mRNA_C-linearis_contig111.1493.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig111.1493.1 vs. uniprot
Match: D7FKB7_ECTSI (Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB7_ECTSI) HSP 1 Score: 121 bits (303), Expect = 1.780e-28 Identity = 71/187 (37.97%), Postives = 102/187 (54.55%), Query Frame = 1
Query: 1 MFLAGGFSASPLLQAAARASFDEDGCRRVLVTLRPDVAIVKGAVLDANNTEVFATRKACLTYGARVLNVYDSSSPEHVSRRREYPEFGEDLKERIPV---FAANIIAGDDVPLDGACPKQRIFPIRKSQTSLDITILASHRKDVRFPDEDITFSLGTITIPMDMNTDNYKDRRLYVQFIFGGTELSV 552
+F+ GGFS PLL RA CR V V+ PD+AIV+GAV + + VF +R+A LTYGA VL+ +D + EH RR D ++ + V F +I G++VP +G ++ P+ + I + AS +D F DED F LG I+ P+DM ++R V+F FGG EL+V
Sbjct: 487 VFVVGGFSRCPLLMQVVRAELQNASCRVVEVS-EPDIAIVRGAVKYFDESAVFNSRRARLTYGASVLHAFDEKNAEHRRRRDAGETLKYDDRDEVMVDGCFFPHIRIGENVPTNGVTSRENYTPVSLENETNCIQVYASSARDPAFVDEDSCFMLGKISFPLDMTKKTRQERAYRVEFTFGGPELTV 672
BLAST of mRNA_C-linearis_contig111.1493.1 vs. uniprot
Match: UPI001E1D6972 (heat shock 70 kDa protein 12A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6972) HSP 1 Score: 79.0 bits (193), Expect = 9.380e-14 Identity = 56/184 (30.43%), Postives = 98/184 (53.26%), Query Frame = 1
Query: 1 MFLAGGFSASPLLQAAARASFDEDGCRRVLVTLRPDVAIVKGAVLDANNTEVFATRKACLTYGARVLNVYDSSSPEHVSRRREYPEFGEDLKERIPVFAANIIAGDDVPLDGACPKQRIFPIRKSQTSLDITILASHRKDVRFPDEDITFSLGTITIPMDMNTDNYKDRRLYVQFIFGGTELSV 552
+ L GGFS SP+LQ A R +F + +R+++ +A+++GAV+ +N +R A +YG RV D H S ++ + G +K + VFA ++ G ++ + A KQR P+ Q SL I S +D ++ + + +G + + + + K+R ++VQ IFGGTE++V
Sbjct: 420 ILLVGGFSESPILQEAIRKNFPD---KRLIIPEEAGLAVLRGAVIFGHNPVTIVSRIAKCSYGIRVYR--DFQDGVHPSNKKV--KIGGKIKCK-DVFAVHVKKGQELIVGEAQSKQRYTPLEADQISLVFDIYTSTEEDPQYVTDVGSEHVGQLEVEVP-DLSGGKERGVWVQMIFGGTEVTV 594
BLAST of mRNA_C-linearis_contig111.1493.1 vs. uniprot
Match: R7U0J5_CAPTE (Uncharacterized protein n=2 Tax=Capitella teleta TaxID=283909 RepID=R7U0J5_CAPTE) HSP 1 Score: 73.6 bits (179), Expect = 2.950e-12 Identity = 51/186 (27.42%), Postives = 91/186 (48.92%), Query Frame = 1
Query: 1 MFLAGGFSASPLLQAAARASFDEDGCRRVLVTLRPDVA--IVKGAVLDANNTEVFATRKACLTYGARVLNVYDSSSPEHVSRRREYPEFGEDLKERIPVFAANIIAGDDVPLDGACPKQRIFPIRKSQTSLDITILASHRKDVRFPDEDITFSLGTITIPMDMNTDNYKDRRLYVQFIFGGTELSV 552
+ + GGFS SP+LQAA + +F +RV V + D + ++ GAV +N + +R A +TYG + YD PE + + E ++++ V + G+ + + G + FP+ +QT + + + + DV + DE+ +G+ T P++ DR + + FG TEL V
