mRNA_C-linearis_contig11.1296.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1296.1 vs. uniprot
Match: A0A6H5JS20_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS20_9PHAE) HSP 1 Score: 657 bits (1696), Expect = 1.950e-224 Identity = 419/734 (57.08%), Postives = 463/734 (63.08%), Query Frame = 3
Query: 51 MAQKVSILDGEVNRNWQLKDSNGDKHLLSLFHDCVTGARAAMLDYE---EVPGSAGTTNVFNLVAGRVDIPFSMRKGSEQALDNGCLSIVRRGLTGFSYECEVNGKLVLDTTSVVQNTEYEYNVSMPATVDTGSRVSGVTWYEVHTMRKADNKGTLVHRRFRDFFALHEQVGSLMKGHHLRSSLPRFPGKKSKLWTNHGDLGFVEDRRRALEQYVKTLLQLPHVSTLDSTRAFLGMVGNLREFSVPWEGQEFGVTLKRASEVAGGRLAAGGA-TGSPDGCAGAPPVITSVKGKGKSPPGVYPGDRLLKVNGDSTELISLEAAWSSVARATRPVMLHFLGPILRMDSTLSPLPEAFLRHRTSPGQYVL---PGDGGPKKNSSSVGTASSGGS---------------QWSLRGMWPAGKPQGPA------------------------------GNGEGRRXXXXXXXXXXXXXXAAATNQNLLPANSRLFGGSA---AGVGGRSAGQSKDSMFDSWRAQGGAGLGEEGGSRIPEKPLRDSHSVS-GGVGGSKGSSHWMPDFSHGSAGLASSAEP--------------------AGGGFSGETRA--------------SAGIPAGSNVSH-GYGNGSSLAAPPAYPSKQPNAPAARRVAPAEGERRSDGGSVGEMFSDSTFTS-FGAAARFHDGSAHQPAPAGPF--GTAIAMEGIGGGFEEDDGEDDENPFA 1970
MAQ+VSILDGEVNRNW L DS G+KHLL+LFHDC+TGARAAMLDYE EVPGSAGTTN+FNLVAGRVDIPFSM+K S A DNG LSI+RRGLTGFSYECEVNGKLVLDTTSVVQNTEYEY VS+PATVDTGSRV GVTWYEVHTMRKAD+KGTLVHRRFRDF AL EQV SLMKGHHLRSSLPRFPGKKSKLWTNHGDL FVE+RR+ALEQY+KTLLQLPHVSTLDSTRAFLGMVGNLREFSV WEG+E G LKRASEVAGG+L GGA + P+G GAPPVITSV G G+SPPGV GDRL KVNGDSTEL+SLEAAWSSVARATRPVMLHFLGPILRMDSTL+PLPEAFLRHRT PG+ + P DGGP S + + SGG+ QW LRGM PA + P+ GNG GR A TN PANS LFGG A A GG K+S+FDSWR+ A LR + S G WMPD S GS SS+ P AG G + + SA G N G GSS+AA PA+PS+Q NAP A AEG R S G + TF+S ARF ++ G F T + GFEE+DGE++ENPFA
Sbjct: 1 MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAKEEVPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAEDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTEYEYEVSVPATVDTGSRVRGVTWYEVHTMRKADSKGTLVHRRFRDFHALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVLGNGRSPPGVCSGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRQLPSTGPQDGGPSLAGSFLRPSGSGGASAXXXXXXXXXXXGGQWRLRGMLPAWSREQPSKPGDGSALAPGGSAAPGREWNPHENPRTRIGNGVGRGGAVGPFGNGTGAAAAGRTN----PANSSLFGGDATAGASGGGMGGAAKKESLFDSWRSPRAAXXXXX---XXXXGTLRQAPGSSFGXXXXXXXXXAWMPDTSRGSGTSTSSSPPGNMLGAAGAVPTPPTSREELAGSGSTSNGNSVRGPTDRPARGGLFSAAGSGGENAGFPGSSGGSSMAASPAWPSEQSNAPLGG-AAGAEGRVRGGESSGGRNLAVPTFSSSLDTGARF---TSEVGRSGGTFVGTTTLGESDDHHGFEEEDGEEEENPFA 723
