mRNA_C-linearis_contig11.1280.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1280.1 vs. uniprot
Match: D8LMZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ1_ECTSI) HSP 1 Score: 1771 bits (4588), Expect = 0.000e+0 Identity = 972/1171 (83.01%), Postives = 1040/1171 (88.81%), Query Frame = 2
Query: 26 MGRGRGRGDQNRVKGGRGGYSGAAKSNGGIFGGGVADGKPLTSGQVGLDTHAVAESTRITLDKQLRVFRDDEDATSLAFPPDLDNTSRKFIHEAVKRLGLDSKSRGKGESRYITVSKKKGSGDG-GEGAELPPILQLGHARDSALETYFSRRPPAAREVETVMSSAVGGGMHAAAELVTQKRHKATLLDKQAKAMASPGASAQELQRRASMYNAAQNKRKRAAGHQRMSSFRQGLPAWGYRDTIVDMVRDHQACLVSGETGCGKSTQVPQFLLDDPVIGPSCKIVCTQPRRISAIAVAERIAEERGESIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLARDPMLKEYTHVLIDEVHERDRNSEFLLIVLRGLLTKRPDLRLVLMSATLQQGKYSGYFGGCPITTIGARTFPVQAFFLEDVLVQTAYLKEIGADAGGXXXXXXXLLGGTGLEGLEEAVGEESFKCALCGKAGFSRSAEELGTHAAMCFGTAGLDPALEGFSDAGLELLMSEMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGESAVVSGSHGVGESGSADGEVDMSQFEAGSVGGDPEVREEEGEEEDDDGVFGTEEDEMSGIQDALASQRWDGRGAFRAERAAAKTGRAEDLLTRYQFAFDDEAVDYELVECLLRYICRSAYEDGAVLVFLPGWDDITRLGEFLRQSPHFSDERKFQILPLHSGVPTVKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSSLRHDSLREHQESELLRTPLEEVVLQAKMLGLANGGPGDPDSAAGFLSQAIDAPPELSLRNAVQLLQSLGALDDQEELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTAACAMTYKNPFMLPINAAQRKEAKSAKIALAQGSESDLIALLRALEGHADAKAKGGAGAAASLAHRGHLSAPTLGMIWEICGQVARELKGSGLPSAYDWGNPCNSNSRDVSLLSSVLCAGLYPNVAMRRPGGTNFKTLGGHTARLHMSSINAARSQRLAQANSGRQTEFIAFGEMTRTATNFVMSNTSPVSPLALLLLCGNLRAEELFFAQEEEDEELYDAQELSIRGAGGAAVGGR-GGGPTELLLELDDWVQFRL 3532
MG+GR RGD + +GGRG +SG + NGG G G DG+ LT+GQVGLD HAVAESTRI L+KQL FRDDEDAT LAFPP+LDNTSRKFIHEAVKRLGL SKS GKG++R ITV K G GA+ PP+LQLG+ARD+AL+ YFSR PP+ RE +TVMS+AVGGGMHAAAEL TQKRHKA LLD+QAKA+ SPGASAQELQRR SMYNAAQ++R+RAAGHQRMS+FRQGLPAW YRDTIV+MVRDHQACLVSGETGCGKSTQVPQFLLDDP IGP CKIVCTQPRRISAIAVAERIAEERGE IGGTVGYTIRLESSVSKDTQLVLMTPGILLKKL RDPMLKE+THVLIDEVHERDRNSEFLLIVLRGLL KRPDLRL+LMSATLQQGKYS YFGGCPITTIGARTFPVQAFFLEDVLVQT YLKEIGAD GG LLGG+G+E LE A G +S+ CALCGK GF RSAEELGTH AMCFGTAGLDPALEGFSD GLELL+S XXXXXXXXXX XXXXXXXXXXXXXX G +G + G G A+ E+DM+QF+A SVGGDPE EE EEE+ G EDEM G+QDALASQRWDGRGAFRAERAAAKTGRAE+LLTRYQFAFDDEAVDYELVECLLRYICRSAYEDGAVLVFLPGWDDITRLG+FLRQS HFSDERKFQILPLHSGVPT KQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFS+LRH+SLREHQESELLRTPLEEVVLQAKMLGLANGGPGDPDSAAGFLSQAIDAP ELSLRNAVQLLQSLGALD+ EELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALT+ACAMTYK+PF+LP+NAAQR++AKSAKIALAQ SESDLIALL ALE HADAKAKGGAGAAASLA +GHLSAPTLGMIW+ICGQVAREL+GSGLPSAYDW +PCNSNSRDVSLLSSVLCAGLYPNVAMRRPG TNFKTLGGHTARLHMSSINAARSQRL QANS RQTEFIAFGE+TRTA NFVMSNTSPVSPLALLLLCGNLRA++++ A+E+E E+++D QE++ GAGG GG GG ELL ELDDWVQFRL
Sbjct: 1 MGKGRDRGDSKKGRGGRGSHSGPLQGNGGKNGVGALDGESLTAGQVGLDVHAVAESTRIALEKQLHAFRDDEDATQLAFPPNLDNTSRKFIHEAVKRLGLTSKSYGKGDARDITVKKXXXXXXXDGNGAQRPPMLQLGNARDAALKAYFSRHPPSRREADTVMSAAVGGGMHAAAELATQKRHKAALLDRQAKAVTSPGASAQELQRRTSMYNAAQSRRQRAAGHQRMSAFRQGLPAWEYRDTIVNMVRDHQACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGEKIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLKEFTHVLIDEVHERDRNSEFLLIVLRGLLAKRPDLRLMLMSATLQQGKYSEYFGGCPITTIGARTFPVQAFFLEDVLVQTDYLKEIGADTGGGGGGKG-LLGGSGVEELE-AAGTDSYSCALCGKGGF-RSAEELGTHVAMCFGTAGLDPALEGFSDEGLELLVSGAGXXXXXXXXXXXVVSGARAXXXXXXXXXXXXXXWHGSGDADAGPNVPG--GHAE-EIDMAQFDADSVGGDPEPVAEEDEEEEYLGELAAREDEMDGLQDALASQRWDGRGAFRAERAAAKTGRAEELLTRYQFAFDDEAVDYELVECLLRYICRSAYEDGAVLVFLPGWDDITRLGDFLRQSLHFSDERKFQILPLHSGVPTAKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSALRHESLREHQESELLRTPLEEVVLQAKMLGLANGGPGDPDSAAGFLSQAIDAPAELSLRNAVQLLQSLGALDEGEELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTSACAMTYKDPFVLPMNAAQRRDAKSAKIALAQESESDLIALLTALERHADAKAKGGAGAAASLARKGHLSAPTLGMIWDICGQVARELQGSGLPSAYDWRSPCNSNSRDVSLLSSVLCAGLYPNVAMRRPGATNFKTLGGHTARLHMSSINAARSQRLGQANSSRQTEFIAFGELTRTAANFVMSNTSPVSPLALLLLCGNLRAKQVYSAREDE-EKMHDTQEVATMGAGGPVGGGGVGGRGMELLFELDDWVQFRL 1164
BLAST of mRNA_C-linearis_contig11.1280.1 vs. uniprot
Match: A0A6H5JK76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK76_9PHAE) HSP 1 Score: 1399 bits (3621), Expect = 0.000e+0 Identity = 788/1072 (73.51%), Postives = 839/1072 (78.26%), Query Frame = 2
