mRNA_C-linearis_contig110.1431.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig110.1431.1 vs. uniprot
Match: D7G0V4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V4_ECTSI) HSP 1 Score: 1257 bits (3253), Expect = 0.000e+0 Identity = 1064/2524 (42.16%), Postives = 1249/2524 (49.48%), Query Frame = 1
Query: 706 RTSATPAPQLHGSNHGADDARACIASTVPSAIDCFSRRNLRGPAEDVLAECAAQK-LPDAPSILVDQLVHHGMEHDDRFIRLWSTRVSSRLLVRG-MSLEQREYGSLLKGLVGRVRDVDDGVVDAAVDVLGQMYHAGPDTFRMGEECLDPVHRQLLQHYASRIKYQRNNGGVITDESDENRAHGYERGVDGGAGDAMNGRAAERGAVAAVVADGKRTPETEIQTATEIEVDAHAEADQAAVDHSWFSSPPGSQHGEEIEVVQSSAVVSPKSSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDEDGPNFESIVEGVTISVSATGSGETPGACATKLRSGSXXXXXXXXXLEVAASVNAAPKAASALLAQAPKEETGRRKGSAVIEDPKEIRKLILGSSSSTSTDSSSNLDGHDNCTFGTGHRRQGEDRQALHHGTCSLPRPVLAGSAATEVVAILGDERGVGFCAAAARKNLVAARKARASVRHESGQTV--SDGG---------------AGMPPSSMATSRTA--------PXXXXXXXXXXXXXVVTVRGKQAPATETVKPIPTTSEIYXXVSPSRKGRSPQRGDDTPTTAASVPGT-----------------------QPPERLVSDADTSPPLPPLALGGLLSTLAEVDAGG-GRGGATKGARDDTSSRFPRTKPSVSFVGGAAGDWSASGTAGARRQGRIRAMEDAKRLAFDMTLNTRADGRERQGQRAGGASGAESANELS-------------SSRLGEIIVVVLRLTDDADFKIALLALQTMQALVATTGKHLEPHLAVILQTLVPRLGDHKVAARHHAMVVLCALVRVARFPSAAP--LLAQHGLRSPAWRTREGTLRLVIAGLLSWQPTS-----------SAG------------------------CETGSDAGVRRKGNVSG-------------------ERQPALSKKGSGIGGRGRGGAVAAATAMGAEEILRDVGLLLKDERPEVRFASVEALAVAANVWSGEGLDVSHLLEHAKLLSSNESRRRVAARLQDPPSSLSRLGPDETVELGSGLTPWRASPDHATARRRRTAAGQEVGKRNANQRLAGDEDDEGSFVEGAGGGAGGSGVRGGKSALRCWRNNEAGEREEVDPWEYHHGGGVGEPNATSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPGRVGSGSRAVLDDEGRSSGYAAQESRRTATWVASDSKAGIDLALASSPYSEGGSGGGRKGSGATPRRRVSSPNLTSSGSSGHKGSCGVGSEGGRRGXXXDGEGGENHTYTPSWAERNRRGTQHNGLAPGASRAFYQGHRR-----------------ADTEDTMRSPEAAAGRRGGPPRSPGEERLWDTR-----------------------------------------DDSEDEADLGGPWGGIERRRRGPAGCTKRGSAGRDERENGRLGGVEKGGLCCPAVPDPDLLLTLKRGGSRNSKASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RSRSRPRGGPPAEPTTPVPVGRYDGMGRRSHMETTVQQPLPLSLNKRTGXXXXXXXXXXTERWGDGKARGAETFVTGIDAGSENGSSGGQWDPSLASTT-----PDGGHRQGLHKQVFSSATTKRGRERREADGKDFE-VRPLASYRRKDGTG---GEPASGSNRRGGRRGLTGEGSGAEGGGSEFGSRRQQGGVSPPPASGGRAGRAMVFPPSPNSSLSKPDSFDYLTAEDIRPCPNPSQELQRTMASLPRDNWPEIFHTLNSVRRLAMHHAALLGSQSHLHALVRDVLAQSENLRSQVAKNALLALADLWRGLGDTLDPELPMVCPGLVKKLADKVEFLAEAARECVDEVVATATESRALSAFLACGSHRSPALRAKAALAILLCVRQRCYYCSA----DPSSSRVFSQRG--RGDR--GAGGRAGGVC-VGAREVDRLLSALPRFLQQ----------DGNQETRHHAKAIVAVLIDTGEVDEVRLRREIPPPILERLQRELLNSSLPSGPGFTAPNA----ATPSSWCSSYGS------RXXXXXXXXXXXRLGATGP--------------ALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRW-AAAGGECWRGGEEREGHRSDRRARSDIRSERYDDGGVGDE----LGPGLLSSPPHRAPPPLSRSRRWADESGVDSSTDTDD------------RYRPERRAEAGSNDGSQHATRPKRQGLPAAARAANKTPPRRDSRGGSVKR--------------RSNKVFHSREAELLPAVYARLDSGDWRERLKGLEEATVLLEEHGSGLHAAGKSARLLDRMAELLSDGNLKVNLLALEGVVRLGPSLGSKLESVVNTLVPAVCKNLASSNQQRIALAEEALDALCEAIDPCLIVQPVSSLAQYGNARLKVPMLTLLRNITPEVGEVKPILLTKYV 7491