BLAST of mRNA_C-linearis_contig11.1296.1 vs. uniprot
Match: D8LMZ7_ECTSI (PX domain containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ7_ECTSI) HSP 1 Score: 508 bits (1307), Expect = 2.420e-171 Identity = 271/355 (76.34%), Postives = 296/355 (83.38%), Query Frame = 3
Query: 261 MRKGSEQALDNGCLSIVRRGLTGFSYECEVNGKLVLDTTSVVQNTEYEYNVSMPATVDTGSRVSGVTWYEVHTMRKADNKGTLVHRRFRDFFALHEQVGSLMKGHHLRSSLPRFPGKKSKLWTNHGDLGFVEDRRRALEQYVKTLLQLPHVSTLDSTRAFLGMVGNLREFSVPWEGQEFGVTLKRASEVAGGRLAAGGA-TGSPDGCAGAPPVITSVKGKGKSPPGVYPGDRLLKVNGDSTELISLEAAWSSVARATRPVMLHFLGPILRMDSTLSPLPEAFLRHRTSPGQYV---LPGDGGPK------KNSSSVGTASSG---------GSQWSLRGMWPAGKPQGPAGNGEG 1268
M+K S A DNG LSI+RRGLTGFSYECEVNGKLVLDTTSVVQNT+YEY VS+PATVDTGSRVSGVTWYEVHTMRKAD+KGTLVHRRFRDF+AL EQV SLMKGHHLRSSLPRFPGKKSKLWTNHGDL FVE+RR+ALEQY+KTLLQLPHVSTLDSTRAFLGMVGNLREFSV WEG+E G LKRASEVAGG+L GGA + P+G GAPPVITSV G G+SPPGV PGDRL KVNGDSTEL+SLEAAWSSVARATRPVMLHFLGPILRMDSTL+PLPEAFLRHRT PG+ + P DGGP + S S G +++G G QWSLRGM PA + P+ G+G
Sbjct: 1 MKKKSPTAEDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRQLPSTAPQDGGPPLAGSFLRPSGSGGASAAGPAGAAGGVDGGQWSLRGMLPAWSREQPSKPGDG 355
BLAST of mRNA_C-linearis_contig11.1296.1 vs. uniprot
Match: A0A835YSM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM5_9STRA) HSP 1 Score: 229 bits (584), Expect = 1.030e-61 Identity = 136/342 (39.77%), Postives = 191/342 (55.85%), Query Frame = 3
Query: 66 SILDGEVNRNWQLKDSNGDKHLLSLFHDCVTGARAAMLDYEEVPGSAGTTNVFNLVAGRVDIPFSMRKGSEQALDNGCLSIVRRGLTGFSYECEVNGKLVLDTTSVVQNTEYEYNVSMPATVDT----GSRVSGVTWYEVHTMRKADNKGTLVHRRFRDFFALHEQVGSLMKGHHLRSSLPRFPGKKSKLWTNHGDLGFVEDRRRALEQYVKTLLQLPHVSTLDSTRAFLGMVGNLREFSVPWEGQEFGVTLKRASEVAGGRLAAGGATGS------PDGCAGAPPVITSVKGKGKSPPGVYPGDRLLKVNGDSTELISLEAAWSSVARATRPVMLHFLGPI 1061
S+ GE+NR+W+ DS G +H+LSL HDCV+GARA +LDY E+ SAGT+N NL+ G I F ++ E G L I R G+ G+ Y CEV+G+ + +TTS V N E+E++V +P++V G VTWY + R D T VHRR+ DF LH+Q +MKGHHL SLP P K L + D F+E RR L+ Y++TLL++PHV LD+TRAFLG+VG+LRE R+ V+GG GGA + DG + +T + +P GV GD LL+V G + E SL + + +P ++H + +
Sbjct: 90 SVFSGEINRHWEFLDSAGGRHVLSLIHDCVSGARACLLDYAELKDSAGTSNCLNLLFGAAKIAFEVKATGEW----GKLEIRRSGILGYQYRCEVDGRAIRETTSKVNNQEHEFDVRIPSSVQACAYKGGDQPNVTWYLLRVRRLRDGACTEVHRRYTDFEMLHQQCDGMMKGHHLSDSLPPLPCKSPLL--DRSDAAFIESRRAELQAYLRTLLRVPHVGGLDTTRAFLGLVGDLRE---------------RSFVVSGGAAGGGGAGFALTADVQGDGLSDPHGFLTVAQLLRGAPAGVAVGDMLLRVGGATIEGKSLLQVTERLEKMPQPYLVHLISAV 410