Query: 776 QACLVSGETGCGKSTQVPQFLLDDPVIGPSCKIVCTQPRRISAIAVAERIAEERGESIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLARDPMLKEYTHVLIDE-----------VHERDRNSEFLLIVLRGLLTKRPDLRLVLMSATLQQGKYSGYFGGCPITTIGARTFPVQA---------------FFLEDVLVQTAYLKEIGADAGGXXXXXXXLLGGTGLEGLEEAVGEESFKCALCGKAGFSRSAEELGTHAAMCFGTAGLDPALEGFSDAGLELLMS-------------------------EMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGES-----AVVSGSHGV-------------GESGSADG------------EVDMSQFEAGSVGGDPEVREEEGEEEDDDGVFGTEEDEMSGIQDALASQRWDGRGAFRAERAAAKTGRAEDLLTRYQFAFDDEAVDYELVECLLRYICRSAYEDGAVLVFLPGWDDITRLGEFLRQSPHFSDERKFQILPLHSGVPTVKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSSLRHDSLREHQESELLRTPLEEVVLQAKMLGLANGGPGDPDSAAGFLSQAIDAPPELSLRNAVQLLQSLGALDDQEELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTAACAMTYKNPFMLPINAAQRKEAKSAKIALAQGSESDLIALLRALEGHADAKAKGGAGAAASLAHRGHLSAPTLGMIWEICGQVARELKGSGLPSAYDWGNPCNSNSRDVSLLSSVLCAGLYPNVAMRRPGGTNFKTLGGHTARLHMSSINAARSQRLAQANSGRQTEFIAFGEMTRTATNFVMSNTSPVSPLALLLLCGNLRAEELFFAQEEEDEELYDAQELSIRGAGGAAVGGRGGGPTELLLELDDWVQFRLPIEPGRHILVLRNRLHAAFAQHMQANGRPVTGPAADTIAVANALLHEPSVAAGASNAAASNYRYRGNGGRSG 3748
QACLVSGETGCGKSTQVPQFLLDDP IGP CKIVCTQPRRISAIAVAERIAEERGE IGGTVGYTIRLESSVSKDTQLVLMTPGILLKKL RDPMLKE+THVLIDE VHERDRNSEFLLIVLRGLL KRPDLRL+LMSATLQQGKYS YFGGCPITTIGARTFPVQA FFLEDVLVQT YLKEIGAD GG LLGG+G+E LE A G +S+ CALCGK GF RSAEELGTH AMCFGTAGLDPAL+GFSD GLELL+S E RG S A VSG+ G G GS D E+DM+QF+A SVGGDPEV EE+ EEE G EDEM G+QDALASQRWDGRGAFRAERAAAKTGRAE+LLTRYQFAFDDEAVDYELVECLLR LG+FLRQS HFSDERKFQILPLHSGVPT KQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHL IKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFS+LRH+SLREHQESELLRTPLE AK+LGLANGGPGDPDSAAGFLSQAIDAP ELSLRNAVQLLQSLGALD++EELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALT+ACAMTYK+PF+LP+NAAQR++AKSAKIALAQ SESDLIALL ALE HADAKAKGGA AAASLA +GHLSAPTLGMIW+ICGQVAREL+GSGLPSAYDW +PCNSNSRDVSLLSSVLCAGLYPNVAMRRPG TNFKTLGGHTARLH+SS+NAARSQRL QANS RQTEFIAFGE+TRTA NFVMSNTSPVSPLALLLLCGNLRA++++ A+E+E E+++D QE++ GAGG G RG G ELL ELDDWVQFRLP + GR++LVLRNRLH FA +MQANGRP GPAADTIAVANALLHEPSVAAGA N + + RG GG G
Sbjct: 5 QACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLKEFTHVLIDEASDGIVSCRGDVHERDRNSEFLLIVLRGLLAKRPDLRLMLMSATLQQGKYSEYFGGCPITTIGARTFPVQASRLSTARLLTQSQQAFFLEDVLVQTDYLKEIGADTGGGGGGKG-LLGGSGVEELE-AAGADSYNCALCGKGGF-RSAEELGTHVAMCFGTAGLDPALKGFSDEGLELLVSGAXXXXXXXXXXXXXXXXXSPAGGGEPPFLLSPVSLPLPPSQVGAAAVAVYGGDTGAAAAGRGTSDANGNATVSGARGXXXXXXXGGAVTSNGWHGSGDADEGPNVPEGHAEEIDMAQFDADSVGGDPEVEEEDDEEEYL-GELAAREDEMDGLQDALASQRWDGRGAFRAERAAAKTGRAEELLTRYQFAFDDEAVDYELVECLLR------------------------LGDFLRQSIHFSDERKFQILPLHSGVPTAKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLNIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSALRHESLREHQESELLRTPLE-----AKVLGLANGGPGDPDSAAGFLSQAIDAPAELSLRNAVQLLQSLGALDEREELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTSACAMTYKDPFVLPMNAAQRRDAKSAKIALAQESESDLIALLTALERHADAKAKGGAEAAASLARKGHLSAPTLGMIWDICGQVARELQGSGLPSAYDWRSPCNSNSRDVSLLSSVLCAGLYPNVAMRRPGATNFKTLGGHTARLHVSSVNAARSQRLGQANSSRQTEFIAFGELTRTAANFVMSNTSPVSPLALLLLCGNLRAKQVYSAREDE-EKMHDTQEVATMGAGGPVGGVRGRG-MELLFELDDWVQFRLPADQGRNLLVLRNRLHTEFAVYMQANGRPAAGPAADTIAVANALLHEPSVAAGAGN---NYWTSRGGGGGRG 1038
BLAST of mRNA_C-linearis_contig11.1280.1 vs. uniprot
Match: A0A835Z8N8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N8_9STRA) HSP 1 Score: 940 bits (2430), Expect = 2.650e-314 Identity = 638/1460 (43.70%), Postives = 787/1460 (53.90%), Query Frame = 2
Query: 275 DNTSRKFIHEAVKRLGLDSKSRG----------------------------------------KGESRYITVSKKKGSGDGGEGAELPPILQLGHARDSALETYFSRRPPAAREVETVMSSAV-GGGMHAAAELVTQKRHKATLLDKQAKAMASPGASAQELQRRASMYNAAQNKRKRAAGHQRMSSFRQGLPAWGYRDTIVDMVRDHQACLVSGETGCGKSTQV----------------------------------------------------------------------------------------------------PQFLLDDPVIGPSCKIVCTQPRRISAIAVAERIAEERGESIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLARDPMLKEYTHVLIDEVHERDRNSEFLLIVLRGLLTKRPDLRLVLMSATLQQGKYSGYFGGCPITTIGARTFPVQAFFLEDVLVQTAYLKEIGADAGGXXXXXXXLLGGTGLEGLEE------AVGEESFKCALCGKAGFSRSAEELGTHAAMCFGTAGLDPALEGFSDAGLELLMSEMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGESAVVSGSHGVGESGSADGEVDMSQFEAGSVGGDPEVREEEGEEEDDDGVFGTEEDEMSGIQDAL-ASQRWDGRGAFRAERAAAKTGRAEDLLTRYQFAFDDEAVDYELVECLLRYICRSAYED------------------GAVLVFLPGWDDITRLGEFLRQSPHFSDER-KFQILPLH------------------------------------SGVPTVKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSSLRHDSLREHQESELLRTPLEEVVLQAKMLGLANGGPGDPDSAAGFLSQAIDAP----------PE-----------------------------------------------------------------------------------LSLRNAVQLLQSLGALDDQEELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTAACAMTYKNPFMLPINAAQRKEAKSAKIALAQGSESDLIALLRALEGHADAKAKGGA-GAAASLAHRGHLSAPTLGMIWEICGQVARELKGSGLPSAYDWGNPCNSNSRDVSLLSSVLCAGLYPNVAMRRPGGTNFKTLGGHTARLHMSSINAARSQRLAQANSGRQT-EFIAFGEMTRTATNFVMSNTSPVSPLALLLLCGNLRAEELFFAQEEEDEELYD-AQELSIRGAGGAAVGGRGGGPTELLLELDDWVQFRLPIEPGRHILVLRNRLHAAFAQHMQANGRPVTGPAADTIAVANALLHEPSVAAGAS---NAAASNYRYRGNGGRSG 3748
