mRNA_C-linearis_contig11.1265.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 800 bits (2065), Expect = 3.270e-283 Identity = 423/492 (85.98%), Postives = 433/492 (88.01%), Query Frame = 2
Query: 11 WCVCHMINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGGERPATSTPREHSLLTGVAKGTRQHMCESVDWRWFDKRYKSAESQHTDYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPGGDGQDEEPPSLEQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 1486
WCVCHMINCALVEAFGTHVDPAKS NPGARKVITTVKKVVEHIR+SPRAKAIFEEEQV+QYAQCYHRKLVNAAPQRWSGV NVLEAVIVNRAAIDGVYTAEGKDSPLTSLT+EIDELYSIIKPAAQVIVKCQQTSVPTGQVAVL+LAALKL TLNVDSPLEILTPARKLAQA TSGIGGGERPATSTPREHSL TGVAKGTRQH+CESVDW WFDKRYKSAESQ TDYV + + +T AAL TGDVSTTPAGSAAADEPAAKRARQAAAPGSVHP+FKAPVNKREEATTNMYASLGLFGPGGD Q+EEPPS EQTARAELT LRAVQGGSLA GLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEA ARTKIPGRLANPVE LEQLDG FAPVDLTDEEASD
Sbjct: 263 WCVCHMINCALVEAFGTHVDPAKSGNPGARKVITTVKKVVEHIRKSPRAKAIFEEEQVQQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAIDGVYTAEGKDSPLTSLTEEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQAETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRYKSAESQDTDYVSTCRWPC----------------------TRPRLT------------CAALHTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPLFKAPVNKREEATTNMYASLGLFGPGGDEQNEEPPSFEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAARTKIPGRLANPVERLEQLDGVFAPVDLTDEEASD 720
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 697 bits (1798), Expect = 3.140e-246 Identity = 381/492 (77.44%), Postives = 391/492 (79.47%), Query Frame = 2
Query: 11 WCVCHMINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGGERPATSTPREHSLLTGVAKGTRQHMCESVDWRWFDKRYKSAESQHTDYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPGGDGQDEEPPSLEQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 1486
WCVCHM+NCA+V+AFG HVDPAKSRNPGARKVITTVK +VEHIR+SPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGV NVLEAVIVNR AIDGVY AEGK SPLTSLTDEIDEL+ IIKPAAQVIV GERPATSTPREHSLLTGVA+GTRQHMCESVDWRWFDKRYKSA+SQ TDYVFDMQMALH TTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAAL TGD STTPA SAAAD+PAAKRARQAAAPGS EEPPS EQTARAELTKLRAVQGGSLAAGL CEDVLKWWKMWAHAYPLLARVARVV GA ASAAVLE DFSNAGRMMTSSRSTMDSKYVEMI+FLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD
Sbjct: 84 WCVCHMMNCAVVKAFGMHVDPAKSRNPGARKVITTVKTIVEHIRKSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRPAIDGVYAAEGKHSPLTSLTDEIDELHYIIKPAAQVIVS-------------------------------------------------GERPATSTPREHSLLTGVARGTRQHMCESVDWRWFDKRYKSAKSQDTDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALHTGDGSTTPAWSAAADKPAAKRARQAAAPGS---------------------------------KEEPPSFEQTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 493
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 535 bits (1378), Expect = 5.360e-180 Identity = 296/492 (60.16%), Postives = 353/492 (71.75%), Query Frame = 2
Query: 14 CVCHMINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQS--PRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGGERPATSTPREHSLLTGVAKGTRQHMCESVDWRWFDKRYKSAESQHT-DYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPG-GDGQDEEPPSLEQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEE 1477
CVCHM+NC+LVEA GT VD K NP ARKV+ VKKVVEHIR+S P AKAIF+EEQVR Y+QC HRKLVN APQRWSGV+ VLEA IVNR IDGVY EG +PL +EIDELYS+IKP A++IV CQQT VPTGQ AVL LA LKL+T NVD+ L++LTP R AQ G GGGER ATS PR H+ LT V + R+H+ ++D R+FD+ YKSA+S+ T D+VFDMQM LH TTADL+YVDKL ST A VK +ITDK+I+LAV+LAE ++ AG DE AKRAR AAAPGS+ NK+++A T +ASLGLF G G+ + P+ E ARAEL LR V+ G+L LSCE VL+WWK W YPLLAR ARVVFGAPASAAVLERDF++A MM SSRS D+KYVEM++FLHGNLDLIPE I +L + + KIPGRL+NP+ L LDG VDLT++E
Sbjct: 175 CVCHMLNCSLVEAIGTRVDSRKPGNPAARKVVLAVKKVVEHIRRSKSPGAKAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVGIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVR--AQGWPEGTGGGERKATSVPRLHNHLTQVGRDAREHLASALDRRYFDRCYKSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEK------EMERKQAGPEQ-DESVAKRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQAKIPGRLSNPIPELHGLDGTLGLVDLTNDE 657
