mRNA_C-linearis_contig111.1490.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig111.1490.1
Unique NamemRNA_C-linearis_contig111.1490.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig111.1490.1 vs. uniprot
Match: A0A6H5JMM1_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM1_9PHAE)

HSP 1 Score: 502 bits (1292), Expect = 1.200e-165
Identity = 268/390 (68.72%), Postives = 315/390 (80.77%), Query Frame = 1 
Query:   67 GYGERRRGFVRVESQEEAEQ------------RQPQQVVPSPGASEGCFIQCGRRKFQFNLMVGTILLYMLVSMSLTLLDKWLITGLGFKAPLALICSTYLIMHLASLTIRGFIVHQGPVDEAGSGGTKLLVQQLTWHQWAWKVFPVAAASGLEVGTSTLGLQVMNVGIHTMVRSTVPIFVLLFSVGLGLQEPRCGLLLVVLLVSGGVALMFSGQGADRQEDLPMEGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAAAAGEKIHPFTLLHYMSISSAATLVPFVVWLERDALHDMSATFGLERMVKTALLIVLVSLLALVLVLTEFTFIKKVSSLSLCIIAVIKELVLVLWSVGVRGEYLSERTGLGFFVAMIGVTLYKLVPKGPPQ 1200
            GYG+RRRGF RV S EE E             R  QQ +    + +G  ++CG RK Q NL++G ILLYM VSMSLTLLDKWL+TG+GF APL LI  TYLIMHL SL+ R ++ H+G  +  G G    LVQ+++WHQWAWKVFPVAAASGLEVGTS LGL+VM+VG+HTMVRSTVPIFVLLFSVG+GLQE RCGLL VV+LVSGGV L+FSGQ +D++E+ PM+GFLLTLLSGMLAGLKWTLSQVLLQGRGLYG+GA   GE IHPFTLLHYMS+SSAA+LVPF + LE  +LH+M+ TF   RMVKT L+IV VSLLA +LVL EF+FI++VSSLSLCIIAV+KEL+LV++SV V GE+LS RTGLGFFV M+GVTLYKLVPKGPPQ
Sbjct:    7 GYGDRRRGFNRVSSTEEQEGDIEHVLVSKSSGRARQQALVHANSDDGGVMRCGSRKVQVNLILGIILLYMWVSMSLTLLDKWLMTGMGFNAPLTLISLTYLIMHLVSLSTRTWLRHRGVEEGEGGGDASHLVQRVSWHQWAWKVFPVAAASGLEVGTSALGLKVMHVGVHTMVRSTVPIFVLLFSVGMGLQEFRCGLLAVVMLVSGGVTLLFSGQRSDQEENFPMDGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGKGAITVGEHIHPFTLLHYMSLSSAASLVPFALTLELGSLHEMAVTFSGHRMVKTGLMIVAVSLLAFMLVLAEFSFIRRVSSLSLCIIAVVKELLLVMFSVLVLGEHLSGRTGLGFFVTMVGVTLYKLVPKGPPQ 396
[Close]
BLAST of mRNA_C-linearis_contig111.1490.1 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI)

HSP 1 Score: 482 bits (1241), Expect = 4.110e-155
Identity = 252/340 (74.12%), Postives = 291/340 (85.59%), Query Frame = 1 
Query:  181 QCGRRKFQFNLMVGTILLYMLVSMSLTLLDKWLITGLGFKAPLALICSTYLIMHLASLTIRGFIVHQGPVDEAGSGGTKLLVQQLTWHQWAWKVFPVAAASGLEVGTSTLGLQVMNVGIHTMVRSTVPIFVLLFSVGLGLQEPRCGLLLVVLLVSGGVALMFSGQGADRQEDLPMEGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAAAAGEKIHPFTLLHYMSISSAATLVPFVVWLERDALHDMSATFGLERMVKTALLIVLVSLLALVLVLTEFTFIKKVSSLSLCIIAVIKELVLVLWSVGVRGEYLSERTGLGFFVAMIGVTLYKLVPKGPPQ 1200
            +C  RK Q NL++G +LLY+ VSMSLTLLDKWL+TG+GF APL LI  TYLIMHL SL+IR ++ H+G  +  G G    LVQ+L+WHQWAWKVFPVAAASGLEVGTS LGL+VM+VG+HTMVRSTVPIFVLLFSVG+GLQE RCGLL VV+LVSGGV L+FSGQ  D++ED PM+GFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGA   GE IHPFTLLHYMS+SSAA+LVPF + LE  ALH+M+ TF   R+VKT L+IV VSLLA +LVL EF+FI++VSSLSLCIIAV+KEL+LV++SV V GE+LS RTGLGFFV MIGVTLYKLVPKGPPQ
Sbjct:  265 KCASRKVQVNLILGIVLLYIWVSMSLTLLDKWLMTGMGFNAPLTLISLTYLIMHLVSLSIRTWLRHRGVEEGEGGGDASHLVQRLSWHQWAWKVFPVAAASGLEVGTSALGLKVMHVGVHTMVRSTVPIFVLLFSVGMGLQEFRCGLLAVVMLVSGGVTLLFSGQRNDQEEDFPMDGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAITVGEHIHPFTLLHYMSLSSAASLVPFALALELGALHEMAVTFSGHRIVKTGLMIVAVSLLAFMLVLAEFSFIRRVSSLSLCIIAVVKELLLVMFSVLVLGEHLSGRTGLGFFVTMIGVTLYKLVPKGPPQ 604
[Close]
BLAST of mRNA_C-linearis_contig111.1490.1 vs. uniprot
Match: A0A8C5MFI8_9ANUR (Solute carrier family 35 member C2 n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MFI8_9ANUR)

HSP 1 Score: 125 bits (314), Expect = 1.630e-27
Identity = 107/327 (32.72%), Postives = 170/327 (51.99%), Query Frame = 1 
Query:  211 LMVGTILLYMLVSMSLTLLDKWLITGLGFKAPLALICSTYLIMHLASLTIRGFIVHQGPVDEAGSGGTKLLVQQLTWHQWAWKVFPVAAASGLEVGTSTLGLQVMNVGIHTMVRSTVPIFVLLFSVGLGLQEPRCGLLLVVLLVSGGVALMFSGQGADRQEDLPMEGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAAAAGEKIHPFTLLHYMSISSAATLVPFVVWLERDALHDMSATFGLERMVKTALLIVLVS------LLALVLVLTEFTFIKKVSSLSLCIIAVIKELVLVLWSVGVRGEYLSERTGLGFFVAMIGVTLY 1173
            L VG +L Y   S+ +T  +KWL+    F  PL +     L+++L S   R  I          +G T+++   L W  +  KV P A A+ L++G S      + V ++TM +S+  +F+L FS+   L+E R GL+LVVLL+SGG+  MF+     +      EGFLL L +  L G++WTL+Q+L+Q   L  +    A   + P   L ++S+        F ++L  + LH ++ +  L R   T  L+VL+S      LLA  L  +EF  + K SSL+L I  + KEL ++L +  + G+ +S    LGF V + G+ L+
Sbjct:   14 LTVGLVLFYYCFSIGITFYNKWLLKR--FHLPLFMTMVHLLMIYLLSAVCRELIA-------CYNGRTRVM---LLWTDYLKKVAPTALATALDIGLSNWSFLYITVSLYTMTKSSAVLFILFFSLLFKLEEARAGLILVVLLISGGL-FMFT----FKATQFDTEGFLLVLAASCLGGVRWTLTQILMQKAELGLQNPIDAMFHLQP---LMFLSL--------FPLFLGIEGLH-LTTSEQLFRSHDTHGLVVLLSTLCAGGLLAFGLGYSEFLLVSKTSSLTLSIAGIFKELCVLLLATHLLGDEMSLVNWLGFAVCICGIALH 311