DNT RK++H K LGL SKSRG +G+SRYITV K K +G+ G ELP + +L R AL TYF P E+ VM A GGG+H AAEL Q R + T +A A+ GA EL+ R Y AAQ +R+R +Q+M RQ LPAWGY ++I++++R HQ LVSGETGCGKSTQV PQF+LDD G C I CTQPRRISAIAVAERIAEER E G VGYTIRLES++S QL +MTPG+LLKKL DPML++YTHV+IDEVHERD+++EFLLIVLR LL RP+L++VLMSATLQQGKY+ YFGGCPITTIGARTFPVQ FFLEDVL+QT YL G L L+E A +F CALCG+ F RSAEELGTH AMCFG G D G AG L + + + +++G + +G D S PE E+ E D +E +++ + + A WDG GAF A +AEDLL RYQF+FDDE VDY+L+ LLRYIC SAYE+ GAVLVFLPGWDDITR + L++ P+F+ ++ +F+IL LH SGVPT +QR+VFVRPP G RKI+LSTNIAETS+TIDDVAFV+DSGRAKE SYDPHLK+KTLVPQWVSKASA+QR+GRAGRTKAGVCFHLFS+ RH +LR+H+ESELL +PLEE+ LQAK++GLA G PG+PDS A FL +A+D P PE LS+RNAV+LLQS+GALD++E +TDLGARLA +S+DPRVGKM+LW+Y+LGCAG A+ ACAM+YK+PF+LP++AAQ++EAK+AK+ALA G+ESDL+ALLRA+EG+A A+ GG GAA + A R LSA TLGMI REL+ GLP G P N+N+ D+SLL+SVLCAGLYPNVA R PG TNF+TLGGH ++H SS+N+ R QRL++ R + +F+AFGE+TR A FVMSNT+PV LALLLLCGN+ A + E D E D AQE P EL+L LDD V P + G +LVLR RLH AFA ++A R + DT+ V ALLH+P +A A+ NAA + G GGR+G
Sbjct: 3 DNTERKYLHTMCKGLGLVSKSRGTLVLLLQLRHKVPPVTPYSTQSHAVHLRTLKTSLLAPLKFQGDSRYITVRKAKKAGNAG--GELPRLGELDLPRQVALATYFQAHPAGDEEMGAVMQLATEGGGIHTAAELAKQVRQQRT----KAAGAAASGAGEAELKTRERCYLAAQERRRRQPQYQQMLRCRQNLPAWGYCESILELIRAHQVVLVSGETGCGKSTQVNCCGDSVLARVHMHTLASLPIVQRCEYVDCAAHCGVRDRGTRIGSTSAFLPIVRLRQEYAGATVHPGRRSAGGALHDRVRAAAPHLNRCNRRNRRAAEQVPQFILDDAAQGARCMIACTQPRRISAIAVAERIAEERCEEAGAVVGYTIRLESAMSSSVQLCMMTPGVLLKKLNTDPMLQQYTHVIIDEVHERDKSTEFLLIVLRDLLPLRPELKVVLMSATLQQGKYAAYFGGCPITTIGARTFPVQEFFLEDVLLQTGYLDGAEGAQQQRSAAGRAAQAGGALPSLQELAASLAAGAAPTFACALCGRRAF-RSAEELGTHVAMCFG--GEDAG--GGGGAGATALDAVIL----------------------IKRIHSRRVHRSPQPLLLNGIELPQQDSIMEGYCDEDALPEDS----PENALEDQEPSSDLAPILEDEADITAVTGVVPAKVVWDGVGAFGMRTA---DHQAEDLLARYQFSFDDEMVDYDLIAALLRYICESAYEEPPSRAAXXXXXXXXXCEEGAVLVFLPGWDDITRQTDCLQRHPYFAGQQLRFRILQLHRHVHSARAYSYTSKSLSQARDGAAASCRLRRAAQRRSGVPTKRQREVFVRPPPGVRKIILSTNIAETSVTIDDVAFVVDSGRAKEQSYDPHLKLKTLVPQWVSKASAKQRKGRAGRTKAGVCFHLFSARRHGALRDHRESELLCSPLEELCLQAKVMGLAQGAPGEPDSIAAFLGKAMDPPHRQVLLLNCTPEGPPPVPLTLINFNLKIIIASTQHVSPHVTRARQARGHCSRASPGACLVVLACVKQHALPLYSGPHVKTMCSQRPPPPRPTPHSLSVRNAVELLQSIGALDEREGVTDLGARLAQLSVDPRVGKMMLWAYMLGCAGTAVAVACAMSYKDPFVLPMSAAQKREAKAAKLALASGAESDLVALLRAMEGYASARRGGGGHGAAHAFADRNFLSANTLGMI-------GRELQSLGLPLPTSPG-PANANAGDLSLLASVLCAGLYPNVAHRGPGATNFRTLGGHLTKVHQSSVNSGRGQRLSEPADLRGSGDFVAFGEITRNAQLFVMSNTTPVPALALLLLCGNVTAAARGGDEGEGDGEGGDDAQEE----------------PPELVLTLDDCVSLAAPRQLGERLLVLRQRLHRAFATRVRAPARSLGAAYDDTVRVVVALLHDPVIARSAAKSHNAAVALSMRVGGGGRNG 1398
BLAST of mRNA_C-linearis_contig11.1280.1 vs. uniprot
Match: W7TIW9_9STRA (Atp-dependent rna helicase dhx57 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIW9_9STRA) HSP 1 Score: 769 bits (1986), Expect = 2.640e-250 Identity = 524/1318 (39.76%), Postives = 698/1318 (52.96%), Query Frame = 2
Query: 179 AVAESTRITLDKQLRVFRDDEDATSLAFPPDLDNTSRKFIHEAVKRLGLDSKSRGKGES-RYITVSKKKGSGDGG----EGAELPPILQLGHARDSALETYFSRRPPAAREVETVMSSAVG----------------------GGMHAAAEL-----------VTQKRHKATLLDKQAKAMASPGASAQELQRRASMYNAAQNKRKRAAGHQRMSSFRQGLPAWGYRDTIVDMVRDHQACLVSGETGCGKSTQVPQFLLDDPVIGPSCKIVCTQPRRISAIAVAERIAEERGESIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLARDPMLKEYTHVLIDEVHERDRNSEFLLIVLRGLLT-KRP-DLRLVLMSATLQQGKYSGYFGGCPITTIGARTFPVQAFFLEDVLVQTAYLKEIGAD--AGGXXXXXXXLLGGTGLEGLEEAVGEES--------------------FKCALCGKAGFSRSAEELGTHAAMCFGTAGLDPALEGFSDAGLELLMSEMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGESAVVSGSHGVGESGSADGEVDMSQFEAGSVGGDPEVREEEGEEEDDDGVFGTEEDEMSGIQDALASQRWDGRGAFRAERAAAKTG-----------RAEDLLTRYQFAFDDEAVDYELVECLLRYICRSAYEDGAVLVFLPGWDDITRLGEFLRQSPHFSDERKFQILPLHSGVPTVKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSSLRHDSLREHQESELLRTPLEEVVLQAKMLGLA-----------------------------------------NGGPGDPD------------SAAGFLSQAIDAPPELSLRNAVQLLQSLGALDDQEELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTAACAMTYKNPFMLPINAAQRKEAKSAKIALAQGSESDLIALLRALEGHADAKAKGGAGAAASLAHRGHLSAPTLGMIWEICGQVARELKGSGLPSAYDWGNPCNSNSRDVSLLSSVLCAGLYPNVAMRRPGGTNFKTLGGHTARLHMSSINAARSQRLAQANS-------GRQTEFIAFGEMTRTATNFVMSNTSPVSPLALLLLCGNLRAEELFFAQEEEDEELYDAQELSIRGAGGAAV----GGRGGGPTE------------LLLELDDWVQFRLPIEPGRHILVLRNRLHAAFAQHMQANGRPVTGPAADTIAVANAL--LHEPS 3679
A++E TRI+ QL R+D ++FPP LD T RK++H ++LGL SKSRGKGE R+ITVSKK G G E + P L L + +R ++E E ++ + GG A+L L K+ + + P + L RR + + Q +R R + M R LPA + + +V+ H +VSGETGCGKSTQVPQF+LDDP +GPS K+ TQPRRISA+AVAER+A ER E++G T+GY IRLES VS+ +Q+V MTPG+LL+KL D L+E+ ++IDEVHERDRN++FLLI+LR LL +RP DLRL+LMSATLQ K S YF GCP+ TIG+ +PV+ F+LED L+QT+YL+++G AGG G EG + G E + C +CG+ GF RS EE GTH +C G A + A E + G E L +++ GE V E+ G D+S A V PE G ED G + L + GR +R RA+ G +A++ L YQ+AFDDE VDY+L+ LL YI +S Y GA+LVFLPGWDDI+RL + LRQ P F + +K +LPLHSGVP+ +QR+VF PP G RK+VL+TNIAETS+TIDDV FV+DSGR KE +YDP LK+ TL P W+SKASARQRRGRAGR +AGVCFHL S R +SL+E +ESELL TPLEE+ LQAK+LGLA NG DPD S FL +A+DAP +LS++NA+ LL +GA QE+LTDLG LA + +DPR+GKMVLW +LGC G AL ACA+ Y++PF+LP+ A + +AK AK LA G+ SD +ALL AL+G+ A A+GG AA R LS TL ++ Q+ REL G ++ S++ ++LL++VLCAGLYP VA RR G NF T A+LH SS+N R + ++ G EF+ F E+ RT + FV+SNT+PV L++ LLCG+ + + E + + + +GG+ V G G TE LL +D+W+ FR P E H+ VLR RL AF ++ ++ D + VA L L PS
