mRNA_C-linearis_contig11.1265.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1265.1
Unique NamemRNA_C-linearis_contig11.1265.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 800 bits (2065), Expect = 3.270e-283
Identity = 423/492 (85.98%), Postives = 433/492 (88.01%), Query Frame = 2
Query:   11 WCVCHMINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGGERPATSTPREHSLLTGVAKGTRQHMCESVDWRWFDKRYKSAESQHTDYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPGGDGQDEEPPSLEQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 1486
            WCVCHMINCALVEAFGTHVDPAKS NPGARKVITTVKKVVEHIR+SPRAKAIFEEEQV+QYAQCYHRKLVNAAPQRWSGV NVLEAVIVNRAAIDGVYTAEGKDSPLTSLT+EIDELYSIIKPAAQVIVKCQQTSVPTGQVAVL+LAALKL TLNVDSPLEILTPARKLAQA TSGIGGGERPATSTPREHSL TGVAKGTRQH+CESVDW WFDKRYKSAESQ TDYV   +                          +  +T             AAL TGDVSTTPAGSAAADEPAAKRARQAAAPGSVHP+FKAPVNKREEATTNMYASLGLFGPGGD Q+EEPPS EQTARAELT LRAVQGGSLA GLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEA ARTKIPGRLANPVE LEQLDG FAPVDLTDEEASD
Sbjct:  263 WCVCHMINCALVEAFGTHVDPAKSGNPGARKVITTVKKVVEHIRKSPRAKAIFEEEQVQQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAIDGVYTAEGKDSPLTSLTEEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQAETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRYKSAESQDTDYVSTCRWPC----------------------TRPRLT------------CAALHTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPLFKAPVNKREEATTNMYASLGLFGPGGDEQNEEPPSFEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAARTKIPGRLANPVERLEQLDGVFAPVDLTDEEASD 720          
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 697 bits (1798), Expect = 3.140e-246
Identity = 381/492 (77.44%), Postives = 391/492 (79.47%), Query Frame = 2
Query:   11 WCVCHMINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGGERPATSTPREHSLLTGVAKGTRQHMCESVDWRWFDKRYKSAESQHTDYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPGGDGQDEEPPSLEQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 1486
            WCVCHM+NCA+V+AFG HVDPAKSRNPGARKVITTVK +VEHIR+SPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGV NVLEAVIVNR AIDGVY AEGK SPLTSLTDEIDEL+ IIKPAAQVIV                                                  GERPATSTPREHSLLTGVA+GTRQHMCESVDWRWFDKRYKSA+SQ TDYVFDMQMALH TTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAAL TGD STTPA SAAAD+PAAKRARQAAAPGS                                  EEPPS EQTARAELTKLRAVQGGSLAAGL CEDVLKWWKMWAHAYPLLARVARVV GA ASAAVLE DFSNAGRMMTSSRSTMDSKYVEMI+FLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD
Sbjct:   84 WCVCHMMNCAVVKAFGMHVDPAKSRNPGARKVITTVKTIVEHIRKSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRPAIDGVYAAEGKHSPLTSLTDEIDELHYIIKPAAQVIVS-------------------------------------------------GERPATSTPREHSLLTGVARGTRQHMCESVDWRWFDKRYKSAKSQDTDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALHTGDGSTTPAWSAAADKPAAKRARQAAAPGS---------------------------------KEEPPSFEQTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 493          