[Close]
BLAST of mRNA_C-linearis_contig111.1490.1 vs. uniprot
Match: A0A8N7WQQ5_SPOFR (solute carrier family 35 member C2-like n=2 Tax=Spodoptera TaxID=7106 RepID=A0A8N7WQQ5_SPOFR)

HSP 1 Score: 125 bits (314), Expect = 4.050e-27
Identity = 94/325 (28.92%), Postives = 177/325 (54.46%), Query Frame = 1 
Query:  199 FQFNLM-VGTILLYMLVSMSLTLLDKWLITGLGFKAPLALICSTYLIMHLASLTIRGFIVHQGPVDEAGSGGTKLLVQQLTWHQWAWKVFPVAAASGLEVGTSTLGLQVMNVGIHTMVRSTVPIFVLLFSVGLGLQEPRCGLLLVVLLVSGGVALMFSGQGADRQEDLPMEGFLLTLLSGMLAGLKWTLSQVLLQGR--GLYGRGAAAAGEKIHPFTLLHYMSISSAATLVPFVVWLERDALHDMSATFGLERMVKTALLIVLVSLLALVLVLTEFTFIKKVSSLSLCIIAVIKELVLVLWSVGVRGEYLSERTGLGFFVAMIGV 1164
            FQ +L+ +G ILLY  +S+ LT   +WL+T   FK PL ++    ++  L ++ +R        V +  +G  +L++  +T  +    V P   ASG++VG S  GL+++ + ++TM +ST  IF+LLF++ LGL++    L+ +VL++S G+ +MF+     +     + GF   L++   AGL+WT +Q+L+Q    GL+           +P  ++ ++      +L+PF +  E  A +D       E+++ T L + + + +A  + ++EF  +   SSL+L I  + KE+ +++ +V V G+ LS    +G  V ++G+
Sbjct:   33 FQKSLLSLGLILLYFALSIGLTFYQRWLLTD--FKFPLTVVMYHLIVKWLLAVCVR-------VVLQLITGTPQLILPCMTCLK---SVGPTGLASGIDVGFSNWGLELVTISLYTMTKSTTIIFILLFAIVLGLEKKSWSLVGIVLMISAGL-IMFT----YKATQFNLLGFNFLLIASFAAGLRWTFAQLLMQKSKLGLH-----------NPVDMVFHVQPWMFVSLLPFTIMFEGVACYDYLQKLSAEKLLPTILKVSVGATIAFAMEISEFLVVTYTSSLTLSISGIFKEMCILVLAVEVSGDVLSPINVVGLAVCLLGI 329
[Close]
BLAST of mRNA_C-linearis_contig111.1490.1 vs. uniprot
Match: UPI001C05DC04 (solute carrier family 35 member C2 n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C05DC04)

HSP 1 Score: 122 bits (307), Expect = 1.540e-26
Identity = 92/322 (28.57%), Postives = 169/322 (52.48%), Query Frame = 1 
Query:  217 VGTILLYMLVSMSLTLLDKWLITGLGFKAPLALICSTYLIMHLASLTIRGFIVHQGPVDEAGSGGTKLLVQQLTWHQWAWKVFPVAAASGLEVGTSTLGLQVMNVGIHTMVRSTVPIFVLLFSVGLGLQEPRCGLLLVVLLVSGGVALMFSGQGADRQEDLPMEGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAAAAGEKIHPFTLLHYMSISSAATLVPFVVWLERDALHDMSATFGLERMVKTALLIVLVSL---LALVLVLTEFTFIKKVSSLSLCIIAVIKELVLVLWSVGVRGEYLSERTGLGFFVAMIGVTLY 1173
            VG +LLY + S+ +T  +KWL+ G  +   + L+  T +  +L++LT          + ++ +G  +++   L+W  + WKV P A A+ L++G S      + + ++TM +S+  +F+L FS+   L+EP+  L+LVVLL+S G+  MF+ +         +EGF++ LL+  + G++WTL+QVL+Q   L  +    A   + P   L         +L P  ++ E  +L      F +  +      ++ +S+   LA  L  +EF  + + SSL+L I  + KE+  ++ +  + G+ LS    LGF V + G++L+
Sbjct:   15 VGLVLLYYVFSIGITFYNKWLMKGFHYPIFMTLVHLT-VNFYLSALTRW--------IMQSCTGKQRVI---LSWRDYLWKVAPTALATALDIGLSNWSFLFITISLYTMTKSSAVLFILFFSLVFKLEEPKPFLILVVLLISSGL-FMFTFESTQFN----LEGFIMVLLASFIGGIRWTLTQVLMQKAELGLQNPIDAMYHLQPLMFL---------SLFPLFLYNEALSLSTSEKLFRVTELYPLLYSLITLSIGGSLAFGLGFSEFLLVSRTSSLTLSISGIFKEVCTLVLAGPLMGDKLSAVNWLGFAVCLCGISLH 310
[Close]
BLAST of mRNA_C-linearis_contig111.1490.1 vs. uniprot
Match: A0A8C2ZB59_CYCLU (TPT domain-containing protein n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C2ZB59_CYCLU)

HSP 1 Score: 121 bits (304), Expect = 4.390e-26
Identity = 94/324 (29.01%), Postives = 170/324 (52.47%), Query Frame = 1 
Query:  217 VGTILLYMLVSMSLTLLDKWLITGLGFKAPLALICSTYLIMH--LASLTIRGFIVHQGPVDEAGSGGTKLLVQQLTWHQWAWKVFPVAAASGLEVGTSTLGLQVMNVGIHTMVRSTVPIFVLLFSVGLGLQEPRCGLLLVVLLVSGGVALMFSGQGADRQEDLPMEGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAAAAGEKIHPFTLLHYMSISSAATLVPFVVWLERDALHDMSATFG---LERMVKTALLIVLVSLLALVLVLTEFTFIKKVSSLSLCIIAVIKELVLVLWSVGVRGEYLSERTGLGFFVAMIGVTLY 1173
            VG +LLY + S+ +T  +KWL+TG  +   + L+   +L M+  L++LT R          +  +G  +++   L+W  +  KV P A A+ L++G S      + + ++TM +S+  +F+L FSV   L+EP   L+LVVLL+S G+  MF+ +         +EGF++ LL+  + G++WTL+QVL+Q         A  G + +P   L+++       L P  ++ E  +L      F    L  ++ +   + +  +LA  L  +EF  + + SSL+L I  + KE+  +  +  + G+ +S   GLGF + + G++L+
Sbjct:   15 VGLVLLYYVFSIGITFYNKWLMTGFHYPLFMTLV---HLTMNFCLSALTRRAM--------QCWTGKPRII---LSWKDYLRKVAPTALATALDIGLSNWSFLFITISLYTMTKSSAVLFILFFSVVFKLEEPNPYLILVVLLISSGL-FMFTFEATQFN----LEGFIMVLLASFIGGIRWTLTQVLMQ--------KAELGLQ-NPIDTLYHLQPLMLIGLFPLFLYNEGLSLSTTEKLFRGTELSPVLYSVFTMSIGGMLAFGLGFSEFLLVSRTSSLTLSISGIFKEVCTLFLAAHLMGDTMSMFNGLGFAICLCGISLH 310
[Close]
BLAST of mRNA_C-linearis_contig111.1490.1 vs. uniprot
Match: A0A4Z2FNH5_9TELE (Solute carrier family 35 member C2 n=1 Tax=Liparis tanakae TaxID=230148 RepID=A0A4Z2FNH5_9TELE)

HSP 1 Score: 120 bits (301), Expect = 1.040e-25
