mRNA_C-linearis_contig11.1419.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1419.1
Unique NamemRNA_C-linearis_contig11.1419.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig11.1419.1 vs. uniprot
Match: D8LKG0_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG0_ECTSI)

HSP 1 Score: 637 bits (1644), Expect = 1.420e-225
Identity = 336/515 (65.24%), Postives = 372/515 (72.23%), Query Frame = 1 
Query:    1 MQHEDSKGCVWTEEQDAEGYVYYVNANTLETAWELPPSVREAGSSALVPLQEPSPSWTEVFDDSTNSTYFFNTSTQESSWDLGTDDRLASGIYHPSDGDGTAVGEYYGTSQEQEGEEAHAPHSGPPTLVLTPPNQVLKDFQVPQEVSEAVGRAGSAHTWPKTLDGRPSRLERWDVLKAN-PYREHLATGEAWRLSHPEFEPKLCFYAFDTAVEHVEASRYWVEEAEAPFRCRLQKDGLKFSRDISKWEERAPVRRKNKK---------GGEEEGDKFTSENERCGRGSDGGGSNAGGGRGTECECGGGASFFAFPLVVHNSHAHHVDWTSGPDRYQITQGREPEWGWTRLFTFFAYAASKYHVLETTDVPLAQKASESFYILKGNFLTPEPGWKCVLAFFAFDDDVPGSNRYYVEEKDEPHLRTRVGMEASCRWEARHTFAAFDVPVPGSCALDVHYTVRSTDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHVLLSPDLECFDAQDSLSGS 1515
            MQ+EDSKG +W EEQD +G VY+VNA+T+E                                               SSWDLGTD+RLASGIYHPS GD  A+   Y +SQ  E E +         +  +  ++VL  FQVPQEVSEAVGRAGSAH WP+T+DGRPSRLERWDVLKA+ PYREH +TGEAWRL HPEFEPKLCFYAFDTAVEHVE  RYWVEEAEAPFRCRLQ+DGLKFSRDI+ WE RAP ++ +           GG+ +GD+        G G DG                 GA FFAFPLVVHNSHAHHVDWTSGPDRYQITQ  EPEWGWTRLFTFFAYAASKYHVLETT  PLAQK      I+KGNFLTPEPGWKCVLAFFAF+D VPGSNRYY+EEKDEPHLRTR+GMEASCRW+ARH+FAAFDVPVPGSCALDVHYT+RSTDSLNPYPEQCRISLKDPWG+WEQKFRFYAFPAE VLLSP+L+  D QD LSGS
Sbjct:    1 MQYEDSKGDLWVEEQDDDGDVYFVNADTME-----------------------------------------------SSWDLGTDERLASGIYHPSGGDDDALIGPYSSSQTLEAESS---------ISSSWRDEVLVGFQVPQEVSEAVGRAGSAHIWPRTVDGRPSRLERWDVLKASDPYREHFSTGEAWRLEHPEFEPKLCFYAFDTAVEHVE--RYWVEEAEAPFRCRLQRDGLKFSRDIATWEARAPAKKNDNDKGNSGVGSPGGDLDGDEHWGGE---GVGGDGRXXXXXXXXXXXXXXXXGAGFFAFPLVVHNSHAHHVDWTSGPDRYQITQDSEPEWGWTRLFTFFAYAASKYHVLETTQAPLAQK------IVKGNFLTPEPGWKCVLAFFAFNDMVPGSNRYYIEEKDEPHLRTRIGMEASCRWDARHSFAAFDVPVPGSCALDVHYTIRSTDSLNPYPEQCRISLKDPWGSWEQKFRFYAFPAEQVLLSPELDS-DTQDVLSGS 447
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BLAST of mRNA_C-linearis_contig11.1419.1 vs. uniprot
Match: A0A7S3Y5K5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5K5_HETAK)

HSP 1 Score: 196 bits (498), Expect = 4.710e-55
Identity = 129/353 (36.54%), Postives = 171/353 (48.44%), Query Frame = 1 
Query:  451 GRAGSAHTWPKTLDGRPSR------LERWDVLKA----NPYREHLATGEAWRLSHPEFEPKLCFYAFDTAVEHVEASRYWVEEAEAPFRCRLQKDGLKFSRDISKWEERAPVRRKNKKGGEEEGDKFTSENERCGRGSDGGGSNAGGGRGTECECGGGASFFAFPLVVHNSHAHHVDWTSGPDRYQITQGREPEWGWTRLFTFFAYAASKYHVLETT-DVPLAQKASESFY-ILKGNFLTPEPGWKCVLAFFAFDDDVPGSNRYYVEEKDEPHLRTRVGMEASCRWEARHTFAAFDVPVP--GSCALDVHYTVRSTDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHVLL 1467
            G +G  HT  + +    SR      LER +VL+      PYR+     EA  +    F     FYAF  AV H  A    VE   AP R R ++  + F RDI+KW E       +KK      DKF                                  +A+P     ++  HVDW+SGPDRY I+Q   P  GW R F F+AY ASKYHVLE   D+  A+      Y I+KG+++  EPGW+C   F+  DD  PG+N Y+V++++EP  RTR+G+E +  W                G+  + VHY +RSTDS + YP+Q RI+L  P GAWE  F FYAFPA  V L
