mRNA_C-linearis_contig11.1381.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig11.1381.1
Unique Name	mRNA_C-linearis_contig11.1381.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig11.1381.1 vs. uniprot
Match: A0A6H5KZW3_9PHAE (Omp85 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZW3_9PHAE)

HSP 1 Score: 507 bits (1305), Expect = 1.370e-166
Identity = 269/373 (72.12%), Postives = 309/373 (82.84%), Query Frame = 1

Query:  532 SAGDEGSSDGRDPLVLAGVGSGMGAALDGLKEAMRNLRMPWARKDSSGEEGQDGDGEASSESSVEQQLPEVLVADVVVDESVIPRDVLASAAVKSGLLGREASEARIQACAKILNQWYQYEGYILSGVSNAVISPNGTISFSVNEPVVSKLEPVQLLYYKPANIKDPASGLVQVEKGKTKAKTIARGLGLEGGEHFKVDADRWRGVLGSGLFNGAQLSGAHQNAADKGFTLDINVQERRSVVFEPGVTKTLFDSNWAGEICFEEKNVLGRNGMLGLDLRRSMASPFTSFSVRVGNNRFGQLGAWQASLFRDSISSASASGLGRG-TLGGGYANSSMGPAASAPVFSTASPRGVPRDIGLLARSISGAQHRRAV 1647
            SAGDEG  DG+ PLVLA  G  + A L+ +K+AMR ++MPW RKD S EEGQ+G  E +SE   E++L +VLVADVVVD S+IPRDVL SAAVKSGLLGREAS  RIQACA+IL++WYQYEG+ILSGV NA ISPNGT++FSVNEPVVS +EP+QL YYK A+I+DP SGLVQVEKGKTKA TIA+GLGL+GGEHFK+DA RWRGVLGSGLF+G QLSGAHQNA DKG TLDINV+ER SVVF PGVTKTLFDSNWAGEI FEE NVLGRNG++GL L RSM+SPFTSFS+R+GNNRFGQ G WQ S FRD +  A  SG  RG     GYAN+++GPA+SAP FSTASP GVPRD+ +LARSI GAQH R V
Sbjct:  165 SAGDEGFGDGQ-PLVLAAAGGSLAAFLNEVKDAMRQVKMPWDRKDKSSEEGQEGVAETASEEDPEKELSKVLVADVVVDNSIIPRDVLTSAAVKSGLLGREASVERIQACARILSEWYQYEGHILSGVVNAAISPNGTVAFSVNEPVVSGVEPIQLSYYKTADIRDPNSGLVQVEKGKTKASTIAKGLGLKGGEHFKLDAQRWRGVLGSGLFSGVQLSGAHQNAEDKGMTLDINVEERSSVVFAPGVTKTLFDSNWAGEISFEETNVLGRNGVMGLKLHRSMSSPFTSFSLRMGNNRFGQPGGWQLSFFRDCL--APYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGV 534

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BLAST of mRNA_C-linearis_contig11.1381.1 vs. uniprot
Match: D8LKK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKK3_ECTSI)

HSP 1 Score: 466 bits (1199), Expect = 3.620e-153
Identity = 244/340 (71.76%), Postives = 279/340 (82.06%), Query Frame = 1