Sbjct: 68 AISEETRISFTTQLNELREDSSLQEISFPPTLDKTQRKYLHALAEQLGLTSKSRGKGEGERFITVSKKPKKGPHGDEQDEDLDRYPPFHLKKESLGLLRRHLARHAVRSQEREALLQQCISRSASSEATNTCAGNPTAVERGRGGAVRVADLRDPGPTPGGRAAVPATQTGQSLSKKQQRLYDPAMEEERLVRRCAEHAEKQARRDRHPRYASMLQARGRLPAAEHAALVTRLVKTHPVVVVSGETGCGKSTQVPQFMLDDPDVGPSLKMAVTQPRRISAVAVAERVAAERMEAVGQTIGYNIRLESEVSEQSQVVFMTPGVLLRKLGGDRELREFNVIMIDEVHERDRNTDFLLIILRDLLRYQRPTDLRLILMSATLQTEKLSAYFNGCPVATIGSTCYPVREFYLEDALLQTSYLEKLGLGKGAGGDRAGQPPEQGQGKEEGSQRLGGRERAAKPRGEDPLLRTLCEAKAVYTCEMCGQRGF-RSPEEFGTHVVLCDG-APVGGAGEEGAGHGYEALEAKLL------------------------------EGLEGEDDFVPDYEDWTETPGQLGPADLSAALAKDVDA-PE------------GFVSAVEDPGEGEE--LGCEGGGGRPPYR-HRASEGEGVLFPMPGLTEVQAQEALRAYQYAFDDENVDYDLILQLLHYIDKSGYGPGAILVFLPGWDDISRLRDALRQDPDFGNAKKAWVLPLHSGVPSQQQREVFKSPPPGVRKVVLATNIAETSVTIDDVVFVVDSGRVKEKTYDPFLKLCTLQPTWISKASARQRRGRAGRVRAGVCFHLCSRRRFESLKEFKESELLTTPLEELCLQAKLLGLAPGFDPYERQAPPAKSKTKPAMNPELLAALSLEDGEGCTAEENGAEKDPDISRLEASRLEGDSIMRFLGKALDAPHDLSIKNAIDLLMQIGAFTAQEQLTDLGMTLARLPMDPRIGKMVLWGQMLGCGGAALKVACALAYRDPFVLPLTAEMKVKAKKAKQELAVGTMSDHLALLSALQGYEAALARGGQQAAFGYCDRYFLSRSTLSTALDVAKQMVRELVAMGFDASLFSNAREGSSAPSLALLTAVLCAGLYPGVACRRVGEVNFTTSCQKKAKLHQSSVNYHPGSRFTRVSTPESHRALGGGPEFLVFSEVVRTPSIFVISNTTPVPVLSVFLLCGDSKVRGIRTLLEGQSGVRRGEDATARKQSGGSLVQDNEGATGVEETENDEDDEAGLGDEALLLIDEWMTFRCPKEVALHLQVLRLRLEEAFLAFLKHPQGRLSSATQDALQVAVRLFALENPS 1337
BLAST of mRNA_C-linearis_contig11.1280.1 vs. uniprot
Match: A0A7S4N6J1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N6J1_9STRA) HSP 1 Score: 696 bits (1797), Expect = 1.830e-223 Identity = 478/1241 (38.52%), Postives = 649/1241 (52.30%), Query Frame = 2
Query: 152 SGQVGLDTHAVAESTRITLDKQLRVFRDDEDATSLAFPPDLDNTSRKFIHEAVKRLGLDSKSRGKGESRYITVSK----KK------GSGDGGEGAELP-PILQLGHARDSALETYFSRRPPAA-REVETVMSSA---------------------------VGGGMHAAAELVTQKRHKATLL--DKQAKAMASPGASAQELQRRASMYNAAQNKRKRAAGHQRMSSFRQGLPAWGYRDTIVDMVRDHQACLVSGETGCGKSTQVPQFLLDDPVIGPSCKIVCTQPRRISAIAVAERIAEERGESIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLARDPMLKEYTHVLIDEVHERDRNSEFLLIVLRGLLTKRPDLRLVLMSATLQQGKYSGYFGGCPI------------------TTIGARTFPVQAFFLEDVLVQTAYLKEIGA----DAGGXXXXXXXLL-----------------GGTGLEGLEEAV-----GEES-FKCALCGKAGFSRSAEELGTHAAMCFGTAGLDPALEGFSDAGLELLMSEMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGESAVVSGSHGVGESGSADGEVDMSQFEAGSVGGDPEVREEEGEEEDDDGVFGTEEDEMSGIQDALASQRWDGRGAFRAERAAAK----TGRAEDLLTRYQFAFDDEAVDYELVECLLRYICRSAYEDGAVLVFLPGWDDITRLGEFLRQSPHFSDERKFQILPLHSGVPTVKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSSLRHDSLREHQESELLRTPLEEVVLQAKMLGLANGGPGDPDSAAGFLSQAIDAPPELSLRNAVQLLQSLGALDDQ-EELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTAACAMTYKNPFMLPINAAQRKEAKSAKIALAQGSESDLIALLRALEGHADAKAKGGAGAAASLAHRGHLSAPTLGMIWEICGQVARELKGSGLPSAYDWGNPCNSNSRDVSLLSSVLCAGLYPNVAMRRPGGTNFKTLGGHTARLHMSSINAARSQRL---AQANSGRQTEFIAFGEMTRTATNFVMSNTSP-VSPLALLLLCGNLRAEELFFAQEEEDEELYDAQELSIRGAGGAAVGGRGGGPTELLLELDDWVQFRLPIEPGRHILVLRNRLHAAF 3589
+G+ G + H VAE RI K L R+DE+ + PPDL NT RKFIH+ +LGL SKS GKG++R I ++K KK G D E +L P L +G +AL + PP+A E E+ ++ + +GGG + A + + L D ++K + + ++ RRA + AQ +K + RM R+ LPA+ + I D + H+ ++SG+TGCGKSTQVPQFLLDD IGP+ IV TQPRRISAI+VAER+A ER E +G TVGY +RLE + S DTQL+ +TPG+LL++L P L ++T V++DEVHERD+ +EFL+I LR L+ +R DLRLVLMSAT+Q + Y+ G +I RTFPVQ FFLE+VL T ++ + G D L+ GG G +E G++S C +CG +GF EELG H A+C G G + M E+ V G +D++ G+ +EE EE D + + + L +WDG F A T E++L RYQ DDE VD L+ ++YI +S+Y A+L+F PGW +I+ L + F+D K ILPLHSG+P+ +QR+VFVRPP+G RKI+L+TNIAETSITIDDVAFV+D+GRAKE SYDPHLK TL P WVS+ASA+QR GRAGRTK GVCFHLFS RH S R ESELLRTPLEE+ LQ K L LA GGP D D FLS+A+ P S+ NA++LL LGA+D + +LT+LG L+ +S++PRVGKMV+WS+LLGCA A + AM+YK+PF+LP ++ RK A + +I L++ +ESD I +L L KG A L T+ MI ++ V+REL P + G S D + L + + AGLYPNVA R+ G +NF T+ A++H+SS+N+ + Q L Q G + EFI FGEM R +F MS T+ VSPL L+LLCG LR + E D ++ S+ L +DDW+ F + ++VLR RL+ AF