Sbjct:    1 GASGKKHT--QAIHAALSREFQVPKLERINVLEPLSQPEPYRQRFTRQEADEVDWSTF---ATFYAFAEAVPH--ADPVAVEAHPAPRRHRARRPRITFPRDITKWNE-------SKK------DKF----------------------------------YAYPQTYQGTNEFHVDWSSGPDRYMISQDGLPRMGWKRQFQFYAYGASKYHVLEKVLDMATARPGERPGYKIVKGHYIPAEPGWRCRFGFYGLDDPAPGANLYHVQDQEEPFYRTRIGLERATHWXXXXXXXXXXXXXXXHGTSKVSVHYMIRSTDSEDVYPDQHRITLGLPSGAWEHLFDFYAFPAPSVQL 299
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BLAST of mRNA_C-linearis_contig11.1419.1 vs. uniprot
Match: A0A836CAN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN8_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.170e-54
Identity = 87/174 (50.00%), Postives = 115/174 (66.09%), Query Frame = 1 
Query:  946 VDWTSGPDRYQITQGREPEWGWTRLFTFFAYAASKYHVLETTDVPLAQKASESFYILKGNFLTPEPGWKCVLAFFAFDDDVPGSNRYYVEEKDEPHLRTRVGMEASCRWEARHTFAAFDVPVPGSCALDVHYTVRSTDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHVLL 1467
            +DWTSGPDRY ++ G EP WGWTR+FT  A+A SKYH+LE  D P       S+ I+KG  + PE  W+C  AFFAFD  VPGS + +V+ + EPH+R+RV +  S RWE   +   F +P+P +   +VHYTVRS +SL+ +PEQ RI L +P   WE K  FYA+P+  VLL
Sbjct:    1 MDWTSGPDRYCVSVGDEPSWGWTRVFTMHAFAVSKYHLLERLDPP-------SYRIVKGTHIKPERDWRCCFAFFAFDGPVPGSTQLFVQMRGEPHIRSRVALTHSERWEDHLSMYVFCMPMPNTAQFNVHYTVRSAESLDAFPEQDRIHLGEPRDRWELKLTFYAYPSPVVLL 167
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BLAST of mRNA_C-linearis_contig11.1419.1 vs. uniprot
Match: A0A7S4E3X4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3X4_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.600e-35
Identity = 81/205 (39.51%), Postives = 112/205 (54.63%), Query Frame = 1 
Query:  898 SFFAFPLVVHNSHAHHVDWTSGPDRYQITQGREPEWGWTRLFTFFAYAASKYHVLETTDVPLAQKASESFYILKGNFLTPEPGWKCVLAFFAFDDDVPGSNRYYVEEKDEPHLRTRVGMEASCR---WEARHT-FAAFDVPVPGSCALDVHYTVRSTDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHVLLSP--DLECFDA 1494
            SFFA P         H+DWTS PDRY ++    P   W R F FFAY A+K+H+LE    P   + + S+ ++ G+       W+C+ AFFAFD  VP +N+Y +++  + + R RVGM AS R   W+     F A+DVPVPG+    V Y VR  D  N   EQ R+S+    G W +KF FY +PA  + L    D E ++A
Sbjct:  265 SFFALPEPQPGLSEFHIDWTSAPDRYMVSTEYRPAAAWLRCFRFFAYKATKFHLLERV-WPHGSELTTSYRLVAGHECPVNAHWRCLFAFFAFDSCVPNANQYTIQQSVDGYDRLRVGMTASIRPGEWDPNDLKFYAYDVPVPGTAKFSVQYRVR--DGTNMECEQNRLSIDHAVGPWVEKFVFYGYPAPTIELEAPKDEELYEA 466
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BLAST of mRNA_C-linearis_contig11.1419.1 vs. uniprot
Match: A0A7S2S6V9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6V9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.070e-34
Identity = 117/437 (26.77%), Postives = 174/437 (39.82%), Query Frame = 1 
Query:  205 YFFNTSTQESSWDLGTDDRLASGIYHPSDGDGTAVGEYYGTSQEQEGEEAHAPHSGPPTLVLTPPN----QVLKDFQVPQEVSEAVGRAGSAHTWPKTLDGRPS-RLERWDVLKANPYREHLATGEAWRLSHPEFEPKLCFYAFDTAVEHVEASRYWVEEAEAPFRCRLQKDGLKFS--RDISKWEERAPVRRKNKKGGEEEGDKFTSENERCGRGSDGGGSNAGGGRGTECECGGGASFFAFPLVVHNSHAHHVDWTSGPDRYQI-TQGREPEWGWTRLFTFFAYAASKYHVLETTDVPLAQKASES--------FYILKGNFLTPEPGWKCVLAFFAFDDDVPGSNRYYVEEKDEPHLRTRVGMEASC--RWEARHTFAAFDVPVPGSCALDVHYTVRSTDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHV 1461