Query:  631 MRNLRMPWARKDSSGEEGQDGDGEASSESSVEQQLPEVLVADVVVDESVIPRDVLASAAVKSGLLGREASEARIQACAKILNQWYQYEGYILSGVSNAVISPNGTISFSVNEPVVSKLEPVQLLYYKPANIKDPASGLVQVEKGKTKAKTIARGLGLEGGEHFKVDADRWRGVLGSGLFNGAQLSGAHQNAADKGFTLDINVQERRSVVFEPGVTKTLFDSNWAGEICFEEKNVLGRNGMLGLDLRRSMASPFTSFSVRVGNNRFGQLGAWQASLFRDSISSASASGLGRG-TLGGGYANSSMGPAASAPVFSTASPRGVPRDIGLLARSISGAQHRRAV 1647
            MR  +MPW RKD S  EGQ+G  E +SE   E++L +VLVADVVVD S+IPRDVLASAAVKSGLLGREAS  RIQACA+IL++WYQYEG+I SGV NA ISPNGT++FSVNEPVVS +EP+QL YYK A+I+DP SGL QVEKGK K     +GLGL+GG+HFK+DA RWRGVLGSGLF+G QLSGAHQNA DKG TLDINV+ER SVVF PGVTKTLFDSNWAGEI FEEKNVLGRNG++GL L RSM+SPFTSFS+R+GNNRFGQ G WQ S FRD +  A  SG  RG     GYAN+++GPA+SAP FSTASP GVPRD+ +LARSI GAQH R V
Sbjct:    1 MRQFKMPWDRKDKSSVEGQEGVAETASEEDPEKELSKVLVADVVVDNSIIPRDVLASAAVKSGLLGREASVERIQACARILSEWYQYEGHIFSGVVNAAISPNGTVAFSVNEPVVSGVEPIQLSYYKTADIRDPKSGLFQVEKGKIKVSPFPKGLGLKGGDHFKLDAQRWRGVLGSGLFSGVQLSGAHQNAEDKGMTLDINVEERNSVVFAPGVTKTLFDSNWAGEISFEEKNVLGRNGVMGLKLHRSMSSPFTSFSLRMGNNRFGQPGGWQLSFFRDCL--APYSGFARGGXXXXGYANNALGPASSAPDFSTASPAGVPRDLSMLARSIQGAQHGRGV 338

[Close]

BLAST of mRNA_C-linearis_contig11.1381.1 vs. uniprot
Match: A0A835Z3Q2_9STRA (Omp85 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Q2_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.300e-60
Identity = 127/304 (41.78%), Postives = 190/304 (62.50%), Query Frame = 1

Query:  724 EQQLPEVLVADVVVDES-VIPRDVLASAAVKSGLLGREASEARIQACAKILNQWYQYEGYILSGVSNAVISPNGTISFSVNEPVVSKLEPVQLLYYKPANIKDPASGLVQV--EKGKTKAKTIARGLGLEGGEHFKVDADRWRGVLGSGLFNGAQLSGAHQNAAD--KGFTLDINVQERRSVVFEPGVTKTLFDSNWAGEICFEEKNVLGRNGMLGLDLRRSMASPFTSFSVRVGNNRFGQLGAWQASLFRDSISSASASGLGRGTLGGGYANSSMGPAASAPVFSTASPRGVPRDIGLLARSI 1620
            E+ +P V+V DVVV+ + V+P++VL +A+V+SGLLG    + R+ AC +I+N WY  +GY+LS V+ A + PNG +   V EP+VS+ EP+ L++ +  N  DP S   QV   KGKT+A T++R LGL  G+  ++D  R+  +  S LF+   LSGA +   +  +  T+ + V ERRSVVFEPG+TKTLF++ WAGE+ FE++NV G N ++G++ RR + +  TS+ VR+GN+RFG+LGAW A+LFR+  S +        TLG                      +GV RD+ +L RS+
Sbjct:  129 EETVPTVVVQDVVVNGTQVLPKEVLNTASVESGLLGAPFDQKRLAACIRIINGWYNSQGYVLSTVAEASVFPNGAVVLQVQEPIVSQKEPISLVFIQKVNATDPESAYEQVPNNKGKTRACTVSRALGLRKGKPLQIDLKRFNSLRASPLFDVVALSGAKKAPGEDEQSATVVLMVSERRSVVFEPGITKTLFNAQWAGEVAFEDRNVAGLNYVVGVEARRGVGASHTSYRVRLGNDRFGRLGAWSAALFREPTSDSQPDHHSGQTLG----------------------QGVSRDVSMLYRSL 410

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig11.1381.1 vs. uniprot

BLAST of mRNA_C-linearis_contig11.1381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5KZW3_9PHAE	1.370e-166	72.12	Omp85 domain-containing protein n=1 Tax=Ectocarpus...	[more]
D8LKK3_ECTSI	3.620e-153	71.76	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835Z3Q2_9STRA	1.300e-60	41.78	Omp85 domain-containing protein n=1 Tax=Tribonema ...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig11	contig	C-linearis_contig11:3312093..3318783 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	110.2
Seed ortholog evalue	3.2e-21
Seed eggNOG ortholog	2850.Phatr46881
Hectar predicted targeting category	signal anchor
EggNOG OGs	2E7XX@1,2SEFZ@2759,2XCQY@2836
Ec32 ortholog description	Bacterial surface antigen (D15)
Ec32 ortholog	Ec-16_003280.1
Best tax level	Bacillariophyta
Best eggNOG OG	NA\|NA\|NA
Exons	11
Model size	1672
Cds size	1671
Stop	0
Start	1