BLAST of mRNA_C-linearis_contig11.1296.1 vs. uniprot
Match: A0A7S2DHE0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHE0_9STRA) HSP 1 Score: 214 bits (546), Expect = 2.370e-58 Identity = 134/369 (36.31%), Postives = 196/369 (53.12%), Query Frame = 3
Query: 39 CRYIMAQKVSILDGEVNRNWQLKDSNGDKHLLSLFHDCVTGARAAMLDYEEVPGSAGTTNVFNLVAGRVDIPFSMRKGSEQALDNGCLSIVRRGLTGFSYECEVNGKLVLDTTSVVQN-------TEYEYNVSM-------PATVDTGSRVS-----------------GVTWYEVHTMRKADNKGTLVHRRFRDFFALHEQVGSLMKGHHLRSSLPRFPGKKSKLWTNHGDLGFVEDRRRALEQYVKTLLQLPHVSTLDSTRAFLGMVGNLREFSVPWEGQEFGVTLKRASEVAGGRLAAGGATGSPDGCAGAPPVITSVKGKGKSPPGVYPGDRLLKVNGDSTELISLEAAWSSVARATRPVMLHFL 1052
C Q VS+L GEVNR+W D +G H +SL+H VTGARAAMLDYEE+PGS GT+++F+ G IPFS+ S + G L+I R G+ GF Y C V G++V + T +V T +++V+ PA +D G VS V WY + +R++D T VHRRFRDF L Q+ + +GHHL+SSLP+ P K+ K +H D F+E+R+ LE +++ L+++PHV + ST FLG +LRE S+ + ++ GV L +A++ + P + SV+G + + PGD + K+NG ST + E S+ RP + HFL
Sbjct: 4 CNSTRMQMVSVLSGEVNRSWLFPDQDGRVHEVSLYHHTVTGARAAMLDYEELPGSLGTSSMFHTTHG---IPFSVSSTSG-VITEGSLNIHRHGVFGFRYSCLVAGRVVPECTLMVDRKTAGNDVTPQQHDVTQHGGLLPSPAIMDAGVVVSIDDXXXXXXXXXXXXELSVAWYSLRVVRRSDQATTTVHRRFRDFVELASQLQASFQGHHLQSSLPQPPRKEFKYLKDHRDPAFLEERKHHLEIFMRRLVEVPHVLHVSSTLTFLGFSNHLREMSLIFTTEKIGVRLSKATD------------------SDFPATVESVEGHQQGRHEIRPGDIVSKINGHSTAFMKFEEVVRSIQTIPRPFVCHFL 350
BLAST of mRNA_C-linearis_contig11.1296.1 vs. uniprot
Match: A0A4D9CLT8_9STRA (PX domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLT8_9STRA) HSP 1 Score: 188 bits (477), Expect = 4.420e-46 Identity = 121/344 (35.17%), Postives = 177/344 (51.45%), Query Frame = 3
Query: 60 KVSILDGEVNRNWQLKDSNGDKHLLSLFHDCVTGARAAMLDYEEVPGSAGTTNVFNLVAGRVDIPFSMRKGSEQALDNGCLSIVRRGLTGFSYECEVNGKLVLDTTS-VVQNTEYEYNVSMPATVDT-GSRVSGVTWYEVHTMRKADNKGTLVHRRFRDFFALHEQVGSLMKGHHLRSSLPRFPGKKSKLWTNHGDLGFVEDRRRALEQYVKTLLQLPHVSTLDSTRAFLGMVGNLREFSVPWEGQEFGVTLKRASEVAGGRLAAGGATGSPDGCAGAPPVITSVK--GKGKSPPGVYPGDRLLKVNGDSTELIS-LEAAWSSVARATRPVMLHFLGPILRMDS 1076
+ ++L GEV+R+W G KH++ L+HD VTG R+ + EEVPGS G++ F+ A ++ G +Q G + I + GL F Y C VNG+ + T + E +N+++ + S+ VTWYE+ R +D TLVHRR+R+F L EQV + KGHHLRSSLP PG++ KL +H D FVE+RR LE + LL +PHV + + FLG L+E SV + ++ G+++ R T P+ V+T VK G G V GD L KV G+ + V+R RP+++HFL + R S
