mRNA_C-linearis_contig11.1224.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1224.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 561 bits (1445), Expect = 4.460e-183 Identity = 333/575 (57.91%), Postives = 418/575 (72.70%), Query Frame = 2
Query: 227 DFDPSSFIPTYTPTDKALALFRLTFAASLFVLGSYALVCFYRSRWVLDIRTRSAYLVMLEGVCVLLTMLVSMNGSANVVWGKGTDWLYNSLVLFFITPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYMTVLLIGSLGMLAIPLYDEYNLPIWEIIPKQTSVLAWVSIAFSVVLACLYPFIRKVDDLFNISKELIAVTVVIMLLSIGQKVIRDYAGVYVQRWLGDNLSIFCAACLFGISVVDPLRRLAFDPLAATKQNYADRVLLARSQPRSTAKTS------LGLSSGIGNDSEDEARLEQGS-----SSIRLATRGVKSDGNGSVSSSTGLGNSGVDPSNSSASIFVATDSVDATAATSAS-STAIDHYENS---QRAGANGGERENGXXXXXXXXXXXXX-DGEAVELWDFERLGRTPLLAAAFEDFSRRALCHESVLFLSEVSLYQNGDFGSSSTSP---PSQFSMFCYITDTFIKAGSIEEVNISDADKKQIIDLYHRGEATFEAVHEEERRLVFMQAYVEVRQMLEANLLRRFLMTDQFKNVRMRRENLQAMMDSPQ-QAGVAAV 1891
DFDPS P+Y TDKALAL RL VLG+YALV FYRSRW+LDIRTRSA+LV L+GV +LL+MLV++NG+ +VW G DW + SL+LFF++PALFGSYICRALRLAVVF+P+AK ALPWLIPERNY+ VLL+ S+G+LAIP+Y EY L +W+ IPKQTS+L + +V+L C+YPFIR VDDLFNIS ELI VTV I++++I Q+V+ + G + QRWL N+S+ A LF IS+V PLRRLA DPLAATK+NYADRVLL+R++ ST S G SS I +DS+DE E A GV G V++S+ + SGV ++++ + VA + T A+ ST++ S +R G+R GXXXXXXXXXXXX D E +E+WDFERLGRTPLLAAAFED+S+RALCHESVLFLSEVS YQN D+ + + + P+QF FCYITDTFIKAG+ EEVNISD D+K I++LY +GE +FE V+EEERR+VF ++Y+EV+ MLEANLLRRFL TDQFK+VR +REN+QAMMDSP AGVAA
Sbjct: 46 DFDPSDLFPSYNRTDKALALVRLGLGCCFIVLGTYALVRFYRSRWILDIRTRSAHLVTLQGVSLLLSMLVTVNGATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKSALPWLIPERNYLAVLLLASIGILAIPIYHEYTLEVWDAIPKQTSILKAQARVLAVMLVCIYPFIRNVDDLFNISTELITVTVTIVVVTIVQEVVDKWGGNFEQRWLTSNISVVFVAVLFCISIVAPLRRLALDPLAATKRNYADRVLLSRTESHSTRSASGISPERAGRSSRIVDDSDDEVAFEDEELGGVPGMDTTAAAGVGGGSTGKVATSSAVVGSGVITTSTADANVVAPRTWKGREMTIANGSTSVPKGSGSTGKRRDAVQRGQRGRGXXXXXXXXXXXXPSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAGTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSPPLPAGVAAA 620
BLAST of mRNA_C-linearis_contig11.1224.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI) HSP 1 Score: 537 bits (1384), Expect = 2.280e-175 Identity = 307/532 (57.71%), Postives = 384/532 (72.18%), Query Frame = 2
Query: 380 RSAYLVMLEGVCVLLTMLVSMNGSANVVWGKGTDWLYNSLVLFFITPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYMTVLLIGSLGMLAIPLYDEYNLPIWEIIPKQTSVLAWVSIAFSVVLACLYPFIRKVDDLFNISKELIAVTVVIMLLSIGQKVIRDYAGVYVQRWLGDNLSIFCAACLFGISVVDPLRRLAFDPLAATKQNYADRVLLARSQPRSTAKTSLGLSSGIGND-------SEDEARLEQGS-----SSIRLATRGVKSD-------GNGSVSSSTGLGNSGVDPSNSSASIFVATDSVDATAATSASSTAIDHYE--NSQRAGANGGERENGXXXXXXXXXXXXX--DGEAVELWDFERLGRTPLLAAAFEDFSRRALCHESVLFLSEVSLYQNGDFGSSST----SPPSQFSMFCYITDTFIKAGSIEEVNISDADKKQIIDLYHRGEATFEAVHEEERRLVFMQAYVEVRQMLEANLLRRFLMTDQFKNVRMRRENLQAMMDSPQ-QAGVAAV 1891
RSA+LVM+EGVCVLLTM+V++NGS NVVW G DW + SL+LFFI+PAL GSYICRALRLAVVFHP+AKRALPWLIPERNYM VLL+ S+GM+AIP+Y EY L +WEIIPKQT++L ++ F+V LAC+YPFIR VDDLFNISKEL+ VTV I+ L++ QK ++ GVY QRW+G+N+SIF AA LFGIS+VDPLRRLA DPLAATK+NYADRVLL+R+ P ST +T+ G+SSG D SE+EARLE+G T G S+ GNG +++ST N V +A + + ++ + T SS+ + ++R G RE + E +E+W+FERL RTPLLA AFED+S+RALCHESVLFL+EVS YQ+ D+ + + S PSQF FCYIT+TFIKAGS EEVNISDADKK+I++LY +GE FE V+EEERRL+F +AY+EV+ MLEANLLRRFL TD+FK+VRM+REN+Q MMDSP AGVAA
Sbjct: 3 RSAHLVMVEGVCVLLTMVVAVNGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMVVLLVVSVGMMAIPIYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELLLVTVAIVCLAVVQKAAAEWGGVYEQRWVGNNISIFIAAVLFGISIVDPLRRLAMDPLAATKRNYADRVLLSRTAPDSTVRTASGVSSGRSRDPSRIRANSEEEARLEEGDLGGVLDKDETTTAGDVSNVVASAVVGNGVITTSTADTNDAV-----AAGTWNEREPINTSVFTKQSSSVSNDTSIGGNRRDVVQRGPRERAFFRGRRGGGGGRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQTMMDSPPLPAGVAAA 529
BLAST of mRNA_C-linearis_contig11.1224.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE) HSP 1 Score: 528 bits (1360), Expect = 1.330e-170 Identity = 308/585 (52.65%), Postives = 393/585 (67.18%), Query Frame = 2
Query: 227 DFDPSSFIPTYTPTDKALALFRLTFAASLFVLGSYALVCFYRSRWVLDIRTRSAYLVMLEGVCVLLTMLVSMNGSANVVWGKGTDWLYNSLVLFFITPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYMTVLLIGSLGMLAIPLYDEYNLPIWEIIPKQTSVLAWVSIAFSVVLACLYPFIRKVDDLFNISKELIAVTVVIMLLSIGQKVIRDYAGVYVQRWLGDNLSIFCAACLFGISVVDPLRRLAFDPLAATKQNYADRVLLARSQPRSTAKTSLGLSSGIGNDS-------EDEARLEQGSSSIRLATRGVKSDGNGSVSSSTGLGNSGVDPSNSSASIFVATDSVDATAA-------------TSASSTAIDHYENSQRAGANG------GERENGXXXXXXXXXXXXXDGEAVELWDFERLGRTPLLAAAFEDFSRRALCHESVLFLSEVSLYQNGDFG-----SSSTSPPSQFSMFCYITDTFIKAGSIEEVNISDADKKQIIDLYHRGEATFEAVHEEERRLVFMQAYVEVRQMLEANLLRRFLMTDQFKNVRMRRENLQAMMDSPQ-QAGVA 1885
D + SS P+YT TDKALAL RL VLG+ ALV FYRS+W+LDIRTRSAYLVM+ GV +LTMLV++N S VVW G DW + SL+LFFI+PALFGSYICRALRLAVVFHP+ KRALPWLIPE NYM VLL+ S+GMLAIP+Y EY L +W+ I KQT++L + +V LAC+YPFIR VDDLF+IS ELI VT I+L++ ++V + G Y +RW +N+S+ LFG+S++ PLRRLA DPLAAT+ NYA+RVL R++P STA+ + G SSG+ +S EDE LE+G LAT ++ G G++G ++++ V T S DA A +S +TA N AG N G+ E G + +++WDFER+ RTPLLA AFED+S++ALCHES LFLSEVS YQNGD+ SS +S P+QF FCYITDTFIKAGS EEVNISD ++K I+ LYH+GE FE V+EEERR++F +AY+ V++MLEANLL RFL TD+FK+V M++E+ Q M+DSP QAGVA
Sbjct: 35 DLNLSSLAPSYTRTDKALALVRLGVGCCFIVLGTCALVRFYRSKWILDIRTRSAYLVMVGGVAGILTMLVTVNDSTTVVWDIGFDWFWISLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLIPEHNYMVVLLVASVGMLAIPIYHEYTLGVWDAISKQTNILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIVLIT-SEEVDGQWWGPYERRWFANNMSVVFMIILFGVSIIAPLRRLASDPLAATRHNYANRVLPNRTEPHSTARRASGFSSGLDCESSMMCSEREDETTLEEGKLGEALATGITTTEREG--------GSAGYVAASATIGKAVTTSSADANGAVAPHTWTDREPTNSSVVTTATWFVSNDNGAGGNRLDGVRRGQSEIGLDRGRDGGRRSRSHKQDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMATRASSGSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNEEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSVEMQKEDTQVMVDSPHLQAGVA 610
BLAST of mRNA_C-linearis_contig11.1224.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI) HSP 1 Score: 489 bits (1260), Expect = 2.390e-157 Identity = 283/571 (49.56%), Postives = 355/571 (62.17%), Query Frame = 2
Query: 185 TYYENKFGGNGGGEDFDPSSFIPTYTPTDKALALFRLTFAASLFVLGSYALVCFYRSRWVLDIRTRSAYLVMLEGVCVLLTMLVSMNGSANVVWGKGTDWLYNSLVLFFITPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYMTVLLIGSLGMLAIPLYDEYNLPIWEIIPKQTSVLAWVSIAFSVVLACLYPFIRKVDDLFNISKELIAVTVVIMLLSIGQKVIRDYAGVYVQRWLGDNLSIFCAACLFGISVVDPLRRLAFDPLAATKQNYADRVLLARSQPRSTAKTSLGLSSGIGNDSEDEARLEQGSSSIRLATRGVKSDGNGSVSSSTGLGNSGVDPSNSSASIFVATDSVDATAATSASSTAIDHYENSQRAGANGGERENGXXXXXXXXXXXXXDGEAVELWDFERLGRTPLLAAAFEDFSRRALCHESVLFLSEVSLYQNGDFG-----SSSTSPPSQFSMFCYITDTFIKAGSIEEVNISDADKKQIIDLYHRGEATFEAVHEEERRLVFMQAYVEVRQMLEANLLRRFLMTDQFKNVRMRRENLQAMMDSPQQAGV 1882
T +E +G G D D SS +P+YT TDKALALFRL VLG+ AL FYR + +LDIRTRSAYLVM+ GV +LTMLV++N + V+W G DW + SL LFFI+PALFG YICRALRLAVVFHP+ KRALPWLIPERNYM VLL+ S+GMLAIP+Y E+ L +W+ I KQT++L + +V LAC+YPFIR VDDLF+IS ELI VT I L++I Q++ + G Y +RWL +NLS+ LFG+S+V PLRRLA DP AAT++NYA+RVL ++P S IG + D R Q E G +GG R + ++LWDFER+ RTPLLA AFED+S+RALCHES LFLSEVS YQNGD+ SS +S P+QF FCYITDTFIKAGS EEVNISD ++K I+ LYH+GE FE V++ ERR++F +AY+ V++MLEANLL RFL TD+FK++ M++EN Q M+DSP QA V
Sbjct: 23 TSWEQHYGD--GDIDLDLSSLVPSYTRTDKALALFRLGVGCCFIVLGTCALARFYRLKQILDIRTRSAYLVMVGGVAGILTMLVTVNDATTVIWDTGFDWFWTSLFLFFISPALFGRYICRALRLAVVFHPRVKRALPWLIPERNYMVVLLVASVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIGLITIVQEIDGLWGGCYERRWLANNLSVLFMIVLFGVSIVAPLRRLASDPFAATRRNYANRVLPDHTEPHS-----------IGGNRLDAVRRGQS--------------------------------------------------------------ERGDDRGRDGGRRSRSHK-------------QDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPPQARV 505
BLAST of mRNA_C-linearis_contig11.1224.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 437 bits (1123), Expect = 1.040e-136 Identity = 285/533 (53.47%), Postives = 364/533 (68.29%), Query Frame = 2
Query: 380 RSAYLVMLEGVCVLLTMLVSMNGSANVVWGKGTDWLYNSLVLFFITPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYMTVLLIGSLGMLAIPLYDEYNLPIWEIIPKQTSVLAWVSIAFSVVLACLYPFIRKVDDLFNISKELIAVTVVIMLLSIGQKVIRDYAGVYVQRWLGDNLSI--------FCAACLFGISVVDPLRRLAFDPLAATKQNYADRVLLARSQPRSTAKTS------LGLSSGIGNDSEDEARLEQGSSS-----IRLATRGVKSDGNGSVSSSTGLGNSGVDPSNSSASIFVATDSVDATAATSAS-STAIDHYENS---QRAGANGGERENGXXXXXXXXXXXXX-DGEAVELWDFERLGRTPLLAAAFEDFSRRALCHESVLFLSEVSLYQNGDFGSSSTSP----PSQFSMFCYITDTFIKAGSIEEVNISDADKKQIIDLYHRGEATFEAVHEEERRLVFMQAYVEVRQMLEANLLRRFLMTDQFKNVRMRRENLQAMMDSPQ-QAGVAAV 1891
RSA+LV L+GV +L +MLV++N + +VW G DW + SL+LFF++PALFGSYICRALRLAVVF+P+AKRALPWLIPERNY+ VLL+ S+G+LAIP+Y EY L +W+ IPKQTS+L + +V+L C+YPFIR VDDLFNISKELI VTV I +++ + +V+ L ++ + L SVV PLRRLA DPLAATK+NYADRVLL+R++ ST S G SS I +DSEDE E A GV G V++S +G+ + S++ A+ VA T A+ ST++ +S +R G+R GXXXXXXXXXXXXX D E +E+WDFERLGRTPLLAAAFED+S+RALCHESVLFLSEVS YQN D+ + + + P+QF FC+ITDTFIKAG+ EEVNI +K I++LY +GE +FE V+EEERR+VF ++Y+ V+ MLEANLLRRFL TDQFK+VR +REN+QAMMDSP AGV A
Sbjct: 19 RSAHLVTLQGVSLLFSMLVTVNDATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKRALPWLIPERNYLAVLLLASIGILAIPIYQEYTLEVWDAIPKQTSILKTQARVLAVMLVCIYPFIRNVDDLFNISKELITVTVTIAVVTCEAHSF-VHRSTHVESCLQQHVPPTTKRFPYPMSPSNLSTRSVVAPLRRLALDPLAATKRNYADRVLLSRTESHSTRSASGISPERAGGSSRIVDDSEDEVAFEDEELGGVPGFDTTAAAGVGGGSTGKVATSAVVGSGVITTSSADANGAVAPCPWKGRELTIANGSTSVPKGSSSTGKRRDAVQRGQRGRGXXXXXXXXXXXXXSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSPPLPAGVVAA 546
BLAST of mRNA_C-linearis_contig11.1224.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI) HSP 1 Score: 383 bits (984), Expect = 1.400e-117 Identity = 243/521 (46.64%), Postives = 313/521 (60.08%), Query Frame = 2
Query: 380 RSAYLVMLEGVCVLLTMLVSMNGSANVVWGKGTDWLYNSLVLFFITPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYMTVLLIGSLGMLAIPLYDEYNLPIWEIIPKQTSVLAWVSIAFSVVLACLYPFIRKVDDLFNISKELIAVTVVIMLLSIGQKVIRDYAGVYVQRWLGDNLSIFCAACLFGISVVDPLRRLAFDPLAATKQNYADRVLLARSQPRSTAKTSLGLSSGIGN-------DSEDEARLEQGSSSI---RLATRGVKSDGN-GSVSSSTGLGNSGVDPSNSSASIFVA---------TDSVDATAATSASSTAIDHYENSQRAGANGGERENGXXXXXXXXXXXXXDGEAVELWDFERLGRTPLLAAAFEDFSRRALCHESVLFLSEVSLYQNGDF-----GSSSTSPPSQFSMFCYITDTFIKAGSIEEVNISDADKKQIIDLYHRGEATFEAVHEEERRLVFMQAYVEVRQMLEANLLRRFLMTDQFKNVRMRRENLQAMMDSP 1867
RSAYLVM+EGVC LLTMLV++N S NVVW G D+ + SL+LF + P L GSYICR LRLAVVFHP+AKRALPWLIP G Y + +L AF+V LAC +PFIR VDDLF+ISKE+I VT +++L+I Q V+ + GVY +RW+ ++SI A LFG+S+VDPLRRLAFDPLAAT+ N+A+R+LL+R++P ++ + LG SS IG DSE+EARLE+G + T DG+ G V +S +G + A VA T+S + A +SS + D+ +R +R G D E +E+WDFER+ TPLLAAAFED+S+RALCHESVLFLSEVS YQN ++ SS++SP QF FCYITDTFIKAGS EEVNI R++F +AY +V+ MLEANL+ RFL TD+FKNVR++REN++AMM SP
Sbjct: 3 RSAYLVMVEGVCALLTMLVTLNSSINVVWDCGLDYFWVSLLLFLVVPTLLGSYICRVLRLAVVFHPRAKRALPWLIPG------------GRSDAGYYPDDDLS-----------------AFAVALACTFPFIRNVDDLFSISKEIIIVTAAVVILAIEQNVVDKWGGVYERRWIDKSVSILFVAVLFGVSIVDPLRRLAFDPLAATQHNHANRILLSRTEPHNSVRRELGFSSVIGGGSQRTRGDSEEEARLEEGQREGVPGKDTTTAAGGDGDTGDVPTSAAIGRGATTAPTADADGAVAPCTWNEREPTNS--SVVAEGSSSVSNDNSTRGRRGAFQRVQRARGSGRDRGCSSRSRSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNI---------------------------RMIFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMGSP 465
BLAST of mRNA_C-linearis_contig11.1224.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI) HSP 1 Score: 358 bits (920), Expect = 8.140e-110 Identity = 219/500 (43.80%), Postives = 277/500 (55.40%), Query Frame = 2
Query: 398 MLEGVCVLLTMLVSMNGSANVVWGKGTDWLYNSLVLFFITPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYMTVLLIGSLGMLAIPLYDEYNLPIWEIIPKQTSVLAWVSIAFSVVLACLYPFIRKVDDLFNISKELIAVTVVIMLLSIGQKVIRDYAGVYVQRWLGDNLSIFCAACLFGISVVDPLRRLAFDPLAATKQNYADRVLLARSQPRSTAKTSLGLSSGIGNDSEDEARLEQGSSSIRLATRGVKSDGNGSVSSSTGLGNSGVDPSNSSASIFVATDSVDATAATSASSTAIDHYENSQRAGANGGERENGXXXXXXXXXXXXXDGEAVELWDFERLGRTPLLAAAFEDFSRRALCHESVLFLSEVSLYQNGDFG-----SSSTSPPSQFSMFCYITDTFIKAGSIEEVNISDADKKQIIDLYHRGEATFEAVHEEERRLVFMQAYVEVRQMLEANLLRRFLMTDQFKNVRMRRENLQAMMDSPQQAGV 1882
M+ GV +LTMLV++N + V+W G DW + SL+LFFI+PALFGSYICRALRLAVVFHP+ KRALPWL+PERNYM VLL+ S+GMLAIP+Y E+ L +W+ I KQT++L + +V LAC+YPFIR VDDLF+IS ELI VT I L++ T++NYA+RVL ++P S IG + D R Q E G +GG R + ++LWDFER+ RTPLLA AFED+S+RALCHES LFLSEVS YQNGD+ SS +S P+QF FCYITDTFIKAGS EEVNISD ++K I+ LYH+GE FE V+ EERR++F +AY+ V++MLEANLL RFL TD+FK++ M++EN Q M+DSP QA V
Sbjct: 1 MVGGVAGILTMLVTVNDATTVIWDTGFDWFWTSLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLVPERNYMVVLLVSSVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIGLIT------------------------------------------------TTRRNYANRVLPDHTEPHS-----------IGGNRLDAVRRGQ--------------------------------------------------------------TERGDDRGRDGGRRSRSHK-------------QDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASSGSSFPTQFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNVEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPPQARV 366
BLAST of mRNA_C-linearis_contig11.1224.1 vs. uniprot
Match: D8LJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ7_ECTSI) HSP 1 Score: 308 bits (789), Expect = 2.010e-93 Identity = 146/204 (71.57%), Postives = 174/204 (85.29%), Query Frame = 2
Query: 428 MLVSMNGSANVVWGKGTDWLYNSLVLFFITPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYMTVLLIGSLGMLAIPLYDEYNLPIWEIIPKQTSVLAWVSIAFSVVLACLYPFIRKVDDLFNISKELIAVTVVIMLLSIGQKVIRDYAGVYVQRWLGDNLSIFCAACLFGISVVDPLRRLAFDPLAATKQNYADRVLLAR 1039
ML ++NG+ N+VW G DW + SL+LFF++PALFGSYICRALRLAVVFHPKAKRALPWLIPERNY+ VL++ S GMLAIPLY EY L +WEIIPKQT +L WVSIAF+VV AC+YPFIR VDDLF+ISKEL VT ++LL++GQK+ DY GVY +RWLG+NL + AA +F +SVVDPLRRLAFDPLAATK+NYADRVLL+R
Sbjct: 1 MLAAVNGAINIVWDSGLDWFWVSLLLFFVSPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYVAVLMVASCGMLAIPLYHEYTLEVWEIIPKQTDILIWVSIAFAVVQACIYPFIRNVDDLFSISKELAIVTAAVILLAVGQKLEGDYGGVYERRWLGNNLFLLFAAVVFSVSVVDPLRRLAFDPLAATKRNYADRVLLSR 204
BLAST of mRNA_C-linearis_contig11.1224.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE) HSP 1 Score: 308 bits (788), Expect = 1.270e-89 Identity = 217/523 (41.49%), Postives = 298/523 (56.98%), Query Frame = 2
Query: 401 LEGVCVLLTMLVSMNGSANVVWGK--GTDWLYNSLVLFFITPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYMTVLLIGSLGMLAIPLYDEYNLPIWEIIPKQTSVLAWVSIAFSVVLACLYPFIRKVDDLFNISKELIAVTVVIMLLSIGQKVIRDYAGVY--VQRWLGDNLSIFCAACLFGISVVDPLRRLAFDPLAATKQNYADRVLLARSQPRSTAKTSLGLSSGIGNDSEDEARLEQGSSSIRLATRGVKSDGNGSVSSSTGLGNSGVDPSNS----------------------SASIFVATDSVDATAATSASSTAIDH--YENSQRAGANGGERENGXXXXXXXXXXXXXDGEAVELWDFERLGRTPLLAAAFEDFSRRALCHESVLFLSEVSLYQNGDFGS-SSTSPPSQFSMFCYITDTFIKAGSIEEVNISDADKKQIIDLYHRGEATFEAVHEEERRLVFMQAYVEVRQMLEANLLRRFLMTDQFKNVR-----MRRENLQAMMDSP 1867
+ G ++++ + ++N S ++WG DW + SL+LF + P +FGSYICRALRLAV+FHP+AK+ALPWLIPERN++ L + L +P+Y + L +W KVDDLFNIS+ELI VT++ ++L+IG K G+Y V W G NL+ F A +FG+SVV PLR LA DPLA +KQ DR +LAR RS + ++ A + S ++R+A+R ++ GL GVD ++ + S++ + + + S + Y+ + GG XXXXXXXXXXXXX E VE WDFERL R PL+AAAFE ++R+ALCHE VLFL EVS YQ+GDF + S PSQ+ FC I D FI+ GS EEV+IS ++K++++L H+G+ FEA EEERRLVF +AY+EV+ MLE NLLRRFL TD+FK+VR M+REN + SP
Sbjct: 1 MAGSSMVVSYVAAVNQSLFILWGATYSLDWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSATVVAFLIVPIYQDMTLEVW-----------------------------KVDDLFNISRELIIVTILFLILAIGIK-----CGLYYEVDMWTGGNLNFFITAAVFGVSVVGPLRLLAVDPLAGSKQRCMDRAVLARRDTRSE---------DVSYSAKATADIRGSSRAVRVASRKLEE----------GLYGDGVDENDDDGCDTTPXXXXXXXXXXXXXXXATSLYDEPPPANLSPSPSPGDPGAGNWQYQGINFCTSRGGGAGXXXXXXXXXXXXXXXXEEMVEAWDFERLARKPLVAAAFEAYTRKALCHECVLFLREVSRYQSGDFPEPAGLSGPSQYQAFCRINDVFIRPGSREEVSISGVERKRLMELAHKGDVLFEAGTEEERRLVFARAYLEVKTMLEDNLLRRFLQTDRFKSVRAQRRMMQRENFPTVAASP 470
BLAST of mRNA_C-linearis_contig11.1224.1 vs. uniprot
Match: A0A6H5LA03_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA03_9PHAE) HSP 1 Score: 284 bits (726), Expect = 2.890e-79 Identity = 235/589 (39.90%), Postives = 289/589 (49.07%), Query Frame = 2
Query: 380 RSAYLVMLEGVCVLLTMLVSMNGSANVVWGKGTDWLYNSLVLFFITPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYMTVLLIGSLGMLAIPLYDEYNLPIWEIIPKQTSVLAWVSIAFSVVLACLYPFIRKVDDLFNISKELIAVTVVIMLLS----------------------------------------------------------------------------IGQKVIRDYAGVYVQRWLGDNLSIFCAACLFGISV-VDPLRRLAFDPLAATKQNYADRVLLARSQPRSTAKTSLGLSSGIGNDSEDEARLEQGSSSIRLATRGVKSDGNGSVSSSTGLGNSGVDPSNSSASIFVATDSVDATAATSASSTAIDHYENSQRAGANGGERENGXXXXXXXXXXXXXDGEAV-ELWDFERLGRTPLLAAAFEDFSRRALCHESVLFLSEVSLYQNGDFG-----SSSTSPPSQFSMFCYITDTFIKAGSIEEVNISDADKKQIIDLYHRGEATFEAVHEEERRLVFMQAYVEVRQMLEANLLRRFLMTDQFKNVRMRRENLQAMMDSPQ--QAGVAAV 1891
RSA+L ML GV V+L ML ++NG+ N+VW G DW + SL+LFF++PALFGS ICRALRLAVVFH +AKRALPWLIP T +L W SIAF+VV AC+YPFIR VDDLF+ISKEL VT +LL+ +GQK+ D GV +RWLG+NL +F AA +F + +D + + A R ++ A G+++ G+D + G RG+ + G S+SS + GN D + QR G +G XXXXXXXXXXXX G V E+W FERL RTPLLA AFED+S+RALCHESVLFLSEVS YQN D+ SS +S P+QF CYITDTF KAGS EEVN SDADKK I + F AY++V+ MLEANLLRRFL TD+FK+VRM+REN+QAMMDSP AGV AV
Sbjct: 133 RSAHLAMLGGVAVILWMLTAVNGALNIVWDSGLDWFWISLLLFFVSPALFGSCICRALRLAVVFHSRAKRALPWLIP-----------------------------------TDILIWESIAFAVVQACIYPFIRNVDDLFSISKELAIVTAATILLAGGPRMPDSAAALAPLDEYQYPAVGASSRASALTSRFARTPTTLHPSVLNPPPPVGTPSPPSPLHAALVLDALAAPPVGQKLEGDCGGVNERRWLGNNLFLFFAAVVFSVECGIDDXXXXXXXXML---EEGAPRGNGRKNPAIVPADDDTGMAAVTGDD-DGATAAXXGXXXXAAPARGL-ARGISSLSSHSTGGNR------------------------------RDALQRGQRNSTCG----HGGXXXXXXXXXXXXXGRGVMEVWSFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSWYQNDDYATQTRASSGSSCPTQFGTLCYITDTFTKAGSPEEVNTSDADKKAIFEND------------------FSLAYLKVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPVLPAGVGAV 629 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1224.1 >prot_C-linearis_contig11.1224.1 ID=prot_C-linearis_contig11.1224.1|Name=mRNA_C-linearis_contig11.1224.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=597bp MSGGPPSSIDIGDGYGDGDSASPSSSLTYYENKFGGNGGGEDFDPSSFIPback to top mRNA from alignment at C-linearis_contig11:1202641..1216936+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1224.1 ID=mRNA_C-linearis_contig11.1224.1|Name=mRNA_C-linearis_contig11.1224.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=14296bp|location=Sequence derived from alignment at C-linearis_contig11:1202641..1216936+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:1202641..1216936+ >mRNA_C-linearis_contig11.1224.1 ID=mRNA_C-linearis_contig11.1224.1|Name=mRNA_C-linearis_contig11.1224.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3582bp|location=Sequence derived from alignment at C-linearis_contig11:1202641..1216936+ (Chordaria linearis ClinC8C monoicous)back to top |