Relationships

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig11.1381.1	prot_C-linearis_contig11.1381.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig11 3312093..3318783 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig11:3312093..3318783-
coding sequence from alignment at C-linearis_contig11:3312093..3318783-

protein sequence of mRNA_C-linearis_contig11.1381.1

>prot_C-linearis_contig11.1381.1 ID=prot_C-linearis_contig11.1381.1|Name=mRNA_C-linearis_contig11.1381.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=557bp
MPLCARLPRCLHPKLSSLFSPSVFMMARDRARLLVPLLFPLALAAVVLVG
VVDAFLPFSPASYNINVKLSQHVPAAASAPPGGKLRPVASERNSRPPAAG
SAMVIKPAKRARNSVPPSCSPAAARGRCSASSIRRVFCGAAGLLSLDDDD
GGDQGGGRGKGEGNGNGNGNGGDGDESSAGDEGSSDGRDPLVLAGVGSGM
GAALDGLKEAMRNLRMPWARKDSSGEEGQDGDGEASSESSVEQQLPEVLV
ADVVVDESVIPRDVLASAAVKSGLLGREASEARIQACAKILNQWYQYEGY
ILSGVSNAVISPNGTISFSVNEPVVSKLEPVQLLYYKPANIKDPASGLVQ
VEKGKTKAKTIARGLGLEGGEHFKVDADRWRGVLGSGLFNGAQLSGAHQN
AADKGFTLDINVQERRSVVFEPGVTKTLFDSNWAGEICFEEKNVLGRNGM
LGLDLRRSMASPFTSFSVRVGNNRFGQLGAWQASLFRDSISSASASGLGR
GTLGGGYANSSMGPAASAPVFSTASPRGVPRDIGLLARSISGAQHRRAVA
TADTASA

