mRNA_C-linearis_contig11.1219.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1219.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI) HSP 1 Score: 519 bits (1336), Expect = 8.030e-148 Identity = 316/615 (51.38%), Postives = 406/615 (66.02%), Query Frame = 3
Query: 981 TASFRQPSATLAFVLISQVQFLATLSLVDNMGAEDSTLSGFADNLSWINLWPSASFAESFTPGSEPRMQRSLLSDELEPEGGEGGVDGD--------------VESSSSDDDSSAVFMGNLTLFVALLSSIFLVHVALASAIEAYWLAKKRAKEQIEGARFEGIPLSQLSRRPSARQIQHDPDA---RPPSTSLVIPPPHVIPSPSNVEGGHPRFRRRSSSWVNVNKVMECREKSQSAWLHFPHVELVFLLFAFEGAVAAQVSALVGDTSPVVFSLALACLLLYPVLMIVMVSRTFASKVRATDYIVFKPNAEDDTNESRSGFFSSTRSFVAKVGTSLKEDHSMFAWADKGQWESVETDDREVQRKRDWFRIGFEPIFVDFTGKGAWFVVYSLIEWAALGVVGAVIEESVLQLSLFCAMHMVSFLLLAVLKPFANRAINALGIALYGIDAACMAVLAVSADKWEGTSRAEEVDSAVMTVQLITLAAIIIPIYVDTSFVMIGALSQKLRKTNKSDAKMDEEERIFMKRYIRRAWARMWCTMLRKNIFACFRDTVAGVNAKSWAPAS-------AAAAPSGPYPPLGPIEDVDGPEGFQPRRPGGNSVGTANTPVVV 2753
++S R+PS T+A V + Q+QFLATLSLV N G EDS L FA+NL WINLWP ASFA SFTP S + EL+ EG + VE+ S D SS VF+GNL LF+ +L IFL+H+ +AS IEAYWLAK+ A++ + A+ G+P+ +LS R S DP++ R T+ ++ E G P RS ++K+ ECRE+SQS WLHFPHVEL++LLFAFEGAVAAQVSA+ + + +V LA+ LL +PVLM V TF K+R+ +IVF PNA DD E+ S ++S RSF +KV LKE +SMFAW++KG+WESV+T D E +R RDWFRIGFEP+FVDFTG G+WF VY+LIE A VVG V++ SVLQLSLF A + VSFLLL VLKPFAN IN +G A+YGIDAACMAVLAV+ADKW GT RA +VDS V+ VQL+TLAAIIIP+YVDT+F+M+G++ KLR + D +D +ER +++RYI AWA ++CTM+RKN+ A ++T AG + AS AA +GPYPPL D D P F PRRP +GT +TP+VV
Sbjct: 2178 SSSIRRPSTTMAIVALGQLQFLATLSLVGNTGTEDSKLYDFANNLRWINLWPPASFARSFTPAS--------MYGELDQEGEDAXXXXXXXXXXXXXXXXXEGVENEESGDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSARLSNPWAPFDPNSESQRSLRTAKTSGDDEGEADDTDAEEGMPETVGRSK----LSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNA-DDAVEAESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFANGIINFMGAAVYGIDAACMAVLAVTADKWGGTERASQVDSVVVIVQLLTLAAIIIPLYVDTAFMMVGSIRDKLRGVREDDH-IDADERKYIRRYIWGAWAPIFCTMIRKNVLAFLKETSAGYSPSVKVSASHVRALSTTTAARTGPYPPLDTF-DFDKPTEFDPRRP--RELGTVDTPIVV 2775
BLAST of mRNA_C-linearis_contig11.1219.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 454 bits (1169), Expect = 2.050e-128 Identity = 282/620 (45.48%), Postives = 377/620 (60.81%), Query Frame = 3
Query: 984 ASFRQPSATLAFVLISQVQFLATLSLVDNMGAEDSTLSGFADNLSWINLWPSASFAESFTPGSEPRMQRSLLSDELEPEGGEGGVDGDVESSSSDDDSSAVFMGNLTLFVALLSSIFLVHVALASAIEAYWLAKKRAKEQIEGARFEGIPLSQLSRRPSARQI--QHDPDARPPST-SLVIPPPHVIPSP---------SNVEGGHPRFRRRSSSWVNVNKVMECREKSQSAWLHFPHVELVFLLFAFEGAVAAQVSALVGDTSPVVFSLALACLLLYPVLMIVMVSRTFASKVRATDYIVFKPNAEDDTN---ESRSGFFSSTRSFVAKVGTSLKEDHSMFAWADKGQWESVETDDREVQRKRDWFRIGFEPIFVDFTGKGAWFVVYSLIEWAALGVVGAVIEESVLQLSLFCAMHMVSFLLLAVLKPFANRAINALGIALYGIDAACMAVLAVSADKWEGTSRAEEVDSAVMTVQLITLAAIIIPIYVDTSFVMIGALSQKLRKT-NKSDAKMDEEERI---FMKRYIRRAWARMWCTMLRKNIFACFRDTVAGVNAKSWAPASAAAAPSGPYPPLGPIEDVDGPE--GFQPRRPGGNSVGTANTPVVVLPPRSEAIG 2780
AS R+PSATLAFVL++Q+QFLATLSLVD + EDS L+ F L WINLW A + +++ SDE E G G+ + VF+GNL L + +L +IF +HVA S +EA WL KKRA+E ++ AR G P+ +L R +I + +PD PS + P P PS EGG RS + ++ V CRE S SAWLHFPHVELVFL FAFEGAVA+ SA+ P +F A+A ++LYP+LM V V RT +VR ++FK AED TN SR+G +++ +S E++S+F+WADKGQWE+V+T DR+V R+ DWFRIGFEP+FVD+T +G WF+V SL+EWAA VG +IE SV+QL LFC +H V F +L LKPFAN IN + + IDA M V A SA WEGT+RA ++++V+ +QL++L A++IP+Y+D +++GA+ ++RK K+ ++ +EER +++ Y RR W WCTMLR N+FAC RDT GV P AA SGPYPPL + G E G PRRP N+VGTANTPV+V+ R EA G
Sbjct: 1187 ASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPA------------EVGQNIASDECAFEAGASGI------------GALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLHEEESDMSDEEEGGRGLVPMRSEN--RLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAG------GLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGKTGHELTDEEREARHYIRSYTRRQWCGTWCTMLRHNVFACARDTSEGVRK----PRFTTAARSGPYPPLDRSKQAGGTEDGGGPPRRPSCNAVGTANTPVIVISDRKEAAG 1770
BLAST of mRNA_C-linearis_contig11.1219.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 448 bits (1152), Expect = 2.780e-128 Identity = 281/634 (44.32%), Postives = 367/634 (57.89%), Query Frame = 3
Query: 1005 ATLAFVLISQVQFLATLSLVDNMGAEDSTLSGFADNLSWINLWPSASFAESFTPGSEPRMQRSLLSDELEPEGGEGGVDGDVESSSSDDDSSAVFMGNLTLFVALLSSIFLVHVALASAIEAYWLAKKRAKEQIEGARFEGIPLSQLSRRPSARQIQHD------PDARPPSTSLVIP------------PPHVIPSPSN-----------VEGGHPRFRRRSSSWV---------------------------------------NVNKVMECREKSQSAWLHFPHVELVFLLFAFEGAVAAQVSALVGDTSPVVFSLALACLLLYPVLMIVMVSRTFASKVRATDYIVFKPN-AEDDTNES---RSGFFSSTRSFVAKVGTSLKEDHSMFAWADKGQWESVETDDREVQRKRDWFRIGFEPIFVDFTGKGAWFVVYSLIEWAALGVVGAVIEESVLQLSLFCAMHMVSFLLLAVLKPFANRAINALGIALYGIDAACMAVLAVSADKWEGTSRAEEVDSAVMTVQLITLAAIIIPIYVDTSFVMIGALSQKLRKTNKSD-----AKMDEEERIFMKRYIRRAWARMWCTMLRKNIFACFRDTVAGVNAKSW-------APASAAAAPSGPYP 2654
A L V ++Q+QFLATLSLVD+ G EDS+L GFAD+ W NLWP ASFAE F S+ QR L DG + S VF+GN L L IFL+HV+L S +EAYWLAKKRAKE+ AR G+ + + +H+ PDARP + I P ++ + + ++ H + R SWV ++ V ECRE S+SAWLHFPHVELVFL FA+EGAVA+QVSAL P V A L+ YP+LM V V RTF +VR IVF P A+DDT ++ G + + SF++KV +EDHS+FAWA+KG WE+ ETD+ +R+ WFRIGFEP+FVDFT GAWFV ++L+EWAALG +GA+I+ESVLQLSLFCA+H +SFLLL V +PFAN INA+G L GIDA CMA+LAVSA +WEGT+ A +VDS VM +QL L A+IIPIY+DTS ++IGA+ +L+K+ + + ++EE +F++ +IRR+W R WCTML KNIFAC DT G+ A ++A AA +GP+P
Sbjct: 758 AILGAVAVTQLQFLATLSLVDDTGGEDSSLPGFADSFRWANLWPPASFAEEFIDTSDEGQQRRLXXXXXXXXXXGCSWDGSLGGLGS-----LVFIGNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKEEAARARRLGVSIGEYFSDTHVDGREHEQAPVPEPDARPSGGTTDISVASSFRRRRLRRDPSLLNAAATGSQRRLEKLPALDAPHRSRKVRDGSWVAEDGEKKEARSDDNLSGTDCSDYDEEGGGGLGTLTRAESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTTPQHVRTEAEKEEDLFVRHFIRRSWPRTWCTMLGKNIFACASDTREGIRPPGTSMAEDRLATSTARAARTGPFP 1386
BLAST of mRNA_C-linearis_contig11.1219.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 420 bits (1080), Expect = 1.930e-126 Identity = 251/564 (44.50%), Postives = 345/564 (61.17%), Query Frame = 3
Query: 987 SFRQPSATLAFVLISQVQFLATLSLVDNMGAEDSTLSGFADNLSWINLWPSASFAESFTPGSEPRMQRSLLSDELEPEGGEGGVDGDVESSSSDDDSSAVFMGNLTLFVALLSSIFLVHVALASAIEAYWLAKKRAKEQIEGARFEGIPLSQLSRRPSARQIQHDPDARPPSTSLVIPPPHVIPSPSNVEGGHPRFRRRSSSWVNVN-------------------KVMECREKSQSAWLHFPHVELVFLLFAFEGAVAAQVSALVGDTSPVVFSLALACLLLYPVLMIVMVSRTFASKVRATDYIVFKPNAEDDTNESRSGFFSSTRSFVAKVGTSLKEDHSMFAWADKGQWESVETDDREVQRKRDWFRIGFEPIFVDFTGKGAWFVVYSLIEWAALGVVGAVIEESVLQLSLFCAMHMVSFLLLAVLKPFANRAINALGIALYGIDAACMAVLAVSADKWEGTSRAEEVDSAVMTVQLITLAAIIIPIYVDTSFVMIGALSQKLRKTNKS----DAKMDEE---ERIFMKRYIRRAWARMWCTMLRKNIFACFRDTVAGVN 2600
S R PS T+A +L++Q+QFLATLSLVD+ GAEDS LS NL W+NLWP S +F+ G E Q+ +G +E +S+ D + VF+GN+ LF +LL I ++H+ L SA+EAYWL+K+RA E++ A+ GIP+ L R ++R + H PDA L S SN +G R + S V+V + +CR +S S WL+FPH+EL+FLLFAFEGA+A+Q++ + G P VF A A L++YPVLMI++ RT +V IVFKP E++ N G RSF++KV T LKEDHSMFAWA+ G WE+VET D E R+ D FRIGFEP+FVDFT K +WF VY L+E + ++++SV+QL LFC +H +SFLLL + +PFAN IN +G L IDAA MA+LA +A +W+ TSRA+ +D+AV+ +QL+ L A+IIP+Y+D S V++GA+ +K+R KS D + +EE ER F++ YI RAW WC ML N+ AC DT G
Sbjct: 44 SVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGERLFQQ------------DGSRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGARRASR-VAHSPDAESDPDELAA-------SASN-DGAMSREHAAADS-VDVGVDFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEE-NHGTDGTV--PRSFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTCDDGRTEEEAKEERKFIRGYIFRAWGPTWCRMLGSNVLACVADTTRGTR 582
BLAST of mRNA_C-linearis_contig11.1219.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 429 bits (1104), Expect = 9.980e-119 Identity = 264/607 (43.49%), Postives = 357/607 (58.81%), Query Frame = 3
Query: 987 SFRQPSATLAFVLISQVQFLATLSLVDNMGAEDSTLSGFADNLSWINLWPSASFAESFTPGSEPRMQRSLLSDELEPEGGEGGVDGDVESSSSDDDSSAVFMGNLTLFVALLSSIFLVHVALASAIEAYWLAKKRAKEQIEGARFEGIPLSQLSRRPSARQIQHDPDARPPSTSLVIPPPHVIPSPSNVEGGHPRFRRRSS--------SWVNVNKVMECREKSQSAWLHFPHVELVFLLFAFEGAVAAQVSALVGDTSPVVFSLALACLLLYPVLMIVMVSRTFASKVRATDYIVFKPNAEDDTN----ESRSGFFSSTRSFVAKVGTSLKEDHSMFAWADKGQWESVETDDREVQRKRDWFRIGFEPIFVDFTGKGAWFVVYSLIEWAALGVVGAVIEESVLQLSLFCAMHMVSFLLLAVLKPFANRAINALGIALYGIDAACMAVLAVSADKWEGTSRAEEVDSAVMTVQLITLAAIIIPIYVDTSFVMIGALSQKLRK----TNKSDAKMDEEERIFMKRYIRRAWARMWCTMLRKNIFACFRDTVAGVNAKSWAPASAAAAPSGPYPPLGPIEDVDGPEGF--QPRRPGGNSVGTANTPVVV 2753
S R+PSATLAFVL++Q+QFLA LSLVD + ++ S L+ F L WINLW A E DG + + + + + VF+GNL L + +L +IF +HVA+ S EA WL KKRA+E ++GAR P+S+L R +I R + L P P +PS V G R S ++ V CRE S SAWLHFPHVELVFL FAFEGAVA+ SA+ P +F A+A ++LYP+LM V RT +VR + ++FK ED TN R GF S +S S E++S+F+WADKGQWE+V+T +R + R+ DWFRIGFEP+FVD+T +G WF+V SL+EWA++ +VG +I+ S +QL LFC + FL+L LKPFAN IN +G + IDA C +LAV+A KWEGTSRA +V+SAV +Q+++L A++IP+Y+D +++GA+ +++RK T + E R +++ + RR W WC MLR N+FAC RDT GV P AA SGPYPPL DG EG PRRP N++GT +TPVVV
Sbjct: 1417 SHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIAS------------------------DGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRI-----IRQTNPGLTDPSPFASRNPSLVRDGSQRTDEEEGGRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRGGFLSRFKS-------SWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLTGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTRDGVRK----PHLLTAARSGPYPPLDKSIGPDGTEGDGGPPRRPSFNAIGTVHTPVVV 1983
BLAST of mRNA_C-linearis_contig11.1219.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 421 bits (1082), Expect = 5.050e-116 Identity = 266/614 (43.32%), Postives = 362/614 (58.96%), Query Frame = 3
Query: 978 STASFRQPSATLAFVLISQVQFLATLSLVDNMGAEDSTLSGFADNLSWINLWPSASFAESFTPGSEPRMQRSLLSDELEPEGGEGGVDGDVESSSSDDDSSAVFMGNLTLFVALLSSIFLVHVALASAIEAYWLAKKRAKEQIEGARFEGIPLSQL-SRRPSARQIQHDPDARPPSTSLVIPPPHVIPSPSNV----------EGGHPRFRRRSSSWVNVNKVMECREKSQSAWLHFPHVELVFLLFAFEGAVAAQVSALVGDTSPVVFSLALACLLLYPVLMIVMVSRTFASKVRATDYIVFKPNAEDDTNES----RSGFFSSTRSFVAKVGTSLKEDHSMFAWADKGQWESVETDDREVQRKRDWFRIGFEPIFVDFTGKGAWFVVYSLIEWAALGVVGAVIEESVLQLSLFCAMHMVSFLLLAVLKPFANRAINALGIALYGIDAACMAVLAVSADKWEGTSRAEEVDSAVMTVQLITLAAIIIPIYVDTSFVMIGALSQKLRK----TNKSDAKMDEEE-RIFMKRYIRRAWARMWCTMLRKNIFACFRDTVAGVNAKSWAPASAAAAPSGPYPPLGPIEDVDGPEGF--QPRRPGGNSVGTANTPVVV 2753
S S R+PSATLAFVL++Q+QFLA LSLVD + ++ S L+ F L WINLW A E DG + + + + + VF+GNL L + +L +IF +HVA+ S EA WL KKRA+E ++GAR P+S+L +R R I+ + L P P +PS V EGG S + ++ V CRE S SAWLHFPHVELVFL FAFEGAVA+ SA+ P +F A+A ++LYP+LM V RT +VR + ++FK ED TN + R GF S +S S E++S+F+WADKGQWE+V+T +R + R+ DWFRIGFEP+FVD+T +G WF+V SL+EWA++ +VG +I+ S +QL LFC + FL+L LKPFAN IN +G + IDA +LAV+A KWEGTSRA +V+SAV +Q+++L A++IP+Y+D +++GA+ ++RK T + K + E R +++ + RR W WC MLR N+FAC RDT GV P AA SGPYPPL DG EG PRRP N++GT +TPVVV
Sbjct: 1373 SRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIVS------------------------DGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRT------NPGLTDPSPFGSRNPSLVRDRSQRTDEEEGGRGLVPMCSEN--QLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSHFKS-------SWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGKTGQQQLKGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTREGVRK----PHLLTAARSGPYPPLDKSIGPDGTEGDGGPPRRPSFNAIGTVHTPVVV 1943
BLAST of mRNA_C-linearis_contig11.1219.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 383 bits (983), Expect = 5.660e-112 Identity = 231/552 (41.85%), Postives = 333/552 (60.33%), Query Frame = 3
Query: 993 RQPSATLAFVLISQVQFLATLSLVDNMGAEDSTLSGFADNLSWINLWPSASFAESFTPGSEPRMQRSLLSDELE-PEGGEGGVDGDVESSSSDDDSSAVFMGNLTLFVALLSSIFLVHVALASAIEAYWLAKKRAKEQIEGARFEGIPLSQ----LSRRPSARQIQHDPDARPPSTSLVIPPPH------VIP-----SPSNVEGGHPRFRRRSSSWVNVNKVMECREKSQSAWLHFPHVELVFLLFAFEGAVAAQVSALVGDTSPVVFSLALACLLLYPVLMIVMVSRTFASKVRATDYIVFKPNAEDDTNESRSGFFSSTRSFVAKVGTSLKEDHSMFAWADKGQWESVETDDREVQRKRDWFRIGFEPIFVDFTGKGAWFVVYSLIEWAALGVVGAVIEESVLQLSLFCAMHMVSFLLLAVLKPFANRAINALGIALYGIDAACMAVLAVSADKWEGTSRAEEVDSAVMTVQLITLAAIIIPIYVDTSFVMIGALSQKLRKTNKSDAKMDEEERIFMKRYIRRAWARMWCTMLRKNIFACFRDTVAGVN 2600
R PSAT+AFVL SQ+QFLATLS VD GAE+S S +NL W+NLWPS SF+E + ++SDE + P + + + + + S +FMGNL LF LL IF HV +AS +EAYW+AK+RA++ I + G+ LS+ LS S + D + +S ++ P V P S S+ E G PR R +S + +V +CRE SQS WLH+PH+EL+FL FAFEGAV +Q++AL S + A+A L+LYP+LM+VMV+RT V+ IVF A +T E+ +G S +++ + LK D S+F+WADKGQWE+V+T + + +RK DWFRIGFEP+F DFT G+WF++Y+LIE A L + +++ S +Q LFCAMH ++F+LL KPFAN +NA+ + DA CM +LA++A + GT+ A +D+AVM +Q + +A ++IP+YVDT+ + G + + ++ + + D ER KR R W R W M+ N+FAC RDT G+
Sbjct: 142 RSPSATMAFVLTSQIQFLATLSFVDTTGAEESAFSDLTNNLRWVNLWPSESFSEG--------IASRIISDEPDQPSDEDDTTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSGTWSQQPTMDDGSSAGSQSSGIMQSPQRMERQAVSPYDGGDSKSDEEEGGPRNTRPGNS---IGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVF---ASSETEEALAG----KPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQALCIAVLVIPLYVDTAVSIYGMIRNRKGSVDERENEADRAEREVTKRLTLRLWGRAWFRMVFSNMFACLRDTREGIR 675
BLAST of mRNA_C-linearis_contig11.1219.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE) HSP 1 Score: 360 bits (924), Expect = 1.090e-103 Identity = 255/660 (38.64%), Postives = 347/660 (52.58%), Query Frame = 3
Query: 828 TTAAGTVSFLAFSGLVATTVSXXXXXXXXXXXSAARSSGQG------PTASTGGAIST---------------ASFRQPSATLAFVLISQVQFLATLSLVDNMGAEDSTLSGFADNLSWINLWPSASFAESFTPGSEPRMQRSLLSDELEPEGGEGGVDGDVESSSSDDDSSAVFMGNLTLFVALLSSIFLVHVALASAIEAYWLAKKRAKEQIEGARFEGIPLSQLSRRPSARQI--QHDPDARPPSTSLVIPPPHVIPSPSNV-----------EGGHPRFRRRSSSWVNVNKVMECREKSQSAWLHFPHVELVFLLFAFEGAVAAQVSALVGDTSPVVFSLALACLLLYPVLMIVMVSRTFASKVRATDYIVFKPNAEDDTN---ESRSGFFSSTRSFVAKVGTSLKEDHSMFAWADKGQWESVETDDREVQRKRDWFRIGFEPIFVDFTGKGAWFVVYSLIEWAALGVVGAVIEESVLQLSLFCAMHMVSFLLLAVLKPFANRAINALGIALYGIDAACMAVLAVSADKWEGTSRAEEVDSAVMTVQLITLAAIIIPIYVDTSFVMIGALSQKLRKTNKSDAKMDEEE--RIFMKRYIRRAWARMWCTMLRKNIFACFRDTVAGVNAKSWAPASAAAAPSGPYPPLGPIEDVDGPE 2690
TTAAG V+ LA G++ + SA+ SG G P A ++ AS R+PSATL FVL++Q+QFLATLSLVD + EDS L+ F L WINLW A + +++ SDE E G G+ + VF+GN+ L +L +IF +HVA S +EA WL KK A+E ++ AR G P+ +L R +I + +PD PS PH + S + EGG R RS + +N V CRE S SAWLHFPHVELVF FAFEGAVA+ SA+ P +F A+A ++L P+LM V V RT +VR ++FK AE T+ SR+G F+++ +S +E++S+F+WADK QWE+ +T DR++ R+ DW RIGFEP+FV++T +G WF+V SL+EW AL +VG ++E S++QL LFC + V FL+L LKPFAN N + + IDA M V A SA WEGT RA ++++V+ +QL++L DEE R +++ Y RR W WCT+L N+FAC RDT GV P AA SGPYPPL + G E
Sbjct: 134 TTAAGAVTILALIGILVISTGSVIRSNRGNDSSASCGSGSGDSFLGAPVAFRARSVDALAPADGTAERENPPPASNRRPSATLTFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWLA------------EVGQNIASDESAFEAGASGI------------RALVFVGNVALVKGILLAIFFIHVAAVSGVEALWLTKKPARENLDAARRRGAPIGELQARLRGVRIICRTNPDLADPSP-FSRQAPHASGTLSTLNEEESDMSDEEEGGRGRVPMRSEN--RLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIRNYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAEGGTSGDAPSRAG------GFLSRFKSSWEENYSLFSWADKRQWETAQTPDRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLILMFLKPFANSVTNNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSL--------------------------------FDEEREARDYIRSYTRRQWCGTWCTVLGHNVFACARDTSEGVRK----PRFTTAARSGPYPPLDRSKQAGGTE 724
BLAST of mRNA_C-linearis_contig11.1219.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 370 bits (951), Expect = 6.480e-101 Identity = 339/1023 (33.14%), Postives = 464/1023 (45.36%), Query Frame = 3
Query: 963 TGGAISTASFRQPSATLAFVLISQVQFLATLSLVDNMGAEDSTLSGFADNLSWINLWPSASFAESFTPGSEPRMQRSLLSDELEPEGGEGG---VDGD-----VESSSSDDDSSAVFMGNLTLFVALLSSIFLVHVALASAIEAYWLAKKRAKEQIEGARFEGIPLSQLSRRPSA-RQIQHDPDARPPSTSLVIPPPHVIPS--------PSNVEGGHPRFRRRSSSWVNVNKVMECREKSQSAWLHFPHVELVFLLFAFEGAVAAQVSALVGDTSPVVFSLALACLL--------LYPVLMIVMVSRTFASKVRATDYIVFKPNAEDDTNESRSGFFSSTRSFVAKVGTSLKEDHSMFAWADKGQWESVETDDREVQRKRDWFRIGFEPIFVDFTGKGAWFVVYSLIEWAALGVVGAVIEESVLQLSLFCAMHMVSFLLLAVLKPFANRAINALGIALYGIDAACMAVLAVSADKWEGTSRAEEVDSAVMTVQLITLAAIIIPIYVDTSFVMIGALSQKLRKTNKSDAKMDEEERIFMKRYIRRAWARMWCTMLRKNIFACFRDTVAGVNAKSWAPAS--AAAAPSGPYPPLGPIEDVDGPEGFQPRRPGGNSVGTANTPVVV-LPPRS----EAIGRNVDARGAMRTTPASTLTRR----PGSRAFPHSDGGERFTTPADTRTFTDLDPDAGYVERG-SSSDRGINLNYAQTQQETAYDEGKSETVGQGFFDPESHDAHPDGTSRTGGRY----SSLTEPMRHMQSG-----GIQSDDLPRRREYVVPTTRVDESGVGDEQNEHDIPAGQISTRRSEPGRGDGDRWGLKNRGPLASDLPRRRSGYSSVAWTRPMGGADIDRQSTSAQQHPTDHESASDGQEHGTCDPEPGDARLGGTSRTGSFPSHLAESMWHVLGGAVEHDLPRRRPTKYQMPGVEYAFAGGKRVGQEGGDEPGMDVSASQRIGEEKGVSGRFGLRSRVPITSEFPRRHSDRSAVASSANLIGGNDVTDTQSLPPCDELD 3893
TG A + ++FR PS+T+A VL SQ+QFLATLS VD+ G E S LSG NL W+NLWPS SF+E + +L +E EP GE DGD + + D S +FMGNL LF IF VH+ LASA+EAYWLAK+RA+ +I A + S S S R IQ S L+ +PS +NV+ R SS + +V ECRE SQSAWLH+PH+ELVFL FAFEGAV +QVSAL +S VF A+A L +L ++ +VR+ IVF N D+ + +S +S K+ T LK+D S+FAWADKG W +V+T D + +R DWFRIGFEP++ DFT G+WF VY+LIEWA L + +++ S +Q LFCA+H ++F+LL V KPFAN +N +G + DA CM +LA+SA + T+ A+ +D VM Q + +A +++P+YVDT ++ GA+ + D ER F+ R R W R W M+ N+FAC RDT G+ + + A GPYP S+ PV + LP R+ + G D A+ PAS R+ P +P + + + + G S SD N ++ + V DA P TG Y S++ RH G G+ DDLPRRR + + + D +E I + E +G R G + P D PRRR SV+ + D QS +H D E SD HG P+ G +R T R G VE LPRRR +P + ++ E G D+ A G G R G + + P R S SA + A + + SLP LD
Sbjct: 88 TGQAATQSTFRNPSSTMALVLTSQIQFLATLSFVDDTGVEGSALSGLTKNLRWVNLWPSQSFSEG--------VASWVLCNEPEPTSGEDDDSEEDGDSTQRGISWTVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRALGGDLSTSGSSTAWSGTRAIQ--------SPQLMEH--QALPSWDSTGRNDSTNVQEAARTNTRAGSS---IGQVSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSTVFYAAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTDEGSTGKSTLYS-------KMVTGLKKDSSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAAADRIDIVVMVAQHLCIAVLVVPLYVDTLLLVWGAIRNRRGPVKTRDNAAQRAEREFINRRTLRLWGRTWFNMVGSNVFACVRDTREGIRDPTGSRRQDRLRAGQIGPYPEW--------------------SLKNLRAPVPIDLPRRNFGGFDWYGGQDDDADAITDQPASGRRRKWKRGPAENDYPIRRSSYSLDSTIAAVSMEEAGQTSSPRSAGISGSDERSGSNENGPIEDNLSFRHSNILVPSAVVVDRRGDAGP----LTGREYVSHAQSISAKRRHGSHGRQCGAGLIEDDLPRRRIGLAAGPEI----LDDAVHEQGIDENEAGLEADEDVQGPRRRRGRRRGEPAGEDFPRRRPSVWSVSGFSVDHVDNTDLQSVP--EHDNDLEHFSD--VHG---PQNGQSR---TRR-----------------GPVEDSLPRRRFCSSSIP--MSSLDSSDEADRQPLPEYGNDLEAVVDDGSLHGWGHRQGRH----LEDDLPHRRSGYSAASGFARHLD-----EDLSLPAMHNLD 1016
BLAST of mRNA_C-linearis_contig11.1219.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE) HSP 1 Score: 314 bits (804), Expect = 1.080e-89 Identity = 183/377 (48.54%), Postives = 235/377 (62.33%), Query Frame = 3
Query: 1602 VNKVMECREKSQSAWLHFPHVELVFLLFAFEGAVAAQVSAL-VGDTSPVVFSLALACLLLYPVLMIVMVSRTFASKVRATDYIVFKPNAEDDTNESRSGFFSSTRSFVAKVGTSLKEDHSMFAWADKGQWESVETDDREVQRKRDWFRIGFEPIFVDFTGKGAWFVVYSLIE------------------WAALGVVGAVIEESVLQLSLFCAMHMVSFLLLAVLKPFANR--------------------AINALGIALYGIDAACMAVLAVSADKWEGTSRAEEVDSAVMTVQLITLAAIIIPIYVDTSFVMIGALSQKLRKTNKSD-----AKMDEEERIFMKRYIRRAWARMWCTMLRKNIFACFRDTVAGVN 2600
++ V ECRE SQ AWLHFPHVELVFL FA+EGAVA+QVSAL PV+ + LA L+ YP+LM V V RTF +VR IVF ++KV +EDHS+FAWA+KG WE+ ETD+ ++R+ WFRIGFEP+FVDFT GAWFV ++L+E WAALG +GA+I+ESVLQLSLFCA+H +SFLLL V +PFANR INA+G L GIDA CMA+LAVSA +WEGT A +VDSAVM +QL A+IIPIY+DTS ++I A+ +L+K + + ++ E +F++ +IRR+W R WCT+L KNIFAC DT G+
Sbjct: 161 LSSVAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAGCLPVMIAAGLA-LVFYPILMFVAVLRTFFVRVRPNTPIVF----------------------LSKVRAGWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANRLERKTQRVRFLDRLYFRAHSVINAMGAGLVGIDAVCMALLAVSASRWEGTVAAGKVDSAVMLLQLFARCALIIPIYIDTSLMLIEAIRSRLQKCTTTAPQHVRTEAEKVEDLFVRHFIRRSWPRTWCTILGKNIFACASDTSEGIR 514 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1219.1 >prot_C-linearis_contig11.1219.1 ID=prot_C-linearis_contig11.1219.1|Name=mRNA_C-linearis_contig11.1219.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=985bp MGAEDSTLSGFADNLSWINLWPSASFAESFTPGSEPRMQRSLLSDELEPEback to top mRNA from alignment at C-linearis_contig11:1108978..1124961+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1219.1 ID=mRNA_C-linearis_contig11.1219.1|Name=mRNA_C-linearis_contig11.1219.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15984bp|location=Sequence derived from alignment at C-linearis_contig11:1108978..1124961+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:1108978..1124961+ >mRNA_C-linearis_contig11.1219.1 ID=mRNA_C-linearis_contig11.1219.1|Name=mRNA_C-linearis_contig11.1219.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5910bp|location=Sequence derived from alignment at C-linearis_contig11:1108978..1124961+ (Chordaria linearis ClinC8C monoicous)back to top |