Identity = 97/323 (30.03%), Postives = 167/323 (51.70%), Query Frame = 1 
Query:  217 VGTILLYMLVSMSLTLLDKWLITGLGFKAPLALICSTYLIMH-LASLTIRGFIVHQGPVDEAGSGGTKLLVQQLTWHQWAWKVFPVAAASGLEVGTSTLGLQVMNVGIHTMVRSTVPIFVLLFSVGLGLQEPRCGLLLVVLLVSGGVALMFSGQGADRQEDLPMEGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAAAAGEKIHPFTLLHYMSISSAATLVPFVVWLERDALHDMSATFG---LERMVKTALLIVLVSLLALVLVLTEFTFIKKVSSLSLCIIAVIKELVLVLWSVGVRGEYLSERTGLGFFVAMIGVTLY 1173
            +G +L Y + S+ +T  +KWL+ G  F+ PL +      I   LA+LT R          +  +G  ++L   L+W  +  KVFP A A+ L++G S      + + ++TM +S+  +F+L FS+   L+EP   L+LVVLL++ G+  MF+ +         +EGF + LL+  + G++WTL+QVL+Q         A  G + +P   L+++       L P  ++ E  +L +    F    L  ++ T L +    LLA  L  +EF  + + SSL+L I  + KE+  ++ +  V G+ +S    LGF V + G++L+
Sbjct:   15 LGLVLFYYVFSIGITFYNKWLMKG--FRYPLFMTLVHLAINFCLAALTRRAM--------QCWAGKPRIL---LSWKDYLRKVFPTALATALDIGLSNWSFLFITISLYTMTKSSSVLFILFFSLVFKLEEPNPFLILVVLLIASGL-FMFTFESTQFN----LEGFTMVLLASFIGGIRWTLTQVLMQ--------KAELGLQ-NPIDALYHLLPLMFVGLFPLFLYNEGLSLSNSEKLFRATELSPVLYTLLTLTAGGLLAFGLCFSEFLLVSRTSSLTLSIAGIFKEVCTLILAAAVMGDRMSVFNWLGFSVCLSGISLH 310
[Close]
BLAST of mRNA_C-linearis_contig111.1490.1 vs. uniprot
Match: A0A3B5Q4M5_XIPMA (TPT domain-containing protein n=12 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3B5Q4M5_XIPMA)

HSP 1 Score: 120 bits (301), Expect = 1.100e-25
Identity = 94/322 (29.19%), Postives = 165/322 (51.24%), Query Frame = 1 
Query:  217 VGTILLYMLVSMSLTLLDKWLITGLGFKAPLALICSTYLIMHLASLTIRGFIVHQGPVDEAGSGGTKLLVQQLTWHQWAWKVFPVAAASGLEVGTSTLGLQVMNVGIHTMVRSTVPIFVLLFSVGLGLQEPRCGLLLVVLLVSGGVALMFSGQGADRQEDLPMEGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAAAAGEKIHPFTLLHYMSISSAATLVPFVVWLERDALHDMSATFGLERMVKTALLIVLVSL---LALVLVLTEFTFIKKVSSLSLCIIAVIKELVLVLWSVGVRGEYLSERTGLGFFVAMIGVTLY 1173
            VG +LLY + S+ +T  +KWL+ G  +   + L+    +   L++LT R        V +  +G  +++   LTW  +  KV P A A+ L++G S      +++ ++TM +S+  +F+L FS+   L+EP   L+LVVLL+S G+  MF+ +         MEGF++ LL+  + G++WTL+QVL+Q   L  +    A   + P   L          L P  ++ E  +L      F +  +      +V++S+   LA  L  +EF  + K S L+L I  + KE+  ++ +  + G+ +S    LGF V + G++L+
Sbjct:   15 VGLVLLYYVFSIGITFYNKWLMKGFHYPLFMTLV-HLGVNFCLSALTRR--------VMQCWTGKPRII---LTWEDYLRKVAPTALATALDIGLSNWSFLFISISLYTMTKSSAVLFILFFSLVFKLEEPNPFLILVVLLISSGL-FMFTFESTQFN----MEGFIMVLLASFIGGIRWTLTQVLMQKAELGLQNPIDAMYHLQPLMFLG---------LFPLFLYNEALSLSASEKLFRVTELSPLLYSLVMLSVGGTLAFGLGFSEFLLVSKTSGLTLSISGIFKEVCTLVLAASLMGDRMSNLNWLGFAVCLCGISLH 310
[Close]
BLAST of mRNA_C-linearis_contig111.1490.1 vs. uniprot
Match: A0A250X3A7_9CHLO (TPT domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X3A7_9CHLO)

HSP 1 Score: 121 bits (303), Expect = 1.260e-25
Identity = 95/306 (31.05%), Postives = 156/306 (50.98%), Query Frame = 1 
Query:  400 GSGGTKLLVQQLTWHQWAWKVFPVAAASGLEVGTSTLGLQVMNVGIHTMVRSTVPIFVLLFSVGLGLQEPRCGLLLVVLLVSGGVALMFSGQGADRQEDLPMEGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAAAAGEKIHPFTLLHYMS-ISSAATLVPFVVWLERDALHDMSATF-GLERMVKTALLIVLVSLLALVLVLTEFTFIKKVSSLSLCIIAVIKELVLVLWSVGVRGEYLSERTGLGFFVAMIGVTLYKL-----VPKGPPQLRYEPAPKNAERHIPSGRGSPSARLSRGGDVE 1296
            GSG  K   + L+W +W   V P    +GL++  S + L  +++  +TM ++TVP+F+L F+   G+++P   L LVV+ +S G+ L+  G+      D  + GF L +++  ++GL++TL+QV LQG       +AA G    P  +L  ++ + S   LV  +VW         SA F  LE +  T +LI + ++LA +LV TE+  IK+ S+L+  I    KE+V VL ++ V G+       LG  + + GV L+ +     + KG   +R     + A         SP   +S  GD E
Sbjct:   82 GSGLCKRTAEPLSWQEWFRSVVPNGTCTGLDISLSMMSLVFISLSFYTMCKATVPLFLLAFAFLWGIEKPNWRLGLVVITISCGLILLVRGE-----TDFDVAGFTLVMVAACMSGLRFTLTQVFLQGH----YESAALGS---PLEILEALTPVMSCTVLVASLVWERLWVTLPSSAYFENLEEIGLTLILIFVGAVLAFLLVWTEYRLIKETSALTFMIAGTCKEIVTVLLAIMVMGDSFGYVNALGLLIVIAGVILFNMYKWQKIKKGDSSVRSPSTTRKA---------SPETDVSESGDQE 366
[Close]
BLAST of mRNA_C-linearis_contig111.1490.1 vs. uniprot
Match: A0A8J9RN42_9CHLO (Solute carrier family 35 member C2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RN42_9CHLO)

HSP 1 Score: 122 bits (305), Expect = 1.270e-25
Identity = 94/318 (29.56%), Postives = 159/318 (50.00%), Query Frame = 1 
Query:  259 TLLDKWLITGLG----------FKAPLALICSTYLIMHLASLTIRGF--IVHQGPVDEAGSGGTKLLVQQLTWHQWAWKVFPVAAASGLEVGTSTLGLQVMNVGIHTMVRSTVPIFVLLFSVGLGLQEPRCGLLLVVLLVSGGVALMFSGQGADRQEDLPMEGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAAAAGEKIHPFTLLHYMSISSAA-TLVPFVVWLERDALHDMSATFGLERMVKTALLIVLVSLLALVLVLTEFTFIKKVSSLSLCIIAVIKELVLVLWSVGVRGEYLSERTGLGFFVAMIGVTLY 1173