mRNA from alignment at C-linearis_contig11:3312093..3318783-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig11.1381.1 ID=mRNA_C-linearis_contig11.1381.1|Name=mRNA_C-linearis_contig11.1381.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6691bp|location=Sequence derived from alignment at C-linearis_contig11:3312093..3318783- (Chordaria linearis ClinC8C monoicous)
ATGCCCCTCTGTGCTCGGCTGCCTCGCTGCCTCCACCCAAAGCTCTCTTC
TCTGTTCTCTCCATCCGTGTTTATGATGGCCCGGGATCGGGCACGGTTGT
TAGTCCCCCTTCTGTTCCCGTTGGCGTTGGCGGCTGTGGTACTTGTCGGC
GTGGTGGACGCCTTCCTTCCGTTCAGCCCGGCATCCTACAACATCAACGT
CAAGCTCTCTCAACATGTTCCTGCTGCTGCTTCTGCTCCCCCGGGAGGCA
AGCTGCGGCCGGTGGCCAGCGAGCGTAACTCGCGACCTCCTGCGGCAGGT
AGTGCGATGGTGATTAAGCCAGCCAAGAGAGCCAGGAATTCTGTTCCACC
CAGCTGTAGCCCTGCTGCTGCCCGCGGTCGGTGTTCTGCCAGCAGCATAC
GCCGGGTGTTCTGCGGCGCTGCAGGACTGCTGTCGCTGGATGATGATGAT
GGTGGGGATCAGGGGGGAGGAAGAGGAAAGGGGGAAGGTAACGGCAATGG
CAATGGCAACGGCGGCGACGGTGACGAGTCGTCTGCTGGAGACGAAGGGT
CTAGCGATGGGCGAGATCCCTTAGTGCTCGCAGGCGTTGGCTCTGGGATG
GGAGCAGCCCTCGATGGGCTGAAGGAAGCGATGCGGAACCTTCGCATGCC
TTGGGCCCGGAAGGTGATTCGAAGGCAACTTGTTGATATCAGTGCCCGGT
GTGCCTAGTAGGTGTGCAGTTTTTGCAGCCTATGCTGTCCGCATGCGGTG
CTTCTCTGGCTGCTGTTGTTCGGGTGGTTGGGTCTGCTGCCGGAAATTCA
AAATTTGACGTGAAGGTCTTGCTACTTCTTGCATGTTTTTTCAGCTGTGT
TTCATTTAGTCCACGTACATATTTTCAGGCATATTTTCAAACAACGCGCA
GGCTTTCACTCTCAACTCCTAGAGAACCACTCAGCAGAGAATTTAGCATG
CCTCGTAAAAGCTGTGCATGTTTGATGTACATTAGCTTCCTTTTCGCCGA
CTTGGAGTACTCGCACCCGCACAATACCGCACGGTCGTATTTTTTTTCTC
GTTGATGCCCTACTCTTACTACTCTCTCCTCGCGCATGAACATCACTTGG
TGTCGGGGATGGCATGGAATGGCATGGCATGGCATGGCGATGGCGATGGC
GATGGCATTCAGGACTCATCTGGCGAGGAGGGGCAAGATGGTGACGGGGA
GGCGTCCTCCGAGAGCAGCGTGGAACAGCAGCTGCCCGAGGTTCACGATC
TTCCGTTTTCCTCGCTTCCTGCACCGTGTGCATAGAACAGCGTTGTTGCG
ATTGATCGATCGATGGTGTAGAACACAAAGTGTAGGCGGGCGTTCCTACT
CAACTTTTTTTGTCACCGCGCGGCACGCGTTGCACCGCGAGACGGCTATA
TGTGGCCGTACGTATTTTCTCGCCATCTTGTAAAATCTTGGCATGTGTCC
TAGGTCGTCCAACCAAACAACCAACTCAACACAAACCCGCTTGCATTCGA
GTGGTCTCCCTGACCAAACACGATGGCCGTCCCAGAATATACAACTAATA
ATTTCAAACACGATCAACGGGTACGATCAGGTGCTGGTGGCCGACGTTGT
GGTGGACGAGAGCGTCATCCCCAGGGACGTGCTAGCTTCCGCCGCCGTCA
AGAGCGGCCTCCTTGGACGGGAGGTGAGCAACTTGTCGTTGCTGTTGTTG
TTGTTGTGGTTGTTGGCAGTGGCAGGGGCAGTGGTGCTGGGTGCTTTGAT
TCCGTTCGATCGTGGTTGGATGTTTTGCCACGTCTGCCGTTTTGTTGCCG
CGACCGGTGCTGCTGTTGATACTGTGCCGATACTGCTGTTTTCGCTATGT
ATCGACCAAACGTCCATACATACCCGTAGTGCGACGTTCTGTAGAACCTC
GTCCCACGCGGCGGCATTATGAGGTTCATCGCCTGTCGCTATCAGCGCAA
ACGTCCGTATTTCCCTTGCTGTACGCTTGAAAGGTTAAAGGTTGGTATTT