Sbjct: 102 NGEKGAEAHTVAEGDRIRFTKMLVAMREDENCNRIEMPPDLTNTERKFIHQLAIQLGLKSKSSGKGDARRIAITKVSERKKIAGQSLGDDDYLEAGDLALPSLNVGRKGAAALRRHILTHPPSAVEEAESRLTGSSITNVMLGIGGDAEEAEGDDEAGDGIVLGGGANVAEAGLLHALDELDLKGGDSRSKRKVAHTRTV-DITRRAQRHERAQKAKKSHRDYGRMLKQRKVLPAYSFASHICDAIGTHRVTVLSGDTGCGKSTQVPQFLLDDTRIGPTASIVITQPRRISAISVAERVASERCEDVGSTVGYNVRLEGATSADTQLLFVTPGVLLRRLQSSPDLNDFTIVIMDEVHERDKYTEFLMIALRDLMLRRDDLRLVLMSATIQTNELVTYWSGVGTEEWADIGGAVPPSLMPAEVSIPGRTFPVQEFFLEEVLSMTGFVDDDGLMFSPDMDRIETELMSLVTNQQPGILQQQKGGVSRGGNKRAGTQEGAVSVSQGDKSVLTCVMCGVSGFGLP-EELGEHVALCNG--------------GGNVTMLELEDK-------------------------------------VRG-------------IDLTFIVGHDYSGEAVAKEEPSEE---DAILPEYDSYDDEEEPGLRQGKWDGESPFGIADVVASNNLTTLTEEEMLNRYQSMHDDERVDDALLLETVKYIIQSSYGPEAILIFFPGWAEISEFTLLLESTEPFNDRTKCSILPLHSGIPSKEQRRVFVRPPEGVRKIILATNIAETSITIDDVAFVVDTGRAKEKSYDPHLKTSTLQPVWVSQASAKQRMGRAGRTKPGVCFHLFSRRRHSSFRPFLESELLRTPLEEMCLQCKKLDLAPGGPDDVDGIPAFLSKALTPPHPKSIANAIELLVELGAMDSETNDLTNLGQCLSALSLEPRVGKMVVWSHLLGCARAASSMGVAMSYKSPFVLPPSS-MRKAADNERIELSKHTESDQITILNILNIRDSFARKGRQNAFYGFCRDKFLGPTTIQMIADLRRNVSRELLSLSFPDPNNSGYHNRSGESDPAFLQAAIAAGLYPNVASRKRGESNFSTVTNRKAKVHISSVNSCKGQPLNNKCQVQEG-EIEFIIFGEMVRGVASFTMSQTTHLVSPLPLILLCGELRV------RPAHVEATSDRKKQSV-------------------LSVDDWILFICDEDTAAGLVVLRRRLNGAF 1246
BLAST of mRNA_C-linearis_contig11.1280.1 vs. uniprot
Match: A0A7S3Q8V1_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8V1_9STRA) HSP 1 Score: 652 bits (1681), Expect = 5.100e-205 Identity = 423/1068 (39.61%), Postives = 593/1068 (55.52%), Query Frame = 2
Query: 632 ELQRRASMYNAAQNKRKRAAGHQRMSSFRQGLPAWGYRDTIVDMVRDHQACLVSGETGCGKSTQVPQFLLDDPVIGPSCKIVCTQPRRISAIAVAERIAEERGESIGG---TVGYTIRLESSVSKDTQLVLMTPGILLKKLARDPMLKEYTHVLIDEVHERDRNSEFLLIVLRGLLTKRPD--LRLVLMSATLQQGKYSGYFGGCPITT-------IGARTFPVQAFFLEDVLVQTAYLKE------IGADAGGXXXXXXXLLG--------GTGLEGLEEA-----------------------VGEESFKCALCGKAGFSRSAEELGTHAAMCFGTAGLDPALEGFSDAGLELLMSEMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGESAVVSGSHGVGESGSADGEVDMSQFEAGSVGGDPEVREEEGEEEDDDGVFGTEEDEMSGIQ--------DALASQRWDGRGAFRAERAAAK---------TGRAEDLLTRYQFAFDDEAVDYELVECLLRYICRSAYEDGAVLVFLPGWDDITRLGEFLRQSPHFSDERKFQILPLHSGVPTVKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSSLRHDSLREHQESELLRTPLEEVVLQAKMLGLANGGPGDPDSAAGFLSQAIDAPPELSLRNAVQLLQSLGALD-DQEELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTAACAMTYKNPFMLPINAAQRKEAKSAKIALAQGSESDLIALLRALEGHADAKAKGGAGAAASLAHRGHLSAPTLGMIWEICGQVARELKGSGLPSAYDWGNPCNSNSR-DVSLLSSVLCAGLYPNVAMRRPGGTNFKTLGGHTARLHMSSINAARSQRLAQANSGRQTEFIAFGEMTRTATNFVMSNTSPV-SPLALLLLCGNLRAEELFFAQEEEDEELYDAQELSIRGAGGAAVGGRGGGPTELLLELDDWVQFRLPIEPGRHILVLRNRLHAAFAQHMQANGRPVTG 3628
++++R S++ Q + ++ M R LPA Y+ IVD + +++ ++SG+TGCGKSTQVPQF+LDD VIGP C IV TQPRRISAI++AER+A ER E+ G +GYT+R+E++ S TQ++ +TPG+LL+KL P L EYTHV+IDE+HERD+ +EFL+I LR ++T+ L LVLMSAT+Q + Y+ G + RTFPVQ+F+LEDVL T + + G+ +GG L G G +G V E S C +CGK GF + EELG+H +C G P + +++ E+ M ++ +++G + E D E D S+ G EV E+ ED+D V DE GI + + +WDG F + T E++L RYQ DDE +D EL+ +LRYI +S+Y DGAVL+FLPGW +I+ L L + F+D KF +LPLHSG+P+ +QR VF RP +G RKIVLSTNIAETS+TIDDVAFVIDSGRAKE +YDPHLK TL P W+S+ASA+QRRGRAGRTKAGVCFHLFS RH + RE ESELLRT LEE+ LQ K LGLA GGP D D FL+ A+ P S+ NA++LL ++GA+D D ELT+LG L+ +S++PRVGKMV+WSY+LGC+ A + A AM+YK PF++P ++ R++A A++ L+ G+ESD I +L+ LE +G ++ T+ MI ++ +AREL G P + + N N ++ L S + AG YPNVA+R PG NF T +++H+SS+NA + Q L++ + + EFIA+GEM + + M+ T+ + S +++LLLCG+ R + E ED E A +L +D W+ F+ + + +LRNRL A F H+ +N P TG
Sbjct: 398 DMKKRISLHKTLQTSKLTQPNYKSMKQARSKLPAHNYKSKIVDTIANNRVTILSGDTGCGKSTQVPQFILDDEVIGPGCNIVVTQPRRISAISIAERVAAERCENNGNGKSAIGYTVRMEANTSPSTQVLFLTPGVLLRKLQSSPSLSEYTHVIIDEIHERDKYTEFLMIALRQIMTRDTSSKLHLVLMSATIQTNELMKYWAGVGHVDMIPAEICVPGRTFPVQSFYLEDVLHITGVVSDENFAGGSGSGSGGMEDLEKDLAMLLESKRKIGNGSDGNXXXXXXXXXXXXXXXXXXXXXXELIMVSENSLVCVMCGKGGF-KCPEELGSHMGLCMG-----PVVGDNNNS--EMTMVDLENKVRHANVC----------------------------TIIAGVNDNNE----DDENDKSK----GKGNAEEVFEDY---EDEDIVIS---DEERGIDXXXXXXXINGMHHGKWDGESPFAVADVLSGGXXXXXSRGTLTEEEMLNRYQMIHDDEQIDSELILEVLRYIHKSSYGDGAVLIFLPGWQEISELSLLLDSTHPFNDRNKFSVLPLHSGIPSKEQRLVFQRPRQGVRKIVLSTNIAETSVTIDDVAFVIDSGRAKEKNYDPHLKTSTLQPMWISQASAKQRRGRAGRTKAGVCFHLFSRRRHTAFREFLESELLRTSLEEICLQCKRLGLAPGGPEDDDGIPAFLAAALSPPHIKSVANALELLINIGAMDGDTNELTNLGHCLSCLSVEPRVGKMVIWSYILGCSKDASSMAVAMSYKTPFIIPPSS-MRRDADYARVNLSDGTESDQITILKVLEVRDRFYKRGDKSRFYGYCRNNFINFATIQMISDLRRNIARELTSLGFPDPAAFNSWHNRNGTGSLATLQSTIVAGAYPNVAVREPGAINFSTSMNQKSKIHISSVNACKGQPLSRKS--QMLEFIAYGEMVKGVAMYTMNMTTHLASVVSILLLCGDFRVRPAVWVVEGEDTETNKA-----------------------VLSVDQWILFKCDKDIASSLAILRNRLDAIF-HHIVSN--PKTG 1386
BLAST of mRNA_C-linearis_contig11.1280.1 vs. uniprot
Match: A0A7S4QY79_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QY79_9STRA) HSP 1 Score: 616 bits (1588), Expect = 2.110e-195 Identity = 425/1089 (39.03%), Postives = 579/1089 (53.17%), Query Frame = 2