            Y+++T+T E++W+L     L                      QE  GEE  AP +    L          +++  F+V  +V E     G  H +P      P  R+  ++ L    ++  ++ G+        + P    Y F  A E  +     VE    PF  RL+  G      RDIS W+   P+ +                                              F+ +P  +H +    +DW+S PDRY+I T     E GW R   F A+AASKYH+LE + V  + +AS S        + I KGNF   + GW+C+ AF+AFD+  PG++RYY + K +P+   RVG E +    WE                   V Y  +  DS    PEQ R+   D W  W +K  FYA+PA  +
Sbjct:   86 YYYDTATGETAWELPPGAALV---------------------QEDAGEEPVAPEASFTQLFGADAKAWKREIMASFEVAPQVPEIQSNEGKRHIFPHCDPVSPLVRISVFENLDPPRHKIAVSLGDVVDEGTDYWRPVQYLYVF--ACEMPDTIPLEVELRRDPFGNRLKFFGKSNPQPRDISNWKSYTPIPK---------------------------------------------GFYVYPAPMHGTSPFFLDWSSAPDRYKISTSIASSELGWLRCLRFEAFAASKYHILEGSFVDESMEASMSVGAIPRLSYRIHKGNFCPCDQGWRCIFAFYAFDNPGPGTSRYYCQHKVDPYYTIRVGKEPTYIHDWEDYAXXXXXXXXXXXXXXFSVDYVTQDVDSRTDTPEQSRVFFHDTWEPWVEKLHFYAYPAPSI 454
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BLAST of mRNA_C-linearis_contig11.1419.1 vs. uniprot
Match: A0A7S3K3X8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3X8_9STRA)

HSP 1 Score: 134 bits (337), Expect = 4.450e-31
Identity = 106/343 (30.90%), Postives = 153/343 (44.61%), Query Frame = 1 
Query:  508 LERWDVLKAN--PYREHLATGEAWRLSHPEFEPKLCFYAFDTAVEHVEAS--RYWVEEAEAPFRCRLQKDGLKFS--RDISKWEERAPVRRKNKKGGEEEGDKFTSENERCGRGSDGGGSNAGGGRGTECECGGGASFFAFPLVVHNSHAHHVDWTSGPDRYQITQGRE--PEWGWTRLFTFFAYAASKYHVLETTDVPLAQKASESFYILKGNFLTPEPGWKCVLAFFAFDDDVPGSNRYYVEE--KDEPHLRTRVGME-ASCR-WEARHTFAAF--DVPVPGSCALDVHYTVRSTDSLNPYPEQCRISLKD---PWGA---WEQKFRFYAFPAEHVLLSPD 1476
            L R ++ K++  PYRE       W  +   ++  L  Y F      +E    RY +E AE P R RL+ DG +    RD ++W+                         R GR                        F+AFP    N+    VDWTSGPDRY+I +  E  PE GW R F FFAY A+KYH+L   D P     S S+ I+ G+    +  W+C  AFFA D+  PG+N+Y++++  + E + R R+GM  A C  W+    F  +  D+P P +   +V Y +R         EQ R+++ D   P      W  KF  + +PA  + L PD
Sbjct:   48 LIRLNIQKSSRPPYRERFC----WNDADDRWQASLYLYVFPHLPPGLEQCLRRYVLERAENPIRSRLRWDGQQKPQRRDATEWKAL-----------------------RSGRN----------------------DFWAFPERTANAQELAVDWTSGPDRYRIIRHPESRPEAGWLRCFRFFAYPATKYHILYR-DWPSGAPVSTSYRIISGHLCPVQRPWRCAFAFFALDEQAPGTNKYFIQKTPQSEYYPRIRIGMTPAQCGGWDPHDQFIFYAPDMPWPCTAKFNVQYKMRGGPDAEL--EQNRLAIADILAPHACGSLWTDKFAIFLYPAPTIDLEPD 338
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BLAST of mRNA_C-linearis_contig11.1419.1 vs. uniprot
Match: A0A7S2AWR6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AWR6_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.010e-16
Identity = 41/112 (36.61%), Postives = 57/112 (50.89%), Query Frame = 1 
Query: 1138 EPGWKCVLAFFAFDDDVPGSNRYYVEEKDEPHLRTRVGMEASC--RWEARHTFAAFDVPVPGSCALDVHYTVRSTDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHVLL 1467
            E GW+C+ AF+AFD+ +PG+ RYYV+E+ EPH R RVG E +                         VH+  +S ++     EQ RI   D W  W+QK  FYA+ A  +L 
Sbjct:    3 EEGWRCLFAFYAFDEMIPGTTRYYVQEQFEPHQRIRVGQEPTYFHGXXXXXXXXXXXXXXXXXXXFSVHFLTQSPETRTAVAEQSRIFFGDAWEPWQQKCNFYAYAAPTMLF 114