Sbjct: 95 ILMVGGFSESPILQAAVKEAFG----KRVKVLIPDDASLCVLHGAVAFGHNPNIVTSRVARMTYGQEICKTYD---PEKHGADKRRVKVIESIEKQTNVMRIYVKRGEVIKV-GQVKEFTFFPVTVNQTEILTDVYCTEKSDVEYVDEEGVEHIGSWTTPLE---GKGLDREIETRVFFGETELVV 269
BLAST of mRNA_C-linearis_contig111.1493.1 vs. uniprot
Match: UPI001E1E1598 (heat shock 70 kDa protein 12A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1598) HSP 1 Score: 72.4 bits (176), Expect = 1.700e-11 Identity = 53/184 (28.80%), Postives = 93/184 (50.54%), Query Frame = 1
Query: 1 MFLAGGFSASPLLQAAARASFDEDGCRRVLVTLRPDVAIVKGAVLDANNTEVFATRKACLTYGARVLNVYDSSSPEHVSRRREYPEFGEDLKERIPVFAANIIAGDDVPLDGACPKQRIFPIRKSQTSLDITILASHRKDVRFPDEDITFSLGTITIPMDMNTDNYKDRRLYVQFIFGGTELSV 552
+ L GGFS SP+LQ A R +F + +R+++ +A++KGAV+ +N +R A +YG RV D H + ++ K+ VFA+++ G ++ + A QR P+ Q SL I S ++ + + ++G + + + + K+R ++VQ IFGGTE+ V
Sbjct: 403 ILLVGGFSESPMLQDAMRKNFRD---KRLIIPEDAGLAVLKGAVIFGHNPVTIVSRIAKFSYGVRVYR--DFQDGVHPNAKKVCVGGKVKCKD---VFASHVKKGQELVVGEAQSNQRYTPLEADQMSLIFDIYTSTEENPMYVTDAGCVNVGQLEVEVP-DLSGGKERGVWVQMIFGGTEIVV 577
BLAST of mRNA_C-linearis_contig111.1493.1 vs. uniprot
Match: C3ZGF9_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZGF9_BRAFL) HSP 1 Score: 72.0 bits (175), Expect = 2.290e-11 Identity = 61/185 (32.97%), Postives = 87/185 (47.03%), Query Frame = 1
Query: 1 MFLAGGFSASPLLQAAARASFDEDGCRRVLVTLRPDVAIVKGAVLDANNTEVFATRKACLTYGARVLNVYDSSSPEHVSRRREYPEFGEDLKER-IPVFAANIIAGDDVPLDGACPKQRIFPIRKSQTSLDITILASHRKDVRFPDEDITFSLGTITIPMDMNTDNYKDRRLYVQFIFGGTELSV 552
+FL GGFS SPLLQA R F RVLV +A+VKGAV + + + R + TYG + + YDS + + G+ + R + F + AG+ V L G K + + QT I + S+ K+V LG T+ M +T DR+L V F+FG TE+ V
Sbjct: 389 VFLVGGFSESPLLQADFRKRFSNRV--RVLVPNDASLAVVKGAVKFGHTPNLISERISPRTYGIKCASSYDS----------DLHKGGKVVHGRCMNAFHTFVEAGEPV-LVGTGKKHIFYALYPDQTQAGIKVYGSYDKEVHLTSAPGVQKLGVTTLDMP-DTTGGTDRQLEVTFLFGDTEIDV 559
BLAST of mRNA_C-linearis_contig111.1493.1 vs. uniprot
Match: A0A672FAI6_SALFA (Uncharacterized protein n=2 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FAI6_SALFA) HSP 1 Score: 68.6 bits (166), Expect = 3.570e-10 Identity = 55/187 (29.41%), Postives = 89/187 (47.59%), Query Frame = 1
Query: 1 MFLAGGFSASPLLQAAARASFDEDGCRRVLVTLRPDVAIVKGAVLDANNTEVFATRKACLTYGARVLNVYDSSSPEHVSRRREYPEFGEDLKERIPVFAANIIAGDDVPLDGACPKQRIF---PIRKSQTSLDITILASHRKDVRFPDEDITFSLGTITIPMDMNTDNYKDRRLYVQFIFGGTELSV 552
