mRNA_C-linearis_contig11.1284.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1284.1 vs. uniprot
Match: A0A6H5L1X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X4_9PHAE) HSP 1 Score: 875 bits (2262), Expect = 4.010e-294 Identity = 618/1283 (48.17%), Postives = 709/1283 (55.26%), Query Frame = 3
Query: 204 MPAVEVKVSRFTEHPS-GCTVYECVVGLPQTRQVWLVFRRYREFVALRQRLKSACRGHHQKHPAPPARGDTKSYAPAKRLSGR----VGSTAGPAASEVGLAVGAGNEAGWIGAGGASASSALITSVETILSECRFPSRLALGRSFSLKQERRKALHAFLVALAQLRPLPRAVARFLGVVENDRMALDQCGNYILVMQVDKVLPMPPCRELDAGVPNKRLLTAQD-------------GSNADVRNQPPSASEDPQAATGVLVA--QEEEGKAGE-DNVPAXXXXXXXXXXXXXGGS-----GDSGDEPPLVAEGVVPAASA----LAEAANSGAGRYQRRP--------SVGSRAWAGVVRTVGVVEMAVS-----SDTEDPTDSESG---------------------------SDSETEYRDN--IGDDSVSGDKNRGLKTTGPDAAG---AGVDEGGLNRGSGEGGNGGVSGGVDERHVLVAAVSSIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGDDSDYAGAKNMMAWRDGDETDGWSMVASEEGDADDEGDXXXXXGARVAGGDECAAGETGCREEKQEREGERGERMVQWEFVNGYLEEVVVKGVGRLDLSVGMGASVASGTHRGGNAGXXXXXXXXXXXXXXXDGGMSLLPLSEEERDVRLAELMSFGVDLPNYMLINLLRFKDWGPTAATALYQDLVAAGNGQLNAVAPGTPVRGIANGGNTCYIDSLLFAMFATLDAFDWLLFKPLPPTDPTQ--VKLLQKHLRFFVNQLRGGATVPREHSNLIRNHLRICGWQGGPSSQEDVTELFTFLVCLLRCPALPLSEALFHGGKGEPGDSRISTERALFLALPDEEKEP-DRNKTKSLSPTRSRKAGSSAYHSGSRSPPRRRMDFSLGESQGAGPVA-----SAAIRDGSKDAGGGGVAPGVTLEQILMHNFHNNRVEGLRRTISGEKGSQPVDAWRMVSMLPFYALSGEHDGDSDPTNDKHFDTIMLPMVLKRYEAPDPAATPATSXXXXXXXXXXX-------RRSRRKVVVPHRLDVSNFMAPSAGAQGGIVEDHGGRFVLVLRSAVCHLGGESVSKGHYVAYAADREETSSTTADVKAKSSRGGGKKLGSEGPPQSTAAHGEKDMAKPGANNSGSQDSVTWLRLDDLKESPAGRGFVERLDGVREAHEVFSEDLGFHSYMLFYELVPLNLDDADKAQVKETLAYMETATDYMLAEQLNLAEQLAGLPARGGARRAGGVGGTA---SFCPVS 3773
MP V VKVS F +HP+ G T+YEC V LP TRQVW+V RRYREFVALRQ LK+ C+ + QK PAP +RG KS+ PA + +G+ G G +A S+ LI S+ET+L C+FPSR+ALGRSFSLKQERRKALH+FL AL LRPLP VA FLG+VEN+R+ALDQ G+Y+ VM + VLPMPP A +R D + D R P AAT LV EG+A E +VPA G PL + A A L++ +S + R + P S GSRAW G+ RTV + A S TEDPTDSESG D +TE R + G + G+ G D A A G + G GG+GG GGV + + AV S + T ++ VA G D XXXXX R++QWEF+NG+L EVV K VGR L G A G+ GG+ +GG+ PLS+EERDVR+AELMSFGVDLP ML+ LLR+KDWGP AATALYQ LVAAG G L V PG PVRG+ NGGNTCYIDSLLFAMFATLDAFDWLLFKPLP TDP + VKLLQKHLRF VNQLR GATVPREHSNLIR HLR CGWQGG S+QEDVTELFTFLVCLLRCPALPLSEALFHGG + GDSRISTERALFLALP+ EKE DR + KSLSPTR A + + P S R KD+GG G A VTLEQILMHNFH+NRVEGLRR++SGEKGSQPVDAWRMVSMLPFYALSGEHDGDSDP+NDKHFDTIMLPMVLKRYE P P TS +SRR+V+VPHRLDVSNFMAPSAGA+G GRFVLVLRSAVCHLGGESVSKGHYVAYAADR K ++ K G G + A G + + SQDSV WLRLDDL E P GRG+VE+LD V EA+ +FSEDLG HSYMLFYELVPLNLDDA KAQ+KE LA MET DY LA QL+L E+ A RG ++ GG G CPVS
