mRNA_C-linearis_contig11.1261.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1261.1 vs. uniprot
Match: D7G2U2_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U2_ECTSI) HSP 1 Score: 760 bits (1963), Expect = 2.090e-236 Identity = 571/989 (57.74%), Postives = 632/989 (63.90%), Query Frame = 1
Query: 4030 VVGVLDYIPREVVYAAWPGFAAPPAETEADGADAKGSSDPSSSS--------SASTAVVEELPPLLKAFCSLLRSLAATDWLSASLTMLTRWAHSRSAQTAAGQQAASRWGATLVSGSGRKVLERLMRLHRYVLMEISRAKVDHEAWLRALKAAQAGDATPGDKKAAAT------------------AATAEMPWPEPDFFRILVVAQDGALVGSGLDSDGSVAVHTVECGTVVVAYERAASSAGVIRYRTRHGWISEHTRGTGRQPIVEVLAIGLAGDGGEPSEKATETEAERXXXXXXXXXXXXXXXXQHIQQGGRRRPVNGMRVAMCNTLARLHTVVKQLVTAFARVLAGSLPRPHHRDDLAPNMNPVAPAVCDFLSENLREAFSLGLXXXXXSEGGGGTLLSPEARCAQ-------LAGLLVRMERRGLPLRLLLDACSFIFRSALDMAGGP----GSPASPTLPFKGGVEGGRGKGTGSGGAAV---------SVVAGGDQEGWEAFNRSMDDRDEEVLKAAAAXXXX---GEKAGERERELPATMVEVLKVSLSLLRRLANRNLIAAGPFASAMQMWPPGHPQRREWEAALAMAGEPAPSSEGPGATGAAVARASPSGATFRSTLAELYRAHTPDPQGESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPRPQSPVAPTPLSXXXXXXXXXXXXXXXXSRAAAGA---------------------------AEAGTGGGSSGPPAWRRSAPTGGGDGKPKAPSPPTPPRFSSDLFIRRVHLLVGDVMEPVWRDPRVALLPQDAASRLLASVLELLQSLQAECSHSSLMRHRQRALARTQDRAGGASGRXXXXXXXXXXXXRGLN---PG-----RWNLLSRGREPPPAPVAFVPEERTVTQLVEMGFTRDHVLMALRSTETNRVEVAMEYLLTHPAP 6744
++G+L+ IPRE VY AWP A E DG + +A ELPPLLKA LLR LAAT+WL+ +LT+LTRWAHSR AQTAAGQQAASRWGA LVSGSGR+VLERLMRLHR V ME SRAK +H+ WLR L+AA + K T EMPWPEPDFFRI VVAQDGALVGSGLDSDGSVAVHTVECGTVVVAYERAA+SAGV+RYRTRHGWISEH RGTGRQPIVE+L++GL G GGEPSE+ TE XXXXXXXXX QHIQQGGRRRPV+G+R CN+LARLHTV KQLVTAFARVLAGSLPRPHHR+DL PNMNPVAPAVC+FLSE+LRE F+LGL S G +P + ++ A LLVRMERRG PLR LL+ACS+IF SAL+MA GP +PASPT PFKGGV G G+G G AAV + G Q+GWEAFNRSMDDRDEEV KA XXXX GEK +ERELPA M+EVLKV+LSLLRRL+NRNL AAGPFAS MQMWP GHPQ + E DP+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SPP+PQ+P PTP++ XXXX XXSRAA A G GG W S P GG K AP PPRFSSDLFIRRVHLL G+V+EP+WRDPR+A LP +AASR+LA+VLELLQSLQAE SH S+MRHRQRALAR Q+RA XXXXXXXXXXXX PG RWN RGREP PAPV F PEERT+TQLVEMGFTR+HVL ALR+TETNRVEVAMEYLLTHPAP
Sbjct: 1 MLGLLECIPREPVYVAWPVLPA-----EEDGTXXXXXXXXXXXXXXXXXXXXGSRSAPPNELPPLLKAMSGLLRCLAATEWLAGALTLLTRWAHSRGAQTAAGQQAASRWGAILVSGSGRRVLERLMRLHRNVFMEFSRAKAEHQTWLRTLEAANQTAPPSAEGKEQTTDXXXXXXXXXXXXXXXXXXCPPEMPWPEPDFFRINVVAQDGALVGSGLDSDGSVAVHTVECGTVVVAYERAANSAGVMRYRTRHGWISEHARGTGRQPIVEILSVGLTGQGGEPSEEETEXXXXXXXXXXXXXXLE-----QHIQQGGRRRPVHGLRATGCNSLARLHTVTKQLVTAFARVLAGSLPRPHHREDLTPNMNPVAPAVCEFLSESLREGFALGLDRTEGSRAVYGPWQAPPSFTSEEHLEGNACANLLVRMERRGPPLRRLLEACSYIFSSALEMAAGPPDGSSAPASPTSPFKGGVVEGEGEGAGGVTAAVHGDNRATAAAAAVSGSQQGWEAFNRSMDDRDEEVRKAVXXXXXXXXXGEKV--KERELPAPMLEVLKVALSLLRRLSNRNLTAAGPFASTMQMWPSGHPQEEKGEI---------------------------------------------DPERNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGTM--------------------------SPPQPQAPGTPTPMAVAXXXXVEPPSTPDXXSRAAGARXXXXXXXXXXXXXXXXXXXSQSSKISRAPGGPGG------KWLTS-PQDGGKAKTNAP----PPRFSSDLFIRRVHLLAGEVLEPLWRDPRLASLPPEAASRVLATVLELLQSLQAESSHGSVMRHRQRALARNQERAAXXXXXXXXXXXXXXXXXXXXXXAPPGQLVAQRWNF--RGREPAPAPVPFAPEERTITQLVEMGFTREHVLTALRATETNRVEVAMEYLLTHPAP 893
BLAST of mRNA_C-linearis_contig11.1261.1 vs. uniprot
Match: A0A6H5LD86_9PHAE (DUF913 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD86_9PHAE) HSP 1 Score: 697 bits (1799), Expect = 6.450e-219 Identity = 578/838 (68.97%), Postives = 619/838 (73.87%), Query Frame = 1
Query: 2014 LRWVEAVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ----------------GFGGVGKPFHRRYVVSQAVQIMETAVVNNTAALSAFRELGAAEVLASAFSTEVRRLRNAGSELAAA---GAGAEDDMVVDGRADDVDSKAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------LANPSPSQKALLFSLLNALSITFQNQTQHQQVGSDPLLEAFLTAAVMDVFKNASMFGGVLVALTATLISDVANQDPSTTVAYLLRRVSGIVEEYLKVLTASPSLM----SSDFFVTVPNVLHAVCLTHDGTSKVQEANVFPAFFRMLHSPESMHPQSRYPDGSVTTVVGAGLDELMRHVPALRPQCIKALVASLEELVAKGNDLLKRELSGDASRKALNERALMQQYAANSGQLLESALSRPENAKPFTDAGGDEVLLKMFSLAVPGPRPLLARVSCAWGGGXXXXXXXXXXXXXXXXXXXXXXXAHPGLANHTASQALTMAVKALGTHDTGRLLKRLLAELSKELDRLEIARKAVVDAGGVSAAVASXXXXXXXXXDAMDVESQPPATSAKPXXXXXXXXXXXXXXXXXXXXXXXXXSTRAXXXXXXXXXXXXXXXXEEAGDNSDVDMSGGDXXXXXXXXXXXXXXXXXXXGSSSTGELDVVGVLDYIPREVVYAAWPGFAAPPAETEADGADA-------KGSSDPSSSSSASTAVVEELPPLLKAFCSLLRSLAATDWLSASLTMLTRWAHSRSAQTAAGQQAASRWGATLVSGSGRKVLERLMRLHRYVLMEI 4416
L WVE VFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ GFGG+GKPF RRYVVSQAVQIMETAVVNN AALSAFR+LGAAEVLASAFSTEV RLR+AG+ AA G MVVD D KAEGXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX LA+PSPSQKALLFSLLNALSITFQNQ VGSDPLLEAFLTAAVMDVF+N+ MFGGVLVALTATLISDVANQDPSTTV YLLR SGIV+EYLKVLTA+P+ SSD VTVPNVLHA+CLTHDG S+VQEANVFPA SRYP+G++T+VVGAGLDELMRHVPALRPQCIKALV+SL+ELV KG++LLKREL+GD+S + LNER LMQQYAAN GQLLESAL RPENAKPF DAGGDEVLL +FSLAVPGPR LLAR SCA XXXXXXXXXXXXXXXXXXX LANH ASQALT A+KALGTHDT RLLKR+L L +ELDRL+ ARKAV++AGG+SAAVASXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX G XXXXXXXXXXXX ELD++GVL+ IPRE VY AWP A ET AD KG S SSSS +A ELPPLLKA LLR L AT+WL+ +LT+LTRWAHSR AQTAAGQQAASRWGA LVSGSGR+VLERLMRLHR VL+EI
Sbjct: 9 LLWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQVGLRLCSDCVHMVKGTGFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAAAAGDNRSGGGCSGMVVD----DPKGKAEGXXXXXXXXXXXXXXXXXXXXXXXDGKVKGTTXXXXXXXXXXXXXXATGGDPDGVQGGAEDDASSAAGGPLADPSPSQKALLFSLLNALSITFQNQ-----VGSDPLLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVPYLLR--SGIVDEYLKVLTATPATPAPPPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPA--------------SRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRELAGDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCA-------GXXXXXXXXXXXXXXXXXXXXQHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARKAVMEAGGMSAAVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXSGAVEGKGPPXXXXXXXXXXXXXXXXXXELDMLGVLECIPREPVYVAWPVLPAEEDET-ADSXXXXXXXXXXKGHS--SSSSGPRSAAPTELPPLLKAMSGLLRCLTATEWLAGALTLLTRWAHSRGAQTAAGQQAASRWGAILVSGSGRRVLERLMRLHRNVLVEI 802
BLAST of mRNA_C-linearis_contig11.1261.1 vs. uniprot
Match: D7G2U3_ECTSI (DUF913 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U3_ECTSI) HSP 1 Score: 644 bits (1661), Expect = 1.970e-203 Identity = 444/559 (79.43%), Postives = 476/559 (85.15%), Query Frame = 1
Query: 2008 DQLRWVEAVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQGFGGVGKPFHRRYVVSQAVQIMETAVVNNTAALSAFRELGAAEVLASAFSTEVRRLRNAGSELAAAGAGAEDDMVVDGRADDVDSKAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LANPSPSQKALLFSLLNALSITFQNQTQ-HQQVGSDPLLEAFLTAAVMDVFKNASMFGGVLVALTATLISDVANQDPSTTVAYLLRRVSGIVEEYLKVLTASPSLM-SSDFFVTVPNVLHAVCLTHDGTSKVQEANVFPAFFRMLHSPESMHPQSRYPDGSVTTVVGAGLDELMRHVPALRPQCIKALVASLEELVAKGNDLLKRELSGDASRKALNERALMQQYAANSGQLLESALSRPENAKPFTDAGGDEVLLKMFSLAVPGPRPLLARVSCAWGGGXXXXXXXXXXXXXXXXXXXXXXXAHPGLANHTASQALTMAVKALGTHDTGRLLKRLLAELSKELDRLEIARKAVVDAGG 3669
DQLRWVE VFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQGFGG+GKPF RRYVVSQAVQIMETAVVNN AALSAFR+LGAAEVLASAFSTEV RLR+AG+ D K + XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX LA+PSPSQKALLFS+LNALSITFQNQTQ HQQVGSDPLLEAFLTAAVMDVF+N+ MFGGVLVALTATLISDVANQDPSTTVAYLLR SGIV+EYLKVLTA+P+ SSD VTVPNVLHA+CLTHDG S+VQEANVFPAFFRMLH+PESMHPQSRYP+G++T+VVGAGLDELMRHVPALRPQCIKALV+SL+ELV KG++LLKREL+GD+S + LNER LMQQYAAN GQLLESAL RPENAKPF DAGGDEVLL +FSLAVPGPR LLAR SCA XXXXXXXXXXXXXXXXXXXX LANH ASQALT A+KALGTHDT RLLKR+L L +ELDRL+ ARK +GG
Sbjct: 2 DQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQGFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAXXXXXXXXXXXXXXXXXXXVDDPKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXGKARGAPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPLADPSPSQKALLFSVLNALSITFQNQTQTHQQVGSDPLLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVAYLLR--SGIVDEYLKVLTATPAPPPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPAFFRMLHTPESMHPQSRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRELAGDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCA------GXXXXXXXXXXXXXXXXXXXXXQHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARKGGRGSGG 552
BLAST of mRNA_C-linearis_contig11.1261.1 vs. uniprot
Match: D7G2U4_ECTSI (DUF908 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U4_ECTSI) HSP 1 Score: 306 bits (784), Expect = 3.520e-90 Identity = 191/251 (76.10%), Postives = 202/251 (80.48%), Query Frame = 1
Query: 166 MRIRASSGAT-IGQPEPRPSAELEPLKRAILDAKADAELIAALRMVKGEDEWEEQPDLYDWYSVLDRMDETLETKMHGHPSLLLIQPGDQQKTPAAXXXXXXXXXXXXXXXXXXXXXDVEVAESSAEGXXXXXESGEAGELVLCCLQFLAILMRNCVNKHVFSSSEHLRTLLGAADDEVAETALRCLMLLTVPPLLHRHQQQPELHSMCSIHKDKAVSAELMTLSGGWGGRGQGLGLLACVTGIVDGEAEG 915
MRIRASSGA +GQPEPR S ELEPLKRAIL+AK DAELIAAL++VKGEDEWEEQPDLYDW VLDRMDETLET M HPSLLLIQP D Q XXXXXXXXXXXXXXXXXXXXX CCL FLA+LMR+CVNKHVFSS+EHLR+LL A DD VAE+ALRCLMLLTVPPLLHRHQQ PELHSMCSIHKDKAVSAELMTLSGGWGGRGQGLGLLACVTG V+GEA+G
Sbjct: 1 MRIRASSGAGGVGQPEPRLSRELEPLKRAILEAKTDAELIAALKLVKGEDEWEEQPDLYDWCDVLDRMDETLETNMLRHPSLLLIQPADHQXXXXXXXXXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXCCLNFLAVLMRSCVNKHVFSSAEHLRSLLAAGDDAVAESALRCLMLLTVPPLLHRHQQ-PELHSMCSIHKDKAVSAELMTLSGGWGGRGQGLGLLACVTGRVEGEAKG 234
BLAST of mRNA_C-linearis_contig11.1261.1 vs. uniprot
Match: A0A448ZD07_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD07_9STRA) HSP 1 Score: 303 bits (777), Expect = 2.170e-78 Identity = 310/1112 (27.88%), Postives = 471/1112 (42.36%), Query Frame = 1
Query: 316 WEEQPDLYDWYSVLDRMDETLETKMHGHPSLLLIQPGDQQKTPAAXXXXXXXXXXXXXXXXXXXXXDVEVAESSAEGXXXXXESGEAGELVLCCLQFLAILMRNCVNKHVFSSSEHLRTLLGAADDEVAETALRCLMLLTVPPLLHRHQQQPELHSMCS-IHKDKAVSAELMT-LSGGWGGRGQGLGLLACVTGIVDGEAEGVQGGGDNTPIKITSSTGTHKPKPPPVLPANAGDLFFEYTPAPSDPTVTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEINRALSPGGYTTSRTIFVPAAPATGAGESDNK--------------------ETTAVLF---RRLAEEHTRVPKRRLLSLLARVRGVVAWRGGLEARRAAVRRRIMALTALVYCHPSQEALMAYIGIQPELIQELVDLVRVRT----------------------DQLAQMT----VPLDISVLAVHCLAALVHTRSGGS-SLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVSSLFIMPEQDAAXXXXXXXXXXDSGVIESKASDPGDGGSTAPPRPLPPRPDAALSLGMAFVEAAGAQQQPKGAGXXXSGGSRAPPAALQLQLSQADQLRWVEAVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQGF------GGVGKPFH----RRYVVSQAVQIMETAVVNNTAALSAFRELGAAEVLASAFSTEVRRLRNAGSELAAAGAGAEDDMVVDGRADDVDSKAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANPSPSQKALLFSLLNALSITFQNQTQHQQV----GSDPLLEAFLTAAVMDVFKNASMFGGVLVALTATLISDVANQDPSTTVAYLLRRVSGIVEEYLKVLTASPSLMS-----SDFFVTVPNVLHAVCLTHDGTSKVQEANVFPAFFRMLHSPESMHPQSRYPDGSVTTVVGAGLDELMRHVPALRPQCIKALVASLEELVAKGNDLLKRELSGDASR----KALN---ERALMQQYAANSGQLLESALSRPENAKPFTDAGGDEVLLKMFSLAVPGPRPLLARVSC 3417
+EEQ DL +W L+R+D +L + +P LLLI P ++ + A V S E +S LV+ L+FL+ L+ N NK VF+S E L LL AADD +A +L L L +PP LH+ QQ PE+ S +H K S + +T L+ GWG RG GLGL AC + D + V G G LP AG+L F + E + P T + + A + ESD+ +TA LF R A R+P RL LLA +R ++ +R AA+ RR+ AL +++ +PSQE + Y QPEL ELVDL+R D + ++ VP I LA+ L AL R GG+ SL ARH+++ ELG+ +GQY GLLP L+R+ ++SL + + S IE D A+ +G+AF+EA P+ QL +A L ++++V +L A+VS G +++TECGL+PALLN V ++ + + F R++ +QAVQI+E A+V ++ ALSAF L EVL + S EV R ++ G+++D D DS + G SQ+ +LF ++ L++ F ++ V G+ + + LT A++++ N ++GG L +L +TL+SDV N DP V Y+ +G+ +LK+L PS + + +++P VL A+ LT G K++E N FP R+ H P+ P+SR +T++VG GLDE+MRHVP+L KA+ ++ ++VA G+ + +E + A+ +AL+ ER + QY N GQ+LE L E+ PF ++GG + +LKM+ +P LA +SC
Sbjct: 67 FEEQVDLQEWVEPLNRIDASLSFYIQKYPFLLLISPVERTTSKGASKLAKCI---------------VSKPARSIEEVNGVTDSVRNNILVI--LKFLSGLLTNSSNKSVFNSVEELVDLLAAADDNIASASLETLCALAMPPSLHK-QQVPEIQQHSSALHISKTTSHKRLTALARGWGTRGSGLGLYACA--VSD---DSVFGQGS--------------------LPQQAGELNFSF---------------------------FRDKAYEENRKGENEEESSLVHVNLPANSFTEDSEMMFEATLKNSDESDDSTGSKQKRRRVALPMKVDRTIRSTADLFFQCLRQAGGVERIPADRLFPLLADIRLTRSFHCQ-ASRVAAIERRLRALITILHANPSQEVMSGYFQAQPELCVELVDLLRPTVSSGAVSASSAAPKSSKIPRQNRDHIVTLSNSPIVPYQIRELALQSLTALAARREGGNGSLTGFARHSNILTELGVGKGQYLGLLPTLIRYSLASLGSLVSTPSCRDIESNETMASS--IEKSKVDA-----------------TAMDIGLAFIEATSTPTVPRFE-----------------QLEKA--LLFMDSVLTLTSAIVSTPSGTSSLTECGLVPALLNTVSIDAEVASMKIMPDSSSESEIFRIQSLLRFITAQAVQILEGAIVTHSNALSAFHNLKGVEVLTARLSKEVLGAREKSTKN-----GSDNDCTTM-EIDKADSASIGGVELRA--------------------------------------------------------------SQRVVLFGVVTCLTVVFHQESTSSSVATPSGTAEIQKPELTKALIEILDNVDLYGGHLASLISTLLSDVMNSDPHV-VKYV--HENGLARSFLKMLDVGPSGVPIPPPVPELIMSIPTVLAALALTEAGAKKLEENNPFPGLLRLFHHPKYAMPRSRCLLNEMTSIVGTGLDEIMRHVPSLSKSICKAIANAMMDVVAFGDQVALKEHNETAADTQCPQALDVDHERTCLVQYGLNFGQILEQILHNEEHCGPFLESGGLDAILKMYPYLMPTSDRFLAHISC 998
BLAST of mRNA_C-linearis_contig11.1261.1 vs. uniprot
Match: A0A7S4IYT2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IYT2_9STRA) HSP 1 Score: 273 bits (698), Expect = 9.870e-70 Identity = 361/1389 (25.99%), Postives = 532/1389 (38.30%), Query Frame = 1
Query: 1225 AAPATGAGESDNKETTAVLFRRL--AEEHTRVPKRRLLSLLARVRGVVAWRGGLEARRAAVRRRIMALTALVYCHPSQEALMAYIGIQPELIQELVDLVRVRTDQLAQMT--------------------------------------------VPLDISVLAVHCLAALVHTRSG---GSSLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVSSL--FIMPEQDAAXXXXXXXXXXDSGVIESKASDPGDGGSTAPPRPLPPRPDAALSLGMAFVEAAGAQQQPKGAGXXXSGGSRAPPAALQLQLSQADQLRWVEAVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ-----------GFGGVGKPFHRRY-------VVSQAVQIMETAVVNNTAALSAFRELGAAEVLASAFSTEVRRLRNAGSELAAAGAGAEDDMVVDGRADDVDSKAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANPSP---SQKALLFSLLNALSITFQNQTQHQQVGSDPLLEAFLTA-------------AVMDVFKNASMFGGVLVALTATLISDVANQDPSTTVAYLLRRVSGIVEEYLKVL----------TASPSLMSSDFFVTVPNVLHAVCLTHDGTSKVQEANVFPAFFRMLHSPESMHPQSRYPDGSVTTVVGAGLDELMRHVPALRPQCIKALVASLEELVAKGNDL-----LKRELSGDASR--KALNERAL----MQQYAANSGQLLESALSRPENAKPFTDAGGDEVLLKMFSLAVPGPRPLLARVSCAWGGGXXXXXXXXXXXXXXXXXXXXXXXAHPGLAN-------HTASQALTMAVKALGTHDTGRLLKRLLAELSKELDRLEIARKAVVDAGGVSAAVASXXXXXXXXXDAMDVESQPPATSAKPXXXXXXXXXXXXXXXXXXXXXXXXXSTRAXXXXXXXXXXXXXXXXEEAGDNSDVDMSGGDXXXXXXXXXXXXXXXXXXXGSSSTGELDVVGVLDYIPREVVYAAWPGFAAPPAETEADGADAKGSSDPSSSSSASTAVVEELPPLLKAFCSLLRSLAATDWLSASLTMLTRWAHSRSAQT--AAGQQAASRWGATLVSGSGRKVLERLMRLHRYVLMEISRAKVDHEAWLRALKAAQAGDATPG----DKKAAATAATAEMPWPEPDFFRILVVAQDGALVGSGLDSDGSVAVHTVECGTVVVAYERAASSAGVIRYRTRHGWISEHTRGTGRQPIVEVLAI-GLAG---------DGGEPSEKATETEAERXXXXXXXXXXXXXXXXQHIQQGGRRRPVNGMRVAMCNTLARLHTVVKQLVTAFARVL 5004
++P E + + T+ + F L A + VP+ RL LLA VR ++ + R A+ R+ AL A++ HP+Q+ + Y QPEL EL DL+R A + VP + LAV L ALV R GSS+ + + ELG+ +GQ+ GLLP LVR+ ++SL F++ XXXXXX + +A DG +SLG+AFV+AA +P XXX A + L +V+ V +L AVVSV G +A+TECGLIPAL+ V L+ + + G GG + Y V +QAVQI+E A+V + ALSAFR+LG ++L +E+ +R G + A G +M D K +G XXX +P P S++ LLFS++N L++ F Q GS+ L A + A+ D+ +N +GGVL AL+ATL+SDV N DP V Y+ SG+ + +L + TA SSD + +PNVL A+ LT DG + V+E++ FP+ + PE P+SR + ++VG GLDE+MRHVP+LRP I A+V ++ +V G +L G++S K ER L + QYA+N GQLLE L E+ PF +AGG E L ++ L VP R LLA+VS AH ++ + AS AV ++ RL+ +L L K LD + + + GG A+A A++ P + +S D S L+K+ LRS+ A +WL++ L+ L R A R+ + A ++ W L R+ ++RL LHR +ME+ R + Q G A D++ P +R+ +V +GA+V G++ +V +E G VV AY+R +S+GV+RYRT GW+SE TRG GR+PIVEVL + G+A DGGE E + ++ G + +R A + LARLH + L+T R +
Sbjct: 29 SSPRVPPSEMEIRSTSDLFFLALERAGGRSSVPRSRLFPLLAEVRLARSFHRRTD-RIVAIENRLRALVAVLQSHPNQDVVGGYFAAQPELCSELCDLLRPTVSSAAVSSGTGIGGGAAAHPDGLELRGLSGRLDSSRSAGRDGISAVSDPPPPVPYSVRTLAVEALTALVARRDPAGTGSSMYPALKQSATLAELGVGKGQFLGLLPALVRYSLASLNAFLLGRGSGEQGSSXXXXXXXTDAPMEEA----DGXXXXXXXXXXXXXALGMSLGLAFVDAA---LRPPXXXXXXXXXXXXXXXARTRAEEEERALEFVDVVLTLTSAVVSVPSGTSALTECGLIPALVGTVALDSNRRARLREESRSFTGEGGEAQWGRESYADVLLNFVTAQAVQILEGAIVTHGNALSAFRDLGGVDLLVRRLVSEIEDVRREGGDEAPLGGSQAAEMK------DERDKKDGDGXXXVAMEDADEKEEKNPAAVVAVSSAPGASGEKK----------------------------HPRPMRASRRVLLFSMVNCLTVVFHQQETAANSGSNASLTAASQSSGTAQLHRPEFADALRDIMENVGSYGGVLAALSATLLSDVMNADPQV-VRYV--HSSGLAKSFLNMFLTGGGEEDSPTAPSVPPSSDLIMAIPNVLSALSLTEDGAAAVKESDPFPSLLAVFVRPEYAMPESRCLLNEMASIVGTGLDEIMRHVPSLRPLVIDAIVGVVKRVVKLGKELDEXXXXXXXXGGESSSVSKPEEERELAMNHLAQYASNVGQLLEQLLHTEEHVGPFLEAGGLESALDLYPLLVPSGRRLLAQVSAL-------------------SCPSVSSAAHTNMSGTLNLAIKNVASGGYGHAVAGSSAGESHRLMGNILGRLEKGLDEVAGVMRELRSCGGDLPAIAGAEGEFAGAKGALNAVPSVPLQTL----------------------------------------------------DSSTDSS--------------------------------------------------------------------------------------KLVKSLSRYLRSIGAVEWLTSLLSSLVRSAVQRNHEMGGAFSSRSEREWKKELGGERFRRAVDRLGELHRASMMEVCRVRT------------QVGGAEGAIGYEDREELRRRPPGRGNPLHPAVYRLRIVCPEGAVVRDGIEISPCASVGGLEMGEVVDAYDRCVNSSGVLRYRTARGWVSEQTRGHGREPIVEVLDVRGVAAAVHPSAPYSDGGEGGE------------------------FKRVECG-----IVDLRSASASVLARLHASQRGLMTCLGRAV 1174
BLAST of mRNA_C-linearis_contig11.1261.1 vs. uniprot
Match: B7G082_PHATC (HECT-type E3 ubiquitin transferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G082_PHATC) HSP 1 Score: 264 bits (674), Expect = 2.130e-66 Identity = 290/1016 (28.54%), Postives = 433/1016 (42.62%), Query Frame = 1
Query: 598 LQFLAILMRNCVNKHVFSSSEHLRTLLGAADDEVAETALRCLMLLTVPPLLHRHQQQPELHS-MCSIHKDKAVS-AELMTLSGGWGGRGQGLGLLACVTGIVDGEAEGVQGGGDNTPIKITSSTGTHKPKPPPVLPANAGDLFFEYTPAPSDPTVTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEINRALSPGGYTTSRTIFVPAAPATGAGESDNKET--TAVLFRRLAEEH---TRVPKRRLLSLLARVRGVVAWRGGLEARRAAVRRRIMALTALVYCHPSQEALMAYIGIQPELIQELVDLVR---------------------VRTDQLAQMT----VPLDISVLAVHCLAALVHTRSGGS-SLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVSSL------FIMPEQDAAXXXXXXXXXXDSGVIESKASDPGDGGSTAPPRPLPPRPDAA-LSLGMAFVEAAGAQQQPKGAGXXXSGGSRAPPAALQLQLSQADQLRWVEAVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDG-------QGFGGVGKPFHR-----RYVVSQAVQIMETAVVNNTAALSAFRELGAAEVLASAFSTEVRRLRNAGSELAAAGAGAEDDMVVDGRADDVDSKAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANPSPSQKALLFSLLNALSITFQNQTQHQQVGSDP-----LLEAFLTAAVMDVFKNASMFGGVLVALTATLISDVANQDPSTTVAYLLRRVSGIVEEYLKVL------------TASPSLMS-SDFFVTVPNVLHAVCLTHDGTSKVQEANVFPAFFRMLHSPESMHPQSRYPDGSVTTVVGAGLDELMRHVPALRPQCIKALVASLEELVAKGNDLLKRE-------LSGDASRKALNERALMQQYAANSGQLLESALSRPENAKPFTDAGGDEVLLKMFSLAVPGPRPLLARVS 3414
L+FL L+RN +K +F+S+E L LL AADDE ++ AL L+ L++PP LH+ QQ PE+ ++H K S + L ++ GWG R GLGL + + + V G G LP AG L Y S V + + AL+ S+ + G+ KET TA L+ + E ++P RL LLA +R ++ AR AV RR+ ALT +++ HPSQE + Y QPEL E+VDL+R ++ D + ++ VP I +LAV LAALV R G + +L AR + V ELGI +G Y GLLP L+R+ ++SL I+PE IE + D DA L +GMAFVEA +P PP +Q++ + L +V+ + +L +VS G AA+T+CGLIPALL V ++D + R R+V++QAVQI+E A+V + AL+AF +L EVL+ S E+ G DM+ G+ + E SQ+ LLFS++ L++ F ++ ++P + + LT A++ V ++ S +GG + +LTATL+SDV N DP V+Y+ SGI + +L ++ T P L + + VPNVL A+ LT DG + E N FP+ R+ + P P+SR +T ++G GLDELMRHV L+P ++A+ +++++V DL KRE S R +ER+ + QY N GQLLE L + +PF ++GG L+++F ++PG L S
Sbjct: 126 LRFLEGLLRNSTSKSIFNSAEELVDLLAAADDETSDLALTALLALSLPPALHK-QQAPEVQQHTTTLHNAKMPSHSRLTAIARGWGTRAMGLGLWSVIK-----ADDSVHGQGS--------------------LPGEAGRLSVCYYSRESQNEVNEESQMVRIYLNESDIMVGGSAEISM---------DSTSDALTAESDQVSKKRRI--------GKIPRKETKSTAELYYLVLERAGGMDKIPSDRLFPLLADIRLARSFHSQ-AARIGAVERRLRALTTILHAHPSQEVMNGYFQAQPELCVEIVDLLRPTVSSANIAAASGRATETNSPLQRDAITCLSSCQPVPYTIRMLAVESLAALVARRDGSTGALSGSARLSTVLAELGIGKGYYLGLLPTLLRYSLASLDSPGHESILPE------------------IEPEDLD-----------------DATMLDVGMAFVEAT---MEPL------------PPRIVQVERT----LEFVDNLLTLTSTIVSTPTGTAALTDCGLIPALLATVAHDLDRTIQRLLPDSSNCSTQEILRVYSLLRFVLAQAVQILEGAIVTHGNALTAFHDLRGVEVLSGRLS----------GEIVTTGP----DMLSRGQQKSEREELEHTQTFVSEFDTKIRS------------------------------------------------------SQRGLLFSIITYLTVVFHQESTASTSATNPSGGAQIRQEGLTRALIHVMEHVSSYGGHVASLTATLLSDVMNSDPHV-VSYI--HESGIAKSFLSMVVGRRVKAGDSTDTYEPVLPPVPELVMAVPNVLSALSLTEDGAKVIYEINPFPSLMRIFYHPNYAMPKSRCLLNEITGIIGTGLDELMRHVERLKPLVMEAVANAMKDVVMYAEDLKKRENQFFFLSTSPLPDRGLEDERSCLMQYVLNFGQLLEQLLHNDGHCEPFVNSGGLVALMQLFPASLPGGFQFLTHAS 972
BLAST of mRNA_C-linearis_contig11.1261.1 vs. uniprot
Match: A0A7S2L793_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L793_9STRA) HSP 1 Score: 237 bits (604), Expect = 1.470e-58 Identity = 230/843 (27.28%), Postives = 362/843 (42.94%), Query Frame = 1
Query: 1333 SLLARVRGVVAWRGGLEARRAAVRRRIMALTALVYCHPSQEALMAYIGIQPELIQELVDLVRVRTDQLAQMT----------------------------VPLDISVLAVHCLAALVHTR-SGGSSLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVSSL--FIMPEQDAAXXXXXXXXXXDSGVIESKASDPGDGGSTAPPRPLPPRPDAALSLGMAFVEAAGAQQQPKGAGXXXSGGSRAPPAALQLQLSQADQLRWVEAVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQL------NMDGQGFGGVGKPFHR----RYVVSQAVQIMETAVVNNTAALSAFRELGAAEVLASAFSTEVRRLRNAGSELAAAGAGAEDDMVVDGRA-DDVDSKAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANPSPSQKALLFSLLNALSITFQNQTQHQQV------GSDPLLEAFLTAAVMDVFKNASMFGGVLVALTATLISDVANQDPSTTVAYLLRRVSGIVEEYLKVLTASPSLMSS------------------DFFVTVPNVLHAVCLTHDGTSKVQEANVFPAFFRMLHSPESMHPQSRYPDGSVTTVVGAGLDELMRHVPALRPQCIKALVASLEELVAKG-NDLLKRELSGDASRKALN---ERALMQQYAANSGQLLESALSRPENAKPFTDAGGDEVLLKMFSLAV-PGPRPLLARVSCAWGGGXXXXXXXXXXXXXXXXXXXXXXXAHPGLANHTASQA---LTMAVKALGT-HDTGRLLKRLLAELSKELDRLE 3636
+LL+ +R A+ R +A++ R+ AL ++Y S E++ AY QPEL ELVDLVR T VP D+ LA+ L ALV R S S + AR +V ELG+ +GQY GLLP L+R +++L F++ E G ++ + GDG T L LG+AF+ A ++ PP L ++ Q L +++AV +L V+SV G +A+T+CG+IPAL++ + L N + + + +++ +QA+QI+E A+V +T ALSAF EL +VL S+EV +R S AG D ++ D + D + +G +Q+ LLFS +N L++ F +Q G L + L + ++D+ N +GGV+ AL ATL+SDV N DP + V Y+ SG+ + +L ++ + + S + + VPNV+ A+CLT G V EAN FP +L SP+ P SR + ++G+GLDE+MRH P LRP+ +KA+V ++ +V G N L+ E D + A + R + QY N QLLE + PF AGG +VLL++ ++ P R L+A SC ++P +A T S++ L++ VK + + +D +LL+++ + LS +L L+
Sbjct: 136 TLLSTIRLSKAFYQNSNTRVSAIKLRLRALVTILYTLSSVESITAYFMAQPELCGELVDLVRPTVSSSGAATSSDGGVSXXXXXESESSNPILALADSPQVPYDVRALAIEALTALVARRDSPAGSFNIAARQANVLSELGVGKGQYLGLLPTLIRFSLAALNSFLLQED---------VNRGTEGQDDTNVDNNGDGDDTG------------LELGLAFIRA-----------------TKPPP--LPRKIRQERALEFIDAVLTLTSTVISVPSGTSALTDCGIIPALVSTIALDSQMTKNSNNSSSMEANEESYSNSLLKFITAQAIQILEGAIVTHTNALSAFHELKGVDVLVQRLSSEVENIRKNSS------AGDSDVVMEDVQGMKDEKPRLQG--------------------------------------------------------------------AQRVLLFSAVNCLTVVFHSQDARAGANAAAPPGGALLRKPELMSVILDIMNNVESYGGVMAALVATLLSDVMNSDPQS-VHYV--HSSGLAKSFLSLILGKENELKSVLGEDVEKWGEPIMEPSGELIMAVPNVVSALCLTEAGARVVAEANPFPTMLSVLCSPKYAMPNSRCLLSEMAAIIGSGLDEIMRHNPLLRPKIVKAVVQVMKRVVCIGKNRTLQEEGKNDTAIVADDLETARTQLMQYGNNITQLLEQLFHNEDYVSPFLSAGGFDVLLELARWSIIPTGRQLVAHASCL---------------------------SNPSIACLTHSRSANSLSLVVKTIASSNDPQKLLQKISSALSTQLTYLD 834
BLAST of mRNA_C-linearis_contig11.1261.1 vs. uniprot
Match: A0A6H5L5C5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5C5_9PHAE) HSP 1 Score: 198 bits (504), Expect = 1.400e-51 Identity = 114/174 (65.52%), Postives = 126/174 (72.41%), Query Frame = 1
Query: 5212 MERRGLPLRLLLDACSFIFRSALDMAGGP----GSPASPTLPFKGGVEGGRGKGTGSGGAAV-------SVVAGGDQEGWEAFNRSMDDRDEEVLKAAAAXXXXGEKAGERERELPATMVEVLKVSLSLLRRLANRNLIAAGPFASAMQMWPPGHPQRREWEAALAMAGEPAPS 5700
MERR PLR LL ACS+IF SAL+M GP +PASPT PFKGGV G G+ G AA+ + G Q+GWEAFNRSMD RDEEV KAAA GEK +ERELPA M+EVLKV+LSLLRRL+NRNL AAGPFAS MQMWP GHPQRR+WEAALAMAGEP PS
Sbjct: 1 MERREHPLRSLLGACSYIFNSALEMTAGPPDGSSAPASPTSPFKGGVVGEEGQNYGGVTAAICGDNRATAAAGSGGQQGWEAFNRSMDGRDEEVRKAAAGAAAGGEKV--KERELPAPMLEVLKVALSLLRRLSNRNLTAAGPFASTMQMWPSGHPQRRDWEAALAMAGEPPPS 172
BLAST of mRNA_C-linearis_contig11.1261.1 vs. uniprot
Match: A0A6H5L6M1_9PHAE (UBA domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M1_9PHAE) HSP 1 Score: 191 bits (484), Expect = 2.480e-44 Identity = 474/1143 (41.47%), Postives = 524/1143 (45.84%), Query Frame = 1
Query: 7228 PSVADTRLSQVLQSALAYIDAAFIRDAREGTEGEG------------------GAVAVAGDGEQAAAXXXXXXXXXVADATDQDVVMEDVELMQRMEALLAPSHDVSTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVSERDSRHGAAATAPEAAGSSSPRAVRRSTADRLRRAIQSRIDRDAAQAARDMSSASXXXXXXXXXXXXXXXXXXXXXXRAVEASAKXQXXXXXXXXXXXXXXXXXDAELKKICASLKALIARFQKSVEDTCFRLVIEADS-----RGASAGVGAAQEHGXXXXXXXXXXXXXXXXXXXXXXGMGFLVANFLSEHARTARNQRMSALRSDATAMIDTAMNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP------------------------------------------GASLTSKTATGAVSPXXXXXPDIVLSCIRRAGALLLPDRAAGAGAGAGVARPGLGGILHVLLLLATCASETQREGLVSGGFHLKLLELFKSTMAALRSPRKS---GGSGGAGPQPSSS----TAEWPDYMTPCLLLLDLVAKPSSVPQ---LLPQLSGLDPQQXXXXXXXXXSSADLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-------------------------------------------------------------RTTETMSSGSTSPTERGPPSLAESKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPPALADSKTT--------------PPEGTAGTGTGTPTAP-------------------------------------PTLHVLLSQDHMAELLETFVEFFAGVAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAEAGAALPAPSPNLVFAALQLLARLVRDYGRAGRFVRAGGASSLLALPGASAFEGSTALVAVVFRHLLEDPATLQSAMETEIRAAFSRLSRASTSPSTAGGRXXXXXXXXXXXXXXXXXXXX---GGNSPTTVRLLPLMSALRPLLVRDSAVMVRAAANVLRSV 10086
P +D RL QVL+SAL +ID AF A GE A GDG +A A A D+DVVMEDVELMQRMEALL P XXXXXXXXXXXXXXXXXXXXXXXXXXXXX R A+RRSTAD LRR I+ I+R AA A ++ A+E + Q DAELK++C +LKALI RFQ + + R AGVGA+ GMGFLVANFLSE+ART R QR++ LRSD M+ A N AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXP X P +VLSCIRRA A+L + AG A RPGL GILHVLLLLAT A+E QR LV+ GFH+KLLELFK+TMA LR R++ G SG G TA+WP+YMTPCLLLLDLVAKPSS Q L PQ++ L QQXXXXXXXXX P XXXXXXXXXXXXXXXXXXXXXX X XXX RT +T++S STSPTE GPP+LAESK+G XXXXXXXXXX P LA+SK + P EG T+P PTLHVLLS + MAEL+E F+EFFAGVAVP XXXXXXXXXXXXXXX GAALPAPSPNLVFAALQ SAMETEIRA F RLSRAS+S XXXXXXXXXXXXXXXXXXXX G+ P V LL LM +LRPLLVRDS +MVRAAANVLRSV
Sbjct: 229 PHHSDPRLPQVLESALTHIDTAFGSAADAADRGEQQXXXXXXXXXXXSELTRVAGPAADGDGAEA------------APAVDEDVVMEDVELMQRMEALLTPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-----------------AMRRSTADNLRRTIERLIERRAAFAP-----SAALNRLAARADTAKAQALVAKEKAAMERGQQEQE----------------DAELKRVCTALKALIGRFQGAAAGXXXXXASAQEQARSHRRERPAGVGASPAS-----------------------GMGFLVANFLSEYARTNRTQRLTDLRSD---MLLHA-NVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARGTDRTGEXXXXXXXXXXXXXXXPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSEPPSLVLSCIRRAEAMLPSE----AGVSAAAVRPGLAGILHVLLLLATGATEAQRRALVTTGFHVKLLELFKTTMAELRRARRADMKGESGDCGXXXXXXXXXXTADWPEYMTPCLLLLDLVAKPSSTSQATDLGPQVAELQRQQXXXXXXXXXXXXXXXPAARQRLQRADVEAEGVETMQALRVRQMXXXXXXXXXXXXXXXXXXXXXXSLXQXXXXXXXXPXXXXXAPAAGGAATGAAPSSTESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTIDTVASSSTSPTEGGPPALAESKDGEEPEGXXXXXXXXXXGGRQPADGRARLDEDDQKA--VPRHLAESKESGGGLRRRLRPQADKPSEGEKEESKERSTSPSRKDEETAGPPTLAESKTSSADAXXXXXXXXXXXXXXPTLHVLLSPELMAELMEAFIEFFAGVAVPPLPGDATAAAXXXXXXXXXXXXXXX------------------GAALPAPSPNLVFAALQ-------------------------------------------------------SAMETEIRATFGRLSRASSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDRPPAVSLLQLMGSLRPLLVRDSGLMVRAAANVLRSV 1215 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1261.1 >prot_C-linearis_contig11.1261.1 ID=prot_C-linearis_contig11.1261.1|Name=mRNA_C-linearis_contig11.1261.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=3319bp MRIRASSGATIGQPEPRPSAELEPLKRAILDAKADAELIAALRMVKGEDEback to top mRNA from alignment at C-linearis_contig11:1907846..1938256+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1261.1 ID=mRNA_C-linearis_contig11.1261.1|Name=mRNA_C-linearis_contig11.1261.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=30411bp|location=Sequence derived from alignment at C-linearis_contig11:1907846..1938256+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:1907846..1938256+ >mRNA_C-linearis_contig11.1261.1 ID=mRNA_C-linearis_contig11.1261.1|Name=mRNA_C-linearis_contig11.1261.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=19914bp|location=Sequence derived from alignment at C-linearis_contig11:1907846..1938256+ (Chordaria linearis ClinC8C monoicous)back to top |