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 535 bits (1378), Expect = 5.360e-180
Identity = 296/492 (60.16%), Postives = 353/492 (71.75%), Query Frame = 2
Query:   14 CVCHMINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQS--PRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGGERPATSTPREHSLLTGVAKGTRQHMCESVDWRWFDKRYKSAESQHT-DYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPG-GDGQDEEPPSLEQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEE 1477
            CVCHM+NC+LVEA GT VD  K  NP ARKV+  VKKVVEHIR+S  P AKAIF+EEQVR Y+QC HRKLVN APQRWSGV+ VLEA IVNR  IDGVY  EG  +PL    +EIDELYS+IKP A++IV CQQT VPTGQ AVL LA LKL+T NVD+ L++LTP R  AQ    G GGGER ATS PR H+ LT V +  R+H+  ++D R+FD+ YKSA+S+ T D+VFDMQM LH TTADL+YVDKL ST   A  VK +ITDK+I+LAV+LAE       ++    AG    DE  AKRAR AAAPGS+        NK+++A T  +ASLGLF    G G+  + P+ E  ARAEL  LR V+ G+L   LSCE VL+WWK W   YPLLAR ARVVFGAPASAAVLERDF++A  MM SSRS  D+KYVEM++FLHGNLDLIPE I +L +   + KIPGRL+NP+  L  LDG    VDLT++E
Sbjct:  175 CVCHMLNCSLVEAIGTRVDSRKPGNPAARKVVLAVKKVVEHIRRSKSPGAKAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVGIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVR--AQGWPEGTGGGERKATSVPRLHNHLTQVGRDAREHLASALDRRYFDRCYKSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEK------EMERKQAGPEQ-DESVAKRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQAKIPGRLSNPIPELHGLDGTLGLVDLTNDE 657          
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 485 bits (1248), Expect = 3.570e-159
Identity = 273/495 (55.15%), Postives = 336/495 (67.88%), Query Frame = 2
Query:   11 WCVCHMINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGGERPATSTPREHSLLTGVAKGTRQHMCESVDWRWFDKRYKSAESQHTDYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPGGDGQDEEPPSLEQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKL-TEAV--ARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 1486
            WCVCHM++ +L EA GT V P +     AR V+  VKK VE +R+SP +K IF EEQV Q++QC +RK+VNAAPQRWSGV   LEA + NRAAI+GVY  EG+DSPL+    EIDELYS+I+P A+VI  CQQT  PTGQ AVL LAALKL+TLN D+PL+ILTPA K  Q  T G GG +R   +T R H  LT V +  R+H+  ++ WR FDKRYKS  ++ T  VFDMQM LH  TADL+YV +LA T   A  VK  ITDK+I+LA KLA+  A   G         A   EPAAKRA QA+APG+ +PMF +    +E  TT + A LGL     +G    P  +E+ ARAEL  LR+    +L    SCE VL WWK   H+YPLLARVARVVF APAS  V ERD  +AGRMMTSSRST D+KYVEM++FLHGN+DL+PE I +L  + V   +TKIPGRL+NP+  L  LDG F PVDLT+++ S+
