mRNA_C-linearis_contig11.1345.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig11.1345.1 vs. uniprot
Match: D7FXW6_ECTSI (ABC transporter ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW6_ECTSI) HSP 1 Score: 1086 bits (2808), Expect = 0.000e+0 Identity = 788/1200 (65.67%), Postives = 867/1200 (72.25%), Query Frame = 1
Query: 124 MKY---HVPCLASAVLASIALERAGASAPGG------ANWFLRAPDGSSQGPYGLSQLGEWSSSGYVSLDSQVQWGAGGTPQPLSSVLGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------ARDEWGSLMSDRVTAVEGGRWSESVAAAKGSFKRLFGAGRESGGRRRQ--GGXXXXXXXXXXXXXXXXSGRGGRYSPGA---GRGGPGYSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAWNRGGKGAAPGQGGREWNGAAGGVGGTGDTWPSTNAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPPSQGNG--QAPAWDATPGGSXXXXXXXXXXXXXVSGTPLPPIPEEGGTGPLPPXXLPLPASSP-LAEGFPPSSGPERVDGSGGGG-LAPPPSAAMDGLDPKEIEAFYAAQAEYGGDGSGGEAGGGPAAADARPSKKRDRVWGRRRNDVSKEDLSAMGLNYGDAEREPPRAKAAGGFRXXXXXXXXXXXXXXKRRAVLGGRVSVDSMKLKYEEGWGAEAEGEGMLAAVKTAAGRSLSRMTSPSKAVTSMTPVAGVRLLARAGGLFPLLLWWAFSVTRGVLPVVMSWLVSRLMVQLAGFSAGRYTLSPSHYRDSRLACYRLVGQQAAAGLSLAVTAGVVRGWLRPRAGERSAALCRRALAGVSVAGGRDRPPPAEFRELSLAPWDYMRQVMEFSRAVAGVAAVTAVLHTVWPFRGPMALGGGAAMLVVLESLALWLAGYS-GPDQTHG---DVAEE---LAGGMQGGAVASAEAEARGLRQVLLSKHSALLKTAE-DSGRHARVLSTRSLLRGSLAWLIMGACALYALVCVVEEELAYQFGTDRVTLVITQVWLAHASLQAALSGLGHLASLRPAAARMHAMALANTENGGGNRETGLGTEGGWSNDGPEPADGLRLKGVSFTPSGRSRRALAGVDLRVPAGSVVAVLGRAGAGKTALLQLALGLVKADAGEATFQGRPLQEWETAAYRERVAWLNQVSGRFALSAGENIGAGDANEFANRELWARAAGLSGVSAAIESLPLGYDTLLEDVGGVSALGTAVGGAGAMGRSGLSEGEWQRLQLARFLMRADVAKLLLLDEPFKGVSPGEASRMLAALGAQARATGQ 3618
MKY HV A A+ A +L+RAGA G +NW+LRAPDGSSQGPYGLSQLGEWS +GYVS DSQVQWGAGG PQ LSSVLGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ARDEWGSLMS+RVTAVEGGRWSESV+AAKG+FK+LF GR+S RR++ GG XXXXXXXXXXX GRY PGA GRGG GY D WN GG+ + QGG EW G V GTG+ + Q XXXXXXXX XXX XXXXXXXXXX EL +G Q AWDA GSXXXXXX P IPEE XX PLP P AEG+ SS P G+ AP AAM GLDP+EIEAFYAAQ EYG D GPAA DA+P K+ WGRR D+ KE+L+AMGLNYG+A+REP R ++ R RR VLGGRVSVDSMKLKYEEGW EAEGEG+ AAVK+ AGRS+SRMTSPSKAVTSMTPVAGVRLLARAGG+FPLLLWWAFSV RGVLPVVMSWLVSRLM +LA FSAGRYTLS SHYR+ R AC++L+GQQA