+ +A APQ S HG+ A AC+ASTVP IDCFSR LR PAEDVLA+ A ++ LPD SILV +LVHHGMEHD+ IRLWST SRL+ RG M LE+REYGSLLKGLVGR+RDVD+ VVDAA L +MY AGP T + GG T NG A G A P I TA N ES T+ S + S P + S+N + TG +++++ + L + S S ++ L H H + AL S RPVLA AATEV LG E G CAA A L AR R+ +G V + GG A PPS S + P R PAT + P T S +SP R G S + +P TA + P + ++S D+SP L LL TL EV+A GRG T G+ SR P KP F G AA DW+ASGT+G RR+ R+RAME AK +A T+ AGG GA +E + + + +I+VV+LRLTDD DFKIALL+LQT+ V +H++ HL +++ L+ +LGDHKVAARHHAM+VL A+VRV+ SA P LLA+ GL S WR RE +LVIAGLL WQPTS SAG E +G RR G G + PA+ +G+ GR R G A + E+++RDVG LL DERPEVR A+VEALAVAA++W +DV +LE A+L SNESRRRVAARL D SSL +GPD V G+GLT SP HA R R A E+ + + L +G V G +GG +RGG SALRCW +NEAGEREEV PW+ H G + + G G+RA + EGR G AQ RRT + + G + A SP + GG GG + PRRRVSSP L G+ GR GG +HTY PSWA++ T PG +R++ H+ D+ED R E+ G GG + R D SE+E GG W I R R + G E G P V DPDLL TLKRGGSRN+KASR XXXXXXXXX RSRSRP+GG PAEPTTPVPVGRYD MGRRSHMETTVQQPLPLSL KR G + R G G G ETFVTGID ++G SG LA + P+G R+G + Q S+ T+R RERREA ++ E R L + D TG G A+ +R G +TG G G G RR + P P GG GRA V PPSP+++L+KPDSFDYLTAEDIRP PNPSQELQR MASLPRD WPEIFHTLNSVRRLA HH LLGSQSHLHALVRDVL QSENLRSQVAKNALL LADLWRGLGDTLDPELPMVCP LVKK+ADKV+FLAEAARECVDEVVATATESRALSAFLACGSHRSPA+RAK+ALA+LLCVR+RC + ++ P S S+R R D+ G GG AG +GARE+DRLLSALPRFLQ+ DGNQETRHHAKA+V VL++TGEV E RLRREIPPPILERLQRELLNSSLPSGPGFTA N+ ATP S SS+ S RLGATGP + S XXXXXXXXXXXXXXX +RW AAA GE WR E EG AR ++ + DD G G + LG G LSSPPHRA P + RSR WA + DT RY P + AG + T P ARA + + P +GG +R KVFH REAELLP VYARLDSGDWRERLKGLEEAT LLEEHG+ LHAAGKSARL+DR+A+LLSDGNLKVNLLALEGVVRLG S+GSKLE VVNTLVPAVCKNLASSNQQR+ALAEEALDALCEA+DPCL VQPV+SLAQYGNARLKVPML LR ITPEVG+VKPILLT +
Sbjct: 22 KITAAMAPQPSASGHGSHAATACVASTVPVVIDCFSRDRLRAPAEDVLAKFAVEEQLPDVRSILVHKLVHHGMEHDEASIRLWSTLAPSRLMARGLMVLEKREYGSLLKGLVGRMRDVDEDVVDAAAGALRKMYSAGPTT--------------------------ESPGGTST-----------------------NGAAKTIGLEPAA-------PSASISTARR-----------------------------------------------------------------------------------------------------------SNKESST---TLGSSGSSSRLVPSSNG---------------------SLNTSTN-------------TGEATEKSILKNSISVDSLDIDGRGSRSRGKTAQLHDH--------HAQHERKHPAL---VASPTRPVLADPAATEVPVTLGGEEEFGSCAAFAEPKLGKARTGRSGGEDGTGAAVLGTSGGRDRERGDRNDGEATAAVQPPSRPDASPMSKAGATIPHPPDAGRSEAKEKHSATAERKASVPATVST-PTKTCS-----LSPPRPGES--TANLSPKTAMAGPSATAEQCHRHSSAAKTYSATTTVRANDEDNVMSTVDSSP-----ILRELLRTLVEVEAAAAGRGAKTGGS----GSRSPVDKPPAKFEGVAAVDWTASGTSGVRRRNRVRAMETAKTMASKETMLA-----------AGGDGGAMQDSESTRTPTLPPXPFSPPTGMMEDILVVMLRLTDDPDFKIALLSLQTIHGFVLAVREHIQTHLDLLIPPLIVKLGDHKVAARHHAMLVLSAVVRVSGLASATPRLLLAREGLLSAGWRARESVAKLVIAGLLFWQPTSPSSVDPDALGLSAGRGVAGEKLGRGRGAFMGGNGGERLTEDEHQSGARRPGRGEGGSAGXXXXDDSKRRHLHSPSQSPAMPLRGAHGCGRRRNGDAALMSTADKEQLVRDVGSLLADERPEVRRAAVEALAVAASMWGANDIDVLRVLERAELFRSNESRRRVAARLHDSTSSLPSVGPDGIVNFGAGLT-THLSPAHAR-RERPVMAAVELSTSSEQEALESRCGHDGRDVNGNDHHSGG--IRGGTSALRCWTSNEAGEREEVTPWKPHQGVSDSDRGGRGKELSDVGSGGQSQGQGME------------NNGGGARGGNRAGREGEGRHRGREAQSYRRTRIASDEEERGGTESDPALSPNNRGGRGGA-----SGPRRRVSSPVL--------------GTNRGRTDGGKRQGGGGDHTYIPSWADK----TGDEPQVPGENRSYDAQHKPDRIGRGQPSIRKPSPSGVDSEDD-REAESTRGEVGGAGSGRHAQHGTHERRRXXXXXGPEXGSSXXXXSPEXXXXXXXXXXXXXXXPREGTDGSEEELWKGGQWDNIPRMGRTIDVGRRTGGXXXXXXXXXXXERDECSGRR-PVVVDPDLLSTLKRGGSRNAKASRRAVSXXXXXXXXXEALESGAGRRASGGGPASLSHDGGEGRSRSRPKGGEPAEPTTPVPVGRYDDMGRRSHMETTVQQPLPLSLRKRAGGV--------SGRRGSGGGLGTETFVTGIDVDIQDGGSGSSRHGELAESPLGGPEPEGERRRGFYNQTGVSSATRRRRERREAGERNAENERKLRAGVECDATGRNDGRHAT-EDRPAGEGSITG--GDGRGRGKRGGQRRVRLSSPPTPPLGG--GRATVVPPSPSAALNKPDSFDYLTAEDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHTPLLGSQSHLHALVRDVLGQSENLRSQVAKNALLTLADLWRGLGDTLDPELPMVCPILVKKMADKVDFLAEAARECVDEVVATATESRALSAFLACGSHRSPAVRAKSALAVLLCVRRRCCHPTSRTAPSPLSGAASSRRSGVRIDKRNGGGGGAGHAGRMGAREMDRLLSALPRFLQRGIVLRGSVSMDGNQETRHHAKAVVTVLMNTGEVGEARLRREIPPPILERLQRELLNSSLPSGPGFTATNSDAASATPYSAGSSFSSPSYLNRSGRNDVGARISRRLGATGPVPSSSGPGVSSPASSFSPTAGRRGGSGGVGDGNRDLRRXXXXXXXXXXXXXXXGEERWVAAAPGESWR--REHEG------ARGEL-GDSDDDDGCGSDFAGGLGMGSLSSPPHRASPSVPRSRNWAGRYPAEGHADTAREEQRQRQQDAAARYHPRLQRGAGDPNDKTTTTTP--------ARATSISSP---GKGGIGERGXXXXXXXXXXXXSSKAKVFHCREAELLPEVYARLDSGDWRERLKGLEEATSLLEEHGNNLHAAGKSARLVDRVADLLSDGNLKVNLLALEGVVRLGASMGSKLEPVVNTLVPAVCKNLASSNQQRVALAEEALDALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLREITPEVGDVKPILLTNSI 2232
BLAST of mRNA_C-linearis_contig110.1431.1 vs. uniprot
Match: A0A6H5L523_9PHAE (CLASP_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L523_9PHAE) HSP 1 Score: 728 bits (1879), Expect = 2.570e-219 Identity = 756/1954 (38.69%), Postives = 909/1954 (46.52%), Query Frame = 1
Query: 1687 GDEDG-----PNFESIVEGVTISVSATGSGETPGACATKLRSGSXXXXXXXXXLEVA--------------------ASVNAAPKAASALLAQAPKEETGRRKGSAVIEDPKEIRKLILGSSSSTSTDSSSNLDGHDNCTFGTGHRRQGEDRQALHHGTCSLP-RPVLAGSAATEVVAILGDERGVGFCAAAARKNLVAARKARASVRHESGQTV--------------SDGGA----------------------------GMPPSSMATSRTAPXXXXXXXXXXXXXVVTVRGKQAPATETVKPIPTTSEIYXXVSPSRKGRSPQRGDDTPTTAASVPGTQPPERLVSDADTSPPLPPLALGGLLSTLAEVDAGGGRGGATKGARDDTSSRFPRTKPSVSFVGGAAGDWSASGTAGARRQGRIRAMEDAKRLAFDMTLNTRADGRERQGQRAGGASGAESANELS---------SSRLGEIIVVVLRLTDDADFKIALLALQTMQALVATTGKHLEPHLAVILQTLVPRLGDHKVAARHHAMVVLCALVRVARFPSAAP--LLAQHGLRSPAWRTREGTLRLVIAGLLSWQPTSSAGCETGSDA-------------------------------------GVRRKGNVSG-------------------ERQPALSKKGSGIGGRGRGGAVAAATAMGAEEILRDVGLLLKDERPEVRFASVEALAVAANVWSGEGLDVSHLLEHAKLLSSNESRRRVAARLQDPPSSLSRLGPDETVELGSGLTPWRASPDHATARRRRTAAGQ---EVGKRNANQRLAGDEDDEGSFVEGAGGGAGGSGVRGGKSALRCWRNNEAGEREEVDPWEYHHGGGVGEPNATSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPGRVGSGSRAVLDDEGRSSGYAAQESRRTATWVASDSKAGIDLALASSPYSEGGSGGGRKGSGATPRRRVSSPNLTSSGSSGHKGSCGVGSEGGRRGXXXDGE----GGENHTYTPSWAERNRRGTQHNGLAPGASRAFYQGHRRADTEDTMRSPEAAAGRRGGPPRSPGEERLWDTRDDSEDEADLG---GPWGGI-----------ERRRRGPAGCT------------------------KRGSAGRDER-------ENGRLGG--VEKGGLCC---------------------PAVPDPDLLLTLKRGGSRNSKASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RSRSRPRGGPPAEPTTPVPVGRYDGMGRRSHMETTVQQPLPLSLNKRTGXXXXXXXXXXTERWGDGKARGAETFVTGIDAGSENGSSGGQWDPSLASTT-----PDGGHRQGLHKQVFSSATTKRGRERREADGKDFEVRPLASYRRKDGTGGEPASGSNRRGGRRGLTGEGSGAEGGGSEFGSRRQQGGVSPPPASGGRAGRAMVFPPSPNSSLSKPDSFDYLTAEDIRPCPNPSQELQRTMASLPRDNWPEIFHTLNSVRRLAMHHAALLGSQSHLHALVRDVLAQSENLRSQVAKNALLALADLWRGLGDTLDPELPMVCPGLVKKLADKVEFLAEAARECVDEVVATATESRALSAFLACGSHRSPALRAKAALAILLCVRQRCYYC-----SADPSSSRVFSQRGRGDR-----GAGGRAGGV-CVGAREVDRLLSALPRFLQQDGNQETRHHAKAIVAVLIDTGEVDEVRLRREIPPPILERLQRELLNSSLPSGPGFTAPNA----ATPSSWCSSYGSRXXXXXXXXXXX------RLGATGP--------------ALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRW-AAAGGECWRGGEEREGHRSDRRARSDIRSERYDDGGVGDE----LGPGLLSSPPHRAPPPLSRSRRWA 6780
G EDG P FE IV+GVT++ A E+PG +T SG+ A +S P + +L ET + +++++ + L + S S S+ ++ L H H R+ H G S P RPVLAG AATEV LG E G CAAAA L A R+ +G +DG A G P + S TA P T P S I ++ +R+G T +T +V + + D+SP L L L TL EV+A GA G SS T P F G AA DW+ASGT+G +R+ R+RAME A + T+ G+ G ++S + + + +I+VV+LRLTDD DFKIALLALQTM V +H++PHL +I+ L+ +LG HKVA RHHAM+VL A+VRV+ S P LLA+ GL S WR EG +LVIAGLL W+P+S + GSDA G RR G G R PA+ G+ GR G A + + E+++RDVG LL DERPEVR A+VEALAVAAN+W +DV +LE A LL S ESRR VAARL DP SSL +GPD V G+GLT R SP HA R AA + + + + R D D + +GG +RGG ALRCWR+NEAGEREEV PW G + +R GR G G A E R T G D L SP + GG GG + PRRRVSSP L G+ GR DGE GG +HTY PSWA+R T PG +R+++ P+ RG P R T DD E E G G GG ERR RGP G + + G+ G D+ +N R G ++ G P V DPDLL TLKRGGSRN+KA+R XXXXXXXXXXXXXXXXXXXXXXX X +SRSR +GG PAEPTTPVPVGR GM + + +P L + KR GID ++G SG LA + P+G R+G H Q S R +A G++ + R +G+ G R G+RG+ RR + +S PP RA V PPSP+++L KPDSFDYLTAEDIRP PNPSQE+QR MASLPRD WPEIFHTLNSVRRLA HH+ LLGSQSHLHALVRDVL QSENLRSQVAKNALL LADLWRGLGDTLDPELPMVCP LVKK+ADKVEFLAEAARECVDEVVATATESRALSAFL CGSHRSPA+RAK+ALA+LLCVR+R YC +A S S R G R G GG AG +GARE+DRLLSALPRFLQ GEVDE RLRREIPPPILERLQRELLN SLPSGPGFTAPN+ ATP S SS+ S RLGATGP + S XXXXXXXXXXXXXX +RW AAA GE WR E+EG AR ++ + DD G G + LG G LS+PPHRA P + RSR WA