Sbjct: 3 RTNVLQGEVHRSWVWLSPAGAKHVIDLWHDTVTGVRSVAVGMEEVPGSMGSSPFFSTEAHHINFTV----GQDQC--RGMVIIEKAGLFSFRYTCVVNGRPLKATLQGLADEDEERFNIAILGAANAYSSKEKSVTWYELTVTRGSDGARTLVHRRYREFVCLFEQVHAAFKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSVPHVGAMVPVQVFLGFFDRLKEHSVIFTQRDLGLSITR--------------TVVPEESI----VVTRVKEAGPGGQKSRVMVGDTLSKVGGEPVSKFGGFDGVAFQVSRGLRPIVIHFLEAVDRNPS 322
BLAST of mRNA_C-linearis_contig11.1296.1 vs. uniprot
Match: A0A7S3NJE9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJE9_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.140e-40 Identity = 126/369 (34.15%), Postives = 187/369 (50.68%), Query Frame = 3
Query: 63 VSILDGEVNRNWQLKDSNGDKHLLSLFHDCVTGARAAMLDYEEVPGSAGTTNVFNLVAGRVDIPFSMRKGSEQALDNGCLSIVRRGLTGFSYECEVNGKLVLDTTSV-------------------VQNTEYEYNVSMPATV-DTGSRVSGVTWYEVHTMR-KADNKGTLVHRRFRDFFALHEQVGSLMKGHHLRSSLPRFPGKKSKLWTNHGDLGFVEDRRRALEQYVKTLLQLPHVSTLDSTRAFLGMVGNLREFSVPWEGQEFGVTLKRA----SEVAGGRLAAGGATGSPDGCAGAPPVI-TSVK----------GKGKSPPGVYP--GDRLLKVNGDSTELISLEAAWSSVARATRPVMLHFLG 1055
VSI GEV R+W+ +D G KH +SL+H +TGARAAM+D+EE+ GS GT++VF+ A R +PF + GS +G +SI R L GF Y C V+G LV + T+ +Q Y V AT D + WY V T ++ + T VHRRFRDF L E + + GHH+ SS+P P K+ KL +H D F+E RR L+ YV+ L +P V + + F G+ RE+S+ + + G T+ + S AG + PD A ++ TSV+ +G SP P GD L K++G +T + + +++ ++RP++LHF+G
Sbjct: 3 VSIFAGEVCRSWKFEDREGIKHEVSLWHHPLTGARAAMVDHEELEGSLGTSSVFH--AARTSMPF--QAGSA----HGIISINRASL-GFEYACSVDGILVPEATTAQSREKIPGYATRFNPSEDEIQTASYTSRVESYATSRDHAQPTLAIAWYCVATFETRSGRELTRVHRRFRDFVELDESIQAAFAGHHMLSSVPPLPSKRFKLVQDHLDSAFLESRRHELDDYVRRLCAVPRVWATPAMKPFFGLADGAREYSIIFSHRTLGFTVGKCGPKKSPEAGDSVYE-----PPDFPAFIASIVDTSVQENNIPVFSASAQGPSPKQELPQVGDLLSKISGRATCNLPFKTVVAAIRDSSRPIVLHFIG 357
BLAST of mRNA_C-linearis_contig11.1296.1 vs. uniprot
Match: A0A7S3M5K7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5K7_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.580e-40 Identity = 108/336 (32.14%), Postives = 176/336 (52.38%), Query Frame = 3
Query: 63 VSILDGEVNRNWQLKDSNGDKHLLSLFHDCVTGARAAMLDYEEVPGSAGTTNVFNLVAGRVDIPFSMRKGSEQALDNGCLSIVRRGLTGFSYECEVNGKLVLDTTS-VVQNTEYEYNVSMPATVDTGSRVSG--VTWYEVHTMRKADNKGTLVHRRFRDFFALHEQVGSLMKGHHLRSSLPRFPGKKSKLWTNHGDLGFVEDRRRALEQYVKTLLQLPHVSTLDSTRAFLGMVGNLREFSVPWEGQEFGVTLKRASEVAGGRLAAGGATGSPDGCAGAPPVITSVKGKGKSPPGVYPGDRLLKVNGDSTELISLEAAWSSVARATRPVMLHFLGPI 1061