+ L GG+S S L+ G +VL LRP AI+ GAVL N V A+RK+ TYG + + +D S + RE +F D E+ ++ D+ D + R F P +QT++ + + RK+ ++ DE +G++ + M +T +DRR+ +Q FG TE+
Sbjct: 375 ILLVGGYSESETLRQHVINQIK--GQCKVLCPLRPQEAIMMGAVLFGRNPAVVASRKSAFTYGVKTIQTFDPS------KHREDKKFIADGIEKCGDLFYRLVEIDE---DVGWAETRDFSFVPTASTQTAMSFSFFRTERKNPQYVDEWGVEEIGSMKVSMP-DTTRGRDRRVKLQIKFGFTEMKA 549
BLAST of mRNA_C-linearis_contig111.1493.1 vs. uniprot
Match: R7TSW4_CAPTE (Uncharacterized protein n=3 Tax=Capitella teleta TaxID=283909 RepID=R7TSW4_CAPTE) HSP 1 Score: 67.8 bits (164), Expect = 6.620e-10 Identity = 49/186 (26.34%), Postives = 89/186 (47.85%), Query Frame = 1
Query: 1 MFLAGGFSASPLLQAAARASFDEDGCRRVLVTLRPDVA--IVKGAVLDANNTEVFATRKACLTYGARVLNVYDSSSPEHVSRRREYPEFGEDLKERIPVFAANIIAGDDVPLDGACPKQRIFPIRKSQTSLDITILASHRKDVRFPDEDITFSLGTITIPMDMNTDNYKDRRLYVQFIFGGTELSV 552
+ + GGFS SP+LQAA + +F +RV V + D + ++ GAV +N + +R A +TYG + YD PE + + E ++++ + + G+ + + G + P + T + + + + DV + DE+ +G+ T P++ DR + V+ FG TEL V
Sbjct: 388 ILMVGGFSESPILQAAVKEAFG----KRVKVLIPDDASLCVLHGAVAFGHNPNIVTSRVARMTYGQEIWKTYD---PETHGADKRRVKVTESIEKQTKIMHIYVKRGEVIKV-GQVKEFTFAPSMVNTTEILTNVYCTEKSDVEYVDEEGVEHIGSWTTPLE---GKGLDREIKVRVFFGETELVV 562
BLAST of mRNA_C-linearis_contig111.1493.1 vs. uniprot
Match: A0A1C9U2X8_MIZYE (Heat shock 70 kDa protein n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A1C9U2X8_MIZYE) HSP 1 Score: 65.9 bits (159), Expect = 3.030e-9 Identity = 52/184 (28.26%), Postives = 90/184 (48.91%), Query Frame = 1
Query: 1 MFLAGGFSASPLLQAAARASFDEDGCRRVLVTLRPDVAIVKGAVLDANNTEVFATRKACLTYGARVLNVYDSSSPEHVSRRREYPEFGEDLKERIPVFAANIIAGDDVPLDGACPKQRIFPIRKSQTSLDITILASHRKDVRFPDEDITFSLGTITIPMDMNTDNYKDRRLYVQFIFGGTELSV 552
+ L GGFS SP++QAA R +F + +RV++ ++++KGAV+ + E +R +YGAR++ ++ + + R D + VF++ + AG VPL QTS+ + I S + + D+D LG + I ++ + ++R L V + FG TEL V
Sbjct: 388 LLLVGGFSESPMVQAAIRKAFPD---KRVIIPDEAGLSVLKGAVIYGHTPETITSRIIRYSYGARIVPDFNPRKHRNDKKCRIA-----DTDRCLDVFSSFMKAGTSVPLHHK-EISGYSTTTPCQTSMMLKIYHSPEESPEYTDDDDCEPLGEMEI--EVPDPSNEERSLIVLYEFGDTELKV 560
BLAST of mRNA_C-linearis_contig111.1493.1 vs. uniprot
Match: UPI001458B558 (heat shock 70 kDa protein 12B-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458B558) HSP 1 Score: 65.9 bits (159), Expect = 3.030e-9 Identity = 58/187 (31.02%), Postives = 95/187 (50.80%), Query Frame = 1