Sbjct:  284 WCVCHMLSDSLAEAVGTCVGPQQPGGRAARNVVMAVKKAVERVRKSPASKDIFTEEQVIQFSQCSNRKVVNAAPQRWSGVTGALEATVTNRAAINGVYAEEGEDSPLSPHVHEIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGGEQR---TTARAHKDLTRVGREAREHLASALHWRDFDKRYKSTVAKSTGLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADKKAERKGI-------EAEQGEPAAKRAPQASAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASP--IER-ARAELETLRSASDDALFGDTSCEGVLNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSNPMLELHALDGEFGPVDLTNDDESE 765          
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE)

HSP 1 Score: 421 bits (1083), Expect = 1.210e-141
Identity = 228/288 (79.17%), Postives = 235/288 (81.60%), Query Frame = 2
Query:  623 MCESVDWRWFDKRYKSAESQHTDYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPGGDGQDEEPPSLEQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 1486
            MCESVDWR FDKRYKSAESQ TDYVFDMQMALH TTA LRYV+KLASTSAFAGAVKSTITDKVI L V+LAEAAAL TGD STTPAG                                EEATTNM+ASLGLFGPG DGQ+EEP S +QTARAELTKLRAVQGG LAA L CEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLE  FSNAGRM TSSRSTMDS YVEMIMFLHGNL+LIPEDITKLTE VARTK PGRLANPV+GLE LDGAFAPVDLTDEEASD
Sbjct:    1 MCESVDWRRFDKRYKSAESQDTDYVFDMQMALHPTTAGLRYVEKLASTSAFAGAVKSTITDKVIFLTVRLAEAAALHTGDGSTTPAG--------------------------------EEATTNMHASLGLFGPGVDGQNEEPQSFKQTARAELTKLRAVQGGRLAARLRCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKLTEVVARTKFPGRLANPVDGLEPLDGAFAPVDLTDEEASD 256          
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE)

HSP 1 Score: 392 bits (1006), Expect = 3.540e-127
Identity = 247/480 (51.46%), Postives = 289/480 (60.21%), Query Frame = 2
Query:   50 AFGTHVDPAKSRNPGARKVITTVKKVVEHIRQS--PRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGGERPATSTPREHSLLTGVAKGTRQHMCESVDWRWFDKRYKSAES-QHTDYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPGGDGQD-EEPPSLEQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEE 1477
            A GT VD  K  N  ARK++  VKKVVEHIR+S  P A+AIF+EEQVR Y+QC HRKLVN APQRWSGV  VLEA IVNR  IDGVY  EG  +PL     +IDELYS+IKP A++IV  QQT VPTGQ A L LAALKL+T NVD+ L++LTPAR  AQ    G GG E  ATS PR                C           YK A+S + TD+VFDMQM LH TTADL+YVDKLAS+   A  V   ITDK+I+LAV+LA      T ++    AG     E  AK+AR AAAP S HP      NK E+A T  + SL LF     G +  + P+ E  A AE   LR V+ GSL   L CE VLKWW+ W  +YPLLAR ARV FGAPA+                      D+KYVEM++FLHG LDL PE I +L +     KIPGRL+NPV  L  LDG   PVDLT +E
Sbjct:   13 AIGTRVDSRKPGNRAARKMVLAVKKVVEHIRKSKSPGAQAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVGGVLEATIVNRVDIDGVYAREGSVNPLAPHEHDIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPAR--AQGRPEGAGGVEPKATSVPR----------------C-----------YKPADSAKTTDFVFDMQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELA------TKEMERKQAGPEQ-HESVAKQARPAAAPKSSHPAVARARNKNEDAATAKFTSLRLFKKRRVGANASQQPTFEPMACAEFETLRGVEAGSLTDDLGCEGVLKWWEKWEGSYPLLARAARVDFGAPAAG---------------------DAKYVEMVLFLHGKLDLFPEQIPELRDEDIHAKIPGRLSNPVPELHGLDGTLGPVDLTHDE 435          
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 1.830e-68