Sbjct: 175 GTEDGEGLQRPTFEPIVDGVTVASWADRDRESPGGTST---SGAAKTIGLQPAAPPAXXXXXXXXXXXXXXXXXXXGSSSRLVPSSHGSLNTSTNTRETTEK---SILKNSISVDSLDVDDSGSRSSGKTAQLHNHH-----AQHERK-------HSGLVSSPTRPVLAGPAATEVSVTLGGEEEFGCCAAAAEPKLGKAGMERSGGEDGTGAVALGAGGGCDRERGDRNDGEATAAVKPPPRPDSSPLSKAGAAIQHPPDSGRPEAKEKHSATAEREAFVSATLSTPTKTCSLSPPRPGKSTANLSPK-SAIAGPLATARQGHRHSSAAKTYSTTTTVRANDE-DNAMGAVDSSPILVEL-----LRTLVEVEAAAAGRGAKAGGSGSRSS--VHTSP-AKFEGVAAVDWTASGTSGVQRRNRVRAMETAITMTSKETMLA-------AGRDGGAMQDSDSTRTPTLPPPPFSPPTGMVEDILVVMLRLTDDPDFKIALLALQTMHGFVLVVREHIKPHLDLIIPPLIVKLGHHKVATRHHAMLVLSAVVRVSGLASDTPRLLLAREGLLSAGWRASEGVAKLVIAGLLCWKPSSPS--SVGSDALGVSAGRGVNGERLGHGRGTFMGGNGGEGLTEDKHQSGGRRPGRGEGGSAGSGNSKDSKRRHLHSPSRSPAMPPSGAHGYGRRENGGAAMMSTLDKEQLVRDVGSLLADERPEVRRAAVEALAVAANMWGTNDIDVFRVLERADLLRSTESRRLVAARLHDPTSSLPSIGPDGIVNFGAGLT-TRLSPAHARRGRPVVAAAELSTSLEQEASESRCGNDGRDVNGYDHHSGG------IRGGTFALRCWRSNEAGEREEVAPWRPLQGVSGSDRRGRGKEVRNVGSGGQGQNQGMEDNGGEARGG---NRVGREGXXXXXXXXXXGYQRTRTASEEERGGT--------GSDPDL--SPNNRGGRGGA-----SGPRRRVSSPVL--------------GTNSGRT----DGEKWQGGGGDHTYIPSWADR----TGDEPQVPGENRSYH----------AENMPDRIG--RGQPSRWKPSPSGLHTEDDREAERTRGRVDGAGGGRHAQHGTRERRRERRGRGPEGGSSGPGAKPEWQHQNHNRGHRRRGSPREGTDGSDQELWKGGQWDNSRGMGHTIDVGRXXXXXXXXXXXXXXXXRDQYSGRRPVVVDPDLLSTLKRGGSRNAKANRRAVSAXXXXXXXXXXXXXXXXXXXXXXXPASLSHDGGXXQSRSRSKGGAPAEPTTPVPVGR--GM----QLLDNLFKP-SLVVRKRQAALQYNPI---------------NASPPGIDVDIKDGGSGSSRHGELAKSPLRDPEPEGERRRGFHNQNESKI---RASVDCDATGRNDGHQATEDRRAGEGS---ITGGDGRGRGKRGVQ---------------RRVR--LSSPPTPXXXXXRATVVPPSPSAALIKPDSFDYLTAEDIRPSPNPSQEMQRAMASLPRDGWPEIFHTLNSVRRLATHHSPLLGSQSHLHALVRDVLGQSENLRSQVAKNALLTLADLWRGLGDTLDPELPMVCPILVKKMADKVEFLAEAARECVDEVVATATESRALSAFLTCGSHRSPAVRAKSALAVLLCVRRR--YCHPTSETAPLQLSGAASSRRSGVRIDKRNGGGGGAGHAGSMGAREMDRLLSALPRFLQ---------------------GEVDEARLRREIPPPILERLQRELLNFSLPSGPGFTAPNSDAASATPYSAGSSFSSSSYLSRSGRNDVGARISRRLGATGPVPSSSGPGVSSPGSSFSPTAGHRGGSGGVGDGNRDIRRRXXXXXXXXXXXXXXGEERWIAAAPGESWR--REQEG------ARGEL-GDSDDDDGCGSDFAGGLGMGSLSTPPHRASPSVPRSRNWA 1955
BLAST of mRNA_C-linearis_contig110.1431.1 vs. uniprot
Match: A0A7S3YBP5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YBP5_HETAK) HSP 1 Score: 194 bits (494), Expect = 6.930e-52 Identity = 109/255 (42.75%), Postives = 153/255 (60.00%), Query Frame = 1
Query: 5536 YLTAEDIRPCPNPSQELQRTMASLPRDNWPEIFHTLNSVRRLAMHHAALLGSQSHLHALVRDVLAQSENLRSQVAKNALLALADLWRGLGDTLDPELPMVCPGLVKKLADKVEFLAEAARECVDEVVATATESRALSAFLACGSHRSPALRAKAALAILLCVRQRCYYCSADPSSSRVFSQRGRGDRGAGGRAGGVCVGAREVDRLLSALPRFLQQDGNQETRHHAKAIVAVLIDTGEVDEVRLRREIPPPILER 6300
+ +DIRP PNPS ELQRT+ +LP WPE+FHTLN+VRRL +HH ALL + HLH +VRDVL QSENLRS V KNA+L LADLWRGLG T DPEL +V P L+K++A+ FL + A E + +V AT RAL AF+ C ++P +RA+ A+ + V++ G+R + ++EV ++L +P FLQ D N +TR + + ++ L+ G E L R +P +L++
Sbjct: 10 HAKTDDIRPSPNPSHELQRTLRALPNGEWPEVFHTLNAVRRLGLHHGALL--EPHLHGVVRDVLKQSENLRSAVKKNAILTLADLWRGLGPTCDPELALVAPVLIKRVAESNGFLIDTAEEAIATIVDRATPRRALEAFICCSRSKNPQIRAETAIVVYKLVQR-------------------MGNR--------LRPNSKEVAKILEEMPLFLQ-DANPKTRTYGRHLLHHLLGAGLATEEELGRAVPAHVLKK 234