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 485 bits (1248), Expect = 3.570e-159 Identity = 273/495 (55.15%), Postives = 336/495 (67.88%), Query Frame = 2
Query: 11 WCVCHMINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGGERPATSTPREHSLLTGVAKGTRQHMCESVDWRWFDKRYKSAESQHTDYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPGGDGQDEEPPSLEQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKL-TEAV--ARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 1486
WCVCHM++ +L EA GT V P + AR V+ VKK VE +R+SP +K IF EEQV Q++QC +RK+VNAAPQRWSGV LEA + NRAAI+GVY EG+DSPL+ EIDELYS+I+P A+VI CQQT PTGQ AVL LAALKL+TLN D+PL+ILTPA K Q T G GG +R +T R H LT V + R+H+ ++ WR FDKRYKS ++ T VFDMQM LH TADL+YV +LA T A VK ITDK+I+LA KLA+ A G A EPAAKRA QA+APG+ +PMF + +E TT + A LGL +G P +E+ ARAEL LR+ +L SCE VL WWK H+YPLLARVARVVF APAS V ERD +AGRMMTSSRST D+KYVEM++FLHGN+DL+PE I +L + V +TKIPGRL+NP+ L LDG F PVDLT+++ S+
Sbjct: 284 WCVCHMLSDSLAEAVGTCVGPQQPGGRAARNVVMAVKKAVERVRKSPASKDIFTEEQVIQFSQCSNRKVVNAAPQRWSGVTGALEATVTNRAAINGVYAEEGEDSPLSPHVHEIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGGEQR---TTARAHKDLTRVGREAREHLASALHWRDFDKRYKSTVAKSTGLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADKKAERKGI-------EAEQGEPAAKRAPQASAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASP--IER-ARAELETLRSASDDALFGDTSCEGVLNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSNPMLELHALDGEFGPVDLTNDDESE 765
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE) HSP 1 Score: 421 bits (1083), Expect = 1.210e-141 Identity = 228/288 (79.17%), Postives = 235/288 (81.60%), Query Frame = 2
Query: 623 MCESVDWRWFDKRYKSAESQHTDYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPGGDGQDEEPPSLEQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 1486
MCESVDWR FDKRYKSAESQ TDYVFDMQMALH TTA LRYV+KLASTSAFAGAVKSTITDKVI L V+LAEAAAL TGD STTPAG EEATTNM+ASLGLFGPG DGQ+EEP S +QTARAELTKLRAVQGG LAA L CEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLE FSNAGRM TSSRSTMDS YVEMIMFLHGNL+LIPEDITKLTE VARTK PGRLANPV+GLE LDGAFAPVDLTDEEASD
Sbjct: 1 MCESVDWRRFDKRYKSAESQDTDYVFDMQMALHPTTAGLRYVEKLASTSAFAGAVKSTITDKVIFLTVRLAEAAALHTGDGSTTPAG--------------------------------EEATTNMHASLGLFGPGVDGQNEEPQSFKQTARAELTKLRAVQGGRLAARLRCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKLTEVVARTKFPGRLANPVDGLEPLDGAFAPVDLTDEEASD 256
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE) HSP 1 Score: 392 bits (1006), Expect = 3.540e-127 Identity = 247/480 (51.46%), Postives = 289/480 (60.21%), Query Frame = 2
Query: 50 AFGTHVDPAKSRNPGARKVITTVKKVVEHIRQS--PRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGGERPATSTPREHSLLTGVAKGTRQHMCESVDWRWFDKRYKSAES-QHTDYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFGPGGDGQD-EEPPSLEQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEE 1477
A GT VD K N ARK++ VKKVVEHIR+S P A+AIF+EEQVR Y+QC HRKLVN APQRWSGV VLEA IVNR IDGVY EG +PL +IDELYS+IKP A++IV QQT VPTGQ A L LAALKL+T NVD+ L++LTPAR AQ G GG E ATS PR C YK A+S + TD+VFDMQM LH TTADL+YVDKLAS+ A V ITDK+I+LAV+LA T ++ AG E AK+AR AAAP S HP NK E+A T + SL LF G + + P+ E A AE LR V+ GSL L CE VLKWW+ W +YPLLAR ARV FGAPA+ D+KYVEM++FLHG LDL PE I +L + KIPGRL+NPV L LDG PVDLT +E
Sbjct: 13 AIGTRVDSRKPGNRAARKMVLAVKKVVEHIRKSKSPGAQAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVGGVLEATIVNRVDIDGVYAREGSVNPLAPHEHDIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPAR--AQGRPEGAGGVEPKATSVPR----------------C-----------YKPADSAKTTDFVFDMQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELA------TKEMERKQAGPEQ-HESVAKQARPAAAPKSSHPAVARARNKNEDAATAKFTSLRLFKKRRVGANASQQPTFEPMACAEFETLRGVEAGSLTDDLGCEGVLKWWEKWEGSYPLLARAARVDFGAPAAG---------------------DAKYVEMVLFLHGKLDLFPEQIPELRDEDIHAKIPGRLSNPVPELHGLDGTLGPVDLTHDE 435
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE) HSP 1 Score: 248 bits (634), Expect = 1.830e-68 Identity = 181/506 (35.77%), Postives = 265/506 (52.37%), Query Frame = 2