Identity = 181/506 (35.77%), Postives = 265/506 (52.37%), Query Frame = 2
Query:   11 WCVCHMINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVY--TAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQ---AGTSGIGGGERPATSTPREHSLLTGVAKGTRQHMCESVDWRWFDKRYKS--AESQHTDYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVST-TPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFG--PGGDGQDEEPPSL--EQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHA-YPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLD-GAFAPVDLTDEEASD 1486
            WC  HM+NC LVEAFGT+   A  +N GAR+VI TVKKVVEH+ +S   KA +++ QV  Y +    KLVNA P RW    NVLE ++ +  A++  Y    +G   PL      I+ELYS++KP + ++ + Q+  +PTG     +L  L+  TL+V  PLE+  P RK+     A T      ERPA S       L  V   TR  +  ++D R+F KRY +       +DYVF+M   +      L ++  + S+   AG V   I  KV+ L VKLAE A    G  +    +G++A+  P  KR+R              P+       T      G+FG       +D+ P  L  ++  + E  +  A    +  +    E +L++W     A YP +AR ARV+   PAS+AVLERDFS AGR++T +RS + + YVEM++FL+GN + IP ++ KL+++  +  +P RL+NP E  E+L  G   P   TDE A +
Sbjct:  345 WCFPHMLNCVLVEAFGTNASRAACKNLGARQVIDTVKKVVEHLNKSTLMKARYDDIQVLLYGKSM--KLVNAVPHRWISTCNVLEEILRSWQALEEHYQKNEQGGSFPLAQHKTVIEELYSLMKPISVIMKESQEKGLPTGLSTFAALVMLRADTLDVTKPLEVTVP-RKVTTTDWARTLATTTIERPADS-------LQDVTTTTRTMLAAALDKRFFSKRYDANVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKLAEGAGAYPGKATEGDTSGASASAPPPFKRSR-------------GPLTVGTSERTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGQALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLSKSQGQEAVPRRLSNPNEETERLSVGEVVPDTNTDEFAEE 827          
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5JM59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM59_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 2.500e-64
Identity = 128/169 (75.74%), Postives = 135/169 (79.88%), Query Frame = 2
Query:   47 EAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGGE 553
            +AFGTHVDPAKSR+P  RKVI TVK V+EHIR+SPRAK  F                   A     GV NVLEAVIVNRAAIDGVYT EGKDSPLTSLTDEIDEL+SIIKPAAQVIVKCQQTSVPT Q+AVL+LAALKLTTLNVDSPLEILTPARKLAQAGTSGIGG E
Sbjct:  150 DAFGTHVDPAKSRSPVVRKVIATVKMVMEHIRKSPRAKVSF-------------------AVVIGCGVTNVLEAVIVNRAAIDGVYTTEGKDSPLTSLTDEIDELFSIIKPAAQVIVKCQQTSVPTVQLAVLALAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGRE 299          
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 3.240e-58
Identity = 103/109 (94.50%), Postives = 105/109 (96.33%), Query Frame = 2
Query: 1163 MWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSK-YVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 1486
            MWAH YPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSR TMDS  YVEMI+FLHGNLDLIPEDITKLTEAVAR+KIPGRLANPVEGLEQLDGAFAPVDLTDEEASD