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LKG0_ECTSI1.420e-22565.24WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A7S3Y5K5_HETAK4.710e-5536.54Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A836CAN8_9STRA2.170e-5450.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4E3X4_9STRA2.600e-3539.51Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2S6V9_9STRA1.070e-3426.77Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3K3X8_9STRA4.450e-3130.90Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A7S2AWR6_9STRA1.010e-1636.61Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3663630..3669277 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWW domain
Ec32 orthologEc-16_002840.1
Exons10
Model size1518
Cds size1518
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1419.1prot_C-linearis_contig11.1419.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 3663630..3669277 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927471.5369165-CDS-C-linearis_contig11:3663629..36637161622927471.5369165-CDS-C-linearis_contig11:3663629..3663716Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3663630..3663716 +
1690879720.686823-CDS-C-linearis_contig11:3663629..36637161690879720.686823-CDS-C-linearis_contig11:3663629..3663716Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3663630..3663716 +
1622927471.550362-CDS-C-linearis_contig11:3663936..36640771622927471.550362-CDS-C-linearis_contig11:3663936..3664077Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3663937..3664077 +
1690879720.6980383-CDS-C-linearis_contig11:3663936..36640771690879720.6980383-CDS-C-linearis_contig11:3663936..3664077Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3663937..3664077 +
1622927471.5640826-CDS-C-linearis_contig11:3664448..36645701622927471.5640826-CDS-C-linearis_contig11:3664448..3664570Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3664449..3664570 +
1690879720.70592-CDS-C-linearis_contig11:3664448..36645701690879720.70592-CDS-C-linearis_contig11:3664448..3664570Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3664449..3664570 +
1622927471.575401-CDS-C-linearis_contig11:3664840..36650251622927471.575401-CDS-C-linearis_contig11:3664840..3665025Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3664841..3665025 +
1690879720.7160175-CDS-C-linearis_contig11:3664840..36650251690879720.7160175-CDS-C-linearis_contig11:3664840..3665025Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3664841..3665025 +
1622927471.5913785-CDS-C-linearis_contig11:3665695..36658111622927471.5913785-CDS-C-linearis_contig11:3665695..3665811Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3665696..3665811 +
1690879720.7263668-CDS-C-linearis_contig11:3665695..36658111690879720.7263668-CDS-C-linearis_contig11:3665695..3665811Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3665696..3665811 +
1622927471.6076288-CDS-C-linearis_contig11:3666735..36670321622927471.6076288-CDS-C-linearis_contig11:3666735..3667032Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3666736..3667032 +
