mRNA_C-linearis_contig11.1231.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1231.1
Unique NamemRNA_C-linearis_contig11.1231.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A6H5JCG3_9PHAE (Ribosomal_L18_c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCG3_9PHAE)

HSP 1 Score: 523 bits (1348), Expect = 8.610e-186
Identity = 273/331 (82.48%), Postives = 286/331 (86.40%), Query Frame = 1
Query:    4 AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGN-------VISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEE 975
            AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNK+VLAQ+IYATIQGD+CMCQASS EL RYGCKVGLKNYAAAYCTGLLV RRLLRQLGLDEAD+EKKMENLYTGQGVGVEEDGDD    VDGN       V+ +ESNGRTYYVDEVDEEKRPFKALLDVGIRSTST NRVFGCM+GAADGGLDVP NEKRFP YDRDTK YD                      EDEAKYKEHFASYIENE+TF+D+E+MYKETHKAIREDPSPAPK AFTPDKSFKN VKLTY QRKERVAAKK+EIRAAR AE+
Sbjct:    8 AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADDEKKMENLYTGQGVGVEEDGDDXXXXVDGNDGTDGLRVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKQYDVS--------------------EDEAKYKEHFASYIENELTFEDIEDMYKETHKAIREDPSPAPKTAFTPDKSFKNAVKLTYAQRKERVAAKKEEIRAARAAED 318          
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A1Z5J7J4_FISSO (Large subunit ribosomal protein L5e n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7J4_FISSO)

HSP 1 Score: 396 bits (1018), Expect = 8.470e-136
Identity = 199/325 (61.23%), Postives = 247/325 (76.00%), Query Frame = 1
Query:    1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEE 975
            M FV+  KTKAYF RYQVKFRRRREGKTDYR RKRL+CQDKNKY SPKYRLVVRFTN+ V+ Q++Y+ I GD  + QA+SKEL+RYG  VGLKNYAAAYCTGLLV RR+L++LGLD+  E                     G  EVDG ++ST+ + + YYVDEVD++K+PF+  LDVG R+TST  R+FG ++GAADGGLD+P +EKRFP YDRDTK YDA++HR+RI+G HV+EYMEYL EED AKY+ HF S++EN+I  D +EE+Y+  H+ IREDPSP+ K  FTPDKS+K   KLT+D+RK RV AKKD  +A   A+E
Sbjct:    1 MPFVQATKTKAYFSRYQVKFRRRREGKTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNQQVICQIVYSLIDGDRVLAQATSKELARYGLSVGLKNYAAAYCTGLLVARRVLQKLGLDDVYE---------------------GNTEVDGQIVSTDYDNKKYYVDEVDDDKKPFRCFLDVGCRTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDTKEYDADMHRERIFGGHVSEYMEYLEEEDNAKYQSHFKSFLENDIAGDGLEELYEGVHEKIREDPSPSEKKEFTPDKSYKRKSKLTHDERKARVQAKKDAKKAELAADE 304          
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A7S2S5W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5W4_9STRA)

HSP 1 Score: 396 bits (1017), Expect = 1.250e-135
Identity = 205/319 (64.26%), Postives = 241/319 (75.55%), Query Frame = 1
Query:    1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRA 957
            M F +VQK K+YF R+QVK+RRRREGKTDYR RK+L  Q KNKY SPKYRLVVRFTN+ V+ Q+ YA I GD  +CQASS ELSRYG  VGLKNYAAAYCTGLLV RRLL+++GLDE  E                     G  EVDG V+STE N +TYYVDEVDE++RPF+ALLDVG R+T+T  R+FG ++GAADGGLDVP +EKRFP YDRD K YDAE+HR+RI+G HV EYMEYL EED  KYK+ FASYIE EI  D +EE+Y+  H+A+REDPS + K AFTPDKSFK   KL+YD+RK RV AKKD  +A
Sbjct:    1 MVFCRVQKNKSYFSRFQVKYRRRREGKTDYRQRKKLCTQAKNKYQSPKYRLVVRFTNRLVICQIAYAMIDGDRVLCQASSAELSRYGLSVGLKNYAAAYCTGLLVARRLLQKVGLDEVYE---------------------GNTEVDGEVVSTEVNKKTYYVDEVDEDRRPFRALLDVGCRATTTGCRIFGALKGAADGGLDVPHSEKRFPGYDRDGKEYDAEMHRERIFGGHVGEYMEYLEEEDNTKYKQQFASYIEEEIDADGLEELYEGVHEAVREDPSASEKVAFTPDKSFKRPSKLSYDERKARVQAKKDAKKA 298          
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A836CBG0_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG0_9STRA)

HSP 1 Score: 395 bits (1014), Expect = 5.410e-135
Identity = 203/311 (65.27%), Postives = 241/311 (77.49%), Query Frame = 1
Query:    1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVA 933
            M FVKV K KAYFKRYQVK+RRRREGKTDYRARKRLICQDKNKYN+PKYRLVVRF+N+YV  Q+ YAT++GD  +CQA+S+EL RYG K GLKNYAAAYCTGLL  RRLL+QLGL E         LY GQ            +E +G V+ TE   +TY+V+EVDE+KRPF+ALLDVGI +TST  RVFG M+GAADGGLD+P +EKRFP YDRD+K +DAE+H D IYGAHV+EYMEYL EEDEA YKEHFA+YIE  +  +++E+   E HKAIREDPS APKA F P+K +K   K TY++RK +VA
Sbjct:    1 MPFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLICQDKNKYNAPKYRLVVRFSNRYVNCQIAYATVEGDKILCQANSRELERYGLKTGLKNYAAAYCTGLLCARRLLKQLGLAE---------LYEGQ------------EEAEGTVVKTEMGKKTYFVEEVDEDKRPFRALLDVGIVATSTGARVFGAMKGAADGGLDIPHSEKRFPGYDRDSKEFDAEVHHDHIYGAHVSEYMEYLMEEDEALYKEHFATYIELGLGPENMEDTLTEVHKAIREDPSAAPKADFKPNKKYKRAAKATYEERKAKVA 290          
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: B7FPQ0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPQ0_PHATC)

HSP 1 Score: 389 bits (1000), Expect = 4.610e-133
Identity = 196/325 (60.31%), Postives = 242/325 (74.46%), Query Frame = 1
Query:    1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEE 975
            M FVK  K KAYF RYQVKFRRRREG+TDYR RKRL+CQDKNKY SPKYRLVVRFTN  V+ Q++Y+ + GD  +CQA+SKEL+RYG  VGLKNYAAAYCTGLL  RRLL+++GLD+  E                     G  EVD  ++STE + + Y+VDEVDE+KRPF+ LLDVG + T+T +RVFG ++GAADGGLD+P +EKRFP +DRD+K YDA++HR+RI+G HV EYMEYL EED  KY+EHFAS+I  E+  D +EE+Y+  H+ IREDPSP+PK  F+PDKSFK   KLT D+RK RV AKKD   A   A++
Sbjct:    1 MPFVKNTKNKAYFSRYQVKFRRRREGRTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNTQVICQIVYSLVDGDRILCQANSKELARYGLSVGLKNYAAAYCTGLLAARRLLQKVGLDDVYE---------------------GNSEVDATIVSTEYDKKKYFVDEVDEDKRPFRCLLDVGCKPTTTGHRVFGALKGAADGGLDIPHSEKRFPGFDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNQKYQEHFASFIAAEVEADGLEELYESVHEKIREDPSPSPKKDFSPDKSFKRKAKLTLDERKARVQAKKDAKNAELAADD 304          
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A448Z3Q5_9STRA (Ribosomal_L18_c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3Q5_9STRA)

HSP 1 Score: 389 bits (1000), Expect = 4.770e-133
Identity = 201/324 (62.04%), Postives = 245/324 (75.62%), Query Frame = 1
Query:    1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAE 972
            M F++  +TKAYF RYQVKFRRRREGKTDYRARKRL  QDKNKY SPKYRLVVRFTN  V+ Q+ YA + GD  +CQA S EL RYG  VGLKNYAAAYCTGLL  RRLL+++GLDE         +Y            +G  EVDG V+STE + +TY+V+EVD++KRPF+ALLDVG + T+T +R+FG ++GAADGGLDVP +EKRFP YDRD K YD+++HR+RI+G HV+EYMEYL EED  KYKEHFA YIE ++  D +EE+Y+  H+AIREDPSP+ K  F+PDKSFK   KLTYD+RK  VAAKK    AA++AE
Sbjct:    1 MTFIQEGRTKAYFSRYQVKFRRRREGKTDYRARKRLCAQDKNKYQSPKYRLVVRFTNTKVICQIAYALVDGDRILCQAQSTELGRYGLTVGLKNYAAAYCTGLLCARRLLQKVGLDE---------IY------------EGNTEVDGEVVSTEYDKKTYFVEEVDDDKRPFRALLDVGCKPTTTGHRLFGALKGAADGGLDVPHSEKRFPGYDRDAKEYDSDMHRERIFGGHVSEYMEYLEEEDNQKYKEHFAKYIEADVEGDSLEELYESVHEAIREDPSPSEKKDFSPDKSFKRPAKLTYDERKAAVAAKK----AAKVAE 299          
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A7S0BVS7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVS7_9STRA)

HSP 1 Score: 385 bits (989), Expect = 4.970e-131
Identity = 199/316 (62.97%), Postives = 239/316 (75.63%), Query Frame = 1
Query:    1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTE-SNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKD 945
            M FVKVQK+KAYF R+QVKFRRRREGKTDYR RKRL CQDKNKY SPKYRLVVRFTN+ V+ Q+ YA I GD  +CQASS EL RYG  VGLKNYAAAYCTGLL  RRLL+++GLD                 GV E    G  E+D  V+ TE S+G+TY+V+EVD++KRPF+ALLDVG ++T+T  R+FG ++GAADGGLD+P +EKRFP YDRD K YDAE+H++RI+G HV EYMEYL EED  KY+EHF  YI+ +I  D +EE+Y+  H+ IREDPS A K A++PDK+FK   KLT  QRKERV AKKD
Sbjct:   19 MVFVKVQKSKAYFSRFQVKFRRRREGKTDYRQRKRLCCQDKNKYQSPKYRLVVRFTNRQVICQIAYALIDGDRILCQASSTELGRYGLSVGLKNYAAAYCTGLLCARRLLQKVGLD-----------------GVYE----GNTEIDAEVVKTEHSDGKTYFVEEVDDDKRPFRALLDVGCKATTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDAKEYDAEMHKERIFGGHVGEYMEYLEEEDNTKYQEHFKGYIDEDIEADGLEELYEGVHEKIREDPSAAEKKAYSPDKTFKRKAKLTLAQRKERVQAKKD 313          
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: B5YLN7_THAPS (RL5, ribosomal protein 5, 60S large ribosomal subunit n=2 Tax=Ochrophyta TaxID=2696291 RepID=B5YLN7_THAPS)

HSP 1 Score: 382 bits (982), Expect = 2.590e-130
Identity = 195/325 (60.00%), Postives = 238/325 (73.23%), Query Frame = 1
Query:    1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEE 975
            M FVKV K+KAY+KRYQVKFRRRREG+TDYR RKRL CQ KNKY SPKYR VVRF+NK V+ Q+ Y  I GD  +  ASS EL RYG KVGLKNYAA+YCTGLL  RRLL+++GLD+  E                     G DE+DGNV+ T+    TYYVDEVDE+KRPF+ALLDVG ++T+T  R+FG ++GAADGGLD+P +EKRFP YDRD+K YDA++HR+RI+G HV EYMEYL EED  KY+  FA Y+ENE+  D +EE+Y+  H+ IREDPSP+ K AF+PDKSFK   KLT ++RK  V +KKD   A   AE+
Sbjct:    1 MTFVKVTKSKAYYKRYQVKFRRRREGRTDYRQRKRLCCQAKNKYQSPKYRFVVRFSNKQVICQIAYTLIDGDRILTSASSNELPRYGLKVGLKNYAASYCTGLLCARRLLQKVGLDDVYE---------------------GNDEIDGNVVKTQVGKSTYYVDEVDEDKRPFRALLDVGCKTTTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNTKYQAQFAGYLENEVEADGLEELYESVHEKIREDPSPSEKKAFSPDKSFKRKAKLTLEERKAAVQSKKDTKNAELEAED 304          
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A1E7FFB1_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFB1_9STRA)

HSP 1 Score: 379 bits (974), Expect = 4.400e-129
Identity = 198/325 (60.92%), Postives = 235/325 (72.31%), Query Frame = 1
Query:    1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRAARLAEE 975
            M F++  K+KAYF R+QVKFRRRREGKTDYR RKRL  QDKNKY SPKYR VVRFTN  V+ Q+ YA + GD  +CQA S EL RYG  VGLKNY A+YCTGLL  RRLL+++GLDE         LY            +G  EVDG V+STE   +TYYVDEVDE+KRPF+ALLDVG   T+T +RVFG ++G ADGGLD+P +EKRFP YDRD K YDA+ HR+RI+G HV+EYMEYL EED  KYKEHFA +IE  +  D +EE+Y+  H+ IR DPSP+ K AF+PDKSFK T KLTYD+RK  V  KKD  + A L EE
Sbjct:    1 MTFIQEGKSKAYFSRFQVKFRRRREGKTDYRQRKRLCAQDKNKYQSPKYRFVVRFTNTKVICQIAYALVDGDRILCQAQSTELGRYGLTVGLKNYGASYCTGLLCARRLLQKVGLDE---------LY------------EGNTEVDGEVVSTEHGKKTYYVDEVDEDKRPFRALLDVGCNPTTTGHRVFGALKGGADGGLDIPHSEKRFPGYDRDAKEYDADTHRERIFGGHVSEYMEYLEEEDNQKYKEHFAKFIEAGVEGDGLEELYESVHEKIRADPSPSEKKAFSPDKSFKRTAKLTYDERKAAVQLKKD-AKNAELEEE 303          
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Match: A0A7S1YV59_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YV59_TRICV)

HSP 1 Score: 379 bits (973), Expect = 6.030e-129
Identity = 194/319 (60.82%), Postives = 237/319 (74.29%), Query Frame = 1
Query:    1 MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYCTGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNVISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGGLDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVKLTYDQRKERVAAKKDEIRA 957
            M FVKVQ +KAY  RYQVK+RRRREG TDYR R+RL  QDKNKY SPKYRLVVRFTN+ V+ Q+ Y+ I GD  +CQA+S EL RYG +VGLKNYAAAYCTGLLV RRLL+++GLDE  E                     G  EVDG ++STE +G+ YYVDEVDE+KRPF+ LLDVG R T+T  R+FG ++GAADGGLD+P  EKRFP YDRD+K YDA++H++RI+G HV EYMEYL EED  KY+E FA YIEN++  D +EE+Y+  H+AIREDPSP+ K  F+PD S+K   KLT ++RK RV AKKD  +A
Sbjct:    1 MGFVKVQHSKAYSSRYQVKYRRRREGCTDYRQRRRLCTQDKNKYQSPKYRLVVRFTNRKVICQIAYSLIDGDRILCQANSDELPRYGLEVGLKNYAAAYCTGLLVARRLLQKVGLDETYE---------------------GNTEVDGEIVSTEVDGKKYYVDEVDEDKRPFRCLLDVGCRPTTTGCRIFGALKGAADGGLDIPHTEKRFPGYDRDSKEYDADMHKERIFGGHVGEYMEYLEEEDNQKYQECFAKYIENDVEADGLEELYEGVHEAIREDPSPSEKKDFSPDNSYKRKAKLTLEERKARVQAKKDAKKA 298          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCG3_9PHAE8.610e-18682.48Ribosomal_L18_c domain-containing protein n=2 Tax=... [more]
A0A1Z5J7J4_FISSO8.470e-13661.23Large subunit ribosomal protein L5e n=2 Tax=Fistul... [more]
A0A7S2S5W4_9STRA1.250e-13564.26Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A836CBG0_9STRA5.410e-13565.27RL5, ribosomal protein 5 60S large ribosomal subun... [more]
B7FPQ0_PHATC4.610e-13360.31Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A448Z3Q5_9STRA4.770e-13362.04Ribosomal_L18_c domain-containing protein n=1 Tax=... [more]
A0A7S0BVS7_9STRA4.970e-13162.97Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
B5YLN7_THAPS2.590e-13060.00RL5, ribosomal protein 5, 60S large ribosomal subu... [more]
A0A1E7FFB1_9STRA4.400e-12960.92RL5, ribosomal protein 5 60S large ribosomal subun... [more]
A0A7S1YV59_TRICV6.030e-12960.82Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:1346739..1347716 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score590.9
Seed ortholog evalue3.7e-166
Seed eggNOG ortholog2880.D8LR22
Preferred nameRPL5
KEGG koko:K02932
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categorymitochondrion
GOsGO:0000027,GO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0008097,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009987,GO:0010035,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010921,GO:0010922,GO:0012505,GO:0015031,GO:0015833,GO:0015934,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0017101,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0019899,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0023051,GO:0030162,GO:0030234,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031625,GO:0031647,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0033036,GO:0033365,GO:0034248,GO:0034250,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035303,GO:0035306,GO:0042176,GO:0042177,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0042886,GO:0043043,GO:0043085,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044389,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045727,GO:0045861,GO:0045937,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051336,GO:0051338,GO:0051340,GO:0051345,GO:0051348,GO:0051351,GO:0051438,GO:0051444,GO:0051641,GO:0051649,GO:0051716,GO:0055105,GO:0055106,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0070925,GO:0070972,GO:0071241,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901796,GO:1902531,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903630,GO:1903632,GO:1904666,GO:1904667,GO:1905015,GO:1905017,GO:1905018,GO:1905020,GO:1905021,GO:1905023,GO:1990904,GO:1990948,GO:2000058,GO:2000059,GO:2000112,GO:2000434,GO:2000435
EggNOG free text desc.5S rRNA binding
EggNOG OGsCOG0256@1,KOG0875@2759
Ec32 ortholog description60S ribosomal protein L5
Ec32 orthologEc-06_004660.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01009,ko03011
Exons1
Model size978
Cds size978
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927442.8552592-CDS-C-linearis_contig11:1346738..13477161622927442.8552592-CDS-C-linearis_contig11:1346738..1347716Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1346739..1347716 -
1690879703.0335972-CDS-C-linearis_contig11:1346738..13477161690879703.0335972-CDS-C-linearis_contig11:1346738..1347716Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1346739..1347716 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1231.1prot_C-linearis_contig11.1231.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 1346739..1347716 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1231.1

>prot_C-linearis_contig11.1231.1 ID=prot_C-linearis_contig11.1231.1|Name=mRNA_C-linearis_contig11.1231.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=326bp
MAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYR
LVVRFTNKYVLAQVIYATIQGDLCMCQASSKELSRYGCKVGLKNYAAAYC
TGLLVTRRLLRQLGLDEADEEKKMENLYTGQGVGVEEDGDDGEDEVDGNV
ISTESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTSNRVFGCMRGAADGG
LDVPQNEKRFPRYDRDTKSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYK
EHFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNTVK
LTYDQRKERVAAKKDEIRAARLAEE*
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mRNA from alignment at C-linearis_contig11:1346739..1347716-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1231.1 ID=mRNA_C-linearis_contig11.1231.1|Name=mRNA_C-linearis_contig11.1231.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=978bp|location=Sequence derived from alignment at C-linearis_contig11:1346739..1347716- (Chordaria linearis ClinC8C monoicous)
ATGGCCTTCGTCAAGGTCCAGAAGACAAAAGCGTACTTCAAGCGCTACCA GGTGAAGTTCCGGCGCCGTCGCGAGGGCAAGACCGACTACCGGGCCCGCA AGAGGTTGATTTGCCAGGACAAGAACAAGTACAACTCCCCCAAGTACCGC CTGGTGGTGCGCTTCACCAACAAGTACGTGCTGGCGCAGGTCATCTACGC CACCATCCAGGGCGACCTGTGCATGTGCCAGGCCTCCTCCAAGGAGCTCT CCCGGTACGGCTGCAAGGTCGGACTCAAGAACTACGCCGCGGCCTACTGC ACGGGTCTCCTGGTGACTCGCCGCCTGCTCCGCCAGCTGGGCCTCGACGA GGCCGACGAGGAGAAGAAGATGGAGAACCTCTACACCGGCCAGGGAGTCG GCGTGGAGGAGGACGGCGATGACGGCGAGGACGAGGTCGACGGAAACGTG ATCTCGACCGAGTCGAACGGACGCACGTACTACGTGGACGAGGTAGACGA GGAAAAGCGCCCCTTCAAGGCCCTCCTCGATGTCGGAATCCGGTCTACGT CGACGAGTAACCGCGTGTTCGGCTGCATGAGGGGCGCCGCGGACGGTGGC CTGGACGTGCCCCAAAACGAGAAGCGCTTCCCCCGCTACGACCGCGACAC CAAGTCGTACGACGCCGAGCTCCACCGCGACCGCATCTATGGCGCGCACG TGGCGGAGTACATGGAGTACCTAACCGAGGAAGACGAGGCCAAGTACAAG GAGCACTTCGCGTCCTACATCGAGAACGAGATCACCTTCGACGACGTCGA GGAGATGTACAAGGAGACCCACAAGGCCATCCGCGAGGACCCGTCCCCGG CCCCCAAGGCGGCCTTCACCCCGGACAAGTCCTTCAAGAACACGGTCAAG CTCACCTACGACCAGCGCAAGGAGAGGGTCGCCGCCAAGAAGGACGAGAT CCGCGCGGCCCGCCTGGCGGAGGAGTAG
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Coding sequence (CDS) from alignment at C-linearis_contig11:1346739..1347716-

>mRNA_C-linearis_contig11.1231.1 ID=mRNA_C-linearis_contig11.1231.1|Name=mRNA_C-linearis_contig11.1231.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at C-linearis_contig11:1346739..1347716- (Chordaria linearis ClinC8C monoicous)
ATGGCCTTCGTCAAGGTCCAGAAGACAAAAGCGTACTTCAAGCGCTACCA
GGTGAAGTTCCGGCGCCGTCGCGAGGGCAAGACCGACTACCGGGCCCGCA
AGAGGTTGATTTGCCAGGACAAGAACAAGTACAACTCCCCCAAGTACCGC
CTGGTGGTGCGCTTCACCAACAAGTACGTGCTGGCGCAGGTCATCTACGC
CACCATCCAGGGCGACCTGTGCATGTGCCAGGCCTCCTCCAAGGAGCTCT
CCCGGTACGGCTGCAAGGTCGGACTCAAGAACTACGCCGCGGCCTACTGC
ACGGGTCTCCTGGTGACTCGCCGCCTGCTCCGCCAGCTGGGCCTCGACGA
GGCCGACGAGGAGAAGAAGATGGAGAACCTCTACACCGGCCAGGGAGTCG
GCGTGGAGGAGGACGGCGATGACGGCGAGGACGAGGTCGACGGAAACGTG
ATCTCGACCGAGTCGAACGGACGCACGTACTACGTGGACGAGGTAGACGA
GGAAAAGCGCCCCTTCAAGGCCCTCCTCGATGTCGGAATCCGGTCTACGT
CGACGAGTAACCGCGTGTTCGGCTGCATGAGGGGCGCCGCGGACGGTGGC
CTGGACGTGCCCCAAAACGAGAAGCGCTTCCCCCGCTACGACCGCGACAC
CAAGTCGTACGACGCCGAGCTCCACCGCGACCGCATCTATGGCGCGCACG
TGGCGGAGTACATGGAGTACCTAACCGAGGAAGACGAGGCCAAGTACAAG
GAGCACTTCGCGTCCTACATCGAGAACGAGATCACCTTCGACGACGTCGA
GGAGATGTACAAGGAGACCCACAAGGCCATCCGCGAGGACCCGTCCCCGG
CCCCCAAGGCGGCCTTCACCCCGGACAAGTCCTTCAAGAACACGGTCAAG
CTCACCTACGACCAGCGCAAGGAGAGGGTCGCCGCCAAGAAGGACGAGAT
CCGCGCGGCCCGCCTGGCGGAGGAGTAGATGGCCTTCGTCAAGGTCCAGA
AGACAAAAGCGTACTTCAAGCGCTACCAGGTGAAGTTCCGGCGCCGTCGC
GAGGGCAAGACCGACTACCGGGCCCGCAAGAGGTTGATTTGCCAGGACAA
GAACAAGTACAACTCCCCCAAGTACCGCCTGGTGGTGCGCTTCACCAACA
AGTACGTGCTGGCGCAGGTCATCTACGCCACCATCCAGGGCGACCTGTGC
ATGTGCCAGGCCTCCTCCAAGGAGCTCTCCCGGTACGGCTGCAAGGTCGG
ACTCAAGAACTACGCCGCGGCCTACTGCACGGGTCTCCTGGTGACTCGCC
GCCTGCTCCGCCAGCTGGGCCTCGACGAGGCCGACGAGGAGAAGAAGATG
GAGAACCTCTACACCGGCCAGGGAGTCGGCGTGGAGGAGGACGGCGATGA
CGGCGAGGACGAGGTCGACGGAAACGTGATCTCGACCGAGTCGAACGGAC
GCACGTACTACGTGGACGAGGTAGACGAGGAAAAGCGCCCCTTCAAGGCC
CTCCTCGATGTCGGAATCCGGTCTACGTCGACGAGTAACCGCGTGTTCGG
CTGCATGAGGGGCGCCGCGGACGGTGGCCTGGACGTGCCCCAAAACGAGA
AGCGCTTCCCCCGCTACGACCGCGACACCAAGTCGTACGACGCCGAGCTC
CACCGCGACCGCATCTATGGCGCGCACGTGGCGGAGTACATGGAGTACCT
AACCGAGGAAGACGAGGCCAAGTACAAGGAGCACTTCGCGTCCTACATCG
AGAACGAGATCACCTTCGACGACGTCGAGGAGATGTACAAGGAGACCCAC
AAGGCCATCCGCGAGGACCCGTCCCCGGCCCCCAAGGCGGCCTTCACCCC
GGACAAGTCCTTCAAGAACACGGTCAAGCTCACCTACGACCAGCGCAAGG
AGAGGGTCGCCGCCAAGAAGGACGAGATCCGCGCGGCCCGCCTGGCGGAG
GAGTAG
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