Sbjct: 1 MPLVTVKVSSFLKHPAAGHTLYECRVELPHTRQVWVVHRRYREFVALRQHLKTVCQRYRQKKPAPSSRGG-KSH-PANKPTGQGTAPSGVRGGVSAXXXXXXXXXXXXXXXXXGSRPPGSAELIESIETVLFVCKFPSRIALGRSFSLKQERRKALHSFLEALVFLRPLPNKVASFLGLVENNRLALDQNGDYVRVMHTETVLPMPPSPAFHAAARTRREKVVADVTPRGGEEDNAAVAGDDDPRGITPGLRPSKAAATKTLVVGVASAEGRAEEGSDVPAAAAEVATGCSRSSXXXXXXXXGRRQASLPLASPAAAGTAGAWGQPLSDHVDSSSPRQHQPPRFRQQEQRSTGSRAWEGL-RTVEMASQAGEGQDRWSGTEDPTDSESGXXXXXXXXXXXXXXGGPRTAKDTTHLRGDYDTEPRSSPWAGRQQQRQGADGGVAHGGADPAAVAEAVATTGLSDENRGGGGSGGEPGGVPDPPL--PAVPSPKARSPTPLVSLPRKAVP------------------------------------------TSPYAPVAKLRGGGADXXXXXXXXXXXXXXXXXXX-------------------RLIQWEFLNGFLHEVVAKVVGRQGLG---GIGSAKGSEGGGDG----------------EGGVLPSPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLERVNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARVKLLQKHLRFLVNQLREGATVPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGGNVDAGDSRISTERALFLALPEAEKETEDRKRPKSLSPTRDATAAPFLSTNSNADPAXXXXXXXXXXXXXXXXXXXXXXPSVTRRGKGKDSGGVGAA--VTLEQILMHNFHDNRVEGLRRSVSGEKGSQPVDAWRMVSMLPFYALSGEHDGDSDPSNDKHFDTIMLPMVLKRYEQPVAPTPPGTSGAGASSRASGACASVPEATKSRRRVIVPHRLDVSNFMAPSAGAKGRADNSEPGRFVLVLRSAVCHLGGESVSKGHYVAYAADRVAAGDGGRKKKGEAGGAHAAKAGEWGSKSTGWASGGGQSSLGADDGDSSQDSVAWLRLDDLHEGPGGRGYVEKLDSVHEANRLFSEDLGLHSYMLFYELVPLNLDDAGKAQMKEKLALMETQGDYELALQLDLMER-AHTDERGWSQGGGGGSGAVVITPICPVS 1195
BLAST of mRNA_C-linearis_contig11.1284.1 vs. uniprot
Match: D7FS31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS31_ECTSI) HSP 1 Score: 765 bits (1975), Expect = 1.730e-251 Identity = 582/1265 (46.01%), Postives = 672/1265 (53.12%), Query Frame = 3
Query: 192 TEVGMPAVEVKVSRFTEHPS-GCTVYECVVGLPQTRQVWLVFRRYREFVALRQRLKSACRGHHQKHPAPPARGDTKSYA--PAKRLSGRVGSTAGPAASEVGLAVGAGNEAGWIGAGGASASSALITSVETILSECRFPSRLALGRSFSLKQERRKALHAFLVALAQLRPLPRAVARFLGVVENDRMALDQCGNYILVMQVDKVLPMPPCRELDAGVPNKRLLTAQD-----GSNADVR--------NQPPSASEDPQAATGVLV--AQEEEGKAGE-DNVPAXXXXXXXXXXXXXGGSGDSGD-----EPPLVAEGVVPAASA----LAEAANSGAGRYQRRP--------SVGSRAWAGVVRTVGVVEMAVS-----SDTEDPTDSESGSDSETEYRDNIGDDSVSGDKNRGLKTTGPDAAGAGVDEG------GLNRGSGEGGNGGVS-GGVDERHVLVAAVSSIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGDD-----SDYAGAKNMMAWRDGDETDGWSMVASEEGDADDEGDXXXXXGARVAGGDECAAGETGCREEKQEREGERGERMVQWEFVNGYLEEVVVKGVGRLDLSVGMGASVASGTHRGGNAGXXXXXXXXXXXXXXXDGGMSLLPLSEEERDVRLAELMSFGVDLPNYMLINLLRFKDWGPTAATALYQDLVAAGNGQLNAVAPGTPVRGIANGGNTCYIDSLLFAMFATLDAFDWLLFKPLPPTDPTQVKLLQKHLRFFVNQLRGGATVPREHSNLIRNHLRICGWQGGPSSQEDVTELFTFLVCLLRCPALPLSEALFHGGKGEPGDSRISTERALFLALPDEEKEP-DRNKTKSLSPTRSRKAG------SSAYHSGSRSPPRRRMDFSLGESQGAGPVASAAIRDGSKDAGGGGVAPGVTLEQILMHNFHNNRVEGLRRTISGEKGSQPVDAWRMVSMLPFYALSGEHDGDSDPTNDKHFDTIMLPMVLKRYE---APDPAATPATSXXXXXXXXXXXRRSRRKVVVPHRLDVSNFMAPSAGAQGGIVEDHGGRFVLVLRSAVCHLGGESVSKGHYVAYAADREETSSTTADVKAKSSRGGGKKLGSEGPPQSTAAHGEKDMAKPGANNS-GSQDSVTWLRLDDLKESPAGRGFVERLDGVREAHEVFSEDLGFHSYMLFYELVPLNLDDADKAQVKETLAYMETATDYMLAEQLNLAEQLAGLPAR---GGARRAGGVGGTA----SFCPVS 3773