1690879720.7344513-CDS-C-linearis_contig11:3666735..36670321690879720.7344513-CDS-C-linearis_contig11:3666735..3667032Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3666736..3667032 +
1622927471.6247475-CDS-C-linearis_contig11:3667439..36676011622927471.6247475-CDS-C-linearis_contig11:3667439..3667601Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3667440..3667601 +
1690879720.7447271-CDS-C-linearis_contig11:3667439..36676011690879720.7447271-CDS-C-linearis_contig11:3667439..3667601Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3667440..3667601 +
1622927471.6374876-CDS-C-linearis_contig11:3668118..36682101622927471.6374876-CDS-C-linearis_contig11:3668118..3668210Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3668119..3668210 +
1690879720.752955-CDS-C-linearis_contig11:3668118..36682101690879720.752955-CDS-C-linearis_contig11:3668118..3668210Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3668119..3668210 +
1622927471.6499884-CDS-C-linearis_contig11:3668520..36687191622927471.6499884-CDS-C-linearis_contig11:3668520..3668719Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3668521..3668719 +
1690879720.7609565-CDS-C-linearis_contig11:3668520..36687191690879720.7609565-CDS-C-linearis_contig11:3668520..3668719Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3668521..3668719 +
1622927471.6622696-CDS-C-linearis_contig11:3669160..36692771622927471.6622696-CDS-C-linearis_contig11:3669160..3669277Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3669161..3669277 +
1690879720.7689338-CDS-C-linearis_contig11:3669160..36692771690879720.7689338-CDS-C-linearis_contig11:3669160..3669277Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3669161..3669277 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1419.1

>prot_C-linearis_contig11.1419.1 ID=prot_C-linearis_contig11.1419.1|Name=mRNA_C-linearis_contig11.1419.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=506bp
MQHEDSKGCVWTEEQDAEGYVYYVNANTLETAWELPPSVREAGSSALVPL
QEPSPSWTEVFDDSTNSTYFFNTSTQESSWDLGTDDRLASGIYHPSDGDG
TAVGEYYGTSQEQEGEEAHAPHSGPPTLVLTPPNQVLKDFQVPQEVSEAV
GRAGSAHTWPKTLDGRPSRLERWDVLKANPYREHLATGEAWRLSHPEFEP
KLCFYAFDTAVEHVEASRYWVEEAEAPFRCRLQKDGLKFSRDISKWEERA
PVRRKNKKGGEEEGDKFTSENERCGRGSDGGGSNAGGGRGTECECGGGAS
FFAFPLVVHNSHAHHVDWTSGPDRYQITQGREPEWGWTRLFTFFAYAASK
YHVLETTDVPLAQKASESFYILKGNFLTPEPGWKCVLAFFAFDDDVPGSN
RYYVEEKDEPHLRTRVGMEASCRWEARHTFAAFDVPVPGSCALDVHYTVR
STDSLNPYPEQCRISLKDPWGAWEQKFRFYAFPAEHVLLSPDLECFDAQD
SLSGS*
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mRNA from alignment at C-linearis_contig11:3663630..3669277+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1419.1 ID=mRNA_C-linearis_contig11.1419.1|Name=mRNA_C-linearis_contig11.1419.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5648bp|location=Sequence derived from alignment at C-linearis_contig11:3663630..3669277+ (Chordaria linearis ClinC8C monoicous)
ATGCAGCACGAGGACTCGAAAGGTTGTGTGTGGACGGAGGAGCAGGATGC
GGAGGGCTATGTGTACTACGTGAACGCCAATACACTGGTGAGCAGTCTCG
AATCTATGTATGCACCCAACAGCAACACCTCTCGGAGTGGAATGTGTGTA