Sbjct:    1 MWAHVYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLTEAVARSKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 109          
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 5.200e-58
Identity = 105/117 (89.74%), Postives = 110/117 (94.02%), Query Frame = 2
Query:   11 WCVCHMINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDEL 361
            WCVCHMINCALVEAFGTHVD AKSRNPGARKVIT  KKVVEHI +SPRAKAIFE+EQVRQYAQCYHRKLVNAAPQRWSGV NVLEAVIVNRAA++ VYT EGKDSPLTSLT+EIDEL
Sbjct:  337 WCVCHMINCALVEAFGTHVDSAKSRNPGARKVITMGKKVVEHIPKSPRAKAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 453          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ82_9PHAE3.270e-28385.98Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JNY1_9PHAE3.140e-24677.44Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LBK4_ECTSI5.360e-18060.16Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LFP4_ECTSI3.570e-15955.15Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JML0_9PHAE1.210e-14179.17Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KEK6_9PHAE3.540e-12751.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVU5_9PHAE1.830e-6835.77Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JM59_9PHAE2.500e-6475.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCJ3_9PHAE3.240e-5894.50Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KWS6_9PHAE5.200e-5889.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:1972642..1975168 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score97.1
Seed ortholog evalue2.5e-17
Seed eggNOG ortholog2880.D7G4Z8
Hectar predicted targeting categoryother localisation
EggNOG OGs2CZK4@1,2SARG@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1930
Cds size1464
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1265.1prot_C-linearis_contig11.1265.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 1972667..1974727 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927448.9369853-UTR-C-linearis_contig11:1972641..19726661622927448.9369853-UTR-C-linearis_contig11:1972641..1972666Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 1972642..1972666 +
1690879706.803303-UTR-C-linearis_contig11:1972641..19726661690879706.803303-UTR-C-linearis_contig11:1972641..1972666Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 1972642..1972666 +
1622927448.99885-UTR-C-linearis_contig11:1974727..19751681622927448.99885-UTR-C-linearis_contig11:1974727..1975168Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 1974728..1975168 +
1690879706.84251-UTR-C-linearis_contig11:1974727..19751681690879706.84251-UTR-C-linearis_contig11:1974727..1975168Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 1974728..1975168 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927448.9535248-CDS-C-linearis_contig11:1972666..19726901622927448.9535248-CDS-C-linearis_contig11:1972666..1972690Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1972667..1972690 +