TTCCGCTCGCACCCGAAATCTCACCCACACCAAAGTCAATGCCCGCTAAG
CGAGATGCTGTCCCACCGTCCGTCGCCTGTGTGTATGTGGATTGGCACAC
GTGCGTGTTCGCTCTCTCTCCCAGTCAGACCTGCTCGCTGTTTCGGTTTC
ACAACCAGCCATCTTTTGCGCCTTTCGGGCCTGCTGCATGCTTTTGTAAC
GGTGGGCTTTTGCTCCATGTCTTCTTTCTTCCGGACGCATGCTTCGTGTG
TCGAACCGGTCCAGGCTTCCGAGGCGCGGATACAGGCGTGCGCGAAGATC
CTGAACCAGTGGTACCAGTACGAAGGATACATCCTCTCGGGCGTTTCGAA
CGCTGTTATCTCACCCAACGGTGCGTCGTCGGAGTGACGTGATGCAGTAC
CTGTCTCGTTGCTTGCGTTTCCTAATGGTTTCTGTCCTGCGTTGATGCCT
GTTCGTGCCGTGTGTGTGTGTGTATTATCTCCCCATGGTGTCTGTCGCCG
TAGTGCTGTACAACACAGGTCCGTCATCGCAGAACGTTTGTACACGTGTT
TCCCTTTGTTTCCAGTGTTGGTACACGAAGCAGAAGTAGAAGCATAGCAC
ACTCCTGCCGCATTTTGGCCCGCCACAACAGTTGTGAGGGCCGCGAGACA
GACACGAACGCTCACCCCGCCGCTCGTTCGTTTTGTAAGATATTTTAGCA
ACGAAATGGAACGCCCGTTCGTTCATCAGCACCACCGCGCCGTGCAAACG
CCGCCGTGGAGTACAGTGCAGTAGTCGCAAACCCGTTGTTTCGGATGACG
GAACCTGAAATCCCAGCTGGCCCGCCGGACACACGCCAGTCCCCACTATG
TTTGGTGCGTGTGTGTGTGTGTTTGTGCTGTGCTGTGCTGTGCTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTGTGTTGCAACACTCAGC
ATCGTGTGGTTTGACCGTGCGGATGCTTCCCTCTCCTCCAGGAACCATCT
CGTTCAGCGTCAACGAGCCTGTCGTGTCGAAGCTCGAGCCCGTACAGCTT
CTCTACTACAAGGTGACTTGGAGGGGATAGTGCCATGAACGCGCCTGGTC
GCCCATAGTTCAGACATACGGAGCACTGCCCTACAAAAAGCGGTAGGTAA
CCGAAGAAAGCGGGTCCATGTCTGTTGCTTGCGCACACGCGTCTGCGTTG
TGGATGCCTTCCCCAGCGTCCATTCCAAGGACTTTGCTTGATCTACTGCC
GTACAGAAAAACTGCACTCTATTTTTTCAGATGCTTGCACTCGCTCGCTC
TTCGGTGTTTTCCGATACTTTATGGGCGCATGCATCGCTAGTATCCTCCT
TATCCTTTGCCCTTCCCTCCGAATTTGCTTTGCTTGCGCAACTCCTCGTG
CGGCGGGCGCGTCCTCCCTCTCCGTGCTTTGCGTGTGTGTTGCACCCATC
AAATGGTATGGTAATGGTAAATGGTAATGGTAATGCCAATGGTATGGTAA
TGGTAACATACAGCCGGCCAATATCAAGGACCCGGCGAGCGGGCTGGTCC
AAGTTGAGAAAGGAAAAACCAAGGCCAAGACCATCGCGAGGGGCCTGGGT
TTGGAGGTAAATTACTGCTGTACGTCCTCGCCCCCCGTCACCCCACACCA
CTCACCCCATCCTCCACACGCACGCTGCGTCTCCACCTCCTCGATTAACG
GTGGTTGGGAAAGCCCTGCCGTGGCTTGTCTGCTCGCAAACCCGTTGGTT
GAAGTATCCTTACGCCTCGCAGCGCGCAGTGGGCCCATGGCGGTAGTAGT
CACTACAATACCGGTAGATATGGGGCGTCCGTGTCGGGTGGCCTTTTCTC
TGCGATGGTGGCAAAATATGCAGCTTTACAGCTCGATCGTGTGTGTAGCA
GACAGCATCTTGTTGGTGTTGTGCGAGTGCATCTCCGACTCTTCCGCGTG
CTTGTGTTTTGCGCTTCTTGTTTTGTTTTGTTTTGTTTTGTTCCGCTTCA
TCACCACTCACCACTCATCGCTCGTCACTCATCACTAAATGTGCGCCGGG
CGCGTGTATGTGTTTTGTGTGTTGTGTATTGTCTGCTTCCGTCTTGCGGT
TTGGCCATGCCGCACCATGCCATGTGATGCGATGTCGTCGTTTCCGCTCA
CCAGGGCGGAGAGCATTTCAAGGTCGATGCTGACAGGTGGAGGGGCGTGC
TCGGATCCGGCCTGTTCAACGGGGCGCAGCTGTCCGGTACGTGTACAGCC
TCGCGGTCGCAACCGAAAACGTGCACCGTCCAATCCGTGCGAAACAGAGC
CGATCGATCGATCACGGCACTCTTTTGCTGGTATATACCCACGTCCGTCC