GCTAGGCATATAGCAAGGCGATGATGCCGAAGGAACCGCGGCCTGCTATT
ATTGTAGACTACGCGTGAAAAATGTCTTGTTCATTGTATCCCTCGCCCCT
GCTTTTGCCGGGTGCTCTTGCCACGGGGATCCTGAACGGGGATCCTGCAT
CCTTTAGGAGACTGCATGGGAGTTGCCACCCTCCGTTAGGGAGGCGGGAT
CGTCCGCGCTTGTGCCACTACAGGAGCCATCGCCGAGTTGGACGGAAGTG
TTTGACGACTCGACAAATAGCACGTATTTCTTCAACACGTCTACTCAGGT
ACGGGGCATCTGGATCGTGAGAACCCTGGACCATTTTCGCCCTCTGCGTA
CAACGTGCGATAAGGTCTTGGCCCACAGATTGTGTCACCCACTATACTAG
GATCTATTGGGGGCGACTGCAGCCAATCTGGTGGATTCTTGCCCGCTATT
GCTGTGCATTCCTAGTGTTGTCTACCATATAAAAGTAGTACAAGAGCGCC
ATTCGAATACGGAGTACTTCTTTAGCACGGGTCATCTTTGGCAGGGCTAC
AGGCACACCATCTACGTACAATACTTCTAGTCTTTGGGCGGATGATTGTC
GTCGACAATGCCTCATCACCACCGCTGAATCAAACACGCGGTCGGTTTAT
TTGTTTGTGCCGAGCGAAGGAAAGTTCCTGGGACCTTGGAACGGATGATC
GACTAGCTTCGGGCATATACCATCCCTCGGATGGAGACGGAACCGCTGTG
GGAGAGTACTACGGCACCAGCCAAGAACAGGAGGGAGAGGAGTACACCTC
ATCCAGCTGGCGAGATCAGGCGAGCGGGAAATGCCGCATTGCTTCGCTAT
TATAGGAGCGGTTCAATGGCTTAATGTCAACAAGTCAGCGTGAACTTGAA
CTGATCAATAACCCAGGTGGTGCAGAGATTTACCATACTTAATCAAGACA
CACGAGGGAGGAGCGGTTCAATGGCTTAATGTCAACAAGTCAGCGTGAAC
TCTAACTGATCAATAACCCCGGTGATGCAGAGATTCACCAGACTTAATCA
AGACACACGAGGGCTCATGCTCCACACTCCGGGCCACCGACGTTGGTGCT
GACTCCCCCAAATCAGGTTTTGAAGGATTTCCAAGTACCGCAAGAGGTGT
CGGAGGCAGTCGGAAGGGCCGGATCGGCGCACACTTGGCCGAAGACGTTG
GACGGGCGACCCTCACGGCTAGAACGTTGGGATGTCCTGAAGGCAAGTTA
CACACAATGCGAACGCAAGCGCGACGGTCGCTGGTGCGCACCCCGTGATA
CTTTTTGTTGGAGTTTGCTCAACCGTCTGTCGATGTATTAGGTTCCTGTA
TGCGAAAGGTGGGCAGTACTTGCACAACATGAGACGAAGGACCCAAAACC
ATGACACAACCGGATGTTCTGGCTGAATCCCAGTGTTCGTCTTGTATTCC
TTCTTCACACCAGCGTAGATACTGATGCCGACCGAGCCAAGGAGGGCACT
GGTTGGCGCTACACATTGAGACGAGTGAGCCGGCATGGCCGCGTTGAATG
CGTTGAGGAGTACAAGCACGGCTTTGACATTGATTGTCGGTTCTCCGCCT
TTTCTGCTACTTCTGCGTTTTCACACACACGAACAATTTTCCCTGTAAGT
GAAAGGCCTCACGAGCTGTAGAATCTCTATCGAGACGAAGAAGGCAACGC
AACACGGCCTTATAGCCCAACTTTCGCCACGCGTGCTAAACACAGGCGCC
ATGCGATCGGTTTCCCAGAGCCAAAGCTGCAGACACAGGGGACATGTATG
TACGTACAAGAGGGGCTACTCAGTTTTCAACATGCTTAACGCTCAAATAT
TGGGCGCAATTTGACATCCATCCACCAAAACGGCCCAACCCACCAACTAT
TTGGGTCAGGCGGCAGATCCTTACCGCGAGCACCTTGCCACCGGAGAGGC
GTGGCGTTTGAGTCACCCGGAATTCGAGCCCAAGCTCTGCTTCTACGCCT
TTGACACTGCTGTGGAGCACGTGGAGGCAAGTGTTCAAACCACGCCCCCC
TAAATTTTCCTTCCTAAATCACAACCTCAACAAACACGAATACACCAAGC
ACTTCGTAACAGGAGTGTTCGGCGATGTCACTCAGCAGTCGTGCAGACAC
TCGAGAGACCCAACCTGAGCACCCTGTGCTAGGATTCATTGGACAGGCGT
TGGGGGGACTCGTGATGGGGGAGTATATGGCAGCCAGCTCTTGTTACGTT
CCCGAAGGGATCTCGATTCCAAACACGCATCCAGCGGTACTTCTCGTTCA
CGAAGCAATCCGTAGACTCACAGTCGTTCACAGCGCGGTTTTCAGCTGAT
AAGCCGCTACAGCCCCCGCCACGAGAGGTTTTACTCAGTTCCGATTAGGA
TAGGGCGCAATTTTCAGCTCGTGGTCGGTTAGACTGTGATTAACAGGTCT
CCGACTCTCTTCATGGAAAAGCTGGTCCGAACAGAGGTAAGCACTAGTCT
ATACCTCTTTCTTTCCCTGCGAGAGGATTGCTTCTCGAAGCCCCCCGGTA
CCTGAAATGGTCTAGACATGAGTCTCTACGAAATACTTCGCATCGCCTCA
CATCCAGACCACCAAGGTCCCATCATCGTACTATTTTTGCCCGTGTTAAC
CCAACGGACGCCCGTGAGACTTCCGGTCCAACGCCGTTACAACTTCATGA
AACAAAATTCTCCCCCGCGTGTCCGCTGTAGTACTCTGTACACATAGACC
TTCCTGCCATTCTATGGAAATGAATTACCCTCAAAATCGGGACTCGTCGT
CTTAACACCCTCTGCGGCGAACCGAAGAACCGCGAGATACGCAGAGAAAC
CCAGAGAAAACGCAGCCCAGCAAATAGATGCGTTTTCGGCCAAAACCGAG
GAACAGCTCCCTCATAAACAAAGGCACACGTATGTACGCTGCACCCACCA
TCGCAGAGGTACTGGGTGGAGGAAGCTGAAGCGCCCTTCCGGTGCCGACT