TE GMP V VKVS F +HP+ G T+YEC V LP TRQVW+V RRYREFVALRQ LK+AC+ + QK PAP +RG A P +R + +G G + S+ LI S+ETIL C+FPSR+ LGRSFSLKQERRKALH+FL AL LRPLP VA FLG++EN+R+A DQ G+Y+ VM + VLP+PP A +R D G + D P AAT L EG+A E +VPA D PL + A A L++ +S + R + P SVGSRAW GV RTV + S TEDPTDSE RG +T G D+ G R +G +GGV+ GG D V A ++ S S YA + G DG XXXXX R ER++QWEF+NG+L EVV K VGR L G G XXXXXX G+ PLS+EERDVR+AELMSFGVDLP ML+ LLR+KDWGP AATALYQ LVAAG G L V PG PVRG+ NGGNTCYIDSLLFAMFATLDAFDWLLFKPLP TDP +VKLLQKHLRF VNQLR GAT+PREHSNLIR HLR CGWQGG S+QEDVTELFTFLVCLLRCPALPLSEALFHGG + GDSRISTERALFLALP+ EKE DR + KSLSPTR A S+A + S SP ++ GE Q S R KD+GG G A VTLEQILMHNFH+NRVEGLRR++SGEKGSQ RYE AP PAA + +SRR+V+VPHRLDVSNFMAPSAGA+G + GRFVLVLRSAVCHLGGESVSKGHYVAY ADR + + K ++ K G +T + GA++ SQDSV WLRLDDL E P GRG+VERLD V EA+ +FSEDLG HSYMLFYELVPLNLDDA KAQ+KE LA MET +DY LA QL+L E+ AR GG + GG G A CPVS
Sbjct: 6 TEGGMPVVTVKVSSFLKHPAAGHTLYECRVELPHTRQVWVVHRRYREFVALRQHLKTACQHYRQKKPAPSSRGGKPHPANKPPERGTASLGVGGGVSXXXXXXXXXXXXXXXXXACSRPPGSAELIESIETILFVCKFPSRIPLGRSFSLKQERRKALHSFLEALVYLRPLPNKVASFLGLLENNRLAQDQNGDYVRVMHTETVLPIPPSPAFHAAAHARREKMVADVAPRGGEDDDAAVAGDDGPCGTTPGLRSSKAAATKTLAMGVASAEGRAEEGSDVPAAAAEVATGCSSGSXXXXSENDGRRKASLPLSSPAAAGTAGASGQPLSDHVDSSSPRQHQPPRFRQQEQRSVGSRAWEGV-RTVEMESGGGEGQDRWSGTEDPTDSEXXXXXXXXXX-------XXXXXGRGTRTAEDTTHVRGDDDTEPRSSPGAGRQQRQGADGGVAHGGADPAAVAEAVATTGLGDENRGGGGSGGEPGVIPDPPLPAVPSPKARSPTALVSPPSTAVPTSPYAPVAKLR----GGGADGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREERLIQWEFLNGFLHEVVAKVVGRQGLG-GTGXXXXX------------------XXXXXXXXGVLSSPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEVKLLQKHLRFLVNQLREGATIPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGGNVDAGDSRISTERALFLALPEAEKETEDRKRPKSLSPTRDANAAPPLSTNSNADPAASSSPATQQQQ---GEQQATARSPSVPRRGKGKDSGGVGAA--VTLEQILMHNFHDNRVEGLRRSVSGEKGSQ------------------------------------------RYEQPVAPTPAAGAFSRASGTGAAVPEATKSRRRVIVPHRLDVSNFMAPSAGAKGRADKSEPGRFVLVLRSAVCHLGGESVSKGHYVAYTADRVASGDGGGNKKGEAGVAHAAKAGEWASKSTTGWASGGGKSSIGADDGESSQDSVAWLRLDDLHEGPGGRGYVERLDTVHEANRLFSEDLGLHSYMLFYELVPLNLDDAGKAQMKEKLALMETQSDYELALQLDLMER-----ARTDDGGWSQGGGGGRGAVVITPICPVS 1187
BLAST of mRNA_C-linearis_contig11.1284.1 vs. uniprot
Match: A0A836CLH8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLH8_9STRA) HSP 1 Score: 285 bits (729), Expect = 3.960e-77 Identity = 222/644 (34.47%), Postives = 289/644 (44.88%), Query Frame = 3