Query: 641 RRASMYNAAQNKRKRAAGHQRMSSFRQGLPAWGYRDTIVDMVRDHQACLVSGETGCGKSTQVPQFLLDDPVIGPSCKIVCTQPRRISAIAVAERIAEERGESIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKL-----ARDPMLKEYTHVLIDEVHERDRNSEFLLIVLRGLLTK--RPDLRLVLMSATLQQGKYSGYFGGCPITTIGA---------------------------------------------RTFPVQAFFLEDVLVQTAYLKEIGADAGGXXXXXXXLLGGTGLEGLEEAV----------------------------GEESFKCALCGKAGFSRSAEELGTHAAMCFGTAG-------------LDP-ALEGFSDAGLELLMSEMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGESAVVSGSHGVGESGSADGEVDMSQFEAGSVGGDPEVREEEGEEEDDDGVFGTEEDEMSGIQDALASQRWDGRGAFRAE-------RAAAKTGRAEDLLTRYQFAFDDEAVDYELVECLLRYICRSAYEDGAVLVFLPGWDDITRLGEFLRQSPHFSDERKFQILPLHSGVPTVKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSSLRHDSLREHQESELLRTPLEEVVLQAKMLGLANGGPGDPDSAAGFLSQAIDAPPELSLRNAVQLLQSLGALDDQ-EELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTAACAMTYKNPFMLPINAAQRKEAKSAKIALAQGSESDLIALLRALEGHADAKAKGGAGAAASLAHRGHLSAPTLGMIWEICGQVARELKGSGLPSAYDWGNPCNSNSRDVSLLSSVLCAGLYPNVAMRRPGGTNFKTLGGHTARLHMSSINAARSQRLA---QANSGRQTEFIAFGEMTRTATNFVMSNTSP-VSPLALLLLCGNLRAEELFFAQEEEDEELYDAQELSIRGAGGAAVGGRGGGPTELLLELDDWVQFRLPIEPGRHILVLRNRLHAAF 3589
+R ++ QN +++ + + S R+ LPA+ Y I + + ++SG+TGCGKSTQVPQFLLDDP IGP+ I+ TQPRR SAI++AER+A ER E++GGT+GY +RL+++ SKDTQ + +TPG+LL+K + +LK+ TH+++DE+HERDR ++FL+I LR L++ + DL+++LMSAT+Q + Y+ G I I + RT+PVQ FFLED+L T Y+ L E+A+ S C +CGK+ F +S EELGTH A+C G G +DP A+ GF DA XXXXXXXXXXXXXXXXXX + G LA +WDG F ++ T E++L +YQ DDE +D L+ LL+YI +S+Y DGAVL+F PGW +IT L +P F + ++ + LHSGVP+ QR+VF R G RKIVL+TNIAETS+TIDDVAFV+D+GRAKE +YDPHLK TL P WVS+ASA+QR+GRAGRTKAGVCFHLFS RH SLR ESELLRTPLEE+ LQ K L LA+GGP D D FL++A+ P ++ NA++LL LGA+D + ELTDLG L+ +S++PRVGKMV+WS+LLGCA A + A AM+YK+PF+LP A+ R+ A SAK+ L+ SESD I +L L+ G + + LS PT+ MI ++ V+REL G PS D G + + + L +V+ AGLYPNVA R G NF T+ A++H+SS+N+ + Q L+ Q G + EFI FGEM R +F M+ T+ VS L LLLLCG LR + + +++ DA + I P + +L +DDW+ F E ++VLR RL +AF
Sbjct: 38 KRVQRHSTLQNLKRQNPHYTSILSSRKQLPAYSYAPQICHTISTNTITILSGDTGCGKSTQVPQFLLDDPNIGPTANIIVTQPRRFSAISLAERVAYERCENVGGTIGYNVRLDNNFSKDTQCLFVTPGVLLRKFRSSGEGENEVLKDVTHIILDEIHERDRYTDFLMIALRDLISSGAKVDLKVILMSATIQTHELMKYWSGVGIQNIPSSMPDQEDLLLLEEETPTIALPKKNVDDLEEEEKIFLPPAEISIPGRTYPVQEFFLEDILSMTQYISHHTTTQQTDMQRMEDELSSLIQTKQEQALIQSWSHKPSSSNRRSKKKQSATPIISIGNSHSLTCIMCGKSNF-KSPEELGTHVALCDGGGGGISMEELEEKVRNVDPNAIMGFDDA-------------------RGNEEEXXXXXXXXXXXXXXXXXXXXXXXXIPG---------------------------------------------------------LAMGKWDGESPFGVADNIPQLISSSKTTLTEEEMLLQYQTMHDDEQIDNTLLLELLKYIVQSSYGDGAVLIFFPGWQEITEFQMMLESTPPFHNVAEYNLFVLHSGVPSKDQRKVFQRCKGGARKIVLATNIAETSVTIDDVAFVVDTGRAKEKNYDPHLKTSTLQPVWVSQASAKQRKGRAGRTKAGVCFHLFSRRRHSSLRLFTESELLRTPLEELCLQCKKLDLASGGPEDADGIPAFLAKALTPPHPKAVSNALELLVELGAMDSETNELTDLGQCLSILSLEPRVGKMVIWSHLLGCAKAASSMAVAMSYKSPFVLP-PASMRRAADSAKVELSDRSESDQITILNVLKFRDKVHKSGRQNSFFNFCRSNFLSPPTMQMISDLRKNVSRELLSLGFPSPTDSGYHNRNGDSNPAFLQAVIAAGLYPNVASRMQGEANFSTMTNRKAKVHISSLNSCKGQPLSSKCQVPKG-EIEFIIFGEMVRGVASFTMNQTTHLVSALPLLLLCGELRVRPARMSINKNNDDGGDAGDEVI--------------PDKAVLSVDDWIVFLCDREIAAALVVLRKRLDSAF 1033
BLAST of mRNA_C-linearis_contig11.1280.1 vs. uniprot
Match: A0A7S2UJW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJW6_9STRA) HSP 1 Score: 590 bits (1521), Expect = 1.510e-188 Identity = 409/907 (45.09%), Postives = 519/907 (57.22%), Query Frame = 2
Query: 662 AAQNKRKRAAGHQRMSSFRQGLPAWGYRDTIVDMVRDHQACLVSGETGCGKSTQVPQFLLDDPVIGPSCKIVCTQPRRISAIAVAERIAEERGESIGGTVGYTIRLESSVSKD-TQLVLMTPGILLKKLARDPMLKEYTHVLIDEVHERDRNSEFLLIVLRGLLT--KRPDLRLVLMSATLQQGKYSGYFGGCPIT----------TIGARTFPVQAFFLEDVLVQTAYLKEIGADAGGXXXXXXXLLGGTGLEGLEEAV----------------------------------GEESFKCALCGKAGFSRSAEELGTHAAMCFGTAGL--DPALEGFSDAGLELLMSEMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGESAVVSGSHGVGESGSADGEVDMSQFEAGSVGGDPEVREEEGEEEDDDGVFGTEEDEMSGIQDALASQRWDGRGAFR-AERAAAK----TGRAEDLLTRYQFAFDDEAVDYELVECLLRYICRSAYEDGAVLVFLPGWDDITRLGEFLRQSPHFSDERKFQILPLHSGVPTVKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSSLRHDSLREHQESELLRTPLEEVVLQAKMLGLANGGPGDPDSAAGFLSQAIDAPPELSLRNAVQLLQSLGALDDQEE-LTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTAACAMTYKNPFMLPINAAQRKEAKSAKIALAQGSESDLIALLRALEGHADAKAKGGAGAAASLAHRGHLSAPTLGMIWEICGQVARELKGSGLPSAYDWGNPCNSNS--RDVSL---LSSVLCAGLYPNVAMRRPGGTNFKTLGGHTARLH 3202
A+Q ++ ++M RQ LPA+ Y ++I V+ H +++G+TGCGKSTQVPQFLLDDP IGP+C IV TQPRRISAI+VAER+A E+ S TVGY +RLESS S D TQLV +TPGILL+KL P L EYTH+++DEVHERDR +EFL+I L+ LL +RPDL ++LMSATLQ Y+ G T +I RTFPVQ FFLED L T ++ + ++ L + LE + G + C +C +GF +S EELGTH A+C G G+ D E + + L S ++G XXXXXXXXXXXXXXXXXXXXXXXXX G+V G +WDG F A+ ++K T E+ L RYQ DDE VDYEL+ +++YI S+Y DGA+L+F PGW++I+ L + FSD KF ILPLHSG+P+ Q++VF RPPK RKI+LSTNIAETSITIDDVAFV+D+GRAKE SYDPHLK TL P WVS+ASA+QR+GRAGR KAGVCFHLFS R++S R +SELLRTPLEE+ LQ K L LA GGP D D FLS+A+ AP S+ NA++LL LGA+ + + LT LG LA +S++PRVGKMV+WSYLLGCA A + AM+YK+PF+LP QR+ A AKIAL+ SESD I +L AL + G + L TL MI E+ V+REL G P + N N +D SL L + + AGLYPNVA+R G NF T+ A++H
