mRNA_C-linearis_contig11.1384.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1384.1 vs. uniprot
Match: A0A7S2SK93_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SK93_9STRA) HSP 1 Score: 273 bits (697), Expect = 6.450e-81 Identity = 168/368 (45.65%), Postives = 199/368 (54.08%), Query Frame = 3
Query: 243 YMGFTGVVGHEFVGVVEKIEXXXXXXXXXXXQGQSTSSASFLGKRVVGEINLAC---THCRVCERGGDRARNHCPERTVLGILGKHGTYADYLTLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPDAN-AAVLGDGKLGLLVAEVLARRGTGAAPTAXXXXXXXXXXXXXXXXXXXXGEDVAIERVGXXXXXXXXXXXXTLIGRHKEKMDMCCGGCPGTAAAGPGEGGGVCSSGGAQPPLIRVHAREDQARL-AGTFDVVVDATGSPHGLAAASELCRPLGTVVLKSTCAAGAGFNPAPVVINEQRIVGSRCGPFDAALRLLAEPGGGIDVERYVSGVFPLEEAAAAVECARQKGALKVQI 1331
YMGF GV+GHEFVG+ E + +GKRVVG+INLAC C C GG RARNHCP RTVLGIL K GTYA YLTLP NLHVVP++VS A A F EPLAAACRIVEQGL+ P + AVLGDGKLGLL+AEV+ R G A + L GRH EKM + +Q + VH+ ED G +DVV+DATGSP GL A +LCRPLGT+VLKSTCAAG FN AP VI+E R++GSRCGPF AL LL G+D+ + ++ FP E+ A+ A KG LKVQ+
Sbjct: 62 YMGFAGVLGHEFVGLCETAPP---------------DAQDLVGKRVVGDINLACGKVATCHTCGCGGVRARNHCPNRTVLGILNKDGTYAQYLTLPVTNLHVVPESVSTANAAFVEPLAAACRIVEQGLIDPTTDRVAVLGDGKLGLLIAEVVGRHVHGGASSTEEPSSPCT----------------------------------VLFGRHPEKMALV-----------------------SQEAHVAVHSSEDALPTHGGQYDVVIDATGSPQGLDLAQKLCRPLGTLVLKSTCAAGTDFNTAPFVIDELRVIGSRCGPFPEALALLES---GLDLTKLITASFPFEQVDEALRKAASKGCLKVQL 354
BLAST of mRNA_C-linearis_contig11.1384.1 vs. uniprot
Match: A0A7S0Q5J9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5J9_9EUKA) HSP 1 Score: 270 bits (690), Expect = 6.540e-80 Identity = 169/370 (45.68%), Postives = 200/370 (54.05%), Query Frame = 3
Query: 243 YMGFTGVVGHEFVGVVEKIEXXXXXXXXXXXQGQSTSSASFLGKRVVGEINLACTH---CRVCERGGDRARNHCPERTVLGILGKHGTYADYLTLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPDANAAVLGDGKLGLLVAEVLARRGTGAAPTAXXXXXXXXXXXXXXXXXXXXGEDVAIERVGXXXXXXXXXXXXTLIGRHKEKMDMCCGGCPGTAAAGPGEGGGVCSSGGAQPPLIRVHAREDQARLAGTFDVVVDATGSPHGLAAASELCRPLGTVVLKSTCAAGAGFNPAPVVINEQRIVGSRCGPFDAALRLLAEPGGGIDVERYVSGVFPLEEAAAAVECARQKGALKVQIICSQ 1343
YMGF+G+VGHEFVG+ E +GKRVVGEINLAC C C GG RARNHCP RTVLGIL K GTYA YLTLP RNLHVVPD+V+ A FAEPLAAA RIVEQGLV AV+GDGKLGLL++EVL R A L GRH KM + SSG + V+A + A FD+VVDATGSP GL + E+CRP+GTVVLKSTCAA FN AP VI+E R++GSRCGPF AL+LLAE G+D+ V+ FPL EA A+ A +KG +K+Q++ S+