Query: 1992 LSEEERDVRLAELMSFGV-DLPNYMLINLLRFKDWGPTAATALYQDLVAAGNGQLNAVAPGTP--VRGIANGGNTCYIDSLLFAMFATLDAFDWLLFKPLPPTDPTQVKLLQKHLRFFVNQLRGGATVPREHSNLIRNHLRICGWQ-----GGPS----SQEDVTELFTFLVCLLRCPALP------------------------------------------LSEALFHGGKGEPGDSRISTERALFLALPDEEKEPDRNKTKSLSPTRSRKAGSSAYHSGSRSPPRRRMDFSLGESQGAGPVASAAIRDGSKDAGGGGVAPGVTLEQILMHNFHNNRVEGLRRTISGEKGSQPVDAWRMVSMLPFYALSGEHDGDSDPTNDKHFDTIMLPMVLKRYEAPDPAATPATSXXXXXXXXXXXRRSRRKVVVPHRLDVSNFMAPSAGAQGGIVEDHGGRFVLVLRSAVCHLGGESVSKGHYVAYAADREET---SSTTADV------------KAKSSRGGGKKLGSEGPPQSTAAHGEKDMAKPGANNSGSQDSVTWLRLDDLKESPAGRGF-------VERLDGVREAHEVFSEDLGFHSYMLFYELVPLNLDDADKAQVKETLAYMETATDYMLAEQLNLAEQ 3695
LSE+++ +R+A+L S V L L+ LLR DW A ALYQ+LVAAG G L V P P VRG NGGNTCY+DSLLFAMFA AFDWLL KPL TDP + LLQ +LRFFV Q+R GA VP +H+N+IR L CGW GG S SQ+DV+EL+ FL+ L R P LP LSE LFHGG DS++ ERAL L+LP PR +D AG A V LEQ+L +N ++RVEGLRR +SG+ + V AW+ V +LPFYAL E + + H +MLP+VLKRY+ R ++ V++P++LD S+F++ A+ G FVLVLRSAVCH GG S+ GHYVAYA+ T ++T D KA G + + + GE+ A + + WL LDDL V L E F E+L +YMLF+ELV DA L + + D +A++L + E+
Sbjct: 275 LSEDDQRLRMAQLASLHVAGLGEAELVLLLRHCDWSAQRAAALYQELVAAGKGFLEPV-PAAPERVRGATNGGNTCYLDSLLFAMFACTSAFDWLLMKPLRRTDPASLHLLQMNLRFFVGQMRRGALVPGDHANVIRRCLVGCGWGTAAGVGGDSGALHSQQDVSELYGFLLSLFRAPTLPAVQLLRAALLFRRGASRCGAAHMXXXXXXXXXXXXXXXXXXXLSERLFHGGVSTDYDSKLGGERALHLSLP----------------------------------PRAELD-----------------------AG----ASSVALEQVLRYNLFDSRVEGLRRQVSGDLSERQVAAWKQVLLLPFYAL--EEPASAQEEHAVHHGRVMLPVVLKRYQLQQRDGGRGGGKGDAAGGLVHVR-NQLPVIIPNKLDFSDFVSDGDAARAG-------DFVLVLRSAVCHRGGASLQSGHYVAYASAAAPTHVAATTVTDFRKAAXXXXQQPQKAPFDMAGAAAMETAAAASDASPSGEQATLPAAAAETATPFGCPWLLLDDLMXXXXXXXXXXXXXTRVAALSSPPELAHAFGEELPVCAYMLFFELV-----DARGGAGGNVLQGLRESADLAMAQRLQVEEE 841
BLAST of mRNA_C-linearis_contig11.1284.1 vs. uniprot
Match: A0A261Y7V0_9FUNG (USP domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y7V0_9FUNG) HSP 1 Score: 164 bits (416), Expect = 3.590e-39 Identity = 139/443 (31.38%), Postives = 189/443 (42.66%), Query Frame = 3
Query: 2064 LINLLRFKDWGPTAATALYQDLVAAGNGQLNAVAPGTPVRGIANGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPPTDPTQVKLLQKHLRFFVNQLRGGATVPREHSNLIRNHLRICGWQG-----GPSSQEDVTELFTFLVCLLRCPALPLSEALFHGGKGEPGDSRISTERALFLALPDEEKEPDRNKTKSLSPTRSRKAGSSAYHSGSRSPPRRRMDFSLGESQGAGPVASAAIRDGSKDAGGGGVAPGVTLEQILMHNFHNNRVEGLRR----------------------TISGEKGSQP------VDAWRMVSMLPFYALSGEHDGDSDPTNDKHFD-TIMLPMVLKRYEAPDPAATPATSXXXXXXXXXXXRRSRRKVVVPHRLDVSNFMAPSAGAQGGIVEDHGGRFVLVLRSAVCHLGGESVSKGHYVAYAADR 3287
+I LL+ DW AA ++++ A G L + P + G N T CYIDSLLFAMF +L AF+ +LF T + K LQ LR FVN LR G V + + +R L CGW G G +QEDVTELF FL R P LP+ LFHG + D R++TER L L++P S AG G VTLE ++ +F+NN V G++R T+SGEK P V AW+++ +LPFY S E S P + D T+MLPM LKRYE +R R +++P + +S F+ + + + V VLRS +CH G +S + GHYVA++A R