            TLL  W  T LG          F AP+ +    +    + + T+ G   +    P D             LTW ++   V P  AA+GL++G S   L ++ +  +TM +ST P+F+L F    G++ P   L  VVL++S G+ L+ +G+      D  + GF++ +++  L+GL+WT++QVLLQG   +G GA+    ++    L+  MS++ A  +L    +WL    L        ++ +  T +L++    +A  +V TEFT I + S+L+  +    KE+V V+ +V   GE  S   G+G  V ++GV L+
Sbjct:   67 TLLSLWNRTLLGKGHGVLGKGAFPAPMLMSSLQFAAQIVMAKTVLGLGIVKRHKPAD-------------LTWREFFVHVVPNGAATGLDIGLSNFSLSLITLSFYTMCKSTTPVFLLGFCFLWGIESPSWNLAAVVLIISFGLGLLVAGE-----TDFNLAGFVIVMVASALSGLRWTITQVLLQGSNAHGTGASGGPVEVL-LALMPVMSVTVAIMSLTIERLWL---VLPGSPYFDSIQSLATTTMLMLFGGTIAFFMVWTEFTVIAETSALTFMVAGTFKEIVTVMAAVIFLGESFSFINGVGLVVLIMGVALF 362
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMM1_9PHAE1.200e-16568.72TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FL66_ECTSI4.110e-15574.12TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8C5MFI8_9ANUR1.630e-2732.72Solute carrier family 35 member C2 n=1 Tax=Leptobr... [more]
A0A8N7WQQ5_SPOFR4.050e-2728.92solute carrier family 35 member C2-like n=2 Tax=Sp... [more]
UPI001C05DC041.540e-2628.57solute carrier family 35 member C2 n=1 Tax=Melanot... [more]
A0A8C2ZB59_CYCLU4.390e-2629.01TPT domain-containing protein n=1 Tax=Cyclopterus ... [more]
A0A4Z2FNH5_9TELE1.040e-2530.03Solute carrier family 35 member C2 n=1 Tax=Liparis... [more]
A0A3B5Q4M5_XIPMA1.100e-2529.19TPT domain-containing protein n=12 Tax=Cyprinodont... [more]
A0A250X3A7_9CHLO1.260e-2531.05TPT domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A8J9RN42_9CHLO1.270e-2529.56Solute carrier family 35 member C2 n=1 Tax=Coccomy... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:166478..176133 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.0
Seed ortholog evalue1.8e-133
Seed eggNOG ortholog2880.D7FL66
KEGG koko:K15280
KEGG TC2.A.7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.UDP-glucose transmembrane transport
EggNOG OGsCOG0697@1,KOG1443@2759
Ec32 ortholog descriptionTriose-phosphate transporter domain
Ec32 orthologEc-19_005320.1
COG Functional cat.EG
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons10
Model size2801
Cds size1611
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1490.1prot_C-linearis_contig111.1490.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig111 167623..176088 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927482.123256-UTR-C-linearis_contig111:166477..1676221622927482.123256-UTR-C-linearis_contig111:166477..167622Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 166478..167622 -
1690879726.2538521-UTR-C-linearis_contig111:166477..1676221690879726.2538521-UTR-C-linearis_contig111:166477..167622Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 166478..167622 -
1622927482.2515612-UTR-C-linearis_contig111:176088..1761331622927482.2515612-UTR-C-linearis_contig111:176088..176133Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 176089..176133 -
1690879726.3627656-UTR-C-linearis_contig111:176088..1761331690879726.3627656-UTR-C-linearis_contig111:176088..176133Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 176089..176133 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927482.1377656-CDS-C-linearis_contig111:167622..1680771622927482.1377656-CDS-C-linearis_contig111:167622..168077Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 167623..168077 -
1690879726.268422-CDS-C-linearis_contig111:167622..1680771690879726.268422-CDS-C-linearis_contig111:167622..168077Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 167623..168077 -
1622927482.1481812-CDS-C-linearis_contig111:168607..1687371622927482.1481812-CDS-C-linearis_contig111:168607..168737Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 168608..168737 -
1690879726.2767637-CDS-C-linearis_contig111:168607..1687371690879726.2767637-CDS-C-linearis_contig111:168607..168737Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 168608..168737 -
1622927482.1607704-CDS-C-linearis_contig111:169429..1695431622927482.1607704-CDS-C-linearis_contig111:169429..169543Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 169430..169543 -
1690879726.2844162-CDS-C-linearis_contig111:169429..1695431690879726.2844162-CDS-C-linearis_contig111:169429..169543Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 169430..169543 -