1690879706.813386-CDS-C-linearis_contig11:1972666..19726901690879706.813386-CDS-C-linearis_contig11:1972666..1972690Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1972667..1972690 +
1622927448.9680278-CDS-C-linearis_contig11:1973054..19731651622927448.9680278-CDS-C-linearis_contig11:1973054..1973165Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1973055..1973165 +
1690879706.8233516-CDS-C-linearis_contig11:1973054..19731651690879706.8233516-CDS-C-linearis_contig11:1973054..1973165Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1973055..1973165 +
1622927448.981091-CDS-C-linearis_contig11:1973398..19747271622927448.981091-CDS-C-linearis_contig11:1973398..1974727Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1973399..1974727 +
1690879706.832644-CDS-C-linearis_contig11:1973398..19747271690879706.832644-CDS-C-linearis_contig11:1973398..1974727Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1973399..1974727 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1265.1

>prot_C-linearis_contig11.1265.1 ID=prot_C-linearis_contig11.1265.1|Name=mRNA_C-linearis_contig11.1265.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=488bp
MINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEE
EQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDS
PLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLN
VDSPLEILTPARKLAQAGTSGIGGGERPATSTPREHSLLTGVAKGTRQHM
CESVDWRWFDKRYKSAESQHTDYVFDMQMALHATTADLRYVDKLASTSAF
AGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQ
AAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPGGDGQDEEPPSLEQTA
RAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPA
SAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTE
AVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD*
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mRNA from alignment at C-linearis_contig11:1972642..1975168+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1265.1 ID=mRNA_C-linearis_contig11.1265.1|Name=mRNA_C-linearis_contig11.1265.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2527bp|location=Sequence derived from alignment at C-linearis_contig11:1972642..1975168+ (Chordaria linearis ClinC8C monoicous)
GGCTGTGGGGTGGTGTGTGTGCCACATGATCAACTGCGCGTTGGTCGAGG TGAGGTTGCGATGGTGGTGGGTTTCCGCCGTACTCAGTTTTGGCGATGCA TGCGTTCTACACAAGTCCTGGGCTTTCGGTCGTCGTTTTTGGTGAAAGGC GAAAAGTGTACTGAAATAGATCGCCGTGAGCTACGGCTGCTTCCTCAGTT GAGTTTTGAAAGGAGACGTGCGGTTTACCAGATGCCCAAGCAGCAGTAGT ATGTAGTACGGCGTAAGAAACGAGCGAGAGGCACGAATGCGTAGACGCGC TTGTTGGGGTGCAGGACGAGAGATCGTTCGTGGTGCTCCCTGTCCTTTGC GCGACAAATACAAATAATTTTATTGAGATTGATTGATCCGCTCGCTCACG TCCTGGATGGCAGGCGTTCGGTACGCACGTGGATCCGGCCAAGTCGAGAA