Query: 11 WCVCHMINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVY--TAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQ---AGTSGIGGGERPATSTPREHSLLTGVAKGTRQHMCESVDWRWFDKRYKS--AESQHTDYVFDMQMALHATTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALDTGDVST-TPAGSAAADEPAAKRARQAAAPGSVHPMFKAPVNKREEATTNMYASLGLFG--PGGDGQDEEPPSL--EQTARAELTKLRAVQGGSLAAGLSCEDVLKWWKMWAHA-YPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLD-GAFAPVDLTDEEASD 1486
WC HM+NC LVEAFGT+ A +N GAR+VI TVKKVVEH+ +S KA +++ QV Y + KLVNA P RW NVLE ++ + A++ Y +G PL I+ELYS++KP + ++ + Q+ +PTG +L L+ TL+V PLE+ P RK+ A T ERPA S L V TR + ++D R+F KRY + +DYVF+M + L ++ + S+ AG V I KV+ L VKLAE A G + +G++A+ P KR+R P+ T G+FG +D+ P L ++ + E + A + + E +L++W A YP +AR ARV+ PAS+AVLERDFS AGR++T +RS + + YVEM++FL+GN + IP ++ KL+++ + +P RL+NP E E+L G P TDE A +
Sbjct: 345 WCFPHMLNCVLVEAFGTNASRAACKNLGARQVIDTVKKVVEHLNKSTLMKARYDDIQVLLYGKSM--KLVNAVPHRWISTCNVLEEILRSWQALEEHYQKNEQGGSFPLAQHKTVIEELYSLMKPISVIMKESQEKGLPTGLSTFAALVMLRADTLDVTKPLEVTVP-RKVTTTDWARTLATTTIERPADS-------LQDVTTTTRTMLAAALDKRFFSKRYDANVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKLAEGAGAYPGKATEGDTSGASASAPPPFKRSR-------------GPLTVGTSERTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGQALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLSKSQGQEAVPRRLSNPNEETERLSVGEVVPDTNTDEFAEE 827
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5JM59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM59_9PHAE) HSP 1 Score: 223 bits (569), Expect = 2.500e-64 Identity = 128/169 (75.74%), Postives = 135/169 (79.88%), Query Frame = 2
Query: 47 EAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLSLAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGGE 553
+AFGTHVDPAKSR+P RKVI TVK V+EHIR+SPRAK F A GV NVLEAVIVNRAAIDGVYT EGKDSPLTSLTDEIDEL+SIIKPAAQVIVKCQQTSVPT Q+AVL+LAALKLTTLNVDSPLEILTPARKLAQAGTSGIGG E
Sbjct: 150 DAFGTHVDPAKSRSPVVRKVIATVKMVMEHIRKSPRAKVSF-------------------AVVIGCGVTNVLEAVIVNRAAIDGVYTTEGKDSPLTSLTDEIDELFSIIKPAAQVIVKCQQTSVPTVQLAVLALAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGRE 299
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE) HSP 1 Score: 200 bits (509), Expect = 3.240e-58 Identity = 103/109 (94.50%), Postives = 105/109 (96.33%), Query Frame = 2
Query: 1163 MWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSK-YVEMIMFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 1486
MWAH YPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSR TMDS YVEMI+FLHGNLDLIPEDITKLTEAVAR+KIPGRLANPVEGLEQLDGAFAPVDLTDEEASD
Sbjct: 1 MWAHVYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLTEAVARSKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 109
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE) HSP 1 Score: 211 bits (538), Expect = 5.200e-58 Identity = 105/117 (89.74%), Postives = 110/117 (94.02%), Query Frame = 2
Query: 11 WCVCHMINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVANVLEAVIVNRAAIDGVYTAEGKDSPLTSLTDEIDEL 361
WCVCHMINCALVEAFGTHVD AKSRNPGARKVIT KKVVEHI +SPRAKAIFE+EQVRQYAQCYHRKLVNAAPQRWSGV NVLEAVIVNRAA++ VYT EGKDSPLTSLT+EIDEL
Sbjct: 337 WCVCHMINCALVEAFGTHVDSAKSRNPGARKVITMGKKVVEHIPKSPRAKAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 453 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1265.1 >prot_C-linearis_contig11.1265.1 ID=prot_C-linearis_contig11.1265.1|Name=mRNA_C-linearis_contig11.1265.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=488bp MINCALVEAFGTHVDPAKSRNPGARKVITTVKKVVEHIRQSPRAKAIFEEback to top mRNA from alignment at C-linearis_contig11:1972642..1975168+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1265.1 ID=mRNA_C-linearis_contig11.1265.1|Name=mRNA_C-linearis_contig11.1265.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2527bp|location=Sequence derived from alignment at C-linearis_contig11:1972642..1975168+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:1972642..1975168+ >mRNA_C-linearis_contig11.1265.1 ID=mRNA_C-linearis_contig11.1265.1|Name=mRNA_C-linearis_contig11.1265.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2928bp|location=Sequence derived from alignment at C-linearis_contig11:1972642..1975168+ (Chordaria linearis ClinC8C monoicous)back to top |