mRNA_C-linearis_contig11.1262.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1262.1 vs. uniprot
Match: A0A6H5L6M1_9PHAE (UBA domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M1_9PHAE) HSP 1 Score: 748 bits (1930), Expect = 9.040e-227 Identity = 772/1124 (68.68%), Postives = 816/1124 (72.60%), Query Frame = 2
Query: 239 RAEKDGRTDSXXXXXXXXXXXXXXX-----HQNRTTIMSLLLSELVLRHEGAVRRSASQAXXXXXXXXXXXXVGPAEEAGAAAAEFMSEANLLELVSDLVLHLPACATSVHRFGQRERSSPHAARLLAPVPGDAVAPRPGSAAAVARAIRLLQAQRHAVAGARPPSPTVVAFLLHVLLPSPRAGDAAAKGIADPEERRRCKALSALQGRKAQAAARLLLALCARAGEGRRRVLAELYSSLSCNSSADRGSADGSGG--------TRRTDREMWALQAWGELALGLAAPRAVHAAGNDYGNQTLAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLTRASVADSMRRMKAKDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLDSATPTRRTRGRRRETRTPGDAAATXXXXXXXXXXXXRTPGRTRTPSRRRVAAEGAAXXXXXXXXXXXXXXXXXXXGASGSPAQNAXXXXXXXXXXXXTSRGSXXXXXXXXXXXGS---------ARRVARGTSRDSRMGSHSFADDDVMLDEAFGGQQVGGRRDDDMLVEVDLSAIVADMEDGGEGVVGRHGAQGVVADFINMHEDS--PXXXXXXXXXXXXXXXXXXXXXXXLGS--VPIHQ-QSDSAGEHSSDGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXGGEAELG-QGVDG--DAMEEXXXXXXXXXXXXXXXXXXXXXIDEEEIDLDDEHGGDDGDGHLEEDGMYVLGGPDDGMPQDIEWGDSDDLLGNAQDVGAFYAQVGWDPGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD----------------------GGEAWVARGAQADYLSMWGVQPPPGLARQYATRHGDRAGGTNMMAMPDFMESDSNALSQILRSVAPPGPGGAGPPPLVRVVRGAGA-EGRWTEMIMHDLHAPAPGPSQNTTRLFPDGPSAATQAHAALVVHPLLIRQTRTHGNSGGSSRSXXXXXXXXXXXXXXXXXXXTVPTARQQAALGLLPAERLIWDGHAGGGXXXXXXXXXXXXAMAEQTLIHAIE 3451
R E+DGRTDS HQNRTTIMSLLLSEL+LRHEG XXXXXXXXXXXX EF+ ANLLEL+SDLVLHLPACATS+HRFGQRERSS +AARLLAPVPGDAVAPRPGSAA VARA+RLLQAQRHAVAGA PSPTVVAFLLHVLLPSPRAGD AAKGI D EERR+ KALSALQGRKAQAAARLLLALCARAGEGRRRVLAELYS+LSCN ADRG+ G G +RTDREMWALQAWGELALGLAAPRAVHA GNDYGNQTLAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLTRASVADSMRRMKAKDD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T TPG AA XXXXXXXXXXXX XXXXXXXXXXXXXXX XXXXXXXXXXXX XXXXXXX G RR+ RGTSRDSR+GSHSFADDDVML AFGGQ G R DDMLVEVDLSAI+ADMEDG EG V RHG VA F++MH+D PXXXXXXXXXXXXXXXXXXXXXXX G+ + H+ QSDS GEHS D S+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G EAE+G QGVD D M+E XXXXXXXXXXXXXXXXXX D D GDD DGH +++ MYVLGGPDDG+ +W D D+ Q++ A YAQVGWDPGAAXXXXXXXXXXXXXX XXXXXXXXX GGE W+ARGA A+ LSMWGVQPPPGLARQYATRHG+R GG NMM M DFMESDS AL+Q+LRS+ P G GGAG PPLVRVVRG G + WTEMI HDLHA APGPS NTTRLFPDGPSAATQAHAA VVHPLL+R R G++G S XXXXXXXXXXXXXXXXXXX RQQ+ LG+LP ERLIW XXXXXXXXX M EQTL+ AIE
Sbjct: 1304 RVERDGRTDSGGSNGAGAATGGSGSFAAAPHQNRTTIMSLLLSELILRHEGVXXXXXXXXXXXXXXXXXXXX---------GTTEFLGVANLLELLSDLVLHLPACATSIHRFGQRERSSSYAARLLAPVPGDAVAPRPGSAAGVARALRLLQAQRHAVAGAAAPSPTVVAFLLHVLLPSPRAGDTAAKGIVDAEERRKRKALSALQGRKAQAAARLLLALCARAGEGRRRVLAELYSALSCN--ADRGTGGGGGRGSVANERRDQRTDREMWALQAWGELALGLAAPRAVHAVGNDYGNQTLAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLTRASVADSMRRMKAKDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------ASTPGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGXXXXXXXXXXGRRITRGTSRDSRLGSHSFADDDVMLXMAFGGQPAG--RTDDMLVEVDLSAIIADMEDGDEGGV-RHGRGDAVATFMDMHDDEGDPXXXXXXXXXXXXXXXXXXXXXXXAGAGLMATHRPQSDSGGEHSEDRSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHG----------GHEAEMGGQGVDREEDVMDEEDDXXXXXXXXXXXXXXXXXXX----XDFDGGEDGDD-DGHRDDEDMYVLGGPDDGLS--FDWADVHDITVGPQELDAIYAQVGWDPGAAXXXXXXXXXXXXXXETIPVQSAXXXXXXXXXRAGGRPGVPPVFQQAMDAGAXXXIGLGGGGGEGWIARGATAEQLSMWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDS-ALNQMLRSLTPQGAGGAGAPPLVRVVRGTGGGDTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTG--SGXXXXXXXXXXXXXXXXXXXXXXXGGRQQSVLGMLPNERLIWG-------XXXXXXXXXVVGMPEQTLVDAIE 2380
BLAST of mRNA_C-linearis_contig11.1262.1 vs. uniprot
Match: D7G3W3_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W3_ECTSI) HSP 1 Score: 450 bits (1158), Expect = 1.220e-127 Identity = 480/963 (49.84%), Postives = 530/963 (55.04%), Query Frame = 2
Query: 2798 EAWVARGAQADYLSMWGVQPPPGLARQYATRHGDRAGGTNMMAMPDFMESDSNALSQILRSVAPPGPGGAGPPPLVRVVRGAG-AEGRWTEMIMHDLHAPAPGPSQNTTRLFPDGPSAATQAHAALVVHPLLIRQTRTHGNSGGSSRSXXXXXXXXXXXXXXXXXXXTVPTARQQAALGLLPAERLIWDGHAGG-GXXXXXXXXXXXXAMAEQTLIHAIEQGLNLTVQPGSARNSADPAARXXXXXXXXXXXXXXXXXAG-----MSNEGRWTDNGQPLTLAEGRTVMPMMDQVEQAIVARLLPSQAVEHAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGGDARAARDNVEAMVERAMDSAVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQTAAXXXPAGELLEGIAEGEGAEDGTAGGLAALLQEADFAVATFDAAADTGETPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATAQDGDAM----DVDDGGVEESKGQDGEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEPGGALVCPPGMDPEVFAQLPAEMQQEVIREHRSTMGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXXEQEARNRRMREAPSGGGGSXXXXXXXXXXXAPADPSHAAEMDNASIVATLPPEVRREVLLSADEALLSTLPPNLVAEAMVLRERIPHQAELQAAQXXXXXXXXXXXXXXXXXXXXXXXXXVQAGTRAVHVAAHRXXXXXXXXXXXA---RQVGEAK----NAHEGEWKLEADLKGTDTTPPQVPRETLVMLIRLLHLLTPIRPHRLFQRTVLNLCAGHPTVRRAVIQALVHLIKSDPRRLRIALQ 5632
E W+ARGA A+ LS+WGVQPPPGLARQYATRHG+R GG NMM M DFMESD+ AL+Q+LRSV P G GGAG PPLVRVVRG G A+ WTEMI HDLHA APGPS NTTRLFPDGPSAATQAHAA VVHPLL+R R G++G S XXXXXXXXXXXXXXXXXXX RQQ+ LG+LP ERLIW+ H G XXXXXXXXX M EQTL+ AIE GLNL V P A SA XXXXXXXXXXXXXXXXX M N GRWTDNGQPL LAEGRTV+PM+ Q +QA A LLPS A++ G XXXXXXXXXXXXXXXXXX E AM+S XXXXXXXXXXXXX X X XXXXXXXXXXX XXXXXXXXXXXXXXXX A E ++EGE +AAL + + A +T TPA TA D A ++ G E G DG E L+ G+DPE A LPA+M++EV+ EQEARNRRMREAP GG P DPS A+EMDNAS VATLPPE+RREVLLSAD+ALLSTLPPNLVAEAMV+RERIPHQAE QAAQ XXXXXXXXXXX + A + + XXX A + +G A+ N HEGEWKLEADLKG+DTTPPQVPRET+VMLIRLLHLLTPIRPHRL QRTVLNLCAGHP VRRAV+QALVH+IKSDP RLR+ALQ
Sbjct: 123 EGWIARGATAEQLSLWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDA-ALNQMLRSVTPQGAGGAGAPPLVRVVRGTGGADTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTG-SGXXXXXXXXXXXXXXXXXXXXXXXXGGRQQSVLGMLPNERLIWESHGVPVGGXXXXXXXXXVVGMPEQTLVDAIE-GLNLVV-PADAAGSATRRLXXXXXXXXXXXXXXXXXXXXXXXXRMPNGGRWTDNGQPLPLAEGRTVIPMLAQGDQAFFALLLPSHALKGGGXXXXXXXXXXXXXXXXXXXPR----------------------------------------------------------------ESAMESVAXXXXXXXXXXXXXXXVAAXEXVVEXXXXXXXXXXXRARVAGEARLXXXXXXXXXXXXXXXXM------------------AVEDTASVSEGEA--------VAALASSLSLSPRR-EPAGETATTPAV-----------------------------------TAAGSDAGAPPTAGSLETRGAAEEGGNDG-----------------------------------------AAGAGFALLLQQEDQAELLEAAGLDPEALAALPADMRREVL---------------------------------------EQEARNRRMREAPGNAGG-------------PVDPSRASEMDNASFVATLPPELRREVLLSADDALLSTLPPNLVAEAMVMRERIPHQAEFQAAQAAQAAGYASGVRAGXXXXXXXXXXXXXXXSAARGSSGAQTGSXXXGATNVASAAQAIGAARQALRNTHEGEWKLEADLKGSDTTPPQVPRETVVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPLVRRAVVQALVHMIKSDPHRLRLALQ 862
BLAST of mRNA_C-linearis_contig11.1262.1 vs. uniprot
Match: A0A6H5L8R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R1_9PHAE) HSP 1 Score: 283 bits (725), Expect = 8.450e-77 Identity = 202/297 (68.01%), Postives = 217/297 (73.06%), Query Frame = 2
Query: 4721 GGALVCPPGMDPEVFAQLPAEMQQEVIREHRSTMGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXXEQEARNRRMREAPSGGGGSXXXXXXXXXXXAPADPSHAAEMDNASIVATLPPEVRREVLLSADEALLSTLPPNLVAEAMVLRERIPHQAELQAAQXXXXXXXXXXXXXXXXXXXXXXXXXVQAG------------TRAVHVAAHRXXXXXXXXXXXARQVGEAK----NAHEGEWKLEADLKGTDTTPPQVPRETLVMLIRLLHLLTPIRPHRLFQRTVLNLCAGHPTVR 5563
GG LVCPPGMDP+VFAQLP +MQQEV+REHRST+GSMEDQAELLEAAXXXXXXXXXXXXXXXXXX EQEARNRRMREAP GG PADPS A+EMDNAS VATLPPE+RREVLLSAD+ALLSTLPP+LVAEAMV+RERIPHQA QAA XXXXXXXXXXXXXX + T A + +G A+ N HEGEWKLEAD KG+DTTPPQVPRET+VMLIRLLHLLTPIRPHRL QRTVLNLCAGHP VR
Sbjct: 507 GGGLVCPPGMDPDVFAQLPPDMQQEVVREHRSTVGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMREAPGNAGG-------------PADPSRASEMDNASFVATLPPELRREVLLSADDALLSTLPPDLVAEAMVMRERIPHQAA-QAAGYASGVRAGAXXXXXXXXXXXXXXSAARGSSGAQTXXXXXXXTNVASAAQAIGGWPCVENCCVCKYIGAARQALRNTHEGEWKLEADPKGSDTTPPQVPRETVVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPLVR 789
BLAST of mRNA_C-linearis_contig11.1262.1 vs. uniprot
Match: A0A7S4MCB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCB0_9STRA) HSP 1 Score: 146 bits (368), Expect = 3.930e-31 Identity = 111/300 (37.00%), Postives = 156/300 (52.00%), Query Frame = 2
Query: 479 FMSEANLLELVSDLVLHLPACATSVHRFGQRERSSPHAARLLAPVPGDAVAPRPGSAAAVARAIRLLQAQRHAVAGARPPSPTVVAFLLHVLLPSPRAGDAAAK-------------GIADPEERRRCKALSALQGRKAQAAARLLLALCARAGEGRRRVLAEL--------------YSSLSCNSSADRGSAD--GSGGTRRTDREMWALQAWGELALGLAAPRAVHAAGNDYGNQTLAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLTRASVADSMRRMKAKD 1291
F+ + LE+V+DLVL +PACA ++HR+ R + RHA++G P T V+FLLH LLP PR+ A A+ D E R A ++ + +Q AARLL+AL ARAGEGRRRV+A+L SSL S A + +AD GSG R D E+WALQ+WGEL +G+AAPR+ + + N +L+W+VV+ + + G AL A+ R+ L+H A C AAL+RPLE+ TRA+V D++ + KD
Sbjct: 823 FLWLVDYLEIVADLVLAVPACAAAIHRYRPRYQV------------------------------------RHALSGQPAPPNTAVSFLLHELLPRPRSPVAPARRGRGADAELPLGGSAVDAETEERATAY--MKVKISQTAARLLVALVARAGEGRRRVIADLSFALGGGGFCGGVDVSSLMPQSPAAKRAADAEGSGSQRDEDHELWALQSWGELCIGIAAPRSTGISQDT--NASLSWEVVKLMLESGIAHALLAAVRRIRLHHPNASRCAAALIRPLEVFTRATVTDAVTELAEKD 1082
BLAST of mRNA_C-linearis_contig11.1262.1 vs. uniprot
Match: A0A7S2QUL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUL7_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.330e-26 Identity = 97/279 (34.77%), Postives = 148/279 (53.05%), Query Frame = 2
Query: 452 EEAGAAAAEFMSEANLLELVSDLVLHLPACATSVHRFGQRERSSPHAARLLAPVPGDAVAPRPGSAAAVARAIRLLQAQRHAVAGARPPSPTVVAFLLHVLLPSPRAGDAAAKGIADPEERRRCKALSALQGRKAQAAARLLLALCARAGEGRRRVLAELYSSLSCNSSADRGSADGSGGTRRTDREMWALQAWGELALGLAAPRAV--HAAGNDYGNQTLAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLTRASVADSMRRMK 1282
+ GA F +LL +++DLVL LP+ A ++HR+ S PV G +HA+ GA PP T V++LLH +L RA + + E ++ K + + +K+Q ARL++ALCAR GEGRRRV+ E+ C +G +G + RE+WAL +WGEL LGL +PR+ A +DY + TLA+++VR + ++G V L AL ++L+H AP A+LVR LE+ +R SV +++ +MK
Sbjct: 1040 DRGGAEPMFFFDVCDLLHILADLVLALPSTAAAIHRYKANSGS---------PVYG----------------------LQHALKGAEPPPSTAVSWLLHKMLVQKRAYEGDDFDLTVEGEVKKMKKEAKERVKKSQNTARLIIALCARPGEGRRRVIHEIC----CCFRKRQGGVEGG---EQAVRELWALTSWGELVLGLMSPRSGSGQAKESDYSSSTLAYEIVRLMGEVGLVGCLMDALGELELHHPLAPTAAASLVRCLEIFSRNSVNETLLKMK 1280
BLAST of mRNA_C-linearis_contig11.1262.1 vs. uniprot
Match: A0A7S2K3E8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3E8_9STRA) HSP 1 Score: 129 bits (323), Expect = 6.130e-26 Identity = 94/269 (34.94%), Postives = 142/269 (52.79%), Query Frame = 2
Query: 494 NLLELVSDLVLHLPACATSVHRFGQRERSSPHAARLLAPVPGDAVAPRPGSAAAVARAIRLLQAQRHAVAGARPPSPTVVAFLLHVLLPSPRAGDAAAKGIADPEERRRCKALSALQGRKAQAAARLLLALCARAGEGRRRVLAELYSSLSCNSS-ADRGSADGSG-----GTRRTDREMWALQAWGELALGLAAPRAVHAAGNDYGNQT-LAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLTRASVADSMRRM 1279
+LL++++DL+L +PACA ++HR+ + H + L HA++G P T V +LLH L+P R + E + L+ + +Q AARLL+ LCARAGEGRRRV+++L S+L +SS A G G +++REMWALQ+WGEL +GL+APR+ G + + L+W+VV+ + + G AL + R+DLN A AL+RPLE+ TRA+V D++ M
Sbjct: 290 DLLDILADLILAVPACAAAIHRYRAPSGTVAH---------------------------KRLSNLCHALSGCASPPSTAVGYLLHYLVPVSRVSPTKDARKTEDEALLAKNRHTYLKVQASQKAARLLIILCARAGEGRRRVVSDLASALGGSSSPASDGKEKGKSKALQLSLSQSEREMWALQSWGELCIGLSAPRS---GGITFDSDAALSWEVVKLMLEFGVAHALMEGIKRIDLNVPMASNAAGALLRPLEVFTRATVTDTVEEM 528
BLAST of mRNA_C-linearis_contig11.1262.1 vs. uniprot
Match: A0A7S2W403_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W403_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.030e-24 Identity = 89/215 (41.40%), Postives = 129/215 (60.00%), Query Frame = 2
Query: 692 HAVAGARPPSPTVVAFLLHVLLPSPRA-------GDAAAKGIADPE--ERRRCKALSALQGRKAQAAARLLLALCARAGEGRRRVLAELYSSLS----CNSSADRGSADGSGGTRRTDREMWALQAWGELALGLAAPRAVHAAGNDYGNQTLAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLTRASVADSMRRMKAKDDE 1297
HA+ G P V++ LH LLP PR D+ K D + ER+R KA ++ + +Q+AARLL+AL ARAGEGRRRV+++L +LS C+ + D ++ R D+EMWALQ+WGEL +GLAAPR+ N N +L+++VVR + + G AL + ++ L+H A AAL+RPLE+ TRASV D+++ M K+ E
Sbjct: 11 HALFGFPSPPKNAVSYFLHNLLPQPRLFPQSALKNDSVMKPGLDSDMVERKRKKAY--MKVKNSQSAARLLVALVARAGEGRRRVISDLALALSGGGQCHLNLDSCKSEILC-NRDDDKEMWALQSWGELCIGLAAPRSSSI--NQDNNSSLSFEVVRVMLECGMAHALMHGIKKVRLHHPLAATTAAALLRPLELFTRASVVDAVQEMVDKEFE 220
BLAST of mRNA_C-linearis_contig11.1262.1 vs. uniprot
Match: A0A7S2L5N5_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L5N5_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.760e-24 Identity = 93/277 (33.57%), Postives = 146/277 (52.71%), Query Frame = 2
Query: 479 FMSEANLLELVSDLVLHLPACATSVHRFGQRERSSPHAARLLAPVPGDAVAPRPGSAAAVARAIRLLQAQRHAVAGARPPSPTVVAFLLHVLLPSPRAGDAAAKGIADPEERRRCKALSALQGRKAQAAARLLLALCARAGEGRRRVLAELYSSLS---C---NSSADRGSADGSGGTRRTDREMWALQAWGELALGLAAPRAVHAAGNDYGNQTLAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLTRASVADSMRRMKAKD 1291
F+S + L+++SDLVL +PAC ++HR+ + H HA++ P+ V+FLLH L+P PRA K + +E + +A + Q R +Q+AARL++ L AR+GEGRRRV+A+L +LS C N S ++ + D E WALQ+WGEL L+APR + D ++ L++DVV+ + D G +L A+ R++LNH+ A ++LV+PLE+LTR +V ++ M K+
Sbjct: 435 FLSTIDYLDILSDLVLAIPACGAAIHRYKPSKNDHFH----------------------------------HALSACADPAQNTVSFLLHKLIPQPRADP---KQHINDDETSKKRAFT--QARLSQSAARLIVCLVARSGEGRRRVIADLMFALSGGRCPFENRSVAPTLSESAAKQSGEDIECWALQSWGELCTSLSAPRFNNTV-IDVDSKMLSYDVVKLMLDCGGAHSLIYAIERINLNHTMAQVAASSLVKPLEILTRGAVYKTVTEMAEKE 671
BLAST of mRNA_C-linearis_contig11.1262.1 vs. uniprot
Match: A0A6H5K1Z7_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1Z7_9PHAE) HSP 1 Score: 115 bits (289), Expect = 5.870e-22 Identity = 59/79 (74.68%), Postives = 63/79 (79.75%), Query Frame = 2
Query: 5849 GLESEDVDFPPRRLLGPASDSTAQPTFAAXXXXXXXXXXXDRRQDVHPVVARRGLDFLWYLCKTSLRVTNDMLTVGPAG 6085
GLESE+VDFPPRRLLGPASDSTAQPTFAA D Q+VHP+VARRGLDFLWYLCK S RVT D+LTVGPAG
Sbjct: 53 GLESEEVDFPPRRLLGPASDSTAQPTFAAARTGGEGDDD-DGWQEVHPLVARRGLDFLWYLCKNSFRVTYDVLTVGPAG 130
BLAST of mRNA_C-linearis_contig11.1262.1 vs. uniprot
Match: K0TGP5_THAOC (HECT domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGP5_THAOC) HSP 1 Score: 115 bits (289), Expect = 8.030e-22 Identity = 95/278 (34.17%), Postives = 144/278 (51.80%), Query Frame = 2
Query: 479 FMSEANLLELVSDLVLHLPACATSVHRFGQRERSSPHAARLLAPVPGDAVAPRPGSAAAVARAIRLLQAQRHAVAGARPPSPTVVAFLLHVLLPSPRAGDAAAKGIADPEERRRCKALSALQGRKAQAAARLLLALCARAGEGRRRVLAELYSSLSCNSS---ADRGSADGSGGTRRTDR---EMWALQAWGELALGLAAPRAVHAAGN-DYG-NQTLAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLTRASVADSMRRMKAK 1288
F+S +LL+ +SDLVL +P C+ +VH++ + +PV + ++G P T V LLH LP PR+ K D + + + LS Q + QAA+RL++ L AR+GEGRRRV+++L +LS A+ G G R EMWALQ W EL L L APR+ +A+ + D+ N L+++V+ + D GA AL AL +++L H AP+ +A++RPLE+ TRASV+ + + AK
Sbjct: 673 FLSTCDLLDTLSDLVLAIPQCSAAVHKYS-----------VKSPV-------------------------TNILSGCPEPPQTFVGCLLHDFLPLPRSTPKGEKVGTDSDPYKASRILSFQQTMECQAASRLIVCLVARSGEGRRRVISDLIFALSGGKLLPVAETGKKSQVGSATRDATLASEMWALQTWSELLLALQAPRSRNASSHQDFNSNSVLSFEVILMMLDHGAAHALMFALDKVNLQHPMAPSVSSAILRPLEIFTRASVSVKVDDLIAK 914 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1262.1 >prot_C-linearis_contig11.1262.1 ID=prot_C-linearis_contig11.1262.1|Name=mRNA_C-linearis_contig11.1262.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2044bp MVALAAPGAHGSSGGGGGGGGAQQQQERAATPTVPPPVADAKAGTPTRQRback to top mRNA from alignment at C-linearis_contig11:1938301..1950887+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1262.1 ID=mRNA_C-linearis_contig11.1262.1|Name=mRNA_C-linearis_contig11.1262.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=12587bp|location=Sequence derived from alignment at C-linearis_contig11:1938301..1950887+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:1938301..1950887+ >mRNA_C-linearis_contig11.1262.1 ID=mRNA_C-linearis_contig11.1262.1|Name=mRNA_C-linearis_contig11.1262.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=12264bp|location=Sequence derived from alignment at C-linearis_contig11:1938301..1950887+ (Chordaria linearis ClinC8C monoicous)back to top |