GCAAAAGGATGGGCTCAAGTTCTCCCGCGACATCTCAAAGTGGGAAGAAC
GAGCCCCTGTTAGGCGGAAGAACAAGAAGGGCGGCGAAGAAGAAGGGGAT
AAGTTCACTAGTGAGAACGAACGCTGTGGTCGTGGCAGTGACGGTGGCGG
CAGCAACGCTGGTGGCGGGCGGGGGACGGAATGCGAATGCGGGGGTGGTG
CCAGCTTCTTCGCGTTCCCTCTTGTGGTGCACAACTCCCACGCTCACCAT
GTGGTAAGGATAGCACAAAACGTTGATCCTTACAGCCCAAACAATCGATC
TGTAGTCGCAGAGAAAAACGACTGTGTGAACCAGGTTCTGAGCATATTAG
CCACAAGGAGAACAGGGAGAGCACAATTGCCACGCGGGGGGAACTGTAAC
CGGCTGCAAAGTGCGCGTGCCTATACGAATGAGACTACATCCAACCAGAC
GATACTGTCTGTGGCACCTAGTTTCGAGGCAGGGAAGCCGCCCAAGGCAT
CATTCGGGTCTGATTTCAACCTTCCCTCTCTCTGCTTGCCAAGTCAGTAG
GCACACCACCACCTTCGCTAATCGCAAGAAGAAGAATAAAGTTCCCGGGG
CGAAACGACCGTTTCCCTTGATTCTGCTATGGAACACATATGTATACGCG
GCCTTCACAGGACTGGACTTCGGGCCCCGACCGCTACCAGATAACGCAGG
GGAGGGAGCCGGAATGGGGCTGGACTCGGCTCTTCACTTTCTTCGCCTAC
GCCGCTTCCAAGTACCACGTGTTAGAGACCACGGATGTCCCGCTGGCGCA
GAAGGCAAGCGAGAGCTTTTATGTGGATGAACCCGGGTATGTATATTGTT
TGGTGATGCGGTTGGCTCCGCCCAGGGTCAAACTCTCCCGAGGGAGAATG
CTGCCTTCTACCCCCTTGGTGGGGCGTATCTCTACGAAGGTATGGTACGA
CGCTTAACGCTTTCGAGAAGCTCAGCCTCACTGCGGAATAAACAGCCTAC
TATTTAGCCCGGGAACGCGGAGATATGTGGAGAGTCGGTGCTAACGTAGT
GGTTTCTTGGCTTCTTTTTATCCGGACGGCATTTTTCACTCGCTCGCTAC
TTTTTGCCGCGCGCTATTAGCCTATTTCGGTTCAAGCTCCAGGGCGAAGT
TCGAGTGAGTTGGAGGGCGATGACCAGGCAACAGGACCCCAGGAAGGCCG
GGAGAGACATCGGAACGAAAATTCTGAGCACGCACCGAAAGAATGAAATG
CATCAACAACATCACAGTTTTTATTTTATGAGACGATGCAGCTGTAGACT
AAGACTATTCTTCCCTAAACGCATGCATCCTCGCTTCAGATCCTGAAAGG
AAACTTTCTGACTCCGGAACCTGGCTGGAAGTGCGTGTTGGCCTTCTTCG
CGTTCGATGACGACGTTCCCGGGAGCAATAGGTAGACACGGGTCATGCGC
GATAGCTCAGGCTTTGCTCTTCTTCTTGTGCGGGTGAAATAATGTCACCG
CTCAGGTTGTCCCCTGAGTAAGTAAGCATAAAGCGCGTATGCAGACTATG
TACGTACACGCCGAACAAGTACCGGGGGAAGCACGGTGTGTGGCTGCATA
AATCTTCGTCCACCTTTCTTGAGACTCCCGGCAGGTATTGAGCCATGACA
CCAGTCCATCGCGACATGAACAGGCTGAACTCCAAACCACGAGGTACAGG
TGCCCACTTTAGTGTAAAACACGGTTCTCTCTGGACGACAGGTACTACGT
CGAAGAGAAGGACGAGCCGCACCTCAGGACCCGAGTCGGCATGGAGGCCT
CCTGCCGGTGGGAGGCTAGACACACCTTCGCGGCCTTTGATGTGCCCGTG
CCGGGCTCGTGTGCCCTCGACGTGCACTACACCGTCCGAAGCACGGACAG
CCTCAACCCTTACCCGGAGCAATGCCGGATATCCTTGAAGGTATGCGAGC
GCTTTTCCAAGCGGGAAAGCATCTACGAAGTAGGTACCAGATGCCTGCCA
CAGACGCTCGGTAGTACCTCGTTCGCAATAGAGCGTAGATGCTGGAGTAG
GGGGAGAGGAGAAAGCGATGAAAAAATCAACAATGGGTGATGATGGAGGC
AGAGAATGGTTCCCGTTTCACTCCGTTTGCAACAATTGTTCACTTACTTG
TCGGGCCGCTTCACTCCGTAGCCGCCGAAGGGCGTGCCTGTGCTCTCCGC
GATTGTTTTAAGAAGAAAAACACCGTCGGAAGCAATACATGGACGCCTAG
TGGGAGTGAACTCAAATCGCTTGAGTTGAGAAAAACTCAACCCTTTCCTT
TCTAGGAAAACAAACGATCTTCACTTCACACCAGCTCTCCCGCCGCCGCC
TCCTCCCGAACCTTATAAATTGTTGTCCCAGGATCCATGGGGTGCGTGGG
AGCAAAAGTTCAGGTTTTACGCCTTTCCGGCAGAGCACGTCTTGCTTTCC
CCCGACCTCGAATGCTTCGACGCACAAGATAGTCTCAGCGGGTCATAG
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Coding sequence (CDS) from alignment at C-linearis_contig11:3663630..3669277+

>mRNA_C-linearis_contig11.1419.1 ID=mRNA_C-linearis_contig11.1419.1|Name=mRNA_C-linearis_contig11.1419.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3036bp|location=Sequence derived from alignment at C-linearis_contig11:3663630..3669277+ (Chordaria linearis ClinC8C monoicous)
ATGCAGCACGAGGACTCGAAAGGTTGTGTGTGGACGGAGGAGCAGGATGC
GGAGGGCTATGTGTACTACGTGAACGCCAATACACTGATGCAGCACGAGG
