D+ GSL Y +L N+S H AP F+N++NSA L+ +++ +I R+ PLP T+ + Q R +D F+ AI+V I+ F+PAS+A+ +VKER VKAKHQQ+ISGV ++SYW ST+++D S+L P + L F + + + TAL+F+ YG A+A TYC++F F S AQ +VL V+F TGL LMV+SF++ L+EST +N+ LK +RL PGFC DGLA L L G M K+ L W +TGA I L I Y ++ L +EY S S + L SS D + + + D DV E RV L + L NLRKVY GPK+AV L+FSV G+CFGFLG NGAGK+TTL +LSG+ P+ G A I G DI + RR+IGYCPQ DALL+ LTV EHL LYARIKGV + L+D+ K+ E DL + + LSGGNKRKLSVAIAMIGNP +V LDEPSTGMDPIA+RFMW++ISR++T + +VILTTHSM EA++LC IGIMV G+LRC+GS QHLK RFG E ++K S+ + +E + RIVKE + +L L S L +E C +E + ++ R L A +D SG L + L +GG +P +F +W+L +E+ + ++AF++ +FPGA L S +Y++P+ + ++LADVFGH E + +LG++ Y+V Q+TL+ IFN FAA+
Sbjct: 160 KIKGAIIFHE-----QGPQVFDYSIRLNHTWAFSGFPDVSTIMDTNGPFLNDLELGVNPVPILQ----------YSLSGFFTLQQVMDSFIIYAAQQIMTNSSFLQWGSSGTDFPVKIPWTEFSPSNIRIAPFPTREYTDDEFQSIVKEVMGILYLLGFLYPISRLISYSVLEKELKIKEGLYMMGLKDEIFHLSWFITYALQFAVSSVIITLCTMTTLFQYSDKSLVFVYFFAFGLSAITMSFLISTFFTRAKTAIAVGTLSFIGAFFPYYTVNDETVSMVL-KVMASFLSPTAFALGSINFADYERGHVGLRWSNIWRES--SGVCFLVCLLMMLFDTVLYGAIGLYLDKVLSRENGLHFPWNSTFWKSF-------------------------------------WRTKNT---GEHYASTSEVNL---------------IDNSDNESANLFGEEIYKPVRETISLEMKQQEIDGRCIQIRNLQKVYSTNRGNCSAVKSLQLSLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNILTDMDEIRKSLGVCPQYDILFSELTVKEHLEMFANIKGVSEDKIDSVVTEMVDEVGLADKLNTVVRALSGGMKRKLSLGIALIGNSKIIVLDEPTSGMDPYSMRLTWQLIKRKKKGRIILLTTHSMDEADVLGDRIAIMANGSLKCCGSSLFLKHHFGVGYTLTLVKAAP---------------------------------GPTAVADIVYKHIPSATCVSEVGTEISFKLPLASSSSFGSMFREIECFMKRSMPNYGTENRXXXXXXXXXXXISVTTLEEVFLRVAGGDFDQDESHE--EREGPVSCDTATLQPCQSYAP--------------KRTFRSKFCGTYFRIICFIAT-------------------------------------------------IIGRASY----------LIFTTVL---SALRFLSMQCXXXXILSRSMFWKHSKALLIKRAKSAQRDMKTIVFQLLIPAVFLLFGLLFLKLKPHP-DQQSVTFTT-SYFNPLLSGGGGGCPIPFDLNWPIEKEVANYVQG---GWIQKFQQTTYRFPDSEKALSDAIEAAGSTLGPILLSMSEYLMSSFNESYQ--SRYGAILMD--------------NQNDD----------------------GSLGYTILHNSSCQHSAPTFINVMNSAILRLATHNDNM-------------------------------TIVTRNHPLPMTESQHQQRHDLDAFSAAIVVAIAFSFIPASFAVAIVKEREVKAKHQQLISGVSILSYWTSTYIWDFISFLFPSSLALVFFCIFGLDQFVGKNSLFPTALMFVEYGLAIASSTYCLTFFFSEHSMAQNVVLMVHFFTGLILMVISFIMGLIESTAHLNSLLKIFFRLSPGFCFADGLASLALLRQG--------MKTDSDDKV--LDWDVTGASICYLAAEAIVYFLLTLGLEYLPHQRMNLSRAYEWWKGLKNSVYATSSISSEPLLQSSEDASLELDEDI-----DVKTERIRV--------LSGSTDNAIICLCNLRKVYAGGKHHGPKIAVHSLTFSVQEGECFGFLGTNGAGKTTTLSMLSGEEQPSDGTAFIFGRDICSNPKIARRHIGYCPQFDALLEFLTVREHLELYARIKGVPEYELEDIVMGKLVEFDLLKHANKPSFALSGGNKRKLSVAIAMIGNPPIVILDEPSTGMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMNEAQALCTRIGIMVGGKLRCIGSPQHLKTRFGNHLELEVKPIEVSSND-LENLCRIVKEKLFDL--PPLPRSIL-DDIEVCIGGIESSPASENASVAEISLSKEMIMAVGRWLGNEERVKALAFAPDDSSGYIEQLTEQLVRDGG-IPVPIFCEWWLAKEKFSAIDAFIQSSFPGATFQGCNGL-SVKYQLPYGEDLSLADVFGHIEMNREQLGISEYSVSQSTLDTIFNHFAAN 1900 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1505.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig111.1505.1 >prot_C-linearis_contig111.1505.1 ID=prot_C-linearis_contig111.1505.1|Name=mRNA_C-linearis_contig111.1505.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2327bp MAKPLVDSGARLAVRQMGAILKKNALVKAAHWRQTLAEITIPALFMLLLVback to top mRNA from alignment at C-linearis_contig111:406920..436392+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig111.1505.1 ID=mRNA_C-linearis_contig111.1505.1|Name=mRNA_C-linearis_contig111.1505.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=29473bp|location=Sequence derived from alignment at C-linearis_contig111:406920..436392+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig111:406920..436392+ >mRNA_C-linearis_contig111.1505.1 ID=mRNA_C-linearis_contig111.1505.1|Name=mRNA_C-linearis_contig111.1505.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=13962bp|location=Sequence derived from alignment at C-linearis_contig111:406920..436392+ (Chordaria linearis ClinC8C monoicous)back to top |