Sbjct: 96 VILLLKRNDWNSDAAIQEVKNIMDAEEGVLVEINPDVTLVGAENEMLTSCYIDSLLFAMFVSLIAFEPMLFVE---TSDAETKRLQTLLRLFVNNLRSGKLVRVDAVHELRVQLLNCGWTGLDRVHGVPTQEDVTELFLFLTNKFRLPYLPVQVRLFHGANVDADDDRMTTERMLSLSIP------------------------------------------------------------STIAGTGP----VTLESLIAEHFYNNVVTGIKRNVDSTSMSASSIDKSSYFMVDTTLSGEKKRPPKQREMLVSAWQVLELLPFYVTSNEQGETSLPHAGEFSDKTLMLPMALKRYE---------------YDMYGRSKRIPRDILIPSEIFLSQFVGETLETCPDCQKPL--QHVAVLRSVICHQG-DSPNAGHYVAFSARR 453
BLAST of mRNA_C-linearis_contig11.1284.1 vs. uniprot
Match: A0A397G3K6_9GLOM (USP domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397G3K6_9GLOM) HSP 1 Score: 157 bits (396), Expect = 9.950e-37 Identity = 112/350 (32.00%), Postives = 157/350 (44.86%), Query Frame = 3
Query: 1998 EEERDVRLAELMSFGVDLPNYMLINLLRFKDWGPTAATALYQDLVAAGNGQLNAVAPGTPVRGIANGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPPTDPTQVKLLQKHLRFFVNQLRGGATVPREHSNLIRNHLRICGWQG----GPSSQEDVTELFTFLVCLLRCPALPLSEALFHGGKGEPGDSRISTERALFLALPDEEKEPDRNKTKSLSPTRSRKAGSSAYHSGSRSPPRRRMDFSLGESQGAGPVASAAIRDGSKDAGGGGVAPGVTLEQILMHNFHNNRVEGLRRTISGE-KGSQPVDAWRMVSMLPFYALSGEHDGDSDPTNDKHFDT--IMLPMVLKRY 3023
E + D L G L + LL DW +DL A G + + + G N NT CYIDSLLFAMFA +FD +LF + T+V+ LQ HLR FVN+LR G + +R L CGW G G ++QEDV+ELF FL CL P LPL LFHGG +P D R+ TER + +A+P + P K V+LE+ LM++F +N V G++R ++ + V AW+++ +LPFY+ +G G++ ++ HF T +ML +VLKRY
Sbjct: 65 ESKVDQLRTYLEELGNPLETSQIETLLERNDWNVAEVAEYCKDLCEAEEGLIADLQKNDVMIGAENDQNTSCYIDSLLFAMFARTQSFDGMLFAQ---PENTKVRDLQTHLRLFVNRLRKGKFMSAYMIKQLREQLLNCGWIGKNDAGHTTQEDVSELFLFLSCLYELPYLPLGMHLFHGGNKDPNDERVVTERLIQVAIPGD---PHDEKP-------------------------------------------------------------VSLEEALMNHFQDNIVSGIKRNLTDDINHKSEVSAWQVLKLLPFYS-AGNEQGENIKASESHFPTKNLMLQLVLKRY 346
BLAST of mRNA_C-linearis_contig11.1284.1 vs. uniprot
Match: A0A433PUY0_9FUNG (Ubiquitin carboxyl-terminal hydrolase-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PUY0_9FUNG) HSP 1 Score: 147 bits (370), Expect = 4.600e-33 Identity = 133/468 (28.42%), Postives = 187/468 (39.96%), Query Frame = 3
Query: 2040 GVDLPNYMLINLLRFKDWGPTAATALYQDLVAAGNGQLNAVAPGTPVRGIANGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPPTDPTQV--KLLQKHLRFFVNQLRGGATVPREHSNLIRNHLRICGWQG-----GPSSQEDVTELFTFLVCLLRCPALPLSEALFHGGKGEPGDSRISTERALFLALPDEEKEPDRNKTKSLSPTRSRKAGSSAYHSGSRSPPRRRMDFSLGESQGAGPVASAAIRDGSKDAGGGGVAPGVTLEQILMHNFHNNRVEGLRRTIS---------------------------------GEKGSQP-----------VDAWRMVSMLPFYALSGEHDGDSDPTNDKHFDT--IMLPMVLKRYEAPDPAATPATSXXXXXXXXXXXRRSRRKVVVPHRLDVSNFMAPSAGAQGGIVEDHGG--RFVLVLRSAVCHLGGESVSKGHYVAY 3275