GTCCGTCCCGGGCCCGCAGCACTGCCACTGCCCACCGGATAGTTGTGGCG
CTGCCCGCAGATCGCGCACTCGTCAAGCAACCTGCTGCTCTTGCGATGTT
TTGCTGTTTTTGCTGCGGTCTCACCTCACCGCGCCGTGATTGGTTTGCTG
TCGTCACGATAGTTGATCCTACTTCTGTGCCGTCTGCGGGTTTTTGTTTC
TGTTTGGGTGTCGCGGGGCCCCGTGTCTTGGTGTTGGCAAAATTTAATTT
AGGCGCCCATCAGAATGCGGCGGACAAGGGTTTCACCCTGGACATCAACG
TGCAGGAGAGGAGGTCCGTCGTGTTCGAGCCGGGGGTGACCAAGACGCTG
TTCGACAGCAACTGGGCCGGCGAGGTGCGGGCGTGTTGTTGCTGTTGCTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTCTCGTTTCTTGCTGGTGC
CTGCCGTGCTCGTCCCAACCAACAGTCGACCAATAAGCAGTCAACGGCTT
TCCGTGGCTTGTACATACACGGTTCTCGTTAGGGGTCATTCTTAACACAC
AGAGTTGCAATTCGTACCGTGCTTCGCTTTCGTCCTTTTCTTGATGCGCC
AGATTTGCTTCGAGGAGAAGAACGTCCTGGGTCGCAATGGCATGCTGGGC
TTAGACCTTCGCCGCTCCATGGCGTCCCCCTTCACCAGCTTCAGGTGCAG
ATGGTGATGATGATGCTGCTGCTGCTCCTACCGCTGCGGCGGTTTGTGTG
CACGTGCCAGTTGAACTCGGGAGTGGTTTGTTTTTCATGTATGGTAGCCG
ACCTTCACGATGTCGATGTAGGAGGGTGCCGCGTCCGGCAGGATTTTTCG
CCGTGCCTGCTGTTGCTGCTGTTGCTGTTGCTGTTGCTGTTGCTGCTGTT
GCTGCTGCTGCTGCTGCTGCTGCAATGGCTGTTGTTCGTTCTCACCGCTC
TTTCGCTTTGCTTGTTGCCTGTCCTCTGCTCTGCTCTGCCTGCTCTGCCT
GCCTGCCTGCCTGCCTGCCTGCCTGCCTGTCCGTCTTCCTCTTCTCTCCA
CCGATCGGTGTCTCTCCCTCTTCCCACAAAAAATAGCGTTCGCGTGGGCA
ACAACCGCTTCGGGCAGCTGGGGGCGTGGCAAGCCTCCCTTTTCCGGGAC
TCCATCTCCTCCGCCAGCGCCTCGGGCCTCGGGCGCGGCACCCTCGGAGG
GGGTTACGCCAACAGCTCCATGGGGCCGGCAGCATCCGCACCCGTCTTCT
CCACCGCATCTCCGAGAGGCGTACCCAGGTACCGTGCAGTGCAGTGAGTG
CATCGCAGTGCGTTGCAGCGCCTGGGGTGATCGTGGATGTCGCAGCGTGT
GACATGCTCGTGGCGATAGAGGAGGAGGGGAGAGATGGGGGAAAGGGCGC
AGGTTTATTTCGTGGTCTGTTGCACCGGTTTTTTGGGAGTTGTATTTGGT
GGACAGGCGAGGCAGGCAGGCAGGCAGGCAGGCGTGCCTGGCGTTTTTTT
ATCTCGACCGGCCCGGCCCGTGCGATTACAAAACAGAGGTTGGTTTTACA
AGCGTGTCGTTGAGGGACAAGAGAGGGAAAGCGGGGGGGGGCGCAAGAAA
GAGGGCGGAGGGATTGCAGACCACAAGAGAAGATTGCACGAAGGGGGCCG
CGGCGGTATGGCTGGCGTGTTGATCGAGTGCGCGCGGTGCTTTGTTACGT
ACTACGCGAGTGCTCGCCCTGTTGGGCGTTTAACCGCGGATCTCCCTGCC
TGCTTCTTGTGGTCCCCAAACGAGTGTCCATGCCTAACCCTCTTTGTCTT
CTTTTTCGCACGGTTTCTTCGATGTACGGCGGATAGGATAGGATAGGATA
GCCAGGGTGGCCACTTTTCACCCCCTTACGTGCTGCGTCTACCGTGGCCA
GGTTTTGCTTCTGTCACCGGTGTCGAGCGGCCGTTCTTGTCGTGTCTTGT
GTGTTGTCCGTTTTGTGTGAACGGTGGTCTCGTCTACGTTTTGTCTTGTT
CTTGTACTTGTGCTGAGCTACCCCGCCCACGGTGTCCTTCGTTCTCAAAA
TTAGCCGCGATGCAACAAAAAAAACGCTTCTTCTCCTCGCCTAAGTAATA
CAACACCTCAGCCATCTCTCCCTCCCCACGCACGTACACATCGTCTACAC
ACCAAGTCAACACACACTACAGTCGCCACCCTTGCCCTTTAGCCTTCCTT
AAACGGGACCACCTCGTCCCGTGCACCGAATCGTCCCACAATCGTGGTGT
CCCGTCCTGCAGGGATATCGGCTTGCTGGCCCGCTCCATCAGCGGCGCCC
AGCACAGAAGGGCGGTGGCCACCGCCGACACCGCTTCTGCT