ACCCCGGTGCACGCAAAGTGATCACGACGGTGAAAAAGGTCGTGGAGCAC ATCCGCCAATCTCCCAGAGCGAAGGTCAGTTTTGCCGTGGTGATTGGCTG TGGTGATGTATCGCTACCAACGATTACGAGTGGTTCACGTACCAGTAGGT GTCAATGCTTGTTTTCACAAGAGAGTTATCTGCGAATTACTCGCGTAACT ACTTCTCATGATGTTTGAATTGTCGTGCGAGCACCACCCCGCGAATTACA TCTTCAGAATTCCTCACGTGTCGAAACACGCTACCCTCGCGCCCCCCCAC TAAACAGGCCATCTTCGAGGAGGAGCAGGTCCGGCAGTACGCGCAGTGCT ACCACCGCAAGCTGGTCAACGCCGCACCCCAGCGGTGGTCAGGGGTGGCA AACGTCTTGGAGGCGGTCATCGTCAACCGTGCAGCCATAGACGGCGTGTA CACGGCGGAAGGCAAGGACAGTCCGCTCACGTCCCTGACGGACGAGATCG ACGAGCTGTACTCCATCATCAAGCCGGCCGCGCAAGTCATCGTCAAGTGC CAGCAGACGTCTGTCCCTACCGGGCAAGTTGCGGTGCTTTCCCTGGCGGC GCTCAAGCTCACTACGCTCAACGTCGACTCCCCGCTCGAGATTTTGACCC CGGCGCGCAAGCTGGCTCAGGCTGGGACAAGCGGCATTGGTGGCGGGGAG CGACCGGCCACCAGCACTCCCCGCGAGCACAGCTTGTTGACTGGCGTAGC CAAGGGTACTCGCCAGCACATGTGCGAGTCCGTTGACTGGCGGTGGTTCG ACAAGCGCTACAAGAGCGCCGAGAGCCAACACACGGACTACGTGTTCGAC ATGCAGATGGCCTTGCACGCGACCACGGCTGACCTGCGGTACGTGGACAA GCTCGCGTCAACGTCAGCGTTCGCTGGTGCTGTCAAGTCGACCATCACCG ACAAGGTCATCTCCTTGGCTGTGAAGCTGGCGGAGGCAGCGGCACTCGAC ACGGGGGACGTATCAACGACGCCTGCCGGGTCTGCTGCTGCCGATGAGCC CGCTGCCAAACGTGCTCGTCAAGCGGCTGCTCCCGGGAGCGTGCACCCCA TGTTCAAGGCCCCCGTCAACAAGAGGGAGGAGGCGACTACAAACATGTAT GCCAGCCTCGGCCTGTTTGGGCCAGGGGGTGATGGGCAGGACGAGGAGCC GCCATCTTTGGAGCAGACTGCTCGCGCCGAGCTCACCAAGCTGAGGGCTG TCCAGGGCGGCAGTCTCGCGGCCGGGTTGAGTTGCGAGGATGTGCTCAAG TGGTGGAAGATGTGGGCCCACGCCTACCCGCTTCTGGCTAGGGTTGCACG CGTGGTTTTCGGGGCTCCTGCATCGGCGGCAGTGCTCGAGCGTGATTTCA GCAATGCTGGGCGAATGATGACTTCCTCCAGGAGCACCATGGACAGCAAG TACGTGGAGATGATTATGTTCCTGCACGGGAACCTGGACCTCATCCCCGA GGACATCACCAAGCTGACCGAGGCTGTTGCGCGAACGAAGATCCCCGGGC GGTTGGCGAACCCCGTCGAGGGGCTGGAGCAGCTCGATGGCGCTTTCGCG CCGGTGGACCTCACCGATGAGGAGGCGTCGGATTAAAAGCTTGGGGCAGT AGCATGGGGAAGGGTGGCGCGGTTGCGCTTGATGGCGGTCAGGCCGGCCG CAAGAACGAGCTGGCTGCCGAGAGGTCGTGGGTGGATCTTTGAGCTTTGC CGATACTTGCCACGAGACGACCGTGGTCTCTGGTCACGAGAGGATTACCG GGATGGTGGTCGGTTGGTCTGTTGCAATTTATCCTTCTTCGTTCTGGGTG GCTTCAACTCGCGTAAACGATGATGATGGACGTAATGTAATAAGTATATA GTCGGGGCAAAACTCATTGTTTTTTTTGTCCCTTCGATTGACTTCATCTT GTTGATTTACGTCTCGATGACGGTGGCTCAGATACACGCACGCACTATTG ATTCGAGGATGCACGTTTCCGGAACCAATCTTCCATCCAATGGCATCAGG CTGGGCTCCCTCCGGTCCCCCGCCCCC
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Coding sequence (CDS) from alignment at C-linearis_contig11:1972642..1975168+

>mRNA_C-linearis_contig11.1265.1 ID=mRNA_C-linearis_contig11.1265.1|Name=mRNA_C-linearis_contig11.1265.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2928bp|location=Sequence derived from alignment at C-linearis_contig11:1972642..1975168+ (Chordaria linearis ClinC8C monoicous)
ATGATCAACTGCGCGTTGGTCGAGATGATCAACTGCGCGTTGGTCGAGGC
GTTCGGTACGCACGTGGATCCGGCCAAGTCGAGAAACCCCGGTGCACGCA
AAGTGATCACGACGGTGAAAAAGGTCGTGGAGCACATCCGCCAATCTCCC
AGAGCGAAGGCGTTCGGTACGCACGTGGATCCGGCCAAGTCGAGAAACCC
CGGTGCACGCAAAGTGATCACGACGGTGAAAAAGGTCGTGGAGCACATCC