GV ++ + LL DW A +DL+ A G L A + G N T CYIDSLLFAMF F+ PL + P + + LQ +R F+N+LR G V +R L CGW G G SQED +ELF FL L + P LP LFHG + D R+ TER + L++P D SL + A + K ++LE IL+ +F+NN + G++R ++ EK P V AW+++ +LPFY+ + E GD + + F ++LP+VLKRY R R V VPH +++S F++ G + E G R+V+ LRS VCH G ES + GHY+AY
Sbjct: 67 GVRSEHHQVQELLERNDWELKKAIEEVRDLLDADEGLLVAFDREKTMLGAENDEYTSCYIDSLLFAMFVPFSTFE-----PLLHSSPANLDARRLQTSIRLFINRLRSGKLVTTRTVRQLREDLARCGWNGRDLRSGNFSQEDTSELFLFLTDLFQLPYLPFQIKLFHGADADNDDDRLMTERMVTLSIP------------------------------------AATDVSLSK--------RTASLESKKP---------ISLEAILVEHFYNNMITGIKRHVATEGTKEESERAKDEGEDDISEKIPLAEESPNHFSEKPPLPTQTATSTAEIAVSAWQVLELLPFYSGTNEQ-GDRVQQHTREFPDRQMILPLVLKRYA---------------YDAYGKASRIHRDVFVPHEINISKFVS---NRDGEVCEVCGNPLRYVMELRSVVCHKG-ESPNAGHYIAY 456
BLAST of mRNA_C-linearis_contig11.1284.1 vs. uniprot
Match: A0A433Q8L8_9FUNG (Ubiquitin carboxyl-terminal hydrolase-domain-containing protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q8L8_9FUNG) HSP 1 Score: 142 bits (358), Expect = 6.270e-32 Identity = 140/497 (28.17%), Postives = 195/497 (39.24%), Query Frame = 3
Query: 1980 SLLPLSEEERDVRLAELMSFGVDLPNYMLIN-LLRFKDWGPTAATALYQDLVAAGNGQLNAVAPGTPVRGIANGGNT-CYIDSLLFAMFATLDAFDWLLFK-PLPPT--DPTQVKLLQKHLRFFVNQLRGGATVPREHSNLIRNHLRICGWQG-GPSS----QEDVTELFTFLVCLLRCPALPLSEALFHGGKGEPGDSRISTERALFLALPDEEKEPDRNKTKSLSPTRSRKAGSSAYHSGSRSPPRRRMDFSLGESQGAGPVASAAIRDGSKDAGGGGVAPGVTLEQILMHNFHNNRVEGLRRTI-----------------SGEKGSQPV------------------------------------DAWRMVSMLPFYALSGEHDGDSDPTNDKHFDT--IMLPMVLKRYEAPDPAATPATSXXXXXXXXXXXRRSRRKVVVPHRLDVSNFMAPSAGAQGGIVEDHGGRFVLVLRSAVCHLGGESVSKGHYVAY 3275
+L P E + + L+ + P Y + LL +W AT +DL+ A G L + G N T CYIDSLLFAMF F+ LL P T P + LQ +R FVN+LR G V +R L CGW+G P S QED +ELF FL LL P LP LFHG + D R+ TER L L++P PD KS ++LE IL+ +F+NN V G++R + SG+ S+ V AW+++ +LPFY+ E GD + + F ++LP+VLKRY + R +R V +PH +++SNF++ G + V + R+V+ LRS VCH G +S + GHYVAY
Sbjct: 44 ALTPDQEAKIETLTNYLLEYVGVRPEYHQVQTLLGQNNWELKEATEEIKDLLDADEGLLVPFDNRRIMLGAENDEYTSCYIDSLLFAMFIPFSTFEPLLLSTPAVSTFVKPLDARRLQTSIRLFVNRLRSGKLVTTRIVRQLREDLACCGWKGRDPRSRAFTQEDTSELFLFLTELLELPYLPFQIRLFHGANADNDDDRLMTERMLTLSIPT----PDAASPKSP----------------------------------------------------------ISLESILVEHFYNNMVTGIKRQVAIQASGARTAKEKERAASGDDISEKVPFLDSENPALSVDPALSSSXXXXXXXXXXXTAEVAVSAWQVLELLPFYSGINEQ-GDYVHQHTREFPDRRMILPLVLKRYAYDN---------------YGQASRIQRDVFIPHEINISNFVSKDDGREVCEVCGNPLRYVMELRSVVCHKG-DSPNAGHYVAY 461
BLAST of mRNA_C-linearis_contig11.1284.1 vs. uniprot