1622927482.1722348-CDS-C-linearis_contig111:170096..1701991622927482.1722348-CDS-C-linearis_contig111:170096..170199Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 170097..170199 -
1690879726.2928135-CDS-C-linearis_contig111:170096..1701991690879726.2928135-CDS-C-linearis_contig111:170096..170199Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 170097..170199 -
1622927482.188075-CDS-C-linearis_contig111:170593..1706791622927482.188075-CDS-C-linearis_contig111:170593..170679Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 170594..170679 -
1690879726.3013961-CDS-C-linearis_contig111:170593..1706791690879726.3013961-CDS-C-linearis_contig111:170593..170679Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 170594..170679 -
1622927482.1984348-CDS-C-linearis_contig111:171130..1712951622927482.1984348-CDS-C-linearis_contig111:171130..171295Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 171131..171295 -
1690879726.3105638-CDS-C-linearis_contig111:171130..1712951690879726.3105638-CDS-C-linearis_contig111:171130..171295Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 171131..171295 -
1622927482.208755-CDS-C-linearis_contig111:171663..1717741622927482.208755-CDS-C-linearis_contig111:171663..171774Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 171664..171774 -
1690879726.3202465-CDS-C-linearis_contig111:171663..1717741690879726.3202465-CDS-C-linearis_contig111:171663..171774Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 171664..171774 -
1622927482.2209342-CDS-C-linearis_contig111:172484..1726901622927482.2209342-CDS-C-linearis_contig111:172484..172690Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 172485..172690 -
1690879726.330624-CDS-C-linearis_contig111:172484..1726901690879726.330624-CDS-C-linearis_contig111:172484..172690Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 172485..172690 -
1622927482.2306075-CDS-C-linearis_contig111:174955..1750371622927482.2306075-CDS-C-linearis_contig111:174955..175037Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 174956..175037 -
1690879726.3420649-CDS-C-linearis_contig111:174955..1750371690879726.3420649-CDS-C-linearis_contig111:174955..175037Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 174956..175037 -
1622927482.241112-CDS-C-linearis_contig111:175929..1760881622927482.241112-CDS-C-linearis_contig111:175929..176088Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 175930..176088 -
1690879726.353316-CDS-C-linearis_contig111:175929..1760881690879726.353316-CDS-C-linearis_contig111:175929..176088Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 175930..176088 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig111.1490.1

>prot_C-linearis_contig111.1490.1 ID=prot_C-linearis_contig111.1490.1|Name=mRNA_C-linearis_contig111.1490.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=537bp
MANNHPVGYGERRRGFVRVESQEEAEQRQPQQVVPSPGASEGCFIQCGRR
KFQFNLMVGTILLYMLVSMSLTLLDKWLITGLGFKAPLALICSTYLIMHL
ASLTIRGFIVHQGPVDEAGSGGTKLLVQQLTWHQWAWKVFPVAAASGLEV
GTSTLGLQVMNVGIHTMVRSTVPIFVLLFSVGLGLQEPRCGLLLVVLLVS
GGVALMFSGQGADRQEDLPMEGFLLTLLSGMLAGLKWTLSQVLLQGRGLY
GRGAAAAGEKIHPFTLLHYMSISSAATLVPFVVWLERDALHDMSATFGLE
RMVKTALLIVLVSLLALVLVLTEFTFIKKVSSLSLCIIAVIKELVLVLWS
VGVRGEYLSERTGLGFFVAMIGVTLYKLVPKGPPQLRYEPAPKNAERHIP
SGRGSPSARLSRGGDVESGQKGHRVSSSGQREIISGQTGQEGQDQVPGQR
VPAVPNASRIDLGLDYFPDRHVSGAGVVWEATAAEVSSAVLDRTVEVEPL
GRGMLESGTAVATGRIAAGLPVGYVDVDVERFDIPQ*
back to top

mRNA from alignment at C-linearis_contig111:166478..176133-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig111.1490.1 ID=mRNA_C-linearis_contig111.1490.1|Name=mRNA_C-linearis_contig111.1490.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9656bp|location=Sequence derived from alignment at C-linearis_contig111:166478..176133- (Chordaria linearis ClinC8C monoicous)
CGCCGGCAGAAGCAGACGCCAGCGGCCGCGTGAAGGCATTACAGCATGGC
TAACAACCACCCTGTTGGTTATGGTGAACGACGCCGTGGCTTTGTGCGTG
TAGAGAGCCAGGAAGAAGCAGAGCAGCGGCAGCCACAGCAAGTTGTTCCT
TCTCCTGGTGCTTCGGAGGGATGTTTCATCCAGTGCGGCCGCCGAAAGTT
CCAGGTGTGTGTAAGGTGTGAGGCTTTTGCTGTAGCTGCTGGTGTCAGGG
AGAAAAGCGTGCGTGAGGGTACACTACTGCGAGAAAGAGTGCTCTGCTAT
TGCAGTCTCTCCTTCAGACACGCGACTTCGTGTGTGTTGGAACTTTCAAC
TTTCAACTTTCAAAAGCGAATAAAAAAAAAAATTACCGGCAGCGTAGTCC
AAATTGGGTTCTGAGTAAATAGCATAGTTGGGGACCACGTGATACATGTC
AGCTCGCACCGTCAGCGGGTTTGAGCAGCGCTGCACGCGTACAGGCTAGC
TACAGCGTGGTGGAGTGCGCACTCTAGGCGCATGGCTGTCGGTCGTCTCA