Sbjct: 70 YMGFSGIVGHEFVGICETAP---------------AGHTHLIGKRVVGEINLACADLATCSTCACGGARARNHCPTRTVLGILRKDGTYAQYLTLPARNLHVVPDSVTTENAAFAEPLAAAFRIVEQGLVRATDRVAVIGDGKLGLLISEVLGRHAAAAG-----------------------------------------GPRPVLFGRHDSKMRL-------------------LSSGANVDTELSVNALPENAAA---FDLVVDATGSPAGLDLSREICRPMGTVVLKSTCAASKDFNTAPFVIDELRVMGSRCGPFKPALQLLAE---GLDLTPLVTKRFPLSEATDAIREAGKKGCMKIQLVISE 358
BLAST of mRNA_C-linearis_contig11.1384.1 vs. uniprot
Match: A0A1E7FAK7_9STRA (GroES-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAK7_9STRA) HSP 1 Score: 270 bits (690), Expect = 8.370e-80 Identity = 183/408 (44.85%), Postives = 221/408 (54.17%), Query Frame = 3
Query: 243 YMGFTGVVGHEFVGVVEKIEXXXXXXXXXXXQGQSTSSASFLGKRVVGEINLACTHCRVCER-GGDR---------ARNHCPERTVLGILGKHGTYADYLTLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLV---PPDANAAVLGDGKLGLLVAEVLARRGTGAAPTAXXXXXXXXXXXXXXXXXXXXGEDVAIERVGXXXXXXXXXXXXTLIGRHKEKMDMCCGGCPGTAAAGPGEGGGV-CSSGGAQPPLIRVHAREDQ-------ARLAGTFDVVVDATGSPHGLAAASELCRPLGTVVLKSTCAAGAGFNPAPVVINEQRIVGSRCGPFDAALRLLAEP------GGGID-------------VERYVSGVFPLEEAAAAVECARQKGALKVQIICSQA 1346
YMGFTGV+GHEFVGVVE+I + +L KRV G+IN+ C+ C VC DR +RNHCP R+VLGIL ++GT A+YLTLP NLH VP +VSD AVFAEPLAAACRIVEQGLV PPD A+LGDGKLGL++AEVL R + R+G L G+HK K+D+ E GV C S V +D+ A AG FDVVVDATGSP GL+ AS LCRP+GT+VLKSTCAAG FN AP VI+E R+VGSRCGP D AL LLA G G D V +Y++ FPL EA AA++CA +K +KVQIIC+++
Sbjct: 29 YMGFTGVLGHEFVGVVEEINTD-----------DESIKEKWLNKRVCGDINVGCSSCNVCLNFPHDRNVKGNCPMMSRNHCPTRSVLGILNRNGTIAEYLTLPVSNLHEVPSHVSDEVAVFAEPLAAACRIVEQGLVRVIPPD-KVAILGDGKLGLMIAEVLGREHS--------------------------------TRLGCSKYPKPI-----LFGKHKHKLDLV------------RESAGVDCRS---------VSDCKDEKAFNGVSAEYAGQFDVVVDATGSPAGLSLASGLCRPMGTLVLKSTCAAGEKFNAAPFVIDELRVVGSRCGPIDKALDLLAITNDNKIDGSGNDSSNNKKANIRPLNVVKYITRTFPLSEAVAAIKCAAEKSTMKVQIICNES 366
BLAST of mRNA_C-linearis_contig11.1384.1 vs. uniprot
Match: A0A0M0JNU1_9EUKA (L-threonine 3-dehydrogenase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JNU1_9EUKA) HSP 1 Score: 268 bits (686), Expect = 1.620e-79 Identity = 174/366 (47.54%), Postives = 199/366 (54.37%), Query Frame = 3
Query: 243 YMGFTGVVGHEFVGVVEKIEXXXXXXXXXXXQGQSTSSASFLGKRVVGEINLACTH---CRVCERGGDRARNHCPERTVLGILGKHGTYADYLTLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPDANAAVLGDGKLGLLVAEVLARRGTGAAPTAXXXXXXXXXXXXXXXXXXXXGEDVAIERVGXXXXXXXXXXXXTLIGRHKEKMDMCCGGCPGTAAAGPGEGGGVCSSGGAQPPLIRVHAREDQARLAGTFDVVVDATGSPHGLAAASELCRPLGTVVLKSTCAAGAGFNPAPVVINEQRIVGSRCGPFDAALRLLAEPGGGIDVERYVSGVFPLEEAAAAVECARQKGALKVQI 1331