ACTCGAAAGGTTGTGTGTGGACGGAGGAGCAGGATGCGGAGGGCTATGTG
TACTACGTGAACGCCAATACACTGGAGACTGCATGGGAGTTGCCACCCTC
CGTTAGGGAGGCGGGATCGTCCGCGCTTGTGCCACTACAGGAGCCATCGC
CGAGTTGGACGGAAGTGTTTGACGACTCGACAAATAGCACGTATTTCTTC
AACACGTCTACTCAGGAGACTGCATGGGAGTTGCCACCCTCCGTTAGGGA
GGCGGGATCGTCCGCGCTTGTGCCACTACAGGAGCCATCGCCGAGTTGGA
CGGAAGTGTTTGACGACTCGACAAATAGCACGTATTTCTTCAACACGTCT
ACTCAGGAAAGTTCCTGGGACCTTGGAACGGATGATCGACTAGCTTCGGG
CATATACCATCCCTCGGATGGAGACGGAACCGCTGTGGGAGAGTACTACG
GCACCAGCCAAGAACAGGAGGGAGAGGAGAAAGTTCCTGGGACCTTGGAA
CGGATGATCGACTAGCTTCGGGCATATACCATCCCTCGGATGGAGACGGA
ACCGCTGTGGGAGAGTACTACGGCACCAGCCAAGAACAGGAGGGAGAGGA
GGCTCATGCTCCACACTCCGGGCCACCGACGTTGGTGCTGACTCCCCCAA
ATCAGGTTTTGAAGGATTTCCAAGTACCGCAAGAGGTGTCGGAGGCAGTC
GGAAGGGCCGGATCGGCGCACACTTGGCCGAAGACGTTGGACGGGCGACC
CTCACGGCTAGAACGTTGGGATGTCCTGAAGGCAAGGCTCATGCTCCACA
CTCCGGGCCACCGACGTTGGTGCTGACTCCCCCAAATCAGGTTTTGAAGG
ATTTCCAAGTACCGCAAGAGGTGTCGGAGGCAGTCGGAAGGGCCGGATCG
GCGCACACTTGGCCGAAGACGTTGGACGGGCGACCCTCACGGCTAGAACG
TTGGGATGTCCTGAAGGCAAATCCTTACCGCGAGCACCTTGCCACCGGAG
AGGCGTGGCGTTTGAGTCACCCGGAATTCGAGCCCAAGCTCTGCTTCTAC
GCCTTTGACACTGCTGTGGAGCACGTGGAGGCAAGTATCCTTACCGCGAG
CACCTTGCCACCGGAGAGGCGTGGCGTTTGAGTCACCCGGAATTCGAGCC
CAAGCTCTGCTTCTACGCCTTTGACACTGCTGTGGAGCACGTGGAGGCAA
GTAGGTACTGGGTGGAGGAAGCTGAAGCGCCCTTCCGGTGCCGACTGCAA
AAGGATGGGCTCAAGTTCTCCCGCGACATCTCAAAGTGGGAAGAACGAGC
CCCTGTTAGGCGGAAGAACAAGAAGGGCGGCGAAGAAGAAGGGGATAAGT
TCACTAGTGAGAACGAACGCTGTGGTCGTGGCAGTGACGGTGGCGGCAGC
AACGCTGGTGGCGGGCGGGGGACGGAATGCGAATGCGGGGGTGGTGCCAG
CTTCTTCGCGTTCCCTCTTGTGGTGCACAACTCCCACGCTCACCATGTGA
GGTACTGGGTGGAGGAAGCTGAAGCGCCCTTCCGGTGCCGACTGCAAAAG
GATGGGCTCAAGTTCTCCCGCGACATCTCAAAGTGGGAAGAACGAGCCCC
TGTTAGGCGGAAGAACAAGAAGGGCGGCGAAGAAGAAGGGGATAAGTTCA
CTAGTGAGAACGAACGCTGTGGTCGTGGCAGTGACGGTGGCGGCAGCAAC
GCTGGTGGCGGGCGGGGGACGGAATGCGAATGCGGGGGTGGTGCCAGCTT
CTTCGCGTTCCCTCTTGTGGTGCACAACTCCCACGCTCACCATGTGGACT
GGACTTCGGGCCCCGACCGCTACCAGATAACGCAGGGGAGGGAGCCGGAA
TGGGGCTGGACTCGGCTCTTCACTTTCTTCGCCTACGCCGCTTCCAAGTA
CCACGTGTTAGAGACCACGGATGTCCCGCTGGCGCAGAAGGCAAGCGAGA
GCTTTTATGACTGGACTTCGGGCCCCGACCGCTACCAGATAACGCAGGGG
AGGGAGCCGGAATGGGGCTGGACTCGGCTCTTCACTTTCTTCGCCTACGC
CGCTTCCAAGTACCACGTGTTAGAGACCACGGATGTCCCGCTGGCGCAGA
AGGCAAGCGAGAGCTTTTATATCCTGAAAGGAAACTTTCTGACTCCGGAA
CCTGGCTGGAAGTGCGTGTTGGCCTTCTTCGCGTTCGATGACGACGTTCC
CGGGAGCAATAGATCCTGAAAGGAAACTTTCTGACTCCGGAACCTGGCTG
GAAGTGCGTGTTGGCCTTCTTCGCGTTCGATGACGACGTTCCCGGGAGCA
ATAGGTACTACGTCGAAGAGAAGGACGAGCCGCACCTCAGGACCCGAGTC
GGCATGGAGGCCTCCTGCCGGTGGGAGGCTAGACACACCTTCGCGGCCTT
TGATGTGCCCGTGCCGGGCTCGTGTGCCCTCGACGTGCACTACACCGTCC
GAAGCACGGACAGCCTCAACCCTTACCCGGAGCAATGCCGGATATCCTTG
AAGGTACTACGTCGAAGAGAAGGACGAGCCGCACCTCAGGACCCGAGTCG
GCATGGAGGCCTCCTGCCGGTGGGAGGCTAGACACACCTTCGCGGCCTTT
GATGTGCCCGTGCCGGGCTCGTGTGCCCTCGACGTGCACTACACCGTCCG
AAGCACGGACAGCCTCAACCCTTACCCGGAGCAATGCCGGATATCCTTGA
AGGATCCATGGGGTGCGTGGGAGCAAAAGTTCAGGTTTTACGCCTTTCCG
GCAGAGCACGTCTTGCTTTCCCCCGACCTCGAATGCTTCGACGCACAAGA
TAGTCTCAGCGGGTCATAGGATCCATGGGGTGCGTGGGAGCAAAAGTTCA
GGTTTTACGCCTTTCCGGCAGAGCACGTCTTGCTTTCCCCCGACCTCGAA
TGCTTCGACGCACAAGATAGTCTCAGCGGGTCATAG
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