GTTCAGCAGGAAGAGAAAATCTGCGTTTCTATTTTGTCGTTTGTGCCGCT
GCCGATGAAGTTGTGTCCACATCTGCTGCTGCTGTATCTGTCCACCATCG
CTGTGAGAATTTCGGTCAGTACACCGAGGAATCGAGTAACAGGCAGGCGG
CGTGCGAGCAACTAGCGCGGGGAGGCTGATGTGTTTTGGGAGTGTTTCAC
GGACGTCAGCCACGTTGCAATCTCGCTGCTGTCCGCTACGTTTTCCACAC
ACGTTTCCGTCCCCCCCCACCTCCCCACCCCACACACCGAGAATCGCCAC
CGGCACAGCACGTTCCGAATTAGGGTCGACCGAGACTGCGATGAAGGCTT
TTGATGAAGAGAAGGCTCTACTGGTATCAGCATATGTAGCTACGTTTTGT
GGCCGCAGGGGCTTGAAGCTCTACACTCGCGTTCATTCGTTCCGTTTCAT
GTGCGGCTGTGGAAATATTTTTGTACTGAGCATTTTTTCTGCTTTCGGCT
CTGTCGCCCACCACGATTCCGCGGGTTCTGCGCTCACCTCTCACAGTTTA
ACCTCATGGTGGGCACGATCCTGCTGTACATGCTGGTGAGCATGTCTCTC
ACGCTCCTCGACAAGTGGCTCATCACAGGTGAGGATACAGAGCACTGCCG
AGCGCTTTTCATGTGCAATTTACATTCTGGGACTTGGAAATGCTGAACAC
GAGACCGACGTTCACAGCAGACCGCCCCGTCTCCTCCCGTCCTGGACGCT
GACCCCGCTTCGGCGGCTCTGCCGGCCTTGTCCTCGATATCCTGTTGCCT
CTCCACAAAGCGATAGTACCTCCGCATGTTGCGAATTTCTTGGCCTCTTT
CGCCTGCGAGCATTGTCCTGCGGAAACCCTGAAATGAGACAAGCAAAAAC
AAAGTGGCGCGTAAATTTTGCGAACTACGACTGTCCGAATGGTGGGGTTG
GGGGCATTGAGACTCGGGGCATTCAGACGTGTCTCGTGACAGCGCGGGCG
GCCGTAGTGCATGGGAGAATCAGCGACGGTGCTACACAAAAAATTGAGAC
GCGATCAAAATGAGAAAATAACAAGACAGACGACCGTTTGGACCGATGGG
GTCACCTGCATGTGACCCTCTGTCGCCCTCACCACGTCCACCAGCCGCTC
CGATGCGCGCCGTTTTGCTTAAAGAAGCGGTAGGGTAACTTTTCGACGAT
TTCCTCAGGGAGCAGCTGCATGTACCTTCAGATGCAACGGCGCGAAGTGG
ATGGAGCGAGAAGCAAAGAACCGCACGTGAAGGAAAAGCACCAACATCGG
ACGTCTCCCAAACACCCATATCATGGCATCGTCGTGTAAATTGGTTTTGT
CAAAATTGGAAGACTTTGTGAATCGCAGAGCAGCGTACTTGTCGTCCATC
GTCGTGAAGGTCGCGCCATTCGGGCTGTACTTGCGGATGGTGTCCTCATC
CCACCCGTCGTCAGGAACAACCACGTTCTGCTGCTCGGCTGCTCGTTTCG
CGCTCTCCAACCTCGAAGGGCACACCGGGCCCCGACACGAATATCTGCCC
GAAACTGGCATCACTATCCCGGCTATGTCGTGTGCCACTCGTACCTGACA
ACGCAAGAGATGCACAAGATCACATAACAGCAAATCCGAACGAGGAGGGT
ATTAAGAGAAGTCCTACACTTTGCATCAGCGGTCCGAGTCGTACATCTCC
ATTTGTACATGTATACTGAACACGAGACTGACGTTCACAGCAGACTAAAT
CGTACATCTCCATCTAGGAAGGTACTCCTCCTGGACTAGGGAACTACAGC
AGCAGTAACGAAAAAGGTGACTAAACTACAATACAACCATATTTACTACG
GAGTATTTACGTGCGTGTTATAAACCGTAACGGACAACGGGCCGAGACAA
CGGACCGATTGTTGATGATGGAAGACTACTACTACAGAAGGCGTGCGATA
GACCGTAGAGGGCAAAGCCCGAAAAGCGAAAAGAGGAGTGATAACAGAGA
TAGGAGTGATGGGAGGGGGTGATGGCCACCCGTAGAGGAGACACAGGGAG
AGAGAAGGAAGAGGATGACACCGCGGAAAGTCCCAAAATTTCAAATTTTC
CGAAAATTACAGAATGAAGAATAGTCTACTGCGCTCTCACCCGTTACCTG
GAAGCAAGAAGGTGTGCGGAGATACCAACTAGACCACCGGGGCGACCGGC
TCATATATATACCTATGTGTGAAGATAAAATAAAATACCTTATTTTGTCT
TGATTTTATCACTCTGCTGACCCTTAGGGTCCATTTTATTTTTGGCATAC
CTTTTTTAGGGTAAGTTAAGCTGTGACCACGGGAATTGGCCGTGTCTGTT
GGATCAGTACGGACAAAGGGGGGCACTGTGTGGAGAGAAGCGGGATGGTT
TTTATTGTGAAGACAACAACAACAACAACAACAACATTTGGCCAACGATG
TCATCCAACACCCACTAACTCTTGGCTGGAACCCTCTAAAAACGCCATTT
AGCCGTTTAGTCATTCGTACTTGCCGTCGGCACAGATTTCAGATATTATA
GTTGGTACAGCGGTAGTTGTGTTTGTTGGAGCTGTTATGTTATTGCCGTC
GTTGTCGTTTTGTAGGACATTTTCCCGAGTTTTCACACGTATAACTGCTA
TTAAATACTGTAACTATGCTGTTTACTGCTGTGTGTGCATGGTACTGATG
TGTGCTCGGTTCCGTAAATACAAGTCAAAGCACGATCACCCACTCAAAAA
AGATACGCACGCTCCGCGGACGTTCGTGGGCATGCCCCGCGCTAAGCATC
CACCCCCTCTTCGTTTGTCTTCGTTGTCGTTTTTTTCGTCCACCGTCATT
CCCACATACTGCTCCAACCCAATCAATCACATTCCAATCCAAGGTCTAGG
TTTCAAAGCTCCGCTGGCTCTGATTTGTTCGACCTACTTGATCATGCACC
TGGCAAGCCTGACGATACGGGGTTTTATAGTCCACCAGGGGCCGGTGGAT
GAGGCAGGGTCGGGGGGCACGAAGCTTCTCGTGCAGCAGCTCACCTGGCA
CCAGTGGGCTTGGAAGGTGTTTCCTGTGGCGGCTGCGTCGGGGTTGGAGG
TAAGTAAGCCCGCCGTCAGCAGGTTGATAAAGGTTGCACACCCCCCCAAA
ACATACGGTTGTTCCGCCGCACTACATCCAAGTACAAGTACAGCAGTATT
TTCCCCTTCGCTGGTGTTCTCCCTTTCAGCTCTCAGGGTGTTGTCGTGCT
CTTAGTACGAAAGCTCCAGTCCAGTCGTGCGTCTCAAGAGAAGATGGGTC
CGGTGTGGGGCCGATCGTTTCTTCCCCCCGCCTCGTCAGAAAGCTACATC
AGTTTAGTGCAGAAAGCTACGATGAGATGAGTTTCAGGGCACCAGTTGGG
CTATGTTCCGCAGCATCCAGCATCACACAGTTGTCACGATTTGGCAAACA
AGGATGCGTCTCGAGGATATGGCAAGCCAGAGACAGACGATGTGTTATGT
TTTTCTTGGATGTAACACAAAGAGAGAGAGAGCGAGAGGCAGAGAGGGAG
AGCTAAGTAGGGTGACTGACTCCACGGCCGTACGACGTCCTTCGATCCCA
AACGATGGACGCACTCACAAGTAAGTGTATGCCCCAAGTCGTGCCGTCTG
TGGTGTATGGCATGATAATGATATACCACCACAACCTCGCGCTGGTCGTG
TTGCAGTAGTCCTGATGACTCGCCCTGCGTATGCGTGTCTCAGTGATTCC
TCTTACAATACCCTCATCCTCTCTTGCCGTGCTTGGGGTGTGCGCATGTG
CGTGGGCAGGTGGGCACAAGCACCCTTGGCTTGCAAGTGATGAACGTGGG
CATCCACACGATGGTGAGGTCCACGGTGCCGATCTTCGTGCTTCTCTTTT
CCGTCGGCCTGGGTCTGCAGGTGAGCTATCTACACACACCCTCCAAGAGA
CCAATAACTACGTTCCCTCTTCGAACATAAGTATTATATAGTTGCTGGCG
CTTGTGCTAGTGCTGGTGCTGGTAGTGGTTGGCCTTCCTTTGTTTTCCAT
CTGTAGCCGTAGAGCCACGGCCGGTGCAAAAATAAAAACATGTTTCTCTG
TTTTTTCTTGTTGTGTTTTTGTTCTCGGTTCCTTCCAGATGCGCGATCGA
TATCTGTTCGTTCCATGTCTTGTGTTCAGGGTTCCATGCTTTGACGTTTG