BLAST of mRNA_C-linearis_contig110.1431.1 vs. uniprot
Match: A0A835ZHW3_9STRA (TOG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHW3_9STRA) HSP 1 Score: 193 bits (490), Expect = 2.460e-45 Identity = 132/325 (40.62%), Postives = 162/325 (49.85%), Query Frame = 1
Query: 5485 VFPP--SPNSSLSKPDSFDYLTAEDIRPCPNPSQELQRTMASLPRDNWPEIFHTLNSVRRLAMHHAALLGSQSHLHALVRDVLAQSENLRSQ-------------------------------------------------------VAKNALLALADLWRGLGDTLDPELPMVCPGLVKKLADKVEFLAEAARECVDEV---------------VATATESRALSAFLACGSHRSPALRAKAALAILLCVRQRCYYCSADPSSSRVFSQRGRGDRGAGGRAGGVCVGAREVDRLLSALPRFLQQDGNQETRHHAKAIVAVLIDT 6243
V PP +P ++L PD+FDYL +D+RP PN EL R +ASL RD+WPEIFHTLN+ RRLA HHA L+ ++H L RDVL +NLRSQ VAKNALL L DLW+GLG LDPELP+V P L+KK DKV+FL +AA V++V VA AT+ RALSAFL C + R+ LRAKAA +L CVR R G RE +R+L ALP FLQ DG+QETR H KA+ L++T
Sbjct: 1228 VEPPRATPGAALC-PDAFDYLGWDDLRPSPNAKAELARALASLARDDWPEIFHTLNAARRLARHHAPLV--EAHARELTRDVLRHVDNLRSQXXXXXXXXXXXXXXXXXXXXCSISTSISDVPLVSRXXXXXXXXXXXXXXXXXXXXVAKNALLTLGDLWKGLGRALDPELPLVAPVLIKKYTDKVDFLRQAAEGAVEDVXXXXXXXXXXXXXXXVANATDVRALSAFLGCSAARAAPLRAKAAATVLKCVR----------------------------RVGARLSACREAERVLQALPLFLQ-DGHQETRAHGKALTRYLLET 1520
BLAST of mRNA_C-linearis_contig110.1431.1 vs. uniprot
Match: A0A7S1XTX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTX9_9STRA) HSP 1 Score: 142 bits (358), Expect = 7.840e-33 Identity = 96/258 (37.21%), Postives = 133/258 (51.55%), Query Frame = 1
Query: 5536 YLTAEDIRPCPNPSQELQRTMASLPRDNWPEIFHTLNSVRRLAMHHAALLGSQSHLHALVRDVLAQSEN-LRSQVAKNALLALADLWRGLGDTLDPELPMVCPGLVKKLADKVEFLAEAARECVDEVVATATESRALSAFLACGSHRSPALRAKAALAILLCVRQRCYYCSADPSSSRVFSQRGRGDRGAGGRAGGVCVGAREVDRLLSALPRFLQQDGNQETRHHAKAIVAVLIDTGEVDEVRLRREIPPPILERLQ 6306
YL + +I P P ELQ + +L D WP++FH L+SVR LA+HHAAL+ + H + R VL ++N LRS V KNA+L + DLW GLG LD E+P L+K+ AD FL E A +D ++ +E R L+AF+A SHRS +R KAAL I C++ GAG G AR +D LL L L+ D + R A+ + L+D V +L R + P + RL+
Sbjct: 91 YLESAEIVPSAKPKAELQHVLRNLNNDEWPDVFHMLDSVRCLALHHAALMAGR-HATEVCRAVLRVADNNLRSAVVKNAILCVGDLWDGLGAALDAEIPRAAAILLKRAADTSGFLQEQADVAIDSLIRNGSELRPLTAFMASASHRSATIRGKAALGIFRCLQH----------------------LGAGFANGD----ARALDGLLKCLAALLE-DSASDARQCARLSIKQLLDARVVTRDKLGRFLDPSAMNRLE 320
BLAST of mRNA_C-linearis_contig110.1431.1 vs. uniprot
Match: A0A4D9CTV7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTV7_9STRA) HSP 1 Score: 115 bits (289), Expect = 4.160e-22 Identity = 88/292 (30.14%), Postives = 142/292 (48.63%), Query Frame = 1
Query: 5491 PPSPNSSLSKPDSFDYLTAEDIRPCPNPSQELQRTMASLPRDNWPEIFHTLNSVRRLAMHHAALLGSQS--HLHALVRDVLAQSENLRSQVAKNALLALADLW-------------RGLGDTLDPEL-----PMVCPGLVKKLADKVEFLAEAARECVDEVVA-TATESRALSAFLACGSHRSPALRAKAALAILLCVRQRCYYCS----------ADPSSSRVFSQRGRG------DRGAGGRAGGVCVGAREVDRLLSALPRFLQQDGNQETRHHAKAIVAVLIDTGEVD 6255