Match: A0A1X2HU22_SYNRA (USP domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HU22_SYNRA) HSP 1 Score: 142 bits (359), Expect = 8.500e-32 Identity = 132/468 (28.21%), Postives = 193/468 (41.24%), Query Frame = 3
Query: 2028 LMSFGVDLPNYMLINLLRFKDWGPTAATALYQDLVAAGNGQLNA--VAPGTPVRGIANGGNTCYIDSLLFAMFATLDAFDWLLFKPLPPTDPTQVKLLQKHLRFFVNQLRGGATVPREHSNLIRNHLRICGWQG-----GPSSQEDVTELFTFLVCLLRCPALPLSEALFHGGKGEPGDSRISTERALFLALPDEEKEPDRNKTKSLSPTRSRKAGSSAYHSGSRSPPRRRMDFSLGESQGAGPVASAAIRDGSKDAGGGGVAPGVTLEQILMHNFHNNRVEGLRRTI-----SGEKGSQP----------------VDAWRMVSMLPFYALSGEHDGDSDPTNDKHF--DTIMLPMVLKRYEAPDPAATPATSXXXXXXXXXXXRRSRRKVVVPHRLDVSNFMAPSAGAQGGIVEDHGGRF--VLVLRSAVCHLGGESVSKGHYVAYAADREETSSTTADVKAKSSR 3335
L+ FG+++ + LL++ DW A D AA G L+A A T + +GG +CYID+LLFAM+ TL AFD LL + P D + LQ LR F+N +R G V + +R L+ W G G SQED +EL FL P LP LFHG + D R++T+R L L +P G + + LE IL +F+++ V G+RR + + S P V+AW+++ +LPFY+ E + N F ++LP++LKRY+ D + + +R+V VP + + F+ +AG I + G + V+ LRSAVCH G S GHYVAYA +E + D AK+ R
Sbjct: 53 LLHFGLEIEFERVRALLQYNDWDLKRAMTDLDDCQAAHVGLLHAPPTASQTLLGCENDGGTSCYIDALLFAMYITLTAFDPLLTCEVSP-DQVAKRKLQISLRLFINVMRQGRLVRQHMVARLRQALQDAAWHGRNPRTGRWSQEDASELLLFLTETFDLPYLPFQTRLFHGASRDVDDDRVTTDRVLSLPIPP------------------------------------------------------------------GSSRNIQLESILFDHFYDSIVTGVRRVVEPSSPTSMSSSPPTKKQAFLDDMEGEGVAVNAWQVLELLPFYSGMNEQGELIESQNRGSFPDSRMVLPIILKRYQFNDRGS---------------YVKDQRRVQVPASMQFNQFLNRNAGQP--ICDTCGQKVEGVMRLRSAVCHKGSTPTS-GHYVAYACTKEGDTWFKLDDMAKTQR 435
BLAST of mRNA_C-linearis_contig11.1284.1 vs. uniprot
Match: A0A397V7P2_9GLOM (Ubiquitin carboxyl-terminal hydrolase-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397V7P2_9GLOM) HSP 1 Score: 141 bits (356), Expect = 1.170e-31 Identity = 109/363 (30.03%), Postives = 162/363 (44.63%), Query Frame = 3
Query: 1983 LLPLSEEERDVRLAELMSF----GVDLPNYMLINLLRFKDWGPTAATALYQDLVAAGNGQLNAVAPGTPVRGIANGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPPTDPTQVKLLQKHLRFFVNQLRGGATVPREHSNLIRNHLRICGWQGGPSS----QEDVTELFTFLVCLLRCPALPLSEALFHGGKGEPGDSRISTERALFLALPDEEKEPDRNKTKSLSPTRSRKAGSSAYHSGSRSPPRRRMDFSLGESQGAGPVASAAIRDGSKDAGGGGVAPGVTLEQILMHNFHNNRVEGLRR-----TISGEKGSQPVDAWRMVSMLPFYALSGEHDGDSDPTNDKHFDT--IMLPMVLKRY 3023
L+ + E++ ++ +L ++ G L L NLL W DL+ A G ++ + + G N T CYIDSL+FAMFA +FD LLF + P + + LQ +LR FVN+LR G + +R L CGW G + QED +ELF FL CL P LPL LFHGG +P D R+ TER + +A+P + P + ++LE++L+ +FH+N V G++R T ++ PV AW+++ +LPFY+ S E G+ + HF T ++LP+VLKRY
Sbjct: 40 LVEFTVTEQESKIDQLRTYLEELGHPLGTLQLENLLEKNSWNVMEVADYCLDLIEAEEGLVSDIQNDIIMLGAENDRFTSCYIDSLMFAMFARTRSFDGLLF--IQP-EGINARSLQTNLRLFVNRLRKGKYISAYMVKQLRECLFDCGWIGKDENENPTQEDSSELFLFLSCLYELPYLPLGIHLFHGGSKDPNDERVITERLIQVAIPGD--------------------------------PHDEIP--------------------------------ISLEEVLITHFHDNVVSGIKRFSADDTDETKQTEIPVSAWQVLKLLPFYSASNEQ-GERTNAIESHFPTKNLILPLVLKRY 334