ACGGATCATGATTTCCACGTCCAATGGCCGGTGCTCAATTCTCGTGCTCC
GTATTTATTTGTGTGTTTATTTGTGTGTCCTCCGGCAGGAGCCCCGGTGC
GGGCTGCTGCTGGTGGTGCTGCTGGTGAGCGGCGGGGTGGCCTTGATGTT
CTCCGGCCAGGGGGCCGACCGTCAGGAAGATTTGCCCATGGAAGGCTTCC
TGTTAACGCTGCTCAGCGGCATGCTGGCGGGCTTGAAGTGGACCCTTTCC
CAGGTGGGGGGGGGGGGGGGGCGGGGGTAGACTTTTAGGTCATGTCATGA
GGGTTAGGTTTGTGGTGGGGACCCTTTGAAGGGAGGCCTGCCGTTTGTGT
TGAGATATTATTGGTGCATGGTTGTTCGCGTTCATGGCAAGGGTGTCGTC
GTGGCGGCTTTCTCTGCTTGTGCGGCGTCTTGGACCCGTGGTGGCGGAGC
CAGTTGTATTTTTTCGTGTTGTACTGCTGAACGTGGCCGTGATTTAGAAA
CGCTCGTTTTGAACAAGTAGGGTCAAGTTTCCGCAAAATTTCAAGGAGTT
CAGGCAAAGAAGCATAGCTCGATTTGACGGGTTGAAAATTCGATCCGAAA
TGCTTGTTTCTTGATAAGGTAACATGCAAATGTTTTTTCGGAGGGTTCAA
GATGCTGCTATTTAGTCGTCGCACCAACTAAATCGATCGTGCCTGCCAAC
CAAGGTGCTGCTGCAAGGAAGAGGCCTCTATGGGAGGGGGGCAGCAGCCG
CGGGGGAGAAAATCCACCCCTTTACGCTGCTTCACTACATGTGAGCGTCG
TGCTCAGTATTGCAGGACGGGGAGGGGGGTGGCCTGCTGCTCTTTCTCTT
CGTGCCTTCCCGCCAGCACCATCGGCCTCGTCCTCTCGAGCTGTCACCCG
TAGAGGAACCGAACCGAAAACAGCACCTGGTTAAAACCACGTCCCCTGTC
CCGCTTTGCAGTCGGCCTCTCATCGAAGACCCCACATTCGATTGCCAACA
CCTGATGCACGCATGTCGACACCTGGCCTTCTTTATGCGCACTGCTGTAT
CGTATGAAGGTTAAGGTTCAAGCGGGGGGGCTGGGGCATCCTTAACCTTA
ACCCTCTTGTGCGTTGCGTGTGGGCCGTGGTTGTGTTGTGTTGTGTTCCC
TGTCTCCGGTTTCCGGTCTTGTGTCTGTCCGCAGGAGCATCTCGAGCGCT
GCTACCCTGGTTCCGTTTGTGGTGTGGTTGGAGCGGGACGCGTTGCACGA
CATGTCGGCGACCTTCGGCTTGGAACGAATGGTTAAGGTGCGATAAGGTG
CCACGCGGCACTTACGCCGATGATTTCGCTACTACTCCTGGCGGCAGCAG
CGCCGTTATACCTCAAACCACGTAGGCATTGCTACCCTCACATCAGTGGG
TGCGGACCGTGGGCGCCGGTGGTGTCAGCGATCGCACTTTGTTTAGGGCG
TAATCTTGCCTTCACCTTCATGTTCTGGTAGTAAACGCATCGTATGCAAA
GCTCGCGGTGAGCGCGTGCCTGGCGGCGGCGCCTCCACTGCTGTAGTTCA
AAAGCCGGGCCCGACTCGAGCGCGTTTTCAACGTGTGGGATGCTCCAGGC
TACTAAGTTTCACATTTCTGCGACACACGACACCCACCTTACGGTATAAA
GTGCTTCCACCTTACGGTATAAAGTGCTTATAGACAGTGGCTCTTGGCAG
CTGCTTTTCTTTGCGTCTAGTCTACGTAATTTAATGTGTTTTCGTGGCTA
ATTCGATCATCATTTTCATTTGAAACTCATTTTCATTTGATATCATTTTC
GCTGCTACTTGTTTTGACGTTTCGTTGGTATTTCCCGTAGACGGCGCTGT
TGATCGTGCTGGTGTCTCTTCTGGCGCTGGTGCTGGTGCTAACGGAGTTC
ACTTTCATCAAGAAGGTCTCCTCGCTAAGCCTGTGCATCATCGCCGTCAT
CAAGGTCAGTCACACCACATCACACCACATAGATGAGTTGTTTTGCCGAG
GGCCGCCGCTGTATTTTGCCTCTTTTTGTCTTACCTCTTCGGTGTTCTTG
CAAACCTCGACCATGGGATGGGCACTGCTGTGCTGTTGTGGTGTTTCCAT
GATATATGGTGGTACTATTTTTGGGAGTTTTGGAGATGGAAAGATCAACT
TCGAATGGTTATACTACGTACCTGCTTTCTCTTGGTTGCTCGTTATTGTA
GCCTCTCAGTCTCACGAGGGGGTGCGCCGCACTACGGGAGAGGGGCGTAT
GGACCTTCTAGATCGTTGTAGATCGTTGTAGTCGGGCGAAGCAAGCCATG
TTGACATCGACAACGACAGACAGTGAATTTTTCCAAAGCCAGCGAAGGCA
ATTTCGACGCTGACGTGGTGAGAGAAACATCCAACTTTTGCTCGGGAGGT
GTCTACTACGCCCGCCTATGCCTGTAGCGGCCGCATCTTTGGTGGGCGCG
ATAACATAGGCTTCTTGATCCCTCATGATGCTGCTACAAAGCAACGCCAA
TGACAACCAGCTCATCGTTCAACCCCCCCCCCCGCGTCCTTCTCACTTTT
TCTCACTTCGCCTCACCTCACCGCACCTCACCTCACCTCACCTCATTGCT
GCTGTTTCCTCCCCCCCCGCTATGTACCCCCATGCCTGCCGAATAGGAGT
TGGTCCTGGTGCTGTGGTCGGTCGGGGTGAGGGGAGAATACCTCAGCGAA
CGCACGGGGCTCGGTTTCTTCGTCGCCATGATAGGAGTCACCCTCTACAA
ACTCGTCCCCAAGGGGCCGCCACAACGTAAGAGTACAGGAGGAGGTGGCA
TTCCTACTCTTTCGGGAGAAGGTGCTTCACAGCTGGGCCGTTTTGCTTTT
AGAAAGCCTAACCTCTACGGAAGTGCCATATACGTCGTACTGCTGTATGT
ATGACATCTCGCAACTGATGCAATAAAAAAAGTGGCTTGAAGATGAAGAT
TTCCGAGCCTCCCTTTCTGTTATTATTCAGGTGCGGCTTGTCGACCGGTT
TGTTAGCCTCTAGCCTCGTGTGCATGCGATGTGGTTTTAGTCCCCAGGGG
TTCGGCGTTGCAGTGAAAACCTCCCTGCATTGCCGTGCTGGCCCCAGCAC
GAATCCCCGTTGAGCCATACCAGTACCATATACGTGTGTTTTATGTTTTG
TTTCTTCTCCGAATCCTGCAGGAGCTATTGTGTTGTTGCTTTCGCAGCAA
GAAGCAGCAGTTCACTTGCTGGCAACATCAGCCGAGCCCCAACCCTCAGC
ACGATGCCCATCTTTCACCGTCTGTGCCGTACGTTGCTATCTATCCTCAT
CTCCAGTACGCTACGAACCAGCGCCGAAAAACGCGGAGCGACATATACCC
TCGGGGAGAGGGTCCCCGTCGGCACGGTTATCCCGGGGGGGGGACGTGGA
AAGCGGCCAGAAAGGGCACCGAGTCAGCAGCAGCGGCCAAAGAGAAATAA
TAAGTGGCCAAACCGGGCAGGAGGGTCAAGATCAAGTACCAGGTCAGCGG
GTACCAGCGGTACCGAATGCCTCAAGGATAGACTTGGGCTTGGATTATTT
TCCCGACAGACATGTCAGCGGCGCAGGGGTAGTGTGGGAGGCGACCGCTG
CGGAAGTAAGCTCTGCCGTCCTGGACCGCACGGTAGAGGTTGAGCCTTTG
GGGAGGGGGATGCTGGAGAGCGGCACTGCCGTTGCTACGGGGAGGATCGC
GGCTGGTTTACCCGTCGGGTATGTTGATGTTGATGTTGAAAGATTTGACA
TCCCGCAGTGATGGGTGACCTTGCTTGGGAGGTTGTGTTGTCATTCTTAG
ACAGATGCCCTTGGGGGACATCGCTGTTTAAGACGGCTGTTGGGATCGGG
GTAGGACCGCGTCTTGTCTTGTCTTGTCTTGTCTTGACTGCCCGATCATC
TATCAATCTTGCGTATTTATTGTTTAAAGGAAGTGTTTTAAGCTCACTTG
TCGGCTTGTTGTTTTCTGGCCACGTTGTCGAAGATTTGGCCTCACAGGCC
GTCTTGCTTCGTTCTCACCAGCAGTGTTTTCGCGAGAGTTGGCACGGACG
TCGGAGTATCAGGCCCAGCGAAGGTTAGGGAGGCTGTTGCGGCTCCTGGC
GCGGATGGTGGATACTTTCAGCAAGACGGAAGAACTTGGCAGTATCAGCC
GCTTCAAGCTTCGAAGCCGCCGGGACTTCCCGCGGAACCGCGCACCTTGT
ACCATAATTCGCGTGTATTTTATATCTGTCATTTTGCCATTTGTTAAGGC