GCCAATCTCCCAGAGCGAAGGCCATCTTCGAGGAGGAGCAGGTCCGGCAG
TACGCGCAGTGCTACCACCGCAAGCTGGTCAACGCCGCACCCCAGCGGTG
GTCAGGGGTGGCAAACGTCTTGGAGGCGGTCATCGTCAACCGTGCAGCCA
TAGACGGCGTGTACACGGCGGAAGGCAAGGACAGTCCGCTCACGTCCCTG
ACGGACGAGATCGACGAGCTGTACTCCATCATCAAGCCGGCCGCGCAAGT
CATCGTCAAGTGCCAGCAGACGTCTGTCCCTACCGGGCAAGTTGCGGTGC
TTTCCCTGGCGGCGCTCAAGCTCACTACGCTCAACGTCGACTCCCCGCTC
GAGATTTTGACCCCGGCGCGCAAGCTGGCTCAGGCTGGGACAAGCGGCAT
TGGTGGCGGGGAGCGACCGGCCACCAGCACTCCCCGCGAGCACAGCTTGT
TGACTGGCGTAGCCAAGGGTACTCGCCAGCACATGTGCGAGTCCGTTGAC
TGGCGGTGGTTCGACAAGCGCTACAAGAGCGCCGAGAGCCAACACACGGA
CTACGTGTTCGACATGCAGATGGCCTTGCACGCGACCACGGCTGACCTGC
GGTACGTGGACAAGCTCGCGTCAACGTCAGCGTTCGCTGGTGCTGTCAAG
TCGACCATCACCGACAAGGTCATCTCCTTGGCTGTGAAGCTGGCGGAGGC
AGCGGCACTCGACACGGGGGACGTATCAACGACGCCTGCCGGGTCTGCTG
CTGCCGATGAGCCCGCTGCCAAACGTGCTCGTCAAGCGGCTGCTCCCGGG
AGCGTGCACCCCATGTTCAAGGCCCCCGTCAACAAGAGGGAGGAGGCGAC
TACAAACATGTATGCCAGCCTCGGCCTGTTTGGGCCAGGGGGTGATGGGC
AGGACGAGGAGCCGCCATCTTTGGAGCAGACTGCTCGCGCCGAGCTCACC
AAGCTGAGGGCTGTCCAGGGCGGCAGTCTCGCGGCCGGGTTGAGTTGCGA
GGATGTGCTCAAGTGGTGGAAGATGTGGGCCCACGCCTACCCGCTTCTGG
CTAGGGTTGCACGCGTGGTTTTCGGGGCTCCTGCATCGGCGGCAGTGCTC
GAGCGTGATTTCAGCAATGCTGGGCGAATGATGACTTCCTCCAGGAGCAC
CATGGACAGCAAGTACGTGGAGATGATTATGTTCCTGCACGGGAACCTGG
ACCTCATCCCCGAGGACATCACCAAGCTGACCGAGGCTGTTGCGCGAACG
AAGATCCCCGGGCGGTTGGCGAACCCCGTCGAGGGGCTGGAGCAGCTCGA
TGGCGCTTTCGCGCCGGTGGACCTCACCGATGAGGAGGCGTCGGATTAAG
CCATCTTCGAGGAGGAGCAGGTCCGGCAGTACGCGCAGTGCTACCACCGC
AAGCTGGTCAACGCCGCACCCCAGCGGTGGTCAGGGGTGGCAAACGTCTT
GGAGGCGGTCATCGTCAACCGTGCAGCCATAGACGGCGTGTACACGGCGG
AAGGCAAGGACAGTCCGCTCACGTCCCTGACGGACGAGATCGACGAGCTG
TACTCCATCATCAAGCCGGCCGCGCAAGTCATCGTCAAGTGCCAGCAGAC
GTCTGTCCCTACCGGGCAAGTTGCGGTGCTTTCCCTGGCGGCGCTCAAGC
TCACTACGCTCAACGTCGACTCCCCGCTCGAGATTTTGACCCCGGCGCGC
AAGCTGGCTCAGGCTGGGACAAGCGGCATTGGTGGCGGGGAGCGACCGGC
CACCAGCACTCCCCGCGAGCACAGCTTGTTGACTGGCGTAGCCAAGGGTA
CTCGCCAGCACATGTGCGAGTCCGTTGACTGGCGGTGGTTCGACAAGCGC
TACAAGAGCGCCGAGAGCCAACACACGGACTACGTGTTCGACATGCAGAT
GGCCTTGCACGCGACCACGGCTGACCTGCGGTACGTGGACAAGCTCGCGT
CAACGTCAGCGTTCGCTGGTGCTGTCAAGTCGACCATCACCGACAAGGTC
ATCTCCTTGGCTGTGAAGCTGGCGGAGGCAGCGGCACTCGACACGGGGGA
CGTATCAACGACGCCTGCCGGGTCTGCTGCTGCCGATGAGCCCGCTGCCA
AACGTGCTCGTCAAGCGGCTGCTCCCGGGAGCGTGCACCCCATGTTCAAG
GCCCCCGTCAACAAGAGGGAGGAGGCGACTACAAACATGTATGCCAGCCT
CGGCCTGTTTGGGCCAGGGGGTGATGGGCAGGACGAGGAGCCGCCATCTT
TGGAGCAGACTGCTCGCGCCGAGCTCACCAAGCTGAGGGCTGTCCAGGGC
GGCAGTCTCGCGGCCGGGTTGAGTTGCGAGGATGTGCTCAAGTGGTGGAA
GATGTGGGCCCACGCCTACCCGCTTCTGGCTAGGGTTGCACGCGTGGTTT
TCGGGGCTCCTGCATCGGCGGCAGTGCTCGAGCGTGATTTCAGCAATGCT
GGGCGAATGATGACTTCCTCCAGGAGCACCATGGACAGCAAGTACGTGGA
GATGATTATGTTCCTGCACGGGAACCTGGACCTCATCCCCGAGGACATCA
CCAAGCTGACCGAGGCTGTTGCGCGAACGAAGATCCCCGGGCGGTTGGCG
AACCCCGTCGAGGGGCTGGAGCAGCTCGATGGCGCTTTCGCGCCGGTGGA
CCTCACCGATGAGGAGGCGTCGGATTAA
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