YMGF GVVGHEFVG+VE + GKRVVG+INL C + C C G DRARNHCP RTVLGIL K GTY + +TLP +NLHVVPD+VS A FAEPLAAA RIVEQ LV P AV+GDGKLG+L+AEVL R A G V +GRH EKM + AA P GV SG A +FDVVVDATGSP GL A LCRPLGT+VLKSTCAAGA FN AP V++E +I+GSRCGPF AL LLA G+D+ ++ FPL EA+AAV A KG +KVQI
Sbjct: 49 YMGFAGVVGHEFVGIVESAP---------------AGYEALHGKRVVGDINLVCGNVESCFTCACGWDRARNHCPVRTVLGILNKDGTYQERITLPAKNLHVVPDHVSSENAAFAEPLAAAFRIVEQKLVAPTDKVAVVGDGKLGVLIAEVLGRAQVAAG-----------------------GPRVVF------------------VGRHPEKMAL----VSAAAAVEPVASDGVLPSG------------------ASSFDVVVDATGSPAGLDLARALCRPLGTLVLKSTCAAGANFNTAPFVVDELKIIGSRCGPFPPALELLAS---GLDLTPLITATFPLTEASAAVAKAATKGTMKVQI 333
BLAST of mRNA_C-linearis_contig11.1384.1 vs. uniprot
Match: A0A1Z5KM79_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM79_FISSO) HSP 1 Score: 269 bits (687), Expect = 2.500e-79 Identity = 169/389 (43.44%), Postives = 216/389 (55.53%), Query Frame = 3
Query: 243 YMGFTGVVGHEFVGVVEKIEXXXXXXXXXXXQGQSTSSASFLGKRVVGEINLACTHCRVCERGGDR-----ARNHCPERTVLGILGKHGTYADYLTLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLV----PPDANAAVLGDGKLGLLVAEVLARRGTGAAPTAXXXXXXXXXXXXXXXXXXXXGEDVAIERVGXXXXXXXXXXXXTLIGRHKEKMDMCCGGCPGTAAAGPGEGGGVCSSGGAQPPLIRVHAREDQA------RLAGTFDVVVDATGSPHGLAAASELCRPLGTVVLKSTCAAGAG--FNPAPVVINEQRIVGSRCGPFDAALRLLAEPGG-----GIDVERYVSGVFPLEEAAAAVECARQKGALKVQIICSQ 1343
YMGFTGV+GHEFVG+VE++ + A ++GKRV G+IN+ C C VC++ D +RNHCP R+VLGILG++G+ A+YLTLP RNLH VPD++ D AVF+EPLAAACRIVEQGLV PPD A+LGDGKLGL++AEVL R T ERVG L G+H+ K+ + S G LI+ ++ A AG FDVVVDATGSP LA ++ LCRP+GT+VLKSTCA+ FN AP VI+E ++VGSRCGP D AL LLA P ++V +Y++ FPL A A+ CA K +KVQIIC++
Sbjct: 53 YMGFTGVLGHEFVGIVEEVH--------------DSKDADWIGKRVCGDINVGCAACGVCDKQYDHRCSQMSRNHCPNRSVLGILGRNGSMAEYLTLPVRNLHPVPDDMPDEVAVFSEPLAAACRIVEQGLVSYNDPPD-KVAILGDGKLGLMIAEVLGREHT--------------------------------ERVGNALDAP------VLFGKHEHKLQL-------------------VSDAGVITKLIK-ECQDSSAFNGVSPAYAGKFDVVVDATGSPDALALSAALCRPMGTLVLKSTCASTPEKPFNSAPFVIDELKVVGSRCGPIDRALALLAIPDSDPNRRSLNVAKYITKSFPLSRADEAIRCAAAKSTMKVQIICNE 368
BLAST of mRNA_C-linearis_contig11.1384.1 vs. uniprot
Match: A0A7S1AD40_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AD40_NOCSC) HSP 1 Score: 268 bits (684), Expect = 4.590e-79 Identity = 166/376 (44.15%), Postives = 210/376 (55.85%), Query Frame = 3
Query: 249 GFTGVVGHEFVGVVEKIEXXXXXXXXXXXQGQSTSSASFLGKRVVGEINLACTHCRVCERGGDRARNHCPERTVLGILGKHGTYADYLTLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPDANAAVLGDGKLGLLVAEVLARRGTGAAPTAXXXXXXXXXXXXXXXXXXXXGEDVAIERVGXXXXXXXXXXXXTLIGRHKEKMDMCCGGCPGTAAAGPGEGGGVCSSGGAQPPLIRVHAREDQARLAGTFDVVVDATGSPHGLAAASELCRPLGTVVLKSTCAAGAGFNPAPVVINEQRIVGSRCGPFDAALRLLAEPGGGIDVERYVSGVFPLEEAAAAVECARQKGALKVQIICSQAVGNGE*ASSG 1376