Coding sequence (CDS) from alignment at C-linearis_contig11:3312093..3318783-

>mRNA_C-linearis_contig11.1381.1 ID=mRNA_C-linearis_contig11.1381.1|Name=mRNA_C-linearis_contig11.1381.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3342bp|location=Sequence derived from alignment at C-linearis_contig11:3312093..3318783- (Chordaria linearis ClinC8C monoicous)
ATGCCCCTCTGTGCTCGGCTGCCTCGCTGCCTCCACCCAAAGCTCTCTTC
TCTGTTCTCTCCATCCGTGTTTATGATGGCCCGGGATCGGGCACGGTTGT
TAGTCCCCCTTCTGTTCCCGTTGGCGTTGGCGGCTGTGGTACTTGTCGGC
GTGGTGGACGCCTTCCTTCCGTTCAGCCCGGCATCCTACAACATCAACGT
CAAGCTCTCTCAACATGTTCCTGCTGCTGCTTCTGCTCCCCCGGGAGGCA
AGCTGCGGCCGGTGGCCAGCGAGCGTAACTCGCGACCTCCTGCGGCAGGT
AGTGCGATGGTGATTAAGCCAGCCAAGAGAGCCAGGAATTCTGTTCCACC
CAGCTGTAGCCCTGCTGCTGCCCGCGGTCGGTGTTCTGCCAGCAGCATAC
GCCGGGTGTTCTGCGGCGCTGCAGGACTGCTGTCGCTGGATGATGATGAT
GGTGGGGATCAGGGGGGAGGAAGAGGAAAGGGGGAAGGTAACGGCAATGG
CAATGGCAACGGCGGCGACGGTGACGAGTCGTCTGCTGGAGACGAAGGGT
CTAGCGATGGGCGAGATCCCTTAGTGCTCGCAGGCGTTGGCTCTGGGATG
GGAGCAGCCCTCGATGGGCTGAAGGAAGCGATGCGGAACCTTCGCATGCC
TTGGGCCCGGAAGATGCCCCTCTGTGCTCGGCTGCCTCGCTGCCTCCACC
CAAAGCTCTCTTCTCTGTTCTCTCCATCCGTGTTTATGATGGCCCGGGAT
CGGGCACGGTTGTTAGTCCCCCTTCTGTTCCCGTTGGCGTTGGCGGCTGT
GGTACTTGTCGGCGTGGTGGACGCCTTCCTTCCGTTCAGCCCGGCATCCT
ACAACATCAACGTCAAGCTCTCTCAACATGTTCCTGCTGCTGCTTCTGCT
CCCCCGGGAGGCAAGCTGCGGCCGGTGGCCAGCGAGCGTAACTCGCGACC
TCCTGCGGCAGGTAGTGCGATGGTGATTAAGCCAGCCAAGAGAGCCAGGA
ATTCTGTTCCACCCAGCTGTAGCCCTGCTGCTGCCCGCGGTCGGTGTTCT
GCCAGCAGCATACGCCGGGTGTTCTGCGGCGCTGCAGGACTGCTGTCGCT
GGATGATGATGATGGTGGGGATCAGGGGGGAGGAAGAGGAAAGGGGGAAG
GTAACGGCAATGGCAATGGCAACGGCGGCGACGGTGACGAGTCGTCTGCT
GGAGACGAAGGGTCTAGCGATGGGCGAGATCCCTTAGTGCTCGCAGGCGT
TGGCTCTGGGATGGGAGCAGCCCTCGATGGGCTGAAGGAAGCGATGCGGA
ACCTTCGCATGCCTTGGGCCCGGAAGGACTCATCTGGCGAGGAGGGGCAA
GATGGTGACGGGGAGGCGTCCTCCGAGAGCAGCGTGGAACAGCAGCTGCC
CGAGGACTCATCTGGCGAGGAGGGGCAAGATGGTGACGGGGAGGCGTCCT
CCGAGAGCAGCGTGGAACAGCAGCTGCCCGAGGTGCTGGTGGCCGACGTT