TACGAAAGTACTACATTATTTGTTGTCCTGCCCATCCGGGGGATCGATCC
CCGCTGTTTCCTGTGACACTATTTAAGGAATGACGCCGATAGGAATAGGG
AGACATTTCCCCAGGCCAATTCATCGTTTTAAAGAGTTCGCTTTCATGCC
ATGTCTTGGTAGCGTCGAAGCACACCAACACCTGGTTGAGAGAGTCACGT
TATGCCGCGCAGCGATTGGCGGTGTGTTTGTGCCCTCGCACTTATCAGGG
ACTGAACTGCTGAGGACAGTGAGAGCCGACCAAGTTCGAGCAGGGCCATC
GTGGCCGCTAGGGCTGACTGAAAAAACGCACTCTTGAATGAAGAAAAAGC
GTTTGGAATAGAAATCAGCGCAAAGGGGTTTCATGCATGCTTCGGTGGTT
CCGTTGGTACAGCAGTAGTAGTACGCTACGTCGAAAAATTCCGGCGGCTA
CTGTGGCTAGGTTGTGCGATCGATCGTGTCCCGGTAATGAGTTTTTCGCA
CCTAGCGGGTGCGGGGCGTTATTGTATGTCTTATTTTATGTACCAGTATC
TATCGCGCGTACACAAACAGACGTCGACTTCAATGTTATTATTTAATAGC
GATTGAAATGAACGATTGAACCCCTTCAAAAGTCGGGGAGAAATAAAGAA
ATGAAT
back to top

Coding sequence (CDS) from alignment at C-linearis_contig111:166478..176133-

>mRNA_C-linearis_contig111.1490.1 ID=mRNA_C-linearis_contig111.1490.1|Name=mRNA_C-linearis_contig111.1490.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3222bp|location=Sequence derived from alignment at C-linearis_contig111:166478..176133- (Chordaria linearis ClinC8C monoicous)
ATGGCTAACAACCACCCTGTTGGTTATGGTGAACGACGCCGTGGCTTTGT
GCGTGTAGAGAGCCAGGAAGAAGCAGAGCAGCGGCAGCCACAGCAAGTTG
TTCCTTCTCCTGGTGCTTCGGAGGGATGTTTCATCCAGTGCGGCCGCCGA
AAGTTCCAGATGGCTAACAACCACCCTGTTGGTTATGGTGAACGACGCCG
TGGCTTTGTGCGTGTAGAGAGCCAGGAAGAAGCAGAGCAGCGGCAGCCAC
AGCAAGTTGTTCCTTCTCCTGGTGCTTCGGAGGGATGTTTCATCCAGTGC
GGCCGCCGAAAGTTCCAGTTTAACCTCATGGTGGGCACGATCCTGCTGTA
CATGCTGGTGAGCATGTCTCTCACGCTCCTCGACAAGTGGCTCATCACAG
TTTAACCTCATGGTGGGCACGATCCTGCTGTACATGCTGGTGAGCATGTC
TCTCACGCTCCTCGACAAGTGGCTCATCACAGGTCTAGGTTTCAAAGCTC
CGCTGGCTCTGATTTGTTCGACCTACTTGATCATGCACCTGGCAAGCCTG
ACGATACGGGGTTTTATAGTCCACCAGGGGCCGGTGGATGAGGCAGGGTC
GGGGGGCACGAAGCTTCTCGTGCAGCAGCTCACCTGGCACCAGTGGGCTT
GGAAGGTGTTTCCTGTGGCGGCTGCGTCGGGGTTGGAGGTCTAGGTTTCA
AAGCTCCGCTGGCTCTGATTTGTTCGACCTACTTGATCATGCACCTGGCA
AGCCTGACGATACGGGGTTTTATAGTCCACCAGGGGCCGGTGGATGAGGC
AGGGTCGGGGGGCACGAAGCTTCTCGTGCAGCAGCTCACCTGGCACCAGT
GGGCTTGGAAGGTGTTTCCTGTGGCGGCTGCGTCGGGGTTGGAGGTGGGC
ACAAGCACCCTTGGCTTGCAAGTGATGAACGTGGGCATCCACACGATGGT
GAGGTCCACGGTGCCGATCTTCGTGCTTCTCTTTTCCGTCGGCCTGGGTC
TGCAGGTGGGCACAAGCACCCTTGGCTTGCAAGTGATGAACGTGGGCATC
CACACGATGGTGAGGTCCACGGTGCCGATCTTCGTGCTTCTCTTTTCCGT
CGGCCTGGGTCTGCAGGAGCCCCGGTGCGGGCTGCTGCTGGTGGTGCTGC
TGGTGAGCGGCGGGGTGGCCTTGATGTTCTCCGGCCAGGGGGCCGACCGT
CAGGAAGATTTGCCCATGGAAGGCTTCCTGTTAACGCTGCTCAGCGGCAT
GCTGGCGGGCTTGAAGTGGACCCTTTCCCAGGAGCCCCGGTGCGGGCTGC
TGCTGGTGGTGCTGCTGGTGAGCGGCGGGGTGGCCTTGATGTTCTCCGGC
CAGGGGGCCGACCGTCAGGAAGATTTGCCCATGGAAGGCTTCCTGTTAAC
GCTGCTCAGCGGCATGCTGGCGGGCTTGAAGTGGACCCTTTCCCAGGTGC
TGCTGCAAGGAAGAGGCCTCTATGGGAGGGGGGCAGCAGCCGCGGGGGAG
AAAATCCACCCCTTTACGCTGCTTCACTACATGTGCTGCTGCAAGGAAGA
GGCCTCTATGGGAGGGGGGCAGCAGCCGCGGGGGAGAAAATCCACCCCTT
TACGCTGCTTCACTACATGAGCATCTCGAGCGCTGCTACCCTGGTTCCGT
TTGTGGTGTGGTTGGAGCGGGACGCGTTGCACGACATGTCGGCGACCTTC
GGCTTGGAACGAATGGTTAAGGAGCATCTCGAGCGCTGCTACCCTGGTTC
CGTTTGTGGTGTGGTTGGAGCGGGACGCGTTGCACGACATGTCGGCGACC
TTCGGCTTGGAACGAATGGTTAAGACGGCGCTGTTGATCGTGCTGGTGTC
TCTTCTGGCGCTGGTGCTGGTGCTAACGGAGTTCACTTTCATCAAGAAGG
TCTCCTCGCTAAGCCTGTGCATCATCGCCGTCATCAAGACGGCGCTGTTG
ATCGTGCTGGTGTCTCTTCTGGCGCTGGTGCTGGTGCTAACGGAGTTCAC
TTTCATCAAGAAGGTCTCCTCGCTAAGCCTGTGCATCATCGCCGTCATCA
AGGAGTTGGTCCTGGTGCTGTGGTCGGTCGGGGTGAGGGGAGAATACCTC
AGCGAACGCACGGGGCTCGGTTTCTTCGTCGCCATGATAGGAGTCACCCT
CTACAAACTCGTCCCCAAGGGGCCGCCACAACGAGTTGGTCCTGGTGCTG
TGGTCGGTCGGGGTGAGGGGAGAATACCTCAGCGAACGCACGGGGCTCGG
TTTCTTCGTCGCCATGATAGGAGTCACCCTCTACAAACTCGTCCCCAAGG
GGCCGCCACAACTACGCTACGAACCAGCGCCGAAAAACGCGGAGCGACAT
ATACCCTCGGGGAGAGGGTCCCCGTCGGCACGGTTATCCCGGGGGGGGGA
CGTGGAAAGCGGCCAGAAAGGGCACCGAGTCAGCAGCAGCGGCCAAAGAG
AAATAATAAGTGGCCAAACCGGGCAGGAGGGTCAAGATCAAGTACCAGGT
CAGCGGGTACCAGCGGTACCGAATGCCTCAAGGATAGACTTGGGCTTGGA
TTATTTTCCCGACAGACATGTCAGCGGCGCAGGGGTAGTGTGGGAGGCGA
CCGCTGCGGAAGTAAGCTCTGCCGTCCTGGACCGCACGGTAGAGGTTGAG
CCTTTGGGGAGGGGGATGCTGGAGAGCGGCACTGCCGTTGCTACGGGGAG
GATCGCGGCTGGTTTACCCGTCGGGTATGTTGATGTTGATGTTGAAAGAT
TTGACATCCCGCAGTGATACGCTACGAACCAGCGCCGAAAAACGCGGAGC
GACATATACCCTCGGGGAGAGGGTCCCCGTCGGCACGGTTATCCCGGGGG
GGGGACGTGGAAAGCGGCCAGAAAGGGCACCGAGTCAGCAGCAGCGGCCA
AAGAGAAATAATAAGTGGCCAAACCGGGCAGGAGGGTCAAGATCAAGTAC
CAGGTCAGCGGGTACCAGCGGTACCGAATGCCTCAAGGATAGACTTGGGC
TTGGATTATTTTCCCGACAGACATGTCAGCGGCGCAGGGGTAGTGTGGGA
GGCGACCGCTGCGGAAGTAAGCTCTGCCGTCCTGGACCGCACGGTAGAGG
TTGAGCCTTTGGGGAGGGGGATGCTGGAGAGCGGCACTGCCGTTGCTACG
GGGAGGATCGCGGCTGGTTTACCCGTCGGGTATGTTGATGTTGATGTTGA
AAGATTTGACATCCCGCAGTGA
back to top