BLAST of mRNA_C-linearis_contig11.1284.1 vs. uniprot
Match: A0A1C7NBE2_9FUNG (USP domain-containing protein n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NBE2_9FUNG) HSP 1 Score: 141 bits (356), Expect = 1.970e-31 Identity = 129/439 (29.38%), Postives = 205/439 (46.70%), Query Frame = 3
Query: 2037 FGVDLPNYMLINLLRFKDWGPTAATALYQDLVAAGNGQLNAVAPGTPVRGIANG-GNTCYIDSLLFAMFATLDAFDWLLFKPLPPTDPTQVKLLQKHLRFFVNQLRGGATVPREHSNLIRNHLRICGWQG----GPSSQEDVTELFTFLVCLLRCPALPLSEALFHGGKGEPGDSRISTERALFLALPDEEKEPDRNKTKSLSPTRSRKAGSSAYHSGSRSPPRRRMDFSLGESQGAGPVASAAIRDGSKDAGGGGVAPGVTLEQILMHNFHNNRVEGLRRTISGEKGSQPV--DAWRMVSMLPFYALSGEHD-------GDSDPTNDKHFDTIMLPMVLKRYEAPDPAATPATSXXXXXXXXXXXRRSRRKVVVPHRLDVSNFMA-----PSAGAQGGIVEDHGGRFVLVLRSAVCHLGGESVSKGHYVAYAADREET 3296
F + L + +L N+L +W + A D A +G L + P+ G N G +CYIDSLLFAMF + FD LL +PP ++KL Q R FVN+LR G + + + +R L+ W G G +QED +ELF F+ P LP LFHG + D R+ T+R L L++PD+++ R + + +++ + + RR+++ S E +G I + VA T++ ++ + R+ +RR ++ Q V AW+++ +LPFY+ + E G S P D H ++LP+VLKRY + + +R+V +P +D + F+ P G +V+ + L L+SAVCH G +S GHYV+YA R+ET
Sbjct: 45 FDIQLSSDILENILEANEWDSKRSIADLVDYEEASHGILISPKLDHPLSGAENDRGTSCYIDSLLFAMFVSNTTFDPLLTYDIPPDQDNKIKL-QTLFRLFVNKLRKGRLINADTVHWLRRVLQEANWNGQDEAGHWTQEDASELFMFITETFELPYLPFQIRLFHGANKDSDDDRVMTDRTLSLSIPDDDRAEVRLEDILVD----------YFYNSTITGIRRQVNHS--EEEG--------IHEN--------VAASPTIQSLMEEKPNLERLL-IRRPSHLDQPQQQVAVTAWQVLELLPFYSATNEQGISISSQLGASFP--DTH---MILPIVLKRYRYDHAGGS---------------HKIKRRVEIPVTIDFNRFVNQNVDDPVCPTCGRLVD-----WTLCLKSAVCHKGDSPLS-GHYVSYA--RKET 425 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1284.1 >prot_C-linearis_contig11.1284.1 ID=prot_C-linearis_contig11.1284.1|Name=mRNA_C-linearis_contig11.1284.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1211bp MEKKRACNSGSVSDSPTEVGMPAVEVKVSRFTEHPSGCTVYECVVGLPQTback to top mRNA from alignment at C-linearis_contig11:2268173..2280813- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1284.1 ID=mRNA_C-linearis_contig11.1284.1|Name=mRNA_C-linearis_contig11.1284.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=12641bp|location=Sequence derived from alignment at C-linearis_contig11:2268173..2280813- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:2268173..2280813- >mRNA_C-linearis_contig11.1284.1 ID=mRNA_C-linearis_contig11.1284.1|Name=mRNA_C-linearis_contig11.1284.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7266bp|location=Sequence derived from alignment at C-linearis_contig11:2268173..2280813- (Chordaria linearis ClinC8C monoicous)back to top |