Query: 1 MFLAGGFSASPLLQAAARASFDEDGCRRVLVTLRPDVAIVKGAVLDANNTEVFATRKACLTYGARVLNVYDSSSPEHVSRRREYPEFGEDLKER-IPVFAANIIAGDDVPL--DGACPKQRIFPIRKSQTSLDITILASHRKDVRFPDEDITFSLGTITIPMDMNTDNYKDRRLYVQFIFGGTELSV 552
+ L GGFS SP++QAA R +F + +RV++ ++++KGAV+ + + +R TYG R+ V D ++ +H R + K+R + VF++ + AG VP+ C P Q S+ + I S + + D+D LG + I + N N +DR L V + FG TEL+V
Sbjct: 388 LLLVGGFSDSPMVQAAIRKAFPD---KRVIIPSEAGLSVLKGAVIYGHKPDTIDSRIVRYTYGVRI--VPDFNTMKH----RNDKKCQISGKDRCLDVFSSFMQAGTSVPVHHQKLCSYSTTTPC---QESMMLKIYQSTEESPEYTDDDCCKLLGEMEIKVP-NPSN-EDRDLLVVYDFGDTELTV 560
BLAST of mRNA_C-linearis_contig111.1493.1 vs. uniprot
Match: A0A8B6GHY4_MYTGA (Uncharacterized protein (Fragment) n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GHY4_MYTGA) HSP 1 Score: 65.5 bits (158), Expect = 4.140e-9 Identity = 46/188 (24.47%), Postives = 93/188 (49.47%), Query Frame = 1
Query: 1 MFLAGGFSASPLLQAAARASFDEDGCRRVLVTLRPDVAIVKGAVLDANNTEVFATRKACLTYGARVLNVY----DSSSPEHVSRRREYPEFGEDLKERIPVFAANIIAGDDVPLDGACPKQRIFPIRKSQTSLDITILASHRKDVRFPDEDITFSLGTITIPMDMNTDNYKDRRLYVQFIFGGTELSV 552
+ + GGFS SP+LQAA +++F + V++ +A++KGAV N +V + R T+G + D +H + + Y ++R F ++ G+ + + K+ P++++Q+ +++ I +S +D ++ DE +G + D++ DR + + FGGT+L+V
Sbjct: 402 ILMVGGFSESPVLQAAIKSAFQS---KTVIIPEDAGLAVLKGAVQFGFNPKVISPRILRYTFGFGTNMQFRPHTDPEDKKHFTNNKMY------CRDR---FGKHVARGEPMESEEVTNKKTYNPLKETQSKIELPIYSSRSEDPQYVDEADCTYIGKFEV--DLSNVRGSDREVEIGMRFGGTDLAV 575 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig111.1493.1 >prot_C-linearis_contig111.1493.1 ID=prot_C-linearis_contig111.1493.1|Name=mRNA_C-linearis_contig111.1493.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=189bp MFLAGGFSASPLLQAAARASFDEDGCRRVLVTLRPDVAIVKGAVLDANNTback to top mRNA from alignment at C-linearis_contig111:193346..193912+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig111.1493.1 ID=mRNA_C-linearis_contig111.1493.1|Name=mRNA_C-linearis_contig111.1493.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=567bp|location=Sequence derived from alignment at C-linearis_contig111:193346..193912+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig111:193346..193912+ >mRNA_C-linearis_contig111.1493.1 ID=mRNA_C-linearis_contig111.1493.1|Name=mRNA_C-linearis_contig111.1493.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1134bp|location=Sequence derived from alignment at C-linearis_contig111:193346..193912+ (Chordaria linearis ClinC8C monoicous)back to top |