P P+S+ + + YLT +RP P+P+Q L + SLP +WPE FH+L ++RRLA+HH +L + S L L+ ++ +NLRS VAKNALL LAD+W +G + +DP L P++ P L+++ D FLA+ A + V+ T +R LSA L +H+ P R + A + C+ + S P + R+ ++ G D + G + A +RL A ++L D + ETR + IV +L ++ + +
Sbjct: 460 PVGPSSAPTHTPTIQYLTIAQLRPLPDPNQSLTHLVTSLPTADWPENFHSLTTIRRLALHHPDILFALSPPSLRLLLVELFRLIDNLRSAVAKNALLTLADIWSHAGRAPKPKHSEKGSVEGIDPRLLENALPILVPPLLRRCCDTSGFLAQTAEAAFEAVIHHTPDMARLLSALLPMAAHKHPLARRRVATVVRQCLSRLAATSSFVSPVTGAGSVGPLTKRMHRKKRAGNAIAAADGSKNKQVGCDTLSAELRERLKKAKEKWLS-DADAETRAEGRKIVEILQNSSDAN 750
BLAST of mRNA_C-linearis_contig110.1431.1 vs. uniprot
Match: A0A1Y1HNE7_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HNE7_KLENI) HSP 1 Score: 116 bits (291), Expect = 5.190e-22 Identity = 100/327 (30.58%), Postives = 158/327 (48.32%), Query Frame = 1
Query: 5437 GVSPPPASG--GRAGRAMVFPPSPNSSLSKPDSFDYLTAEDIRPCPNPSQELQRTMASLPRDN----------WPEIFHTLNSVRRLAMHHAALLGSQSHLHALVRDVLAQSENLRSQVAKNALLALADLWRGLGDTLDPELPMVCPGLVKKLADKVEFLAEAARECVDEVVATATESRALSAFLACGSHRSPALRAKAALAILLCVRQRCYYCSADPSSSRVFSQRGRGDRGAGGRAGGVCVGAREVDRLLSALPRFLQQDGNQETRHHAK----AIVAVLIDTGEVDEVRLRREIPPPILERLQRELLNSS----LPSGPGFTAP 6357
G+SPP +SG G GR + ++ +KP D + ED++PC P +E++ ++ L R N W E + +N +RR A+HH A L Q L A V ++ +NLRS +AKNAL+ +L+ LG +D L V P L K+ A+ FL+ A + ++A +++RAL+A LA H++P +RA+ A I CVR+ P SR ++RL S L FL + GN ETR K A+ +L +G+ + L +++ P + RE++ ++ LP PG +P
Sbjct: 999 GMSPPKSSGRGGMTGRDLA------AAAAKP--MDEILTEDLQPCAYPEREVREAVSCLVRANLQRPNQGTIDWSEQYEAINVIRRAAVHHVAQL--QPELKAAVVALVPSCDNLRSSLAKNALVCFQELFSFLGRAMDAHLDAVVPTLAKRAAENSAFLSAEADIALGAMIANVSDARALAALLAIAGHKTPGVRARVAAHIEACVRKM------GPRCSREL-----------------------LERLFSQLLMFLDE-GNIETRIFGKRSLFALSRLLASSGDFEP--LLKKVSNPAKLKAVREVVAANAPPPLPREPGKASP 1283
BLAST of mRNA_C-linearis_contig110.1431.1 vs. uniprot
Match: A0A7S4PLE0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PLE0_GUITH) HSP 1 Score: 113 bits (283), Expect = 3.250e-21 Identity = 61/193 (31.61%), Postives = 111/193 (57.51%), Query Frame = 1
Query: 7003 ELLPAVYARLDSGDWRERLKGLEEATVLLEEHGSGLHAAGKSARLLDRMAELLSDGNLKVNLLALEGVVRLGPSLGSKLESVVNTLVPAVCKNLASSNQQRIALAEEALDALCEAIDPCLIVQPVSSLAQYGNARLKVPMLTLLRNITPEVGEVKPILLTKYVRPAALSLVRESQPNVRDVGLSLLREVEIAL 7581
+ +P + + ++S D+R R + E T L+ + + +++ +D L D N+KV L AL+GV R+ + G L+S LVPAVC NL++++ Q LA L+++C ++DP ++ QP+ S ++GN R + +L +R + P++G KP+LL K +A+ L+ E + +VR +L+ E+ A+
Sbjct: 781 DRVPLIASSINSNDFRSRYDAVNELTELILKEPQVFQS--RTSYFVDMFIGRLGDNNVKVALAALQGVDRVVETYGGMLDSSAAVLVPAVCANLSNTSPQIRTLASSVLESICNSVDPTVLAQPLCSSLEFGNQRARPALLERMRELVPQLGTKKPVLLQKLFLTSAIKLLEEHKSDVRAANSALVVELYNAM 971
BLAST of mRNA_C-linearis_contig110.1431.1 vs. uniprot
Match: A0A225X4B9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X4B9_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.760e-20 Identity = 69/204 (33.82%), Postives = 116/204 (56.86%), Query Frame = 1