GFTG++GHEFVG V ++S+ +GKRV GE+N++C C +C RGG ARNHC R+VLGIL GTYA++LTLP NLHVVPD +S+ AAVF EPLAAA R+VEQGLV P+ V GDGKLGLLVAEVLAR+G P L+GRH +KM + A+ P E + A LAG+FDVVV+ATG+P GL +A+ L P+GTVVLKSTCA+ A + +P+V+ E ++VGSRCGPF A+ LL G +DV++YVS VFPLE A A+E A +G LKVQ+ AV + E AS G
Sbjct: 60 GFTGILGHEFVGEVVV----------------ASSAPEIVGKRVCGELNVSCNSCGICSRGGSLARNHCLRRSVLGILNHDGTYAEFLTLPVSNLHVVPDGISNEAAVFVEPLAAAFRVVEQGLVQPEHRVCVQGDGKLGLLVAEVLARQGLSPKPV--------------------------------------------LLGRHADKMALLGDLVQAREASSPEESDSLV------------------AELAGSFDVVVEATGTPLGLTSAASLVLPMGTVVLKSTCASPATIDTSPLVVRELKVVGSRCGPFPEAVTLLNS--GDLDVQKYVSAVFPLENADKALEMAGTRGCLKVQL----AVASSEMASVG 351
BLAST of mRNA_C-linearis_contig11.1384.1 vs. uniprot
Match: A0A7S1Y2C0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2C0_9STRA) HSP 1 Score: 266 bits (681), Expect = 5.310e-78 Identity = 169/390 (43.33%), Postives = 212/390 (54.36%), Query Frame = 3
Query: 243 YMGFTGVVGHEFVGVVEKIEXXXXXXXXXXXQGQSTSSASFLGKRVVGEINLACTHCRVCERGGDR-----ARNHCPERTVLGILGKHGTYADYLTLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPDAN--AAVLGDGKLGLLVAEVLAR-----RGTGAAPTAXXXXXXXXXXXXXXXXXXXXGEDVAIERVGXXXXXXXXXXXXTLIGRHKEKMDMCCGGCPGTAAAGPGEGGGV-------CSSGGAQPPLIRVHAREDQARLAGTFDVVVDATGSPHGLAAASELCRPLGTVVLKSTCAAGAGFNPAPVVINEQRIVGSRCGPFDAALRLLA--EPGGGID---VERYVSGVFPLEEAAAAVECARQKGALKVQIICS 1340
YMGF G++GHEFVG V I G + ++ KRV G+IN+ C CRVC+ D +RNHCP RTVLGIL ++GT A+YLTLP +NLH+VPD++SD AVF+EPLAAACRIVEQGLV +++ A+LGDGKLGL++AEV+ R +GT AP L G+H K+ + E GV C A + HA +DVVVDATG+P L A+ LCRP+GTVVLKSTCAAG FN AP VI+E R++GSRCGP D AL LLA E GI V++YV+ FPL +A AVECA ++ +KVQIICS
Sbjct: 85 YMGFQGILGHEFVGKVVDIRT-----------GDDSLKTKYMNKRVCGDINVGCFSCRVCQGSRDSCCSQMSRNHCPNRTVLGILNRNGTMAEYLTLPVQNLHLVPDHISDEDAVFSEPLAAACRIVEQGLVSIESSDKVAILGDGKLGLMIAEVMGREYLSVKGTAEAPEPPI-----------------------------------------LFGKHDHKLKLV-------------ENSGVITKMVSDCQDDSAFNGVAAAHAA--------AYDVVVDATGNPAALLLAAGLCRPMGTVVLKSTCAAGEQFNAAPFVIDELRVIGSRCGPIDKALELLALQEDDAGIPSLRVQKYVTKTFPLSQAKEAVECAAKRETMKVQIICS 401
BLAST of mRNA_C-linearis_contig11.1384.1 vs. uniprot
Match: A0A7S1D6F2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6F2_CYCTE) HSP 1 Score: 263 bits (672), Expect = 6.480e-77 Identity = 168/393 (42.75%), Postives = 213/393 (54.20%), Query Frame = 3