Sbjct: 6 ASQKAKRHDPSFKQMLKHRQQLPAFSYAESICKSVQSHAVTILTGDTGCGKSTQVPQFLLDDPTIGPTCNIVITQPRRISAISVAERVASEQCSSSSKTVGYQVRLESSFSPDETQLVFVTPGILLRKLQSSPSLSEYTHIILDEVHERDRYTEFLMICLKNLLASGQRPDLHVILMSATLQTNALMEYWSGLNDTIEGFSLPAQVSIPGRTFPVQEFFLEDALAMTGFVNDDRFES-------DMTLVESELEKVXXXXXXXXXXXXXXXXXXXXXXXXXXKKSKDPHTLAMGGGNTLTCIMCNHSGF-KSPEELGTHVALCDGGGGIGMDQLEEKVRE--IPLHSSLLSGYDDGAAVXXXXXXXXXXXXXXXXXXXXXXXXX------------------------XXXXXPGTVMG-----------------------------------KWDGESPFMVADMMSSKNTGPTLTEEEHLNRYQSMHDDEQVDYELLLAVIQYIHGSSYGDGAILIFFPGWNEISEFTMLLEGTMPFSDTSKFWILPLHSGIPSKDQKKVFQRPPKNMRKIILSTNIAETSITIDDVAFVVDTGRAKEKSYDPHLKTSTLQPVWVSQASAKQRKGRAGRVKAGVCFHLFSRRRYESFRPFLDSELLRTPLEEMCLQCKKLNLAPGGPEDEDGIPVFLSKALSAPHPKSVANALELLVELGAMQEGDNSLTHLGQCLAVLSLEPRVGKMVIWSYLLGCARSASSMGVAMSYKSPFVLPPTH-QRRAADKAKIALSDRSESDQITVLHALHERDQIHRQRGQRGVQDFCRQNFLGVSTLQMIAELRQNVSRELVSLGFPPTSEASGYHNRNDTKKDRSLGYFLQAAIVAGLYPNVALRTRGDVNFSTMTNRKAKVH 842
BLAST of mRNA_C-linearis_contig11.1280.1 vs. uniprot
Match: A0A8J9RMQ1_9CHLO (3'-5' RNA helicase YTHDC2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RMQ1_9CHLO) HSP 1 Score: 570 bits (1469), Expect = 5.030e-176 Identity = 434/1170 (37.09%), Postives = 608/1170 (51.97%), Query Frame = 2
Query: 182 VAESTRITLDKQLRVFRDDEDATSLAFPPDLDNTSRKFIHEAVKRLGLDSKSRGKGESRYITVSKKKGSGDGGEGAELPPILQLGHARDSALETYFSRRPPAAREVETVMSSAVGGGMHAAAELVTQKRHKATLLDKQAKAMASPGASAQELQRRASMYNAAQNKRKRAAGHQRMSSFRQGLPAWGYRDTIVDMVRDHQACLVSGETGCGKSTQVPQFLLDDP-VIGPSCKIVCTQPRRISAIAVAERIAEERGESIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLARDPMLKEYTHVLIDEVHERDRNSEFLLIVLRGLLTKRPDLRLVLMSATLQQGKYSGYFGGCPITTIGARTFPVQAFFLEDVLVQTAYLKEI-GADAGGXXXXXXXLLGGTGLEGLEEAVGEESFKCALCGKAGFSRSAEELGTHAAMCFGTAGLDPALEGFSDAGLELLMSEMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGESAVVSGSHGVGESGSADGEVDMSQFEAG-SVGGDPEVREEEGEEEDDDGV-FGTEEDEMSGIQDALASQRWDGRGAFRAERAAAKTGRAEDLLTRYQFAFDDEAVDYELVECLLRYIC------RSAYED---GAVLVFLPGWDDITRLGEFLRQSPHFSDERKFQILPLHSGVPTVKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSSLRHDSLREHQESELLRTPLEEVVLQAKML---GLANGGPGDPDSAAGFLSQAIDAPPELSLRNAVQLLQSLGALDDQ-EELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTAACAMTYKNPFMLPINAAQRKEAKSAKIALAQGSE--SDLIALLRALEGHADAKAKGG--AGAAASLAHRGHLSAPTLGMIWEICGQVARELKGSGLPSAYDWGNPCNSNSRDVSLLSSVLCAGLYPNVAM---RRPG-------GTNFKTLGGHTARLHMSSINAARSQRLAQANSGRQTEFIAFGEMTRTATNFVMSNTSPVSPLALLLLCGNLRAEELFFAQEEEDEELYDAQELSIRGAGGA--AVGGRGGGPTELLLELDDWVQFRLPIEPGRHILVLRNRLHAAFA 3592
V+E +R+++ +QL F+ D TS FPP L+N R +H ++ G SKS+GKG+SR +TVSK SG + A+ L + A L+ Y+ R P E+ + GGG+ + Q H+ K+ + S QE++R+ +AA K ++A ++S R LP YR I+ + HQ LV+GETGCGK+TQVPQFLL+D G C+I+CTQPRRISAI++AER+A ERGE G TVGYTIRLES + L+ T G+LL+ L + L + THV++DE+HERDR ++FLLI+LR LL P+LR+VLMSATL +S YFGGCP+ + T PV +LEDVL Y + G GG G G G+++ ++A ++ +A + L G SD + L+ EM G G VV S G +A G+ ++ A + G DP +R +G D FG + I + L S A +A+ + +++YQ + D + VD L+E LL YIC R+ +D GAVL+FLPGWD+I RL E L K+ ILPLHS VP +QR+VF RPP G RKIVL+TNIAET++TIDD+ VI+SGR KE SYDP+ + TL W+SKAS RQRRGRAGR + GVCFHL+S +R + L + Q EL R+PL+E+ LQ K+L G N S A FL +A++ PP +S+ NAV+LLQ +GAL+ E LT LG LA + + PR+GKM+L+ L GC P LT +C M Y++P++LPI A R+ A +AK AL+ G+ SD +AL+RA +A+G A AAA+ G T+ MI + Q+ EL G S+ + + N+RDV L+ SV+ AG YP V ++ G + T ++H SS+N R + F E+TRT + + + V+P L L+ LR AQ+ + + D + AG A G G T + E+D W+ R+P +L LR RL A FA
Sbjct: 24 VSEQSRLSIAEQLEEFQR-SDETSYRFPPGLNNHDRAVVHAECRKYGFTSKSQGKGDSRQVTVSKPAASG---QLAKDTFDLPVSPASLEVLQAYYERHLPKEEELTAIQQ---GGGVTSLGAADHQV-HQQLGGRKRGTTTGAAHFSEQEVRRQ----HAAWQKAQQAPAVTAITSTRNSLPIAPYRSDILQAIASHQVVLVAGETGCGKTTQVPQFLLEDAWAAGRGCRIMCTQPRRISAISIAERVAAERGERCGTTVGYTIRLESKGGPASSLMFCTNGVLLRMLTQGEGLNDITHVIVDEIHERDRFADFLLILLRDLLPAHPNLRVVLMSATLHIELFSNYFGGCPVIEVPGFTHPVTDMYLEDVLRLIGYQDALLGQHNGGP--------GRRGPPGIQQPAP--------------GKAAADIPKEQREAIESAIMQAFLHG-SDEHFDFLL-EMTGANSMDEADAS-----------------------GCVNVVHSSTGATALMAAAGKGRLADVAALLTAGADPLLRSRDGSSAQDWATKFG-----HADIAEFLGSH-------MEAAQASGHVEVSALAVSQYQASTDADEVDLALIEALLMYICGEGPYRRAEEQDAALGAVLIFLPGWDEIIRLKEQLENKQSALSGSKYSILPLHSMVPAAEQRKVFKRPPVGVRKIVLATNIAETAVTIDDIVCVINSGRHKEKSYDPYTNVSTLQATWISKASERQRRGRAGRCQQGVCFHLYSRVRSEGLADFQLPELQRSPLDELSLQVKLLESSGFNN------TSIAEFLDKAVEPPPAVSVANAVRLLQDIGALEAPGERLTVLGRHLAALPLPPRIGKMLLYGVLFGCLDPILTISCCMAYRDPWVLPIEANARRAATAAKQALSDGAGGCSDHLALVRAYNAWTAERARGREYAYAAATFVSNG-----TMSMIDGMRMQLLGELTARGFVSSLE---AASQNARDVGLVRSVMAAGFYPLVGRLLSKKLGKGQPPRKSAHILTAKEDKVKIHQSSVNCQLDAPQVPKGDPRPCPIMIFEEVTRTESVLAVRQCTAVNPHVLPLVAAELR-----LAQQLDSDSDSDDDRANGLPAGPAWDEEDEEGTGETTQV-EVDGWLSLRVPTAALAPMLCLRQRLGACFA 1102