VS+ +G++ R W + KH+L+L+HD ++G R+AMLDY+E+ GS G +++ G I F++ G + I R G T F Y C +N + + + T V +N + + ++ TV T S + WY V T R D + VHRRFR+F L+ Q+ MKGHH+R LP P K K +T+H D F++DR LE+++ + +PHV + +AFLG++ +RE+S+ ++ G++L G P G+ P + + K + GV PGD+L +VNG + + AA + + RP+++HF+ I
Sbjct: 16 VSVFEGQLTRTW-FYEHGEKKHVLNLYHDTISGVRSAMLDYQEIRGSLGNSSLLMDSKGH-RIFFTIENLP------GYIEIKRSGWTSFVYSCCINDRDIKEATQGVPENQDVVFKPTILDTVFTVDDQSEFQIAWYVVKTTRITDGATSTVHRRFREFAELNSQIKQNMKGHHMRDVLPALPEKPLKQFTDHHDPSFIQDRCIKLERFLIAMTSIPHVGNMVCMKAFLGIMDQVREYSLAFQAPTLGLSLLPRDRQ-----------GEP----GSSPCVVGMIQKPEVCQGVLPGDQLSRVNGVPLQGATFAAAVARIKSTPRPMIVHFIQVI 328
BLAST of mRNA_C-linearis_contig11.1296.1 vs. uniprot
Match: F0YDA6_AURAN (PX domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA6_AURAN) HSP 1 Score: 170 bits (431), Expect = 1.010e-39 Identity = 122/353 (34.56%), Postives = 171/353 (48.44%), Query Frame = 3
Query: 63 VSILDGEVNRNWQLKDSNGDKHLLSLFHDCVTGARAAMLDYEEVPGSAGTTNVFNLVAGRVDIPFSMRKGSEQALDNGCLSIVRRGLTGFSYECEVNGKLVLDTTSVVQNTEY---EYNVSMPA-------------TVDTGSRVSGVTWY--EVHTMRKADNKGTLVHRRFRDFFALHEQVGSLMKGHHLRSSLPRFPGKKSKLWTNHGDLGFVEDRRRALEQYVKTLLQLPHVSTLDSTRAFLGMVGNLREFSVPWEGQEFGVTLKRAS--EVAGGRLAAGGATGSPDGCAGAPPVITSVKGKGKSPPGVYPGDRLLKVNGDSTELISLEAAWSSVARATRPVMLHFLGPI 1061
VSI GEVNR W+ D G H +SL+H +TGARAA++D+EE+ GS GT++VF+ IPF+ G + I R GFSY C +G V + TS + S PA T D S + + WY E H + + T VHRRFRDF L E + + GHH+R+S+PR P KK KL+ +H D F+E RRR L+ YV L+ +PHV F+G+ N+RE+SV + + G TL ++S E A A+ P C PV + GD L K++G +++ + RP+MLHFL +
Sbjct: 2 VSIFSGEVNRTWRFCDGGGQHHEVSLYHHPLTGARAALVDHEELEGSLGTSSVFH--GSTTTIPFACGGC------RGAIHIQRSAFFGFSYACSADGVSVPEATSATADPRRAPGHAGRSGPALRVNSCRVLAHVTTRDHASPSAPIVWYLIETHASKGDEVATTRVHRRFRDFADLDEAITGALAGHHVRNSVPRLPLKKLKLFQDHNDAAFLEARRRDLDGYVAKLVHVPHVWATPPAAPFVGVANNVREYSVVFPERTLGFTLGKSSGAESRENDFPAFVASCRPPDC----PVDIRI------------GDLLSKISGRCV---------NAIKHSQRPIMLHFLATL 321
BLAST of mRNA_C-linearis_contig11.1296.1 vs. uniprot
Match: A0A7S2UVB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVB3_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.760e-14 Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 3