Query: 243 YMGFTGVVGHEFVGVVEKIEXXXXXXXXXXXQGQSTSSASFLGKRVVGEINLACTHCRVC-------ERGGDRARNHCPERTVLGILGKHGTYADYLTLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPDAN----AAVLGDGKLGLLVAEVLARRGTGAAPTAXXXXXXXXXXXXXXXXXXXXGEDVAIERVGXXXXXXXXXXXXTLIGRHKEKMDMCCGGCPGTAAAGPGEGGGVCSSGGAQPPLIRVHAREDQARLAGT-------FDVVVDATGSPHGLAAASELCRPLGTVVLKSTCAAGAGFNPAPVVINEQRIVGSRCGPFDAALRLLAEPGGGID--------VERYVSGVFPLEEAAAAVECARQKGALKVQIICSQ 1343
YMGF GV+GHEFVGVVE+++ G ++GKRV G+IN+ C C VC ER +RNHCP RTVLGIL ++GT A+YLTLP NLHVVPD+V D AVFAEPLAAACRI EQ LV +A A+LGDGKLGL++AEVL R T TA D + L G+H+ K+D+ + G VC V +D+ G +DVVVDATGSP GL+ A+ LCRP+GT+VLKSTCAAG FN AP VI+E ++VGSRCGP + AL LLA D V +Y++ FPL +A A+ CA++K +KVQI+C++
Sbjct: 58 YMGFHGVLGHEFVGVVEEVD------------GDEALQKEWVGKRVCGDINVGCADCSVCFNAERLDERCCKMSRNHCPNRTVLGILKRNGTMAEYLTLPVSNLHVVPDDVPDEEAVFAEPLAAACRIPEQNLVYYNAQRPDKVAILGDGKLGLMIAEVLGREHTKHFATA--------------------ANDAS----------PPPPPRPVLFGKHQHKLDLV------------KDSGVVCK---------HVSECKDEKAFNGVAAGHAAQYDVVVDATGSPAGLSLAAGLCRPMGTLVLKSTCAAGEQFNAAPFVIDELKVVGSRCGPIEKALELLAVRNPEADHVGTEPLRVTKYITQTFPLNKADEAILCAKEKSTMKVQIVCNE 387
BLAST of mRNA_C-linearis_contig11.1384.1 vs. uniprot
Match: A0A7S4EL10_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EL10_9STRA) HSP 1 Score: 263 bits (673), Expect = 4.200e-76 Identity = 196/412 (47.57%), Postives = 236/412 (57.28%), Query Frame = 3
Query: 243 YMGFTGVVGHEFVGVVEKIEXXXXXXXXXXXQGQSTSSASFLGKRVVGEINLACTHCRVCER--------GG--DRARNHCPERTVLGILGKHGTYADYLTLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLV---------PPDANAAVLGDGKLGLLVAEVLARRGTGAAPTAXXXXXXXXXXXXXXXXXXXXGEDVAIERVGXXXXXXXXXXXX-TLIGRHKEKMDMCCGGCPGTAAAGPGEGGGVCSSGGAQPPLIRVHAREDQARLAGT-------FDVVVDATGSPHGLAAASELCRPLGTVVLKSTCAAGA-GFNPAPVVINEQRIVGSRCGPFDAALRLLAEPGGGI------------------DVERYVSGVFPLEEAAAAVECARQKGALKVQIICS 1340
YMGFTG++GHEFVGVV ++ ++GKRV G+IN+ C C VC GG +RNHCP RTVLGIL KHGT A++LTLP NLH VPD+VSD AVFAEPLAAACRIVEQ LV PPD A+LGDGKLGL++AEVL R T XXXXXXXXXXXXXXXXXXXX + XX L G+H K+D+ E GV P++ D +R +G +DVVVDATGSP GL A+ +CRP+GT+VLKSTCAAG GFN AP+VI+E R+VGSRCGP D AL LLA P GI +VE+Y++ FPL E AA+ CA ++ +KVQI+CS
Sbjct: 81 YMGFTGILGHEFVGVVTEVNSETPEL-----------KERWMGKRVCGDINVGCASCWVCANAPHDRNCAGGCPQMSRNHCPYRTVLGILNKHGTMAEFLTLPLHNLHEVPDHVSDEVAVFAEPLAAACRIVEQNLVRYKEDLGRVPPD-KVAILGDGKLGLMIAEVLGREHTLRLGKNXXXXXXXXXXXXXXXXXXXXXXXIXXXXXXXXDTINEDDSPRPVLFGKHSHKLDLV------------RETAGVDCK-----PVVDCI---DASRFSGVAAEHEHRYDVVVDATGSPAGLKLAAGMCRPMGTLVLKSTCAAGTDGFNAAPLVIDELRVVGSRCGPIDRALELLAIPNHGIGESVGDESSNNSCTIEPLNVEKYITKTFPLSEVEAAIRCAAERSTMKVQIVCS 460