BLAST of mRNA_C-linearis_contig11.1280.1 vs. uniprot
Match: A0A1Y1HXI7_KLENI (RNA helicase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXI7_KLENI) HSP 1 Score: 565 bits (1457), Expect = 3.350e-174 Identity = 414/1184 (34.97%), Postives = 594/1184 (50.17%), Query Frame = 2
Query: 182 VAESTRITLDKQLRVFRDDEDATSLAFPPDLDNTSRKFIHEAVKRLGLDSKSRGKGESRYITVSKKKGSGDGGEGAELPPILQLGHARDSALETYFSRRPPAAREVETVMSSA----VGGGMHAAAELVTQKRHKATLLDKQAKAMASPGASAQELQRRASMYNAAQNKRKRAAGHQRMSSFRQGLPAWGYRDTIVDMVRDHQACLVSGETGCGKSTQVPQFLLDDP-VIGPSCKIVCTQPRRISAIAVAERIAEERGESIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKL---ARDPMLKEY----------THVLIDEVHERDRNSEFLLIVLRGLLTKRPDLRLVLMSATLQQGKYSGYFGGCPITTIGARTFPVQAFFLEDVLVQTAYLKEIGADAGGXXXXXXXLLGGTGLEGLEEAVGEESFKCALCGKAGFSRSAEELGTHAAMCFGTAGLDPALEGF--SDAGLELLMSEMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGESAVVSGSHGVGESGSADGEVDMSQFEAGSVGGDPEVREEEGEEEDDDGVFGTEEDEMSGIQDALASQRWDGRGAFRAERAAAKTGRAEDLLTRYQFAFDDEAVDYELVECLLRYICRS-----AY---------EDGAVLVFLPGWDDITRLGEFLRQSPHFSDERKFQILPLHSGVPTVKQRQVFVRPPKGCRKIVLSTNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKASARQRRGRAGRTKAGVCFHLFSSLRHDSLREHQESELLRTPLEEVVLQAKMLGLANGGPGDPD-SAAGFLSQAIDAPPELSLRNAVQLLQSLGALDDQEELTDLGARLAGISIDPRVGKMVLWSYLLGCAGPALTAACAMTYKNPFMLPINAAQRKEAKSAKIALAQ--GSESDLIALLRALEGHADAKAKGGAGAAASLAHRGHLSAPTLGMIWEICGQVARELKGSGLPSAYDWGN--PCNSNSRDVSLLSSVLCAGLYPNVAMRRP------GGTNFKTLGGHTARLHMSSINAARSQRLAQANSGRQTEFIAFGEMTRTATNFVMSNTSPVSPLALLLLCGNLRAEELFFAQEEEDEELYDAQEL--SIRGAGGAAVGGRGGGPTELLLELDDWVQFRLPIEPGRHILVLRNRLHAAFA 3592
V+E +RI++ Q+ FR+ D T F L N R +H ++ GL SKS G G R +TV K K +LP +Q +A+ F PP E++ M G + A ++R + + M S ++Q ++A Q + K A +++ + R+ LP G++D I + V ++Q L++GETGCGK+TQVPQFLLD G CKI+CTQPRRISA+ VAER+A ERGE++GGTVGY IRL++ ++ L+ T GILL+KL AR ++E TH+++DE+HERD+ ++F+LI+LR +L KRPDLRLVLMSATL ++GYFGGCP+ T+ T PV+++FLEDVL T + ++ L +++A+ +A E L + +G G + L F S+ G LM V +G G VD +G D + DG E E G + + + + + + E + K A +L +YQ D E VD L++ +L YICR +Y +DGAVLVFLPGW++IT L + L SP F D+ +F++LPLHS VP Q++VF RPP G RKIVL+TNIAET+ITIDDV +VIDSG+ KE SYDP + TL W+SKASARQR GRAGR +AGVC+HLFS RH ++ E Q EL RTPL+E+ LQ K+L DP+ + FL +A++ P E S+ NAV LL +GAL E LT LG LA + + P KM+L + L C PALT AC +Y++PF+LP+ QR++A K L + G SD +AL+ A EG AK +G R ++ T+ M+ + Q+ EL G G PC++N+RD L+ +VL AG+YP V P G + T G RLH +S+N + + + + F E+ R + ++ V P AL+L + L +E E D +E + + G+A+ + P ++L D W++F+ + LR RL A FA
Sbjct: 8 VSEESRISIADQVEKFRESTD-TEYTFEAGLSNHDRAIVHNLSQKYGLKSKSYGTGADRRVTVFKPKAVAVSRSATQLPFSIQS----QAAMLELFMNFPPTQEELDAAMGEGPPGVASGRVEAEGPYAPERR-----VQSRPPPMTSADVTSQ--------FSALQRRLKGDASLRQIMALREKLPIAGFKDVITEAVNNNQVVLIAGETGCGKTTQVPQFLLDSCWEKGRPCKILCTQPRRISAMTVAERVANERGEALGGTVGYQIRLDTVGGPNSSLMFCTNGILLRKLTGAARKKAVEELEAENEVDIDATHIVVDEIHERDKFADFVLIILRDILPKRPDLRLVLMSATLNADLFAGYFGGCPVITVPGFTHPVKSYFLEDVLTMTGFAEQHAQTLQTDPALDINRLSDEDRYAMDDALA----------RAWMDADFEPL--MELVAYGDRGANKLLVNFQHSETGASPLM------------------------------------------VAAGK----------GRVDDVAMLL-ELGADANLASW-------DGATAAEWAENFGFPEIVETVQ---KHEEKLEASKEKDVEAA-VLRKYQAGVDVEEVDLNLIQQVLAYICRPNGQERSYADAGDGRNSDDGAVLVFLPGWEEITNLRDKLAASPIFKDDSRFRVLPLHSMVPVADQKKVFTRPPAGTRKIVLATNIAETAITIDDVVYVIDSGKVKEKSYDPFTNVSTLQCGWISKASARQREGRAGRVRAGVCYHLFSKARHAAMLEFQVPELKRTPLDELGLQVKLL--------DPNVTIQEFLKKAVEPPNEQSVANAVALLHDIGALGADESLTRLGLHLASLPLSPTTAKMLLHAILFDCLDPALTVACGASYRDPFVLPVTLEQRRKAAGGKFILTESYGGGSDHLALIAAFEGWRAAK---DSGCEKEFCDRFFINGGTMNMLQGMRQQLQSELAQRGFIPKSRQGEAVPCSANARDPGLVRAVLAAGMYPLVGSLLPSREGATGKASIVTAGNDKVRLHPNSVNHRLTSNARLGDERSASTLLVFDEIMRGEAFMYIRASTVVQPHALVLFAAEMAVAPLEPVPQEYVEVDLDDEEAGPTPKPEPGSALFSQPEKPVAVVL--DRWLRFQTTAVEAAQLYCLRERLAATFA 1084 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1280.1 >prot_C-linearis_contig11.1280.1 ID=prot_C-linearis_contig11.1280.1|Name=mRNA_C-linearis_contig11.1280.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1315bp MGRGRGRGDQNRVKGGRGGYSGAAKSNGGIFGGGVADGKPLTSGQVGLDTback to top mRNA from alignment at C-linearis_contig11:2191777..2207386+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1280.1 ID=mRNA_C-linearis_contig11.1280.1|Name=mRNA_C-linearis_contig11.1280.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15610bp|location=Sequence derived from alignment at C-linearis_contig11:2191777..2207386+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:2191777..2207386+ >mRNA_C-linearis_contig11.1280.1 ID=mRNA_C-linearis_contig11.1280.1|Name=mRNA_C-linearis_contig11.1280.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7890bp|location=Sequence derived from alignment at C-linearis_contig11:2191777..2207386+ (Chordaria linearis ClinC8C monoicous)back to top |