GTGGTGGACGAGAGCGTCATCCCCAGGGACGTGCTAGCTTCCGCCGCCGT
CAAGAGCGGCCTCCTTGGACGGGAGGTGCTGGTGGCCGACGTTGTGGTGG
ACGAGAGCGTCATCCCCAGGGACGTGCTAGCTTCCGCCGCCGTCAAGAGC
GGCCTCCTTGGACGGGAGGCTTCCGAGGCGCGGATACAGGCGTGCGCGAA
GATCCTGAACCAGTGGTACCAGTACGAAGGATACATCCTCTCGGGCGTTT
CGAACGCTGTTATCTCACCCAACGGCTTCCGAGGCGCGGATACAGGCGTG
CGCGAAGATCCTGAACCAGTGGTACCAGTACGAAGGATACATCCTCTCGG
GCGTTTCGAACGCTGTTATCTCACCCAACGGAACCATCTCGTTCAGCGTC
AACGAGCCTGTCGTGTCGAAGCTCGAGCCCGTACAGCTTCTCTACTACAA
GGAACCATCTCGTTCAGCGTCAACGAGCCTGTCGTGTCGAAGCTCGAGCC
CGTACAGCTTCTCTACTACAAGCCGGCCAATATCAAGGACCCGGCGAGCG
GGCTGGTCCAAGTTGAGAAAGGAAAAACCAAGGCCAAGACCATCGCGAGG
GGCCTGGGTTTGGAGCCGGCCAATATCAAGGACCCGGCGAGCGGGCTGGT
CCAAGTTGAGAAAGGAAAAACCAAGGCCAAGACCATCGCGAGGGGCCTGG
GTTTGGAGGGCGGAGAGCATTTCAAGGTCGATGCTGACAGGTGGAGGGGC
GTGCTCGGATCCGGCCTGTTCAACGGGGCGCAGCTGTCCGGGCGGAGAGC
ATTTCAAGGTCGATGCTGACAGGTGGAGGGGCGTGCTCGGATCCGGCCTG
TTCAACGGGGCGCAGCTGTCCGGCGCCCATCAGAATGCGGCGGACAAGGG
TTTCACCCTGGACATCAACGTGCAGGAGAGGAGGTCCGTCGTGTTCGAGC
CGGGGGTGACCAAGACGCTGTTCGACAGCAACTGGGCCGGCGAGGCGCCC
ATCAGAATGCGGCGGACAAGGGTTTCACCCTGGACATCAACGTGCAGGAG
AGGAGGTCCGTCGTGTTCGAGCCGGGGGTGACCAAGACGCTGTTCGACAG
CAACTGGGCCGGCGAGATTTGCTTCGAGGAGAAGAACGTCCTGGGTCGCA
ATGGCATGCTGGGCTTAGACCTTCGCCGCTCCATGGCGTCCCCCTTCACC
AGCTTCAGATTTGCTTCGAGGAGAAGAACGTCCTGGGTCGCAATGGCATG
CTGGGCTTAGACCTTCGCCGCTCCATGGCGTCCCCCTTCACCAGCTTCAG
CGTTCGCGTGGGCAACAACCGCTTCGGGCAGCTGGGGGCGTGGCAAGCCT
CCCTTTTCCGGGACTCCATCTCCTCCGCCAGCGCCTCGGGCCTCGGGCGC
GGCACCCTCGGAGGGGGTTACGCCAACAGCTCCATGGGGCCGGCAGCATC
CGCACCCGTCTTCTCCACCGCATCTCCGAGAGGCGTACCCAGCGTTCGCG
TGGGCAACAACCGCTTCGGGCAGCTGGGGGCGTGGCAAGCCTCCCTTTTC
CGGGACTCCATCTCCTCCGCCAGCGCCTCGGGCCTCGGGCGCGGCACCCT
CGGAGGGGGTTACGCCAACAGCTCCATGGGGCCGGCAGCATCCGCACCCG
TCTTCTCCACCGCATCTCCGAGAGGCGTACCCAGGGATATCGGCTTGCTG
GCCCGCTCCATCAGCGGCGCCCAGCACAGAAGGGCGGTGGCCACCGCCGA
CACCGCTTCTGCTGGATATCGGCTTGCTGGCCCGCTCCATCAGCGGCGCC
CAGCACAGAAGGGCGGTGGCCACCGCCGACACCGCTTCTGCT