AGLSL V AGVVRGWLRPRA ERSAA+CRRALAGVSVAGG DRPPP+EFRELSLAPW YM+QVME SR VAGVAAV AVL TVWPFRGP+ LGGGAA+L++LES+ L G + G DVAE + GG GGAVA+AEAEARGLR+VLLSK+SA+L+ AE GR +R+++TRS++RGS+ WL+M A A+YALV VVEEELA+QFGT RVTL+ITQVWLA+ASLQ ALSGLG +A LR AARM A+ALA ENGGG +ETGLGTEGGWSNDGPE ADGLRL+GVSFTPSGR+R+AL+ VDL PAGSVVAVLG AGAGKTALLQLALGL+KAD GEA FQGRPLQEWET AYRERVAWL+QVSGRF L+AGENIGAGD +EF+NRELWARAAGLSG + AIESLPLGYDTLLED SGLSEGEWQRLQLARFLMRADVAKLLLLDEPFKGVSP EASRMLAALGAQARATGQ
Sbjct: 1 MKYAYLHVSLAAVALAAFASLDRAGAVTAQGXXXXXXSNWYLRAPDGSSQGPYGLSQLGEWSRAGYVSADSQVQWGAGGPPQALSSVLGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPYRHTGGRGSARPGGGARDEWGSLMSERVTAVEGGRWSESVSAAKGTFKKLFSVGRKSDNRRKRVNGGRGSGRXXXXXXXXXXX----GRYPPGARGPGRGGRGYP--------------QGRGSSYGAPPGGSGDGGWNSGGRXSXYXQGGGEW----GDVQGTGEVNQGGSWQTNSQASSAQPLSQQXXXXXXXXAGGVSPPXXXLAXXXXXXXXXXVPSPVSPELQDGEGGXXXQGVAWDAAGSGSXXXXXXV---------APPSSIPEEXXXXXX--XXNPLPGQMPPSAEGY--SSSPLGSSGAAHSSPAAPAAGAAMGGLDPREIEAFYAAQKEYGADS-------GPAAGDAQPRKRMG--WGRRGKDIPKENLAAMGLNYGEADREPVRERSPR--RRGRSGWFGFAKGSRGRREVLGGRVSVDSMKLKYEEGWNVEAEGEGVFAAVKSVAGRSISRMTSPSKAVTSMTPVAGVRLLARAGGVFPLLLWWAFSVMRGVLPVVMSWLVSRLMHRLADFSAGRYTLSTSHYRECRSACFKLLGQQAGAGLSLGVAAGVVRGWLRPRARERSAAVCRRALAGVSVAGGTDRPPPSEFRELSLAPWSYMQQVMELSRGVAGVAAVVAVLQTVWPFRGPVTLGGGAAVLLLLESIRTLLGTEDPGAAEVRGGGSDVAEPSGGIHGGASGGAVANAEAEARGLRKVLLSKNSAVLEAAEHQEGRKSRIITTRSVVRGSVTWLVMSAFAVYALVSVVEEELAFQFGTARVTLLITQVWLAYASLQGALSGLGQVARLRSTAARMQAIALARPENGGGGKETGLGTEGGWSNDGPEAADGLRLQGVSFTPSGRTRQALSSVDLHAPAGSVVAVLGGAGAGKTALLQLALGLMKADKGEAMFQGRPLQEWETGAYRERVAWLSQVSGRFGLTAGENIGAGDPSEFSNRELWARAAGLSGANTAIESLPLGYDTLLEDGXXXXXXXXXXX------XSGLSEGEWQRLQLARFLMRADVAKLLLLDEPFKGVSPSEASRMLAALGAQARATGQ 1148
BLAST of mRNA_C-linearis_contig11.1345.1 vs. uniprot
Match: A0A6H5KVL8_9PHAE (ABC transporter domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL8_9PHAE) HSP 1 Score: 818 bits (2112), Expect = 2.360e-279 Identity = 551/912 (60.42%), Postives = 616/912 (67.54%), Query Frame = 1