Query: 63 VSILDGEVNRNWQLKD-SNGDK-HLLSLFHDCVTGARAAMLDYEEVPGSAGTTNVFNLVAGRVDIPFSMRKGSEQALDNGCLSIVRRGLTGFSYECEVNGKLVLDT 374
VS+ GE+NR W+ D GDK H+++L+HD +TG R AM+DYEE+ GS GT++V +G V+IPF G G + I + GL GF YEC V +++T
Sbjct: 2 VSLWSGELNRTWRFVDPEGGDKEHVVTLYHDTITGVRCAMMDYEEIQGSMGTSSVLMSSSG-VNIPFIA--GGRHI---GRIHIAKDGLLGFRYECWVGNTRLVET 101
BLAST of mRNA_C-linearis_contig11.1296.1 vs. uniprot
Match: A0A6T9YST3_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A6T9YST3_BIGNA) HSP 1 Score: 83.2 bits (204), Expect = 5.890e-14 Identity = 71/256 (27.73%), Postives = 105/256 (41.02%), Query Frame = 3
Query: 78 GEVNRNWQLKDSNGDKHLLSLFHDCVTGARAAMLDYEEVPGSAGTTNVFNLVAGRVDIPFSMRKGSEQALDNGCLSIVRRGLTGFSYECEVNGK----LVLDTTSVVQNTEYEYNVSMPATVDTGSRVSGVTWYEVHTMR--KADNKGTLVHRRFRDFFALHEQVGSLMKGHHLRSSLPRFPGKKSKLWTNHGDLGFVEDRRRALEQYVKTLLQLPHVSTLDSTRAFLGMVGNLREFSVPWEGQEFGVTLKRASEV 827
G V RNW++ D G+ H + L H T + LD EEV T + P S G L+ + GF+Y+C +G+ LV DT E+ +P + S S + +Y+V + ++ +RF DF L V S GH L S+LP P K KLWT+H + FV+ RR L +Y+ L + V F +F V E E + K A+++
Sbjct: 9 GWVIRNWRI-DVGGETHWIQLRHYTPTASFELFLDGEEVASERKVTKME---------PISFSIGGADGKVTPSLATYSQITKGFTYKCTFDGQKIPELVFDTQQPESLCEHIKARLLPCAMIRKSGESKIVYYKVEVTNGDPLQKETYVLKKRFSDFEKLDHLVRSSFSGHQLMSNLPPKPSKSVKLWTDHLEKSFVQQRRGELNRYLTKLFNVKKVCANPDFANFFRKPTEEDKFHVDEETDEPDSSKKEAAKI 254 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1296.1 >prot_C-linearis_contig11.1296.1 ID=prot_C-linearis_contig11.1296.1|Name=mRNA_C-linearis_contig11.1296.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=641bp MAQKVSILDGEVNRNWQLKDSNGDKHLLSLFHDCVTGARAAMLDYEEVPGback to top mRNA from alignment at C-linearis_contig11:2352132..2360466+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1296.1 ID=mRNA_C-linearis_contig11.1296.1|Name=mRNA_C-linearis_contig11.1296.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8335bp|location=Sequence derived from alignment at C-linearis_contig11:2352132..2360466+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:2352132..2360466+ >mRNA_C-linearis_contig11.1296.1 ID=mRNA_C-linearis_contig11.1296.1|Name=mRNA_C-linearis_contig11.1296.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3846bp|location=Sequence derived from alignment at C-linearis_contig11:2352132..2360466+ (Chordaria linearis ClinC8C monoicous)back to top |