Query: 6973 SNKVFHSREAELLPAVYARLDSGDWRERLKGLEEATVLLEEHGSGLHAAGKSARLLDRMAELLSDGNLKVNLLALEGVVRLGPSLGSKLESVVNTLVPAVCKNLASSNQQRIALAEEALDALCEAIDPCLIVQPVSSLAQYGNARLKVPMLTLLRNITPEVGEVKP-ILLTKYVRPAALSLVRESQPNVRDVGLSLLREVEIAL 7581
SN +A+ L + +LDS +W++R L E T + S L ++G L D + + L DGN KVN+LALE + ++ P++GS +E ++ + VPA+ KNLA N + +LA+ + LC D + Q + A+ N+R+ +L L +T E + K +LT++V P AL L++E++ +V++ L LLR++ I L
Sbjct: 1184 SNATRSKIDADKLLRLETKLDSRNWKDRFDALNETTDFICSCASALVSSGHMLSLFDLLIKRLDDGNAKVNVLALECMDKIVPAIGSGMEQMLPSFVPAIAKNLA--NARTSSLAQSVVQQLCTYADNRALCQQFAIQARSANSRVIPMLLDTLTQLTMESYDDKSNYVLTRHVLPLALDLLKEAKNSVKEANLRLLRQLRITL 1385
BLAST of mRNA_C-linearis_contig110.1431.1 vs. uniprot
Match: A0A5A8CZ31_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CZ31_CAFRO) HSP 1 Score: 106 bits (264), Expect = 6.160e-19 Identity = 74/248 (29.84%), Postives = 117/248 (47.18%), Query Frame = 1
Query: 5536 YLTAEDIRPCPNPSQELQRTMASLPRDNWPEIFHTLNSVRRLAMHHAALLGSQSHLHALVRDVLAQSENLRSQVAKNALLALADLWRGLGDTLDPELPMVCPGLVKKLADKVEFLAEAARECVDEVVATATESRALSAFLACGSHRSPALRAKAALAILLCVRQRCYYCSADPSSSRVFSQRGRGDRGAGGRAGGVCVGAREVDRLLSALPRFLQQDGNQETRHHAKAIVAVLIDTGEVDEVRLRREI 6279
Y ED+ NPS + ++ L +W + LNS+R LA HH L ++ L ++R L + +LRS VAK A++A+ADL RG G +LD EL P L++K AD EF+A A + VV +R LS+FL C H++ +R +A R ++ + G G R +D ++ A R+ + G ++ RH K ++ +L G +D+ L R +
Sbjct: 671 YTAFEDLPEVRNPSHAVPASLKGLASGDWQQEIDALNSIRSLAKHHPEAL--EARLSEVLRACLPAANSLRSAVAKTAIMAIADLARGTGRSLDSELDRAVPMLLRKAADTSEFIASEADTALATVVQHCGHTRLLSSFLLCARHKAKLVRLQA---------------------GRWLAELAQA-------IGPKLAGLRNLDEVIQAAARYAAE-GREDARHAGKRLLLLLSAAGALDKGALERAV 887 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig110.1431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig110.1431.1 >prot_C-linearis_contig110.1431.1 ID=prot_C-linearis_contig110.1431.1|Name=mRNA_C-linearis_contig110.1431.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2529bp MSAAATPNCGDGSGRHTRSNLDSIGRERKGDEKESSGTMQLLDRLGYGLVback to top mRNA from alignment at C-linearis_contig110:31522..48090- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig110.1431.1 ID=mRNA_C-linearis_contig110.1431.1|Name=mRNA_C-linearis_contig110.1431.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=16569bp|location=Sequence derived from alignment at C-linearis_contig110:31522..48090- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig110:31522..48090- >mRNA_C-linearis_contig110.1431.1 ID=mRNA_C-linearis_contig110.1431.1|Name=mRNA_C-linearis_contig110.1431.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=15174bp|location=Sequence derived from alignment at C-linearis_contig110:31522..48090- (Chordaria linearis ClinC8C monoicous)back to top |