BLAST of mRNA_C-linearis_contig11.1384.1 vs. uniprot
Match: A0A7S4EC03_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EC03_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.410e-74 Identity = 165/368 (44.84%), Postives = 193/368 (52.45%), Query Frame = 3
Query: 243 YMGFTGVVGHEFVGVVEKIEXXXXXXXXXXXQGQSTSSASFLGKRVVGEINLACTHCRVCERGGDRARNHCPERTVLGILGKHGTYADYLTLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPDANAAVLGDGKLGLLVAEVLARRGTGAAPTAXXXXXXXXXXXXXXXXXXXXGEDVAIERVGXXXXXXXXXXXXTLIGRHKEKMDMCCGGCPGTAAAGPGEGGGVCSSGGAQPPLIRVHAREDQA--RLAGTFDVVVDATGSPHGLAAASELCRPLGTVVLKSTCAAGAGFNPAPVVINEQRIVGSRCGPFDAALRLLAEPGGGIDVERYVSGVFPLEEAAAAVECARQKGALKVQIICS 1340
YMGF GVVGHEFVG+ E S +GKRVVGEINLAC C +CERGG RARNHCP+RTVLGIL K+GTY + LTLP RNLHVVPD V A FAEPLAAA R+VEQ LVP A++GDGKLGLL+ EVL R +R G L GRH KM + C + A D A + A +DVVVDATGSP GL + +LCR GT+VLKSTCAAG FN AP V++E R+ GSRCGPF AL LL +D+ + FPL +A AV+ A ++G LKVQI S
Sbjct: 70 YMGFEGVVGHEFVGLCESAPH---------------SHQHLVGKRVVGEINLACNTCMLCERGGPRARNHCPKRTVLGILNKNGTYQERLTLPARNLHVVPDCVKTENAAFAEPLAAAFRVVEQNLVPAKTKIAIVGDGKLGLLIGEVLGRHA---------------------------------QRTGSPRP--------VLYGRHVSKMKLL-------------SSESQCDT-----------ALSDTALPKNAYAYDVVVDATGSPAGLDLSRQLCRTEGTLVLKSTCAAGTDFNTAPFVVDELRVQGSRCGPFGPALELLKT----LDLTPLIDSTFPLAKAPEAVKRAGERGCLKVQIRVS 353 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1384.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1384.1 >prot_C-linearis_contig11.1384.1 ID=prot_C-linearis_contig11.1384.1|Name=mRNA_C-linearis_contig11.1384.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=435bp MARPGGRRWSGCSRPTKLCLFRNQEKLSCACCEPGCATPTSNCLLGELHAback to top mRNA from alignment at C-linearis_contig11:3365182..3370080+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1384.1 ID=mRNA_C-linearis_contig11.1384.1|Name=mRNA_C-linearis_contig11.1384.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4899bp|location=Sequence derived from alignment at C-linearis_contig11:3365182..3370080+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:3365182..3370080+ >mRNA_C-linearis_contig11.1384.1 ID=mRNA_C-linearis_contig11.1384.1|Name=mRNA_C-linearis_contig11.1384.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2610bp|location=Sequence derived from alignment at C-linearis_contig11:3365182..3370080+ (Chordaria linearis ClinC8C monoicous)back to top |