mRNA_C-linearis_contig11.1216.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig11.1216.1
Unique Name	mRNA_C-linearis_contig11.1216.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig11.1216.1 vs. uniprot
Match: A0A6H5K6S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6S9_9PHAE)

HSP 1 Score: 452 bits (1162), Expect = 7.190e-146
Identity = 305/529 (57.66%), Postives = 352/529 (66.54%), Query Frame = 1

Query:  160 MPRS---SSTPPN-TGRAGFVVGILLGKAGCPVQALMPSVASSFRGYSAPSSLVLQRARG-RACVRRRPGDLRLLAAGGESGGAGDIDSSVLYADMRRRLEELRRGGPEDSAPAAA---EDVSDLGLFQQEDWRDDGGLPGGGGSAGAAEAKMYSAQEMKQRYYEAFWRARNLHKEAKFRGTSDSIREDSSDTPTSPPATPPPEAQAVASRTTTLTPMAMNMFLS-GKAAADADPVTPSSASSDDVQGLTQMYXXXXXXXXXXXXXXXXSHAPASEAAAYAGGVGRTAGAPLSLGKKPEWQQXXXXXXXGASLPKRR-QAAFASSEGAGAGVSYRDSVTSM--SAEPQGLTQVFYLDPEEEAEAAAALPIVPRRSFLRERLGVPGEVVQGLRQVELDHARLAMIAVLVSGAVGAXXXXXXXVYMNAHDGLSALAEVARTPWLDPYVAGGILAAKALSEGDWRIGKGALAGCADRALSSLSNAGAKVLRVGSGNELRRLAVEIEVKHGRLALGAVVCAMVQQGILTTVAA 1710
            MPR+   S+TPP+  G A  VVG+LLG++G  VQA +P+     RG S+  +     ARG RA VR R GD+RL A GG SGGAGDIDSS LYADMRRRLEELR+     S    +   +DVSD GLFQQ++                  AK YSAQEMKQRYYEAFWRARNLH+EAKF  +S +  + SSDTP +PPATPPPEA+A  SRTT L+ MAMNMFLS G                 DVQGLTQMY                + A  +EA                                   LP R+ Q A  S+E   A         SM  +A+PQGLTQVF+LDPE+EA AAAALP+VP RSFLRERLGVPGE+VQ LRQVELDHARLAM+AVL+SG VGA XXXXX V +NAHDG SALA+VARTPWLDPYVAGGILAAKALSEGDWR+GKGA+AG ADRAL+++SN GAKVLR+GSGNELRRLAVE+EVKHGR+ALGAVVCAM QQG+LT+VAA
Sbjct:    1 MPRNRRPSTTPPSGAGPACLVVGLLLGRSGRAVQAFVPT---HHRGVSSLLTRPFAPARGGRALVRPRAGDMRLSATGG-SGGAGDIDSSELYADMRRRLEELRQSSSSRSDTGFSPIEDDVSDPGLFQQQNXXXXXXXX-------XXXAKAYSAQEMKQRYYEAFWRARNLHREAKFEASSGAEDDYSSDTP-APPATPPPEAEA-GSRTTILSHMAMNMFLSRGAXXXXXXXXXXXXXXXSDVQGLTQMYHLELEEEEGVLASTAVAAAATAEA-----------------------------------LPVRQPQHAAVSTEAVFAAPDVAAEAESMIPTAQPQGLTQVFFLDPEDEALAAAALPVVPERSFLRERLGVPGELVQDLRQVELDHARLAMLAVLLSGVVGAGXXXXXGVLLNAHDGFSALADVARTPWLDPYVAGGILAAKALSEGDWRVGKGAMAGLADRALNAVSNTGAKVLRLGSGNELRRLAVEVEVKHGRMALGAVVCAMAQQGLLTSVAA 481

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BLAST of mRNA_C-linearis_contig11.1216.1 vs. uniprot
Match: D8LGH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGH2_ECTSI)

HSP 1 Score: 408 bits (1049), Expect = 2.350e-129
Identity = 293/488 (60.04%), Postives = 334/488 (68.44%), Query Frame = 1

Query:  160 MPRS---SSTPPNTGRAGFVVGILLGKAGCPVQALMPSVASSFRGYSAPSSLVLQRARGRACVRRRPGDLRLLAAGGESGGAGDIDSSVLYADMRRRLEELRRGGPEDSAPAAA---EDVSDLGLFQQEDWRDDGGLPGGGGSAGAAEAKMYSAQEMKQRYYEAFWRARNLHKEAKFRGTSDSIREDSSDTPTSPPATPPPEAQAVASRTTTLTPMAMNMFLSGKAAADADPVTPSSASSDDVQGLTQMYXXXXXXXXXXXXXXXXSHAPASEAAAYAGGVGRTAGAPLSLGKKPEWQQXXXXXXXGASLPKRRQAAFASSEGAGAGVSYRDSVTSMSAEPQGLTQVFYLDPEEEAEAAAALPIVPRRSFLRERLGVPGEVVQGLRQVELDHARLAMIAVLVSGAVGAXXXXXXXVYMNAHDGLSALAEVARTPWLDPYVAGGILAAKALSEGDWRIGKGALAGCADRALSSLSNAGAKVLRVGSGNE 1605
            MPRS   ++TP   G A  V+G+LL ++G  VQA +P+     RG S+ +        GRA VR R GD+RL A GG SGGAGDIDSS LYADMRRRLEELR+     S    +   +DVSDLGLFQQ                    AK YSAQEMKQRYYEAFWRARNLHKEAKF G+S    + SSDTP +PPATPPPEA+A  SRTT L+ MAM+MFLS  AAA+AD        S DVQGLTQMY      XXXXXXXXXX                 TA  PL + ++P+          GA      +A FA+S+ A A  S   +     AEPQGLTQVF+LDP++EA AAAALP+VP RSFLRERLGVPGEVVQ LRQVELDHARLAM+AVL+SGAVGAXXