mRNA_C-linearis_contig11.1231.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A6H5JCG3_9PHAE (Ribosomal_L18_c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCG3_9PHAE) HSP 1 Score: 523 bits (1348), Expect = 8.610e-186 Identity = 273/331 (82.48%), Postives = 286/331 (86.40%), Query Frame = 1
Query: 4 AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGN-------VISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEE 975
AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNK+VLAQ+IYATIQGD+CMCQASS EL RYGCKVGLKNYAAAYCTGLLV RRLLRQLGLDEAD+EKKMENLYTGQGVGVEEDGDD VDGN V+ +ESNGRTYYVDEVDEEKRPFKALLDVGIRSTST NRVFGCM+GAADGGLDVP NEKRFP YDRDTK YD EDEAKYKEHFASYIENE+TF+D+E+MYKETHKAIREDPSPAPK AFTPDKSFKN VKLTY QRKERVAAKK+EIRAAR AE+
Sbjct: 8 AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADDEKKMENLYTGQGVGVEEDGDDXXXXVDGNDGTDGLRVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKQYDVS--------------------EDEAKYKEHFASYIENELTFEDIEDMYKETHKAIREDPSPAPKTAFTPDKSFKNAVKLTYAQRKERVAAKKEEIRAARAAED 318
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A1Z5J7J4_FISSO (Large subunit ribosomal protein L5e n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7J4_FISSO) HSP 1 Score: 396 bits (1018), Expect = 8.470e-136 Identity = 199/325 (61.23%), Postives = 247/325 (76.00%), Query Frame = 1
Query: 1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEE 975
M FV+ KTKAYF RYQVKFRRRREGKTDYR RKRL+CQDKNKY SPKYRLVVRFTN+ V+ Q++Y+ I GD + QA+SKEL+RYG VGLKNYAAAYCTGLLV RR+L++LGLD+ E G EVDG ++ST+ + + YYVDEVD++K+PF+ LDVG R+TST R+FG ++GAADGGLD+P +EKRFP YDRDTK YDA++HR+RI+G HV+EYMEYL EED AKY+ HF S++EN+I D +EE+Y+ H+ IREDPSP+ K FTPDKS+K KLT+D+RK RV AKKD +A A+E
Sbjct: 1 MPFVQATKTKAYFSRYQVKFRRRREGKTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNQQVICQIVYSLIDGDRVLAQATSKELARYGLSVGLKNYAAAYCTGLLVARRVLQKLGLDDVYE---------------------GNTEVDGQIVSTDYDNKKYYVDEVDDDKKPFRCFLDVGCRTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDTKEYDADMHRERIFGGHVSEYMEYLEEEDNAKYQSHFKSFLENDIAGDGLEELYEGVHEKIREDPSPSEKKEFTPDKSYKRKSKLTHDERKARVQAKKDAKKAELAADE 304
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A7S2S5W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5W4_9STRA) HSP 1 Score: 396 bits (1017), Expect = 1.250e-135 Identity = 205/319 (64.26%), Postives = 241/319 (75.55%), Query Frame = 1
Query: 1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRA 957
M F +VQK K+YF R+QVK+RRRREGKTDYR RK+L Q KNKY SPKYRLVVRFTN+ V+ Q+ YA I GD +CQASS ELSRYG VGLKNYAAAYCTGLLV RRLL+++GLDE E G EVDG V+STE N +TYYVDEVDE++RPF+ALLDVG R+T+T R+FG ++GAADGGLDVP +EKRFP YDRD K YDAE+HR+RI+G HV EYMEYL EED KYK+ FASYIE EI D +EE+Y+ H+A+REDPS + K AFTPDKSFK KL+YD+RK RV AKKD +A
Sbjct: 1 MVFCRVQKNKSYFSRFQVKYRRRREGKTDYRQRKKLCTQAKNKYQSPKYRLVVRFTNRLVICQIAYAMIDGDRVLCQASSAELSRYGLSVGLKNYAAAYCTGLLVARRLLQKVGLDEVYE---------------------GNTEVDGEVVSTEVNKKTYYVDEVDEDRRPFRALLDVGCRATTTGCRIFGALKGAADGGLDVPHSEKRFPGYDRDGKEYDAEMHRERIFGGHVGEYMEYLEEEDNTKYKQQFASYIEEEIDADGLEELYEGVHEAVREDPSASEKVAFTPDKSFKRPSKLSYDERKARVQAKKDAKKA 298
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A836CBG0_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG0_9STRA) HSP 1 Score: 395 bits (1014), Expect = 5.410e-135 Identity = 203/311 (65.27%), Postives = 241/311 (77.49%), Query Frame = 1
Query: 1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVA 933
M FVKV K KAYFKRYQVK+RRRREGKTDYRARKRLICQDKNKYN+PKYRLVVRF+N+YV Q+ YAT++GD +CQA+S+EL RYG K GLKNYAAAYCTGLL RRLL+QLGL E LY GQ +E +G V+ TE +TY+V+EVDE+KRPF+ALLDVGI +TST RVFG M+GAADGGLD+P +EKRFP YDRD+K +DAE+H D IYGAHV+EYMEYL EEDEA YKEHFA+YIE + +++E+ E HKAIREDPS APKA F P+K +K K TY++RK +VA
Sbjct: 1 MPFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLICQDKNKYNAPKYRLVVRFSNRYVNCQIAYATVEGDKILCQANSRELERYGLKTGLKNYAAAYCTGLLCARRLLKQLGLAE---------LYEGQ------------EEAEGTVVKTEMGKKTYFVEEVDEDKRPFRALLDVGIVATSTGARVFGAMKGAADGGLDIPHSEKRFPGYDRDSKEFDAEVHHDHIYGAHVSEYMEYLMEEDEALYKEHFATYIELGLGPENMEDTLTEVHKAIREDPSAAPKADFKPNKKYKRAAKATYEERKAKVA 290
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: B7FPQ0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPQ0_PHATC) HSP 1 Score: 389 bits (1000), Expect = 4.610e-133 Identity = 196/325 (60.31%), Postives = 242/325 (74.46%), Query Frame = 1
Query: 1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEE 975
M FVK K KAYF RYQVKFRRRREG+TDYR RKRL+CQDKNKY SPKYRLVVRFTN V+ Q++Y+ + GD +CQA+SKEL+RYG VGLKNYAAAYCTGLL RRLL+++GLD+ E G EVD ++STE + + Y+VDEVDE+KRPF+ LLDVG + T+T +RVFG ++GAADGGLD+P +EKRFP +DRD+K YDA++HR+RI+G HV EYMEYL EED KY+EHFAS+I E+ D +EE+Y+ H+ IREDPSP+PK F+PDKSFK KLT D+RK RV AKKD A A++
Sbjct: 1 MPFVKNTKNKAYFSRYQVKFRRRREGRTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNTQVICQIVYSLVDGDRILCQANSKELARYGLSVGLKNYAAAYCTGLLAARRLLQKVGLDDVYE---------------------GNSEVDATIVSTEYDKKKYFVDEVDEDKRPFRCLLDVGCKPTTTGHRVFGALKGAADGGLDIPHSEKRFPGFDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNQKYQEHFASFIAAEVEADGLEELYESVHEKIREDPSPSPKKDFSPDKSFKRKAKLTLDERKARVQAKKDAKNAELAADD 304
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A448Z3Q5_9STRA (Ribosomal_L18_c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3Q5_9STRA) HSP 1 Score: 389 bits (1000), Expect = 4.770e-133 Identity = 201/324 (62.04%), Postives = 245/324 (75.62%), Query Frame = 1
Query: 1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAE 972
M F++ +TKAYF RYQVKFRRRREGKTDYRARKRL QDKNKY SPKYRLVVRFTN V+ Q+ YA + GD +CQA S EL RYG VGLKNYAAAYCTGLL RRLL+++GLDE +Y +G EVDG V+STE + +TY+V+EVD++KRPF+ALLDVG + T+T +R+FG ++GAADGGLDVP +EKRFP YDRD K YD+++HR+RI+G HV+EYMEYL EED KYKEHFA YIE ++ D +EE+Y+ H+AIREDPSP+ K F+PDKSFK KLTYD+RK VAAKK AA++AE
Sbjct: 1 MTFIQEGRTKAYFSRYQVKFRRRREGKTDYRARKRLCAQDKNKYQSPKYRLVVRFTNTKVICQIAYALVDGDRILCQAQSTELGRYGLTVGLKNYAAAYCTGLLCARRLLQKVGLDE---------IY------------EGNTEVDGEVVSTEYDKKTYFVEEVDDDKRPFRALLDVGCKPTTTGHRLFGALKGAADGGLDVPHSEKRFPGYDRDAKEYDSDMHRERIFGGHVSEYMEYLEEEDNQKYKEHFAKYIEADVEGDSLEELYESVHEAIREDPSPSEKKDFSPDKSFKRPAKLTYDERKAAVAAKK----AAKVAE 299
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A7S0BVS7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVS7_9STRA) HSP 1 Score: 385 bits (989), Expect = 4.970e-131 Identity = 199/316 (62.97%), Postives = 239/316 (75.63%), Query Frame = 1
Query: 1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTE-SNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKD 945
M FVKVQK+KAYF R+QVKFRRRREGKTDYR RKRL CQDKNKY SPKYRLVVRFTN+ V+ Q+ YA I GD +CQASS EL RYG VGLKNYAAAYCTGLL RRLL+++GLD GV E G E+D V+ TE S+G+TY+V+EVD++KRPF+ALLDVG ++T+T R+FG ++GAADGGLD+P +EKRFP YDRD K YDAE+H++RI+G HV EYMEYL EED KY+EHF YI+ +I D +EE+Y+ H+ IREDPS A K A++PDK+FK KLT QRKERV AKKD
Sbjct: 19 MVFVKVQKSKAYFSRFQVKFRRRREGKTDYRQRKRLCCQDKNKYQSPKYRLVVRFTNRQVICQIAYALIDGDRILCQASSTELGRYGLSVGLKNYAAAYCTGLLCARRLLQKVGLD-----------------GVYE----GNTEIDAEVVKTEHSDGKTYFVEEVDDDKRPFRALLDVGCKATTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDAKEYDAEMHKERIFGGHVGEYMEYLEEEDNTKYQEHFKGYIDEDIEADGLEELYEGVHEKIREDPSAAEKKAYSPDKTFKRKAKLTLAQRKERVQAKKD 313
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: B5YLN7_THAPS (RL5, ribosomal protein 5, 60S large ribosomal subunit n=2 Tax=Ochrophyta TaxID=2696291 RepID=B5YLN7_THAPS) HSP 1 Score: 382 bits (982), Expect = 2.590e-130 Identity = 195/325 (60.00%), Postives = 238/325 (73.23%), Query Frame = 1
Query: 1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEE 975
M FVKV K+KAY+KRYQVKFRRRREG+TDYR RKRL CQ KNKY SPKYR VVRF+NK V+ Q+ Y I GD + ASS EL RYG KVGLKNYAA+YCTGLL RRLL+++GLD+ E G DE+DGNV+ T+ TYYVDEVDE+KRPF+ALLDVG ++T+T R+FG ++GAADGGLD+P +EKRFP YDRD+K YDA++HR+RI+G HV EYMEYL EED KY+ FA Y+ENE+ D +EE+Y+ H+ IREDPSP+ K AF+PDKSFK KLT ++RK V +KKD A AE+
Sbjct: 1 MTFVKVTKSKAYYKRYQVKFRRRREGRTDYRQRKRLCCQAKNKYQSPKYRFVVRFSNKQVICQIAYTLIDGDRILTSASSNELPRYGLKVGLKNYAASYCTGLLCARRLLQKVGLDDVYE---------------------GNDEIDGNVVKTQVGKSTYYVDEVDEDKRPFRALLDVGCKTTTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNTKYQAQFAGYLENEVEADGLEELYESVHEKIREDPSPSEKKAFSPDKSFKRKAKLTLEERKAAVQSKKDTKNAELEAED 304
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A1E7FFB1_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFB1_9STRA) HSP 1 Score: 379 bits (974), Expect = 4.400e-129 Identity = 198/325 (60.92%), Postives = 235/325 (72.31%), Query Frame = 1
Query: 1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEE 975
M F++ K+KAYF R+QVKFRRRREGKTDYR RKRL QDKNKY SPKYR VVRFTN V+ Q+ YA + GD +CQA S EL RYG VGLKNY A+YCTGLL RRLL+++GLDE LY +G EVDG V+STE +TYYVDEVDE+KRPF+ALLDVG T+T +RVFG ++G ADGGLD+P +EKRFP YDRD K YDA+ HR+RI+G HV+EYMEYL EED KYKEHFA +IE + D +EE+Y+ H+ IR DPSP+ K AF+PDKSFK T KLTYD+RK V KKD + A L EE
Sbjct: 1 MTFIQEGKSKAYFSRFQVKFRRRREGKTDYRQRKRLCAQDKNKYQSPKYRFVVRFTNTKVICQIAYALVDGDRILCQAQSTELGRYGLTVGLKNYGASYCTGLLCARRLLQKVGLDE---------LY------------EGNTEVDGEVVSTEHGKKTYYVDEVDEDKRPFRALLDVGCNPTTTGHRVFGALKGGADGGLDIPHSEKRFPGYDRDAKEYDADTHRERIFGGHVSEYMEYLEEEDNQKYKEHFAKFIEAGVEGDGLEELYESVHEKIRADPSPSEKKAFSPDKSFKRTAKLTYDERKAAVQLKKD-AKNAELEEE 303
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A7S1YV59_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YV59_TRICV) HSP 1 Score: 379 bits (973), Expect = 6.030e-129 Identity = 194/319 (60.82%), Postives = 237/319 (74.29%), Query Frame = 1
Query: 1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRA 957
M FVKVQ +KAY RYQVK+RRRREG TDYR R+RL QDKNKY SPKYRLVVRFTN+ V+ Q+ Y+ I GD +CQA+S EL RYG +VGLKNYAAAYCTGLLV RRLL+++GLDE E G EVDG ++STE +G+ YYVDEVDE+KRPF+ LLDVG R T+T R+FG ++GAADGGLD+P EKRFP YDRD+K YDA++H++RI+G HV EYMEYL EED KY+E FA YIEN++ D +EE+Y+ H+AIREDPSP+ K F+PD S+K KLT ++RK RV AKKD +A
Sbjct: 1 MGFVKVQHSKAYSSRYQVKYRRRREGCTDYRQRRRLCTQDKNKYQSPKYRLVVRFTNRKVICQIAYSLIDGDRILCQANSDELPRYGLEVGLKNYAAAYCTGLLVARRLLQKVGLDETYE---------------------GNTEVDGEIVSTEVDGKKYYVDEVDEDKRPFRCLLDVGCRPTTTGCRIFGALKGAADGGLDIPHTEKRFPGYDRDSKEYDADMHKERIFGGHVGEYMEYLEEEDNQKYQECFAKYIENDVEADGLEELYEGVHEAIREDPSPSEKKDFSPDNSYKRKAKLTLEERKARVQAKKDAKKA 298 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1231.1 >prot_C-linearis_contig11.1231.1 ID=prot_C-linearis_contig11.1231.1|Name=mRNA_C-linearis_contig11.1231.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=326bp MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRback to top mRNA from alignment at C-linearis_contig11:1346739..1347716- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1231.1 ID=mRNA_C-linearis_contig11.1231.1|Name=mRNA_C-linearis_contig11.1231.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=978bp|location=Sequence derived from alignment at C-linearis_contig11:1346739..1347716- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:1346739..1347716- >mRNA_C-linearis_contig11.1231.1 ID=mRNA_C-linearis_contig11.1231.1|Name=mRNA_C-linearis_contig11.1231.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at C-linearis_contig11:1346739..1347716- (Chordaria linearis ClinC8C monoicous)back to top |