Query: 562 ARDEWGSLMSDRVTAVEGGRWSESVAAAKGSFKRLFGAGRESGGRRRQ--GGXXXXXXXXXXXXXXXXSGRGGRYSPGA---GRGGPGYSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAWNRGGKGAAPGQGGREWNG--AAGGVGGTGDTWPSTNAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPPSQGN--GQAPAWDATPGGSXXXXXXXXXXXXXVSGTPLPPIPEEGG-TGPLPPXXLPLPASSPLAEGFPPSSGPERVDGSGGGG-LAPPPSAAMDGLDPKEIEAFYAAQAEYGGDGSGGEAGGGPAAADARPSKKRDRVWGRRRNDVSKEDLSAMGLNYGDAEREPPRAKAAGGFRXXXXXXXXXXXXXXKRRAVLGGRVSVDSMKLKYEEGWGAEAEGEGMLAAVKTAAGRSLSRMTSPSKAVTSMTPVAGVRLLARAGGLFPLLLWWAFSVTRGVLPVVMSWLVSRLMVQLAGFSAGRYTLSPSHYRDSRLACYRLVGQQAAAGLSLAVTAGVVRGWLRPRAGERSAALCRRALAGVSVAGGRDRPPPAEFRELSLAPWDYMRQVMEFSRAVAGVAAVTAVLHTVWPFRGPMALGGGAAMLVVLESLALWLAGYS-GPDQTHG---DVAEE---LAGGMQGGAVASAEAEARGLRQVLLSKHSALLKTAE-DSGRHARVLSTRSLLRGSLAWLIMGACALYALVCVVEEELAYQFGTDRVTLVITQVWLAHASLQAALSGLGHLASLRPAAARMHAMALANTENGGGNRETGLGTEGGWSNDGPEPADGLRLKGVSFTPSGRSRRALAGVDLRVPAGSVVAVLGRAGAGKTALLQLALGLVKADAGEATFQGRPLQEWETAAYRERVAWLNQVS 3240
ARDEWGSLMS+RVTAVEGGRWSESV+AAKG+FK+LF GR+S RR++ GG XXXXXXXXXXX GRY GA GRGG GY D WN GG+G+ QG EW G AAGGV GD+W TN+Q EL +G Q AWDA GS XXXXXXXXXXXX G +PP AEG+ PS P G+ AP A M GLDP+EIEAFYAAQ EYG D GPAA DA+P K+ R GRR D+ KEDL+AMGLNYG+A+REP R ++ R RR VLGGRVSVDSMKLKYEEGW E EGEG+ AAVK+ AGRS+SRMTSPSKAVTSMTPVA VRLLARAGG+ PLLLWWAFSV RGVLPVVMSWLVSRLM QLA FSAGRYTLS S YR+ R AC++L+GQQA AGLSLAV AGVVRGWLRPRA ERSAALCRRALAGVSVAGG D+PPP+EFRELSLAPW YM+QVME SR VAGVAAV AVL TVWPFRGP+ LGGGA +L++LE + LA G + G DVAE + GG GGAVASAEAEARGLRQVLLSK+SA+L+ AE GR +R+++TRS++RGS+ WL+M A A+YALV VVEEELA+QFGT RVTLVITQVWLA+ASLQ ALSGLG +A LRP AARM A+ALA EN GG ++TGLGTEGGWSNDGPE DGLRL GVSF PSGR+R+AL+ VDL PAGSVVAVLG AGAGKTALLQLALGL+KAD GEA FQGRPLQEWET AYRERVAWL+Q S
Sbjct: 48 ARDEWGSLMSERVTAVEGGRWSESVSAAKGTFKKLFTVGRKSDNRRKRVNGGRGSGRXXXXXXXXXXX----GRYPLGARDPGRGGRGYP--------------QGRGSSYGASPGSIGDGGWNSGGRGSGYXQGIGEWGGVQAAGGVN-QGDSW-QTNSQ---------------------------------------------------ELRDGEGGVQRQGVAWDAAGSGSDXXXXXXXXXXXXXXXXXXXXXXXXXXFQGQMPPP----------AEGYSPS--PLGSSGAAHSSPAAPAAGATMGGLDPREIEAFYAAQKEYGADS-------GPAAGDAQPRKRVGR--GRRGKDIPKEDLTAMGLNYGEADREPVRERSPR--RRGRRRWFGFAKGSRVRREVLGGRVSVDSMKLKYEEGWNVETEGEGVFAAVKSVAGRSISRMTSPSKAVTSMTPVACVRLLARAGGVIPLLLWWAFSVMRGVLPVVMSWLVSRLMHQLADFSAGRYTLSTSQYRECRSACFKLLGQQAGAGLSLAVAAGVVRGWLRPRARERSAALCRRALAGVSVAGGIDQPPPSEFRELSLAPWSYMQQVMELSRDVAGVAAVVAVLQTVWPFRGPVTLGGGATVLLLLEGIRTLLATEDPGAAEVRGSGSDVAEPSGGIPGGASGGAVASAEAEARGLRQVLLSKYSAVLEAAEHQEGRKSRIITTRSVVRGSVTWLVMAAFAVYALVSVVEEELAFQFGTARVTLVITQVWLAYASLQGALSGLGQVARLRPTAARMQAIALAWPENSGGEKDTGLGTEGGWSNDGPEADDGLRLLGVSFRPSGRTRQALSSVDLHAPAGSVVAVLGGAGAGKTALLQLALGLMKADEGEAMFQGRPLQEWETGAYRERVAWLSQAS 865
BLAST of mRNA_C-linearis_contig11.1345.1 vs. uniprot
Match: A0A538QRJ4_9DELT (ABC transporter ATP-binding protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A538QRJ4_9DELT) HSP 1 Score: 130 bits (328), Expect = 1.070e-27 Identity = 82/201 (40.80%), Postives = 115/201 (57.21%), Query Frame = 1
Query: 2947 GGWSNDGPEPADGLRLKGVSFTPSGRSRRALAGVDLRVPAGSVVAVLGRAGAGKTALLQLALGLVKADAGEATFQGRPLQEWETAAYRERVAWLNQVSGRFALSAGENIGAGDANEFANRELWARAAGLSGVSAAIESLPLGYDTLLEDVGGVSALGTAVGGAGAMGRSG--LSEGEWQRLQLARFLMRADVAKLLLLDEP 3543
GG ++ GP P DG+R +GVSFT G + AL+G+DL +P GS +A++G G+GKT L++L L + G T GR L+EW +A R+ + Q R+ L GENIGAGD + +R+ WA AA + IE+LP YDT L G ++G LS G+WQ++ L+R MR D A +L+LDEP
Sbjct: 331 GGTASAGPRPGDGVRFEGVSFTYPGSRQPALSGIDLHIPPGSKLAIVGENGSGKTTLIKLLTRLYEPSEGRITLDGRDLREWSPSALHRRIGVIFQDFVRYQLKVGENIGAGDDRAYEDRQRWADAAERGLAAPIIETLPEHYDTQL----------------GKWFKNGRELSLGQWQKVALSRSFMRRD-ADVLVLDEP 514
BLAST of mRNA_C-linearis_contig11.1345.1 vs. uniprot
Match: A0A7Y2YZ81_9GAMM (ABC transporter ATP-binding protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2YZ81_9GAMM) HSP 1 Score: 125 bits (315), Expect = 4.710e-26 Identity = 76/193 (39.38%), Postives = 106/193 (54.92%), Query Frame = 1
Query: 2965 GPEPADGLRLKGVSFTPSGRSRRALAGVDLRVPAGSVVAVLGRAGAGKTALLQLALGLVKADAGEATFQGRPLQEWETAAYRERVAWLNQVSGRFALSAGENIGAGDANEFANRELWARAAGLSGVSAAIESLPLGYDTLLEDVGGVSALGTAVGGAGAMGRSGLSEGEWQRLQLARFLMRADVAKLLLLDEP 3543
GP+P DG+R +GVSFT G ++ AL +DL + G +A++G G+GKT L++L L + D+G G LQ+WE A R+R+ + Q R+ GENIG GD F ++ WA AA A I+ LP GY T L G G LS G+WQ++ LAR MR++ A +L+LDEP
Sbjct: 344 GPQPHDGIRFEGVSFTYPGAAQPALRDIDLHIRPGESLALVGENGSGKTTLIKLLTRLYRPDSGRILLDGLDLQQWEEDALRQRIGVIFQDFARYQFLVGENIGVGDVRFFTEQDRWAEAAEKGMADAIIKDLPKGYQTQL--------------GKWFAGGQELSGGQWQKIALARAFMRSE-ADILVLDEP 521
BLAST of mRNA_C-linearis_contig11.1345.1 vs. uniprot
Match: A0A7W0V8P4_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0V8P4_9DELT) HSP 1 Score: 119 bits (298), Expect = 9.160e-26 Identity = 82/205 (40.00%), Postives = 110/205 (53.66%), Query Frame = 1
Query: 2935 LGTEGGWSNDGPEPADGLRLKGVSFTPSGRSRRALAGVDLRVPAGSVVAVLGRAGAGKTALLQLALGLVKADAGEATFQGRPLQEWETAAYRERVAWLNQVSGRFALSAGENIGAGDANEFANRELWARAAGLSGVSAAIESLPLGYDTLLEDVGGVSALGTAVGGAGAMGRSG--LSEGEWQRLQLARFLMRADVAKLLLLDEP 3543
+GTE +G P DG+R + VSF G AL VDL +P GS +A++G G+GKT L++L L + G T GR L+EW +A R+ + Q R+ L+ GENIGAGD + F +R+ W AA IESLP YDT L G ++G LS G+WQ++ LAR MR D A +L+LDEP
Sbjct: 36 MGTE----TEGTVPRDGVRFEKVSFQYPGSREYALERVDLHIPPGSKLAIVGENGSGKTTLIKLLTRLYEPTEGRITLDGRDLREWSPSALHRRIGVIFQDFVRYQLTVGENIGAGDDHAFTDRDRWEDAAERGLAKPVIESLPETYDTQL----------------GRWFKNGRELSLGQWQKVALARSFMRKD-ADILVLDEP 219
BLAST of mRNA_C-linearis_contig11.1345.1 vs. uniprot
Match: A0A7W0T1S6_9DELT (ABC transporter ATP-binding protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0T1S6_9DELT) HSP 1 Score: 125 bits (313), Expect = 1.180e-25 Identity = 81/200 (40.50%), Postives = 112/200 (56.00%), Query Frame = 1
Query: 2950 GWSNDGPEPADGLRLKGVSFTPSGRSRRALAGVDLRVPAGSVVAVLGRAGAGKTALLQLALGLVKADAGEATFQGRPLQEWETAAYRERVAWLNQVSGRFALSAGENIGAGDANEFANRELWARAAGLSGVSAAIESLPLGYDTLLEDVGGVSALGTAVGGAGAMGRSG--LSEGEWQRLQLARFLMRADVAKLLLLDEP 3543
G + +G +P DG+R + VSFT G AL GVDL +P GS +A++G G+GKT L++L L + AG T GR L++W AA + R+ + Q R+ L+ GENIGAGD + +RE W AA IE+LP +DT L G ++G LS G+WQ++ LAR MR D A +L+LDEP
Sbjct: 392 GTATEGTKPGDGVRFEAVSFTYPGSRELALDGVDLHIPPGSKLAIVGENGSGKTTLIKLLTRLYEPTAGRITLDGRDLRDWSLAALQRRIGVIFQDFVRYQLTVGENIGAGDDRAYDDRERWDDAAERGLAKPIIETLPAKFDTQL----------------GRWFKNGRELSLGQWQKVALARSFMRRD-ADVLVLDEP 574
BLAST of mRNA_C-linearis_contig11.1345.1 vs. uniprot
Match: A0A7V9L966_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V9L966_9DELT) HSP 1 Score: 124 bits (310), Expect = 2.840e-25 Identity = 79/195 (40.51%), Postives = 106/195 (54.36%), Query Frame = 1
Query: 2965 GPEPADGLRLKGVSFTPSGRSRRALAGVDLRVPAGSVVAVLGRAGAGKTALLQLALGLVKADAGEATFQGRPLQEWETAAYRERVAWLNQVSGRFALSAGENIGAGDANEFANRELWARAAGLSGVSAAIESLPLGYDTLLEDVGGVSALGTAVGGAGAMGRSG--LSEGEWQRLQLARFLMRADVAKLLLLDEP 3543
GP+P DG+R +GVSF G AL G+DL +P GS +A++G G+GKT L++L L + G T GR L+EW +A R+ + Q R+ L GENIGAGD + +RE WA AA IE LP YDT L G ++G LS G+WQ++ L+R R D A +L+LDEP
Sbjct: 402 GPKPGDGIRFQGVSFHYPGSREPALDGIDLHIPPGSKLAIVGENGSGKTTLIKLLTRLYEPTEGRITLDGRDLREWSQSALHRRIGVIFQDFVRYQLKVGENIGAGDDRAYEDRERWADAADRGLAKPIIEGLPDQYDTQL----------------GRWFKNGRELSLGQWQKIALSRSFFRKD-ADVLVLDEP 579
BLAST of mRNA_C-linearis_contig11.1345.1 vs. uniprot
Match: A0A7W0WVT4_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0WVT4_9DELT) HSP 1 Score: 117 bits (294), Expect = 6.710e-25 Identity = 81/208 (38.94%), Postives = 112/208 (53.85%), Query Frame = 1
Query: 2926 ETGLGTEGGWSNDGPEPADGLRLKGVSFTPSGRSRRALAGVDLRVPAGSVVAVLGRAGAGKTALLQLALGLVKADAGEATFQGRPLQEWETAAYRERVAWLNQVSGRFALSAGENIGAGDANEFANRELWARAAGLSGVSAAIESLPLGYDTLLEDVGGVSALGTAVGGAGAMGRSG--LSEGEWQRLQLARFLMRADVAKLLLLDEP 3543
ET T G + +G +P DG+R + V+F G AL +DL +P GS +A++G G+GKT L++L L + G T GR L+EW AA + R+ + Q R+ L+ GENIGAGD + +R+ W AA IE+LP YDT L G R+G LS G+WQ++ LAR MR D A +L+LDEP
Sbjct: 66 ETPTMTPPGTATEGTKPGDGVRFEAVTFMYPGSRDIALDSIDLHIPPGSKLAIVGENGSGKTTLIKLLTRLYEPTEGRITLDGRDLREWSLAALQRRIGVIFQDFVRYQLTVGENIGAGDDFAYNDRQRWDDAAERGLAKPVIETLPDKYDTQL----------------GRWFRNGRELSLGQWQKVALARSFMRRD-ADILVLDEP 256
BLAST of mRNA_C-linearis_contig11.1345.1 vs. uniprot
Match: A0A7Y6PUD4_9DELT (ABC transporter ATP-binding protein n=1 Tax=Kofleriaceae bacterium TaxID=2212474 RepID=A0A7Y6PUD4_9DELT) HSP 1 Score: 120 bits (301), Expect = 2.390e-24 Identity = 82/203 (40.39%), Postives = 107/203 (52.71%), Query Frame = 1
Query: 2941 TEGGWSNDGPEPADGLRLKGVSFTPSGRSRRALAGVDLRVPAGSVVAVLGRAGAGKTALLQLALGLVKADAGEATFQGRPLQEWETAAYRERVAWLNQVSGRFALSAGENIGAGDANEFANRELWARAAGLSGVSAAIESLPLGYDTLLEDVGGVSALGTAVGGAGAMGRSG--LSEGEWQRLQLARFLMRADVAKLLLLDEP 3543
T GG + +GP+P DG+R VSF G AL VDL +P GS +A++G G+GKT L++L L + +G T GR L+EW AA R+ + Q R+ L+ GENIGAGD + +R W AA I P YDT L G RSG LS G+WQ++ LAR MR D A +L+LDEP
Sbjct: 327 TPGGTATEGPDPKDGVRFDHVSFVYPGAHDIALTDVDLHIPPGSKLAIVGENGSGKTTLIKLLTRLYEPTSGRITIDGRDLREWAPAALHRRIGVIFQDFVRYQLTVGENIGAGDDRAYEDRGRWDDAAERGLAKPFISGFPDQYDTQL----------------GKWFRSGRELSLGQWQKVALARAFMRRD-ADILVLDEP 512
BLAST of mRNA_C-linearis_contig11.1345.1 vs. uniprot
Match: A0A7W0Y8R6_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0Y8R6_9DELT) HSP 1 Score: 114 bits (285), Expect = 2.600e-24 Identity = 74/195 (37.95%), Postives = 105/195 (53.85%), Query Frame = 1
Query: 2965 GPEPADGLRLKGVSFTPSGRSRRALAGVDLRVPAGSVVAVLGRAGAGKTALLQLALGLVKADAGEATFQGRPLQEWETAAYRERVAWLNQVSGRFALSAGENIGAGDANEFANRELWARAAGLSGVSAAIESLPLGYDTLLEDVGGVSALGTAVGGAGAMGRSG--LSEGEWQRLQLARFLMRADVAKLLLLDEP 3543
GP+P DG+R +GVSF G A++G+DL +P GS +A++G G+GKT L++L + + G + G L+EW A R+ + Q R+ + GENIGAGD + +R W AA IE+LP YDT L G ++G LS G+WQ++ LAR MR D A +L+LDEP
Sbjct: 15 GPKPGDGVRFEGVSFHYPGWREPAISGIDLHIPPGSKLAIVGENGSGKTTLIKLLTRMYEPTEGRISLDGLDLREWSQPALHRRIGVIFQDFVRYQFTVGENIGAGDDRGYDDRTRWETAAEHGLAKPIIETLPDRYDTQL----------------GRWFKNGRELSLGQWQKVALARSFMRED-ADILVLDEP 192 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1345.1 >prot_C-linearis_contig11.1345.1 ID=prot_C-linearis_contig11.1345.1|Name=mRNA_C-linearis_contig11.1345.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1206bp RHTHRSRFVGLAARKRAKEDLSGHTSPAFSGSHWAKTGRLLMKYHVPCLAback to top mRNA from alignment at C-linearis_contig11:2946888..2958052+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1345.1 ID=mRNA_C-linearis_contig11.1345.1|Name=mRNA_C-linearis_contig11.1345.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11165bp|location=Sequence derived from alignment at C-linearis_contig11:2946888..2958052+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:2946888..2958052+ >mRNA_C-linearis_contig11.1345.1 ID=mRNA_C-linearis_contig11.1345.1|Name=mRNA_C-linearis_contig11.1345.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7236bp|location=Sequence derived from alignment at C-linearis_contig11:2946888..2958052+ (Chordaria linearis ClinC8C monoicous)back to top |