mRNA_C-linearis_contig11.1229.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1229.1 vs. uniprot
Match: D8LU39_ECTSI (E3 ubiquitin-protein ligase listerin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU39_ECTSI) HSP 1 Score: 1858 bits (4812), Expect = 0.000e+0 Identity = 1305/2344 (55.67%), Postives = 1472/2344 (62.80%), Query Frame = 1
Query: 1177 YALVSACCRHAPGLLRP-------------PALAGNSASCGGDGAKGAESGK--GGAGXRRRSRVATPPLLVGLLSEEEESNHREAWQAALLVLREFQQTWVAEKGATAVLPTLLTRLRKGAFLATSGTSFPCLLPLLASLRLQTLLTPADGRAGAPPFCTALLETMWTTISNPGGXXXXGVDALGGERGGASGWLADMASAHVECATFLLLKLPPRSEGNASADDAVATDXXXXXXXXXXXXXXXXXXDPASVAGCVSAATENIVRAVKSLAVDDGEEDTLVAGEGLGGGLVQRAARKSPIIREAFSRALGQLHLGAEKGAGVMGSATGSAAVWGALLRELKGALDQRRVSWDGARWMGDALARALATVNERQGG------------DDAVQSTPAGPKSPRGAQDGGGLRGICRALFHHCVVAIGYID---GATEGEGLAAISPRDTPLVAFMSTVADALGMDGIFRMREPTPQGDSGSAGGGDGGETIEGVLSRDAATEFYEKFLVPRFAASSSXXXXAAGVG----ALKTIAERFLLAEDASRQASGFRLLLGKALAEPGRGWLRTATMVLRLAPSGMARDFPEIDAAVLRACGVSSPGAMPPSLSQPTAAQPG-------RTAAQDLPALLQASLGIREG--RAATGPFIKSSTVSEVVKVAIAPAGXXXXXXXXXXXXXXXXXXXXXAAGESXXXXXXXXAGRGCAGADYDGAA-----EDGTLAAVRKEGLSLLLAAFSGFGGGGRGADRLWRDCGAPVLDALVVADGGEDSTSASASPRTAGDNPLRRRGVWQDFLGGAVERARSAMEDGG---DGA-------------GGAERAATLAWALVDLQRTLQRRRRGGGGALPEDVPVLWRLGLTCPSVWRERRLEALAGRAEPGATPVAAATAADLARACVDSRWARRWECVSLILARLPDAPARLLLLTEGVVIRADNAAGDGAAGVAGEALHEILAAGVVVSRAERLLEGK-GYGGMATGNRFSVDLPPRLVSSPPAAT--GGGR------GGFDTVGEFGMGLSQFRGFLPPAAATAMAADQPGAVAAVASAGVLDAAAVHLGKTRTSAFKTPPPAKEAEAESSPIADSRQQQHPFSLLLPQGLWRVAFKPLAPSPAAPEDLLLHGVLLSAFLSGVKGMAEDAATVAAGDGGGAGEGGAWRVSCSAEISTGLLVAVVGEAFTRGLGLGDNATRLMASRCGVLKAPTPSDADLVPGARTLYTSNGQAVTVVVAHVDPGEPSGGYYTVRPVPEPGA-AVDPGLERQTVLERLSVLPPPSPSPRITGDATVTEAPACPWLVRPSVAGKLGALLAGPLLAIEQGLWEKLGRSSAGSGPEGPAVVSATAASLRGLASTCVRAALLCGDGGVEEEKEEKEGAADG--DQVWEGVRPRVRALRNRWAAAAVKSGSVAVAARVGGGSSPLEATA-TLALSTAVLSGFLAATPLLPSDEEGMRLMPARVRGALLAEAEAGAASSAAAALGWARAQRXXXXXXLRDCAEASTRVHVSPSAGSLDSQIFLDTQAETEAAVVALVSGG----RATSAVGGGCSADDLALARACGGLFAGESYRVSRGHPASLSCESKAAVVSWAVSKFLLSGGRIASXXXXXXXXXXXXXXVDDDI-ALCLENARLLTATAWDGRKGWGGARGXXXXXXXXAAGLINARADDRSRVWEAARAPAVWRGLHAAVVGAAGSPVLQLCAFEVLEAAAADWRCEVASPSPEGGGDDGAEEAKGSXXXXXXXXXXXXXXXXATAREAGGQSIASRVARALGGWGLASAQAGAXXXEGGRGDAGREGLEGGGEGVDLSSSEAVQEEARE--QQDDLELIARCFPEDLLLAVEALPSTIDALSEKPEAADR---GSYEIEEXXXXXXXXXXXXXXGEEADDGLAAQGEPAXXXDSGVD-----DPAS---------------SENGSQVVPSADSDTSEQGFEPYPDNDGAPAPP-LPPHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGRR-SPAAGPSLTAPFLTWLLWLEHCRRAAEQEAKAKSAARAFVVRAGSLAWVLEACFRVLRASQGVGGRGTSA----AARLGPAQAVRVSRLDLRDPHDLARLALAVYFRTVHVFPALTRCWWADDCARGQRVWVADFTQRHVSPALIQIEAQIIAEATDKGLWVQDGGEMSVRASSSSRQAKQVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQMACKTCSNRFHSSCLYKWFHTSHKNKCPICQQTWA 7869
YALVSACCRHAPGLLRP PA G + + G K ++ + GG +RSRVATP LL LLSE+E+SNHREAWQA LLVLREF++TW+AEKGA AVLPTLLTRLRKGAFLATS TS+PCLLPLLASL Q LL+PADGRAG PPFC A +E +W TI+ P G WLAD+ SAHVEC TFLLLKLPP +G A D XXXXXXXXXXXX + +S A V+AAT N+ +AV + EE+T G G G V+ A R+S I EAF R LGQLHLG EKGAGVMG+ +GSAAVWGALLRE +G LDQR S GA WMG L A+ VNER+ G ++ V++ P + +G+ G LR +CR LFHHCV AIGY+ G T+ E AAIS D PL AFMS++A ALGMDGIF M GD+ G G GG++ V++ D+A EFYE FLVPRF AS+ +G AL+++ + FLLAE+ RQ + FRLLL +ALAEP LRT TMVLRLAP+ MAR FPE+D A+LRACG+S PG P + +++ QDLPA LQA LG +G PF+K+STVSEV KV A + XXXXXXX + G G +G D + +D LAAVRK GLSLLLAAFS G G R ADRLWRD AP L LV+ ++ P G+WQDF+G AVE AR AME G DGA GG ERAATL AL+DL+ L RR G P+D PVLWRLGLT PSVWR+RRLEALA P+A A AADLARACV SRW+RRWECVSL+L RLPDA ARL LL EGVV A G GVAGEALHEILAAGV+VSRA RLL G+ G GG++ SVDLP L+ +P T GR GG D+V +FG+GL +FRG A D P AVAAVASA VLDAA HL +A L+G +A T + WR +CSA +S+GL+VAVVGEAF RGLGLGD A RLMA RCG KAP PS ADLVPGA+TLYTS+GQAVT+V AHVDPG G YYTVRP+P PG A D G ERQTVL RLSV PP SPR +G A P WLVRP+VA KLG +LAGP+ AIE+ LWE LGRS SGPE PA+ SATAA+LRG+ASTCVRAALLCG G A G + WEGVRP + LRNRWAAA T+AL+ +VLSGFLAATPL+PSDEEGMRLMPAR+RG+L EA AG A SAAAALGW R Q LRDCAEAS +VHVS S GSL S IF+ TQAETEAAVVALV R ++V GG S D LALARAC GLFA ES R+S+GH ASLSC+SKAAVVSWAVSKFLLSGGR+AS XXXXXXXXXXX ALCLE ARLLTATAWDG L+ AR D R++VWEAAR PAVWRGLHAAVVGA SPVLQLCAFEVLEAAAADWR + S GD+G+E AKG + GQSI SR+ARALGGWGLASAQAG XXX QQDDLELIA+CFPEDLLLAVEALPSTIDAL+E P+A+ R G+ E XXXXXXXXXXX + A + G D P S SE G SADS+ EQG DG AP XXXXXXXXXXXXXXXXXX GR RR +PA+GPSLT PFLTWLLWLEHCRRA+E EAK++SAAR FV RAG+L+ V+EACFRVLRASQ GGR S A+RLGPAQAVRVSRLD R PHDLARLALAVYFRTVHVFPAL+R WW+DDCARG RVWVADFT+RHVSPALIQIEAQII ATDKG+W DGGEMSVRAS++SRQ VVASYLKEECTLEAVIQLPP+YPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPK+MDLPQM CKTC+NRFHSSCLYKWFHTSHKNKCPICQQTWA
Sbjct: 2 YALVSACCRHAPGLLRPHPPLPPAKASSGDPAEEGKTEAVSDTGGKKEKANRRDGGGIAGKRSRVATPGLLAELLSEKEDSNHREAWQAVLLVLREFKETWMAEKGAAAVLPTLLTRLRKGAFLATSSTSYPCLLPLLASLPAQALLSPADGRAG-PPFCVAFVENLWVTIAKPSSGDAAGDRTGXXXXXXXXXWLADVVSAHVECVTFLLLKLPPAPQGLGEAGDTAXX----XXXXXXXXXXXXVDTERSSAAVSVAAATANLAKAVGVFVL---EEETGATGPGNG---VRTAGRRSQTISEAFGRVLGQLHLGGEKGAGVMGTTSGSAAVWGALLREFEGGLDQR--SRGGAAWMGKTLVHAMTAVNERKSGGARGSPGAATVAEETVENPTQPPTTAKGSHCTG-LREMCRTLFHHCVGAIGYVSPSSGVTDDEAGAAISSVDAPLTAFMSSMAGALGMDGIFCM------GDAALPGDGGGGDSRPSVVAPDSAREFYENFLVPRFVASAGGRRSTEAMGEAAMALESLTKAFLLAEEGPRQWNDFRLLLKRALAEPEVVRLRTTTMVLRLAPASMARVFPEVDEALLRACGISFPGTEPAAXXXXXXXXXXXSPRLHPKSSTQDLPAFLQACLGATDGGRERTAAPFVKASTVSEVAKVVTAASPSASTXXXXXXXEAAGVAIRPTLLPMAVLEGLLGVLGTGESGGPADSSRRGVGNDDDALAAVRKSGLSLLLAAFSAIGEG-RAADRLWRDVAAPTLQDLVLRAPRREAXXXXXXXXXX-PPPQWCDGIWQDFVGEAVEEARRAMEGNGVNDDGASDQGAPPLLLPGRGGVERAATLTSALLDLRSALLRR--GATLLPPDDAPVLWRLGLTRPSVWRQRRLEALAAGERSTGGPLATA-AADLARACVGSRWSRRWECVSLVLGRLPDARARLSLLVEGVV---SAEAEGGGVGVAGEALHEILAAGVMVSRAVRLLGGEEGRGGVS---EVSVDLPSCLLVAPAEDTISASGRMARAAAGGVDSVEDFGVGLRRFRGVSMGADG-----DDPEAVAAVASAEVLDAALAHLD------------------------------------------------------------------AAALAGXXXXXXEAGTAS------------WRTACSATVSSGLVVAVVGEAFARGLGLGDEANRLMAVRCGTYKAPVPSAADLVPGAKTLYTSDGQAVTIVAAHVDPGGGEG-YYTVRPIPAPGGTADDAGRERQTVLGRLSVTPP---SPRSSG-AVAAPPPHARWLVRPAVAAKLGEVLAGPVSAIERRLWEHLGRSPEMSGPEAPALSSATAAALRGVASTCVRAALLCGSN--------PRGTAGGGSQEAWEGVRPGILTLRNRWAAAXXXXXXXXXXXXXXXXXXXXXXXXXTVALAASVLSGFLAATPLMPSDEEGMRLMPARIRGSLCGEA-AGGAGSAAAALGWRRVQGTASLAWLRDCAEASCKVHVSASLGSLGSDIFVGTQAETEAAVVALVRSAVRRRRGDNSVVGGGSFD-LALARACAGLFAAESCRLSQGHAASLSCDSKAAVVSWAVSKFLLSGGRMASATAXXXXXXXXXXXXXXXXXALCLETARLLTATAWDG--------------------LLAARGD-RAKVWEAARFPAVWRGLHAAVVGAVASPVLQLCAFEVLEAAAADWRSDPVS------GDEGSEGAKGDDAGTPAGEEEGKGDGSSATAPGEGQSIVSRLARALGGWGLASAQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDDLELIAKCFPEDLLLAVEALPSTIDALAEAPQASARARSGTRREENIMAXXXXXXXXXXXXXXXXXXXXXDEKQAWGSEEGADVDSAERPTSDASAXXXXXXXXXXXSERGDAEEHSADSEP-EQGGGTADGTDGDIAPQSTASKSRXXXXXXXXXXXXXXXXXXTSDRGQAGNIPGGGRDRRRTPASGPSLTGPFLTWLLWLEHCRRASELEAKSRSAARVFVARAGALSPVMEACFRVLRASQDDGGRSNSGSIGGASRLGPAQAVRVSRLDPRKPHDLARLALAVYFRTVHVFPALSRSWWSDDCARGLRVWVADFTKRHVSPALIQIEAQIITRATDKGVW-DDGGEMSVRASANSRQ---VVASYLKEECTLEAVIQLPPDYPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKSMDLPQMTCKTCNNRFHSSCLYKWFHTSHKNKCPICQQTWA 2184
BLAST of mRNA_C-linearis_contig11.1229.1 vs. uniprot
Match: A0A6H5KS32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS32_9PHAE) HSP 1 Score: 1527 bits (3954), Expect = 0.000e+0 Identity = 1093/2120 (51.56%), Postives = 1253/2120 (59.10%), Query Frame = 1
Query: 1177 YALVSACCRHAPGLLRPPA--------------------------------------LAGNSASCGGDGAKGAESGKGGAGXRRRSRVATPPLLVGLLSEEEESNHREAWQAALLVLREFQQTWVAEKGATAVLPTLLTRLRKGAFLATSGTSFPCLLPLLASLRLQTLLTPADGRAGAPPFCTALLETMWTTISNPGGXXXXGVDALGGERGGASGWLADMASAHVECATFLLLKLPPRSEGNASADDAVATDXXXXXXXXXXXXXXXXXXDPASVAGCVSAATENIVRAVKSLAVDDGEEDTLVAGEGLGGGLVQRAARKSPIIREAFSRALGQLHLGAEKGAGVMGSATGSAAVWGALLRELKGALDQRRVSWDGARWMGDALARALATVNERQG------------GDDAVQSTPAGPKSPRGAQDGGGLRGICRALFHHCVVAIGYID---GATEGEGLAAISPRDTPLVAFMSTVADALGMDGIFRMREPTPQGDSGSAGGGDGGETIEGVLSRDAATEFYEKFLVPRFAASSSXXXXAAGVG----ALKTIAERFLLAEDASRQASGFRLLLGKALAEPGRGWLRTATMVLRLAPSGMARDFPEIDAAVLRACGVSSPG----AMPPSLSQPTAAQPGRTAAQDLPALLQASLGIREG--RAATGPFIKSSTVSEVVKVAIAPAGXXXXXXXXXXXXXXXXXXXXXAAGESXXXXXXXXAGRGCAGADYDGAA-----EDGTLAAVRKEGLSLLLAAFSGFGGGGRGADRLWRDCGAPVLDALVVADGGEDSTSASASPRTAGDNPLRRRGVWQDFLGGAVERARSAMEDGG---DGA-------------GGAERAATLAWALVDLQRTLQRRRRGGGGALPEDVPVLWRLGLTCPSVWRERRLEALAGRAEPGATPVAAATAADLARACVDSRWARRWECVSLILARLPDAPARLLLLTEGVVIRADNAAGDGAAGVAGEALHEILAAGVVVSRAERLLEGK-GYGGMATGNRFSVDLPPRLVSSPP----AATGG---GRGGFDTVGEFGMGLSQFRGFLPPAAATAMAADQPGAVAAVASAGVLDAAAVHLGKTRTSAFKTPPPAKEAEAESSPIADSRQQQHPFSLLLPQGLWRVAFKPLAPSPAAPEDLLLHGVLLSAFLSGVKGMAEDAATVAAGDGGGAGEGGAWRVSCSAEISTGLLVAVVGEAFTRGLGLGDNATRLMASRCGVLKAPTPSDADLVPGARTLYTSNGQAVTVVVAHVDPGEPSGG---YYTVRPVPEP-GAAVDPGLERQTVLERLSVLPPPSPSPRITGDATVTEAPACPWLVRPSVAGKLGALLAGPLLAIEQGLWEKLGRSSAGSGPEGPAVVSATAASLRGLASTCVRAALLCGDGGVEEEKEEKEGAADG--DQVWEGVRPRVRALRNRWAAAAVKSGSVAVAARVGGGSSPL-EATATLALSTAVLSGFLAATPLLPSDEEGMRLMPARVRGALLAEAEAGAASSAAAALGWARAQRXXXXXXLRDCAEASTRVHVSPSAGSLDSQIFLDTQAETEAAVVALV-SGGRA----TSAVGGGCSADDLALARACGGLFAGESYRVSRGHPASLSCESKAAVVSWAVSKFLLSGGRIASXXXXXXXXXXXXXXV--DDDIALCLENARLLTATAWDGRKGWGGARGXXXXXXXXAAGLINARADDRSRVWEAARAPAVWRGLHAAVVGAAGSPVLQLCAFEVLEAAAADWRCEVASPSPEGGGDDGAEEAKGSXXXXXXXXXXXXXXXXATAREAGGQSIASRVARALGGWGLASAQAGAXXXEGG---------RGDAGREGLEGGGEGVDLSSSEAVQEEAREQQDDLELIARCFPEDLLLAVEALPSTIDALSEKPEAADR-------------------GSYEIEEXXXXXXXXXXXXXXGEEADDGLAAQGEPAXXXDSGVDD-PASSENGSQVVP-SADSDTSEQGFEPYPDNDGAPAPPLPPHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGRR-SPAAGPSLTAPFLTWLLWLEHCRRAAEQEAKAKSAARAFVVRAGSLAWVLEACFRVLRASQ 7125
YALVSACCRHAPGLL P +AGN+ SRVATP LLV LLSEEE+SNHREAWQA LLVL EF++TW+AEKGA AVL TLLTRLRKGAFLATSGTS+PCLLPLLASL LL+PADGRAG PPFC AL+E +W TI+ G D GG G GWLAD+ SAHVEC TFLLLKLPP S+G A D A + +S V+AAT N+ +AV + EE+T GLG GL + R+S I EAF RALGQLHLG EKGAGV+G+ +GSAAVWGALLRE + LDQR GA W+G L RA+ +NER+ ++ VQS P+ P + G GLR +CR LFHHCV AIGY+ G T+ + AAIS D PL FMS +A ALGM GIF M + DSG+ G++ V+ D+A EFYE FLVPRF AS+ G AL+++ + FLLAED RQ+ FRLLL +ALAEP WLRT TMVLRLAP+ MAR FPE+D A+LRACG+S PG A PPS S +P +++ QDL A LQA LG +G PF+K+ TVSEVVKVA A + + G G +G D + +D LAAVRK GLSLLL AFS G G R ADRLWRD AP L LV+ P G+WQ+FLGGAVE AR AME G DGA GG ERAATL AL+DL+ L RR G P+D P+LWRLGLT PSVWR+RRLEALA A P+A TAADLARACV SRWARRWECVSL+LARLPDA ARL LL EGVV A G+ GVAGEALHEI AAGV+VSRA RLL+G+ G GG+ SVDLP L+ +P +A+GG G D+V +FG+GL +FRG + A D P AVAAVASA VLDAA HLG+ AF EAEA+ +A Q PFSLLLPQGLWRVAF+ A +D LH VLLSA S + A+DA AWR +CSA +S+GL+VAVVGEA RGLGLGD RLMA RCG KAP PS ADLVPGA+TLYTS+GQAVT+V AHVDPG GG YYTVRP+PE GAA D G ERQTVL RLSV PSPR DA A WLVRP+VA KLG +LAGP+ AIE+ LWE +GRS SGPE PA+ SATAA+LRG+ASTCVRAALLCG + G A G + WE VRP + LRNRWAAAA K +A AT+AL+ +VLSGFLAATPL+PS+EEGMRLMPAR+RGAL EA AG A SAAAALGW RAQ LRDCA+AS +VHVSPS GSL S IF+ T AETE AVVALV S GR S VGGG DLALARAC GLFA ES R+S+GH ASLSC+SKAAVVSWAVSKFLLSGGR+AS DDD ALCLE ARLLTATAWDGR L+ AR D R++VWEAAR+PAVWRGLHAAVVGA SPVLQLCAFEVLEAAAADWR + S GD+ E AKG + GQSI SR+ RALGGWGLASAQAG EGG RGDA G G +EAV+EEA+EQQDDLELIA+CFPEDLLLAVEALPSTIDAL+E P+A+ R G Y+ E EE D +A+ D+ SE+G P SADS+ G D D AP XXXXXXXXXXXXXXXXX GR RR +PA+GPSLT PFLTWLLWLEHCRRA+E E K++SAARAFV RAG+L V+EACF VLRASQ
Sbjct: 2 YALVSACCRHAPGLLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGNT-----------------------SRVATPGLLVELLSEEEDSNHREAWQAVLLVLGEFKETWMAEKGAAAVLTTLLTRLRKGAFLATSGTSYPCLLPLLASLPADALLSPADGRAG-PPFCVALVENLWVTIAKSSSRDAAG-DRTGG---GGGGWLADVVSAHVECVTFLLLKLPPASQGLGEAGDTAAASTSGDIPGVGRGVDT----ERSSATLSVAAATANLAKAVGVFVL---EEET--GATGLGNGL-RTVGRRSQTISEAFGRALGQLHLGGEKGAGVVGTTSGSAAVWGALLREFEEGLDQR----GGAAWIGKTLVRAMTAINERKSRGAWGSPGAATVAEETVQS-PSQPLATDRGPHGTGLRELCRTLFHHCVGAIGYVSPSSGVTDDDAGAAISSVDAPLTTFMSNMAGALGMGGIFCMGDAALSDDSGN------GDSKPSVVPPDSAREFYENFLVPRFVASAGGRRSMEATGEATMALESLTKAFLLAEDGPRQSDDFRLLLKRALAEPEAVWLRTTTMVLRLAPASMARVFPEVDEALLRACGISLPGTEPAAAPPSSSSSERLRP-KSSTQDLTAFLQACLGATDGGRERTAAPFVKAVTVSEVVKVATAASLSASTFNSAGTAEAADAAIRPTLLSMAVLEGLLGVLGTGESGGPADSSRGGVGNDDDALAAVRKSGLSLLLGAFSAIGEG-RAADRLWRDVAAPTLQDLVLRGPRRAXXXXXXXXXXXXXXPQWCDGIWQEFLGGAVEEARRAMEGDGVHDDGASDQGAPPLLLAGRGGVERAATLTSALLDLRSALLRR--GATLLPPDDAPMLWRLGLTRPSVWRQRRLEALAAEARSTGAPLAT-TAADLARACVGSRWARRWECVSLVLARLPDAKARLSLLVEGVV---SAEAEGGSVGVAGEALHEIFAAGVMVSRAVRLLKGEEGRGGVL---EVSVDLPSCLLVAPAEDKISASGGMARAAAGVDSVEDFGVGLQRFRG-----GSMAADGDDPEAVAAVASAEVLDAALAHLGEQSQGAF-------EAEADGYGVAS----QQPFSLLLPQGLWRVAFESAATDT---KDERLHAVLLSALSSCLALAAQDAXXXXXXXXXXXXVAAAWRTACSATVSSGLVVAVVGEALARGLGLGDEVNRLMAVRCGTYKAPVPSAADLVPGAKTLYTSDGQAVTIVAAHVDPGYRKGGGEGYYTVRPIPEADGAADDAGRERQTVLGRLSVT---HPSPRTLVDAPPQHAR---WLVRPAVAAKLGEVLAGPVFAIERRLWEHIGRSPELSGPEAPALSSATAAALRGVASTCVRAALLCGS--------DPRGTAGGGSQEAWERVRPGILTLRNRWAAAAAKXXXXXXXXXXXXXXXXXXQAAATVALAASVLSGFLAATPLMPSEEEGMRLMPARIRGALCEEA-AGGAGSAAAALGWRRAQGTASLAWLRDCADASCKVHVSPSPGSLGSDIFVATHAETEVAVVALVRSAGRRRGGDNSVVGGGSF--DLALARACAGLFAAESCRLSQGHAASLSCDSKAAVVSWAVSKFLLSGGRMASGTAAEGGDLAGSFGGGDDDDAALCLETARLLTATAWDGR-------------------LLAARGD-RAKVWEAARSPAVWRGLHAAVVGAVASPVLQLCAFEVLEAAAADWRGDPVS------GDEEPEGAKGDDAGTPGEEEESKDDGSSATAPGEGQSIVSRLGRALGGWGLASAQAGGGA-EGGVVDVEGSDERGDADE------GAGSSSPGTEAVEEEAKEQQDDLELIAKCFPEDLLLAVEALPSTIDALAEAPQASARARGGARRQDIMAAHEEEEEGDYDDSEAEEEDVEDEKHAWDSEEVADVDSAERSTCVASPGEEDEIEGGSESGGAEEPHSADSEAEGGGTTDKADGDNAPQSTA---SKSRXXXXXXXXXXXXXXXXXSDRGQAGNIPGGGRDRRRTPASGPSLTGPFLTWLLWLEHCRRASELEVKSRSAARAFVARAGALTPVMEACFGVLRASQ 1989
BLAST of mRNA_C-linearis_contig11.1229.1 vs. uniprot
Match: A0A7S4DAB1_HETAK (E3 ubiquitin-protein ligase listerin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAB1_HETAK) HSP 1 Score: 276 bits (706), Expect = 7.920e-79 Identity = 131/230 (56.96%), Postives = 168/230 (73.04%), Query Frame = 1
Query: 7177 AVRVSRLDL--RDPHDLARLALAVYFRTVHVFPALTRCWWADDCARGQRVWVADFTQRHVSPALIQIEAQIIAEATDKGLWVQDGGEMSVRASSSSRQAKQVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQMACKTCSNRFHSSCLYKWFHTSHKNKCPICQQ 7860
A+ VS +DL D D+ + V+++TV FPAL R WW+ DC RG V+ FT+ HV P ++Q E I EA G W D EM+VR S SR+ V A+Y+K+EC+LE VI++P YPL NVEV C++R+GV+E RWR+WVLQIVTLL QDGSVLDAV++WK+NVD+EFEGV+PC IC+S+L+PK LP + CKTC N+FHS+CLYKWFHTS KNKCP+CQQ
Sbjct: 138 AMVVSEMDLAAEDSKDMMPFCMKVFYQTVEAFPALVRHWWSHDCRRGLNGRVSRFTEEHVGPMIMQREIDKIREAEANGKWG-DTSEMTVRGSKVSRE---VTATYMKDECSLEVVIKVPASYPLANVEVNCTRRLGVAEGRWRRWVLQIVTLLGTQDGSVLDAVLLWKQNVDREFEGVDPCPICFSILYPKDHALPTLPCKTCQNKFHSACLYKWFHTSRKNKCPLCQQ 363
BLAST of mRNA_C-linearis_contig11.1229.1 vs. uniprot
Match: D8LU37_ECTSI (E3 ubiquitin-protein ligase listerin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU37_ECTSI) HSP 1 Score: 268 bits (684), Expect = 2.170e-77 Identity = 167/258 (64.73%), Postives = 189/258 (73.26%), Query Frame = 1
Query: 43 MKDKKNDGEGGGRPRGSRKNIVGSESQGLLQAAAGSGFIGXXXXXXXXXXXXXXXXXXXXG--GASPAGVKASAGTGSRGQRRVKMATVDGGRSSGSVGRQVLPPHYSGGNSHLAVVSKRLSKRDVTTKLKALTELRSMCSF--QQSLLPTSPLLLVCQ------SRLITGDAQAAATAAAPAAG--SSATSAEDLGGLAPHWVFIYQRLSAEGDRRTREAANTTLLCMLRANRRAFQPLMRSLMGAWWCSQADTASE 780
MK+KK +G GG RPRGSRKNIVGSESQGLLQAAAG+GFIG G G++PAG KA AG+G G+RRVKMA V+GG S+GS G QVLPPHYSG +SHLAVVSKRLSKRDVTTKLKAL ELR+MC +++ L SP Q SR +G A A+ AA ++ + ATSAEDLGGLAPHWVF+YQRLSAEGDRRTREAANTTLLCML+ NRRAFQPLM SLMG W+CSQADTA E
Sbjct: 1 MKEKKKEGAGG-RPRGSRKNIVGSESQGLLQAAAGTGFIGFSAFQTAAKASPTTADVEGGGTAGSTPAG-KAGAGSGHGGKRRVKMAKVNGGYSAGSAG-QVLPPHYSGSDSHLAVVSKRLSKRDVTTKLKALAELRAMCRLVTREAELAASPQPGPGQDSRAGTSRASSGVAPASGAGAAESSAMDTPATSAEDLGGLAPHWVFLYQRLSAEGDRRTREAANTTLLCMLKGNRRAFQPLMSSLMGPWFCSQADTAPE 255
BLAST of mRNA_C-linearis_contig11.1229.1 vs. uniprot
Match: A0A2P4YRS2_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YRS2_9STRA) HSP 1 Score: 257 bits (656), Expect = 5.610e-70 Identity = 115/217 (53.00%), Postives = 160/217 (73.73%), Query Frame = 1
Query: 7225 RLALAVYFRTVHVFPALTRCWWADDCARGQRVWVADFTQRHVSPALIQIEAQIIAEATDKGL-----WVQDGGEMSVRASSSSRQAKQVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQMACKTCSNRFHSSCLYKWFHTSHKNKCPICQQ 7860
+L V+FRTV PA+ R WW DDC+R R W A + + H++P+++ E +I +A + L W D EM+V+ SR ++++ +Y+K+EC LE V+++P YPLR VEV C+KR+G+SE RWR+WVLQI+ + S +DGS+LDAV++WK+NVDKEFEGVEPC ICYS+L+PK M LP + CKTC+N++H+SCLYKWF+ S KNKCPICQQ
Sbjct: 329 QLGTCVFFRTVVRLPAMVRSWWNDDCSRAARSWAAKYFEDHITPSVLAAELDLIQKAGENTLTGGESW--DDEEMTVKG---SRVSREITTTYMKDECALEMVVRVPSSYPLRCVEVECTKRIGISEDRWRRWVLQIIRVTSSRDGSLLDAVLLWKRNVDKEFEGVEPCPICYSILNPKNMGLPSLPCKTCNNKYHNSCLYKWFNQSGKNKCPICQQ 540
BLAST of mRNA_C-linearis_contig11.1229.1 vs. uniprot
Match: A0A1V9ZGZ7_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGZ7_9STRA) HSP 1 Score: 273 bits (698), Expect = 8.910e-70 Identity = 126/217 (58.06%), Postives = 165/217 (76.04%), Query Frame = 1
Query: 7210 PHDLARLALAVYFRTVHVFPALTRCWWADDCARGQRVWVADFTQRHVSPALIQIEAQIIAEATDKGLWVQDGGEMSVRASSSSRQAKQVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQMACKTCSNRFHSSCLYKWFHTSHKNKCPICQQ 7860
P LA LA A+++RTV P + R WW D+C+R R WVA F + +VSP L+Q E I A +K LW D EM+VR S SR+ VV SY+K+EC+LE V+++P YPLR+VEV C+KR+G+SE RWR+WVLQI+ + S QDGS+LDAV++WK NVD+EF+GV+PC ICYS+L+PKTM LP ++CKTC N++H+SCLYKWF+ S KNKCPICQQ
Sbjct: 1456 PGLLAPLAGALFYRTVVKLPTMVRLWWNDECSRSARSWVAKFCEENVSPLLLQEEIAAIHAAAEKDLW--DPEEMNVRGSKVSRE---VVTSYIKDECSLEMVVRVPASYPLRSVEVECTKRIGISEERWRRWVLQIIKVTSSQDGSLLDAVLLWKSNVDREFDGVDPCPICYSILNPKTMGLPNLSCKTCKNKYHNSCLYKWFNQSSKNKCPICQQ 1667
BLAST of mRNA_C-linearis_contig11.1229.1 vs. uniprot
Match: A0A485KRY7_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRY7_9STRA) HSP 1 Score: 271 bits (694), Expect = 2.500e-69 Identity = 150/318 (47.17%), Postives = 200/318 (62.89%), Query Frame = 1
Query: 6940 RSPAAGPSLT--APFLTWLLWLEHCRRAAEQEAKAKSAARAFVVRAGSLAWVLEACFRVLRASQGVGGRGTSAAARLGPAQAV---------RVSRLDLRDPHDLARLALAVYFRTVHVFPALTRCWWADDCARGQRVWVADFTQRHVSPALIQIEAQIIAEATDKGLWVQDGGEMSVRASSSSRQAKQVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQMACKTCSNRFHSSCLYKWFHTSHKNKCPICQQ 7860
RS A P+ T AP L W L+L SA AFV + L L C L+A+ + T++++ P A ++ LD+ +A LA AV++RTV P + R WW DDC R R WVA F + +VSP L+ E + I + LW D EM+VR S SR+ + +YLK+ECTLE VI++PP YPLR+VEV C+KR+G+SE RWR+WVLQI+ + + QDGS+LDAV++WK NVDKEF+GVEPC IC+S+L+PKTM LP + C+TCSN++H+SCLYKWF+ S KNKCPICQQ
Sbjct: 1334 RSAMATPATTTLAPLLVWDLFLRMFPSTTSP--LVTSALGAFVTQHHLLGPFLTLCGHHLQAAT----KATASSSTTLPTAAAVDAAFPTLSTLAALDVASA--VAPLAAAVFYRTVVKLPTMVRLWWNDDCTRSTRSWVAKFCEENVSPLLLVEEIRAIQVGGETALW--DADEMTVRGSKVSRE---ITTTYLKDECTLEMVIRVPPSYPLRSVEVECTKRIGISEERWRRWVLQILKVTASQDGSLLDAVLLWKSNVDKEFDGVEPCPICFSILNPKTMGLPNLQCRTCSNKYHNSCLYKWFNQSSKNKCPICQQ 1638
BLAST of mRNA_C-linearis_contig11.1229.1 vs. uniprot
Match: A0A067CAS8_SAPPC (E3 ubiquitin-protein ligase listerin n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAS8_SAPPC) HSP 1 Score: 270 bits (691), Expect = 5.970e-69 Identity = 123/224 (54.91%), Postives = 170/224 (75.89%), Query Frame = 1
Query: 7189 SRLDLRDPHDLARLALAVYFRTVHVFPALTRCWWADDCARGQRVWVADFTQRHVSPALIQIEAQIIAEATDKGLWVQDGGEMSVRASSSSRQAKQVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQMACKTCSNRFHSSCLYKWFHTSHKNKCPICQQ 7860
+++D D L+ LA A+++RTV P + R WW D+C+R R WVA F + ++SP L+Q E I +++K LW D EM+VR S SR+ ++ SY+K+EC+LE VI++P YPLR+VEV C+KR+G+SE RWR+WVLQI+ + S QDGS+LDAV++WK NVD+EF+GV+PC ICYS+L+PKTM LP + CKTC+N++H+SCLYKWF+ S KNKCPICQQ
Sbjct: 1447 AQIDFSD--RLSPLAAALFYRTVLKLPTMVRLWWNDECSRSARSWVAKFCEENISPLLLQEEIAAIHASSEKDLW--DPEEMTVRGSKVSRE---IITSYIKDECSLEMVIRVPASYPLRSVEVECTKRIGISEERWRRWVLQIIKVTSSQDGSLLDAVLLWKTNVDREFDGVDPCPICYSILNPKTMGLPNLPCKTCNNKYHNSCLYKWFNQSSKNKCPICQQ 1663
BLAST of mRNA_C-linearis_contig11.1229.1 vs. uniprot
Match: A0A835ZJN0_9STRA (E3 ubiquitin-protein ligase listerin (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJN0_9STRA) HSP 1 Score: 239 bits (610), Expect = 1.000e-68 Identity = 110/176 (62.50%), Postives = 142/176 (80.68%), Query Frame = 1
Query: 7342 RHVSPALIQIEAQIIAEATDKGLWVQDGGEMSVRASSSSRQAKQVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQMACKTCSNRFHSSCLYKWFHTSHKNKCPICQQTWA 7869
RHV+PA+I E ++ A G W +G ++VRAS + +VVA+Y+K+E L I+LPP YPLR VEV+C++++G+ E+RWR+WVLQIVTLLS++DGSVLDAV++WK+NVDKEFEG+EPCVICYS LHP+ M LP +AC+TCSNRFH SCLYKWF TSHK+KCP+CQQTWA
Sbjct: 1 RHVTPAIIAREIAHLSSARAGGRWDSEG--LAVRASEA---VGEVVATYVKDESELSMTIRLPPSYPLRAVEVSCARQLGIGEARWRRWVLQIVTLLSVRDGSVLDAVLLWKRNVDKEFEGMEPCVICYSTLHPRDMALPTLACRTCSNRFHPSCLYKWFQTSHKSKCPLCQQTWA 171
BLAST of mRNA_C-linearis_contig11.1229.1 vs. uniprot
Match: A0A6G0WLG8_9STRA (E3 ubiquitin-protein ligase listerin n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLG8_9STRA) HSP 1 Score: 268 bits (685), Expect = 2.890e-68 Identity = 146/308 (47.40%), Postives = 201/308 (65.26%), Query Frame = 1
Query: 6961 SLTAPFLTWLLWLEHCRRAAE-QEAKAKSAARAFVVRAGSLAWVLEACFRVLRASQGVGGRGTSAAARLGPAQAVRVS--RLDLRDPH-DLARLALAVYFRTVHVFPALTRCWWADDCARGQRVWVADFTQRHVSPALIQIEAQII-AEATDKGLWVQDGGEMSVRASSSSRQAKQVVASYLKEECTLEAVIQLPPEYPLRNVEVTCSKRMGVSESRWRQWVLQIVTLLSLQDGSVLDAVMMWKKNVDKEFEGVEPCVICYSVLHPKTMDLPQMACKTCSNRFHSSCLYKWFHTSHKNKCPICQQTWA 7869
S +AP L+W + R E SA AFV R L +L C VL++S+ +LG +AV + LD D +A LA AV++RTV P + R WW D+C+R R WV+ F + VSP ++ E Q I A + ++ LW D EM+VR S SR+ + +YLK+EC+LE VI++PP YPLR VEV C+KR+G+SE RWR+W+LQI+ + + QDGS+LDAV++WK NVDKEF+GVEPC IC+S+L+PKTM LP + C+TC+N++H+SCLYKWF+ S KNKCPICQQ ++
Sbjct: 1343 STSAPLKLLLVWDLYLRMFPETSNPLVTSALGAFVGRQKLLTPLLTLCGHVLQSSK----------VQLGSNEAVEGAFPALDGLDREIAVAPLAAAVFYRTVVKLPTMVRLWWNDECSRSARSWVSKFCEELVSPLMLNEEIQSIQAASAEQSLW--DPDEMTVRGSKVSRE---ITTTYLKDECSLEMVIRVPPSYPLRTVEVECTKRIGISEERWRRWILQILKVTTSQDGSLLDAVLLWKSNVDKEFDGVEPCPICFSILNPKTMGLPNLPCRTCNNKYHNSCLYKWFNQSSKNKCPICQQPFS 1635 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1229.1 >prot_C-linearis_contig11.1229.1 ID=prot_C-linearis_contig11.1229.1|Name=mRNA_C-linearis_contig11.1229.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2611bp MMKDKKNDGEGGGRPRGSRKNIVGSESQGLLQAAAGSGFIGFSAFQTPATback to top mRNA from alignment at C-linearis_contig11:1299998..1319603- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1229.1 ID=mRNA_C-linearis_contig11.1229.1|Name=mRNA_C-linearis_contig11.1229.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=19606bp|location=Sequence derived from alignment at C-linearis_contig11:1299998..1319603- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:1299998..1319603- >mRNA_C-linearis_contig11.1229.1 ID=mRNA_C-linearis_contig11.1229.1|Name=mRNA_C-linearis_contig11.1229.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=15666bp|location=Sequence derived from alignment at C-linearis_contig11:1299998..1319603- (Chordaria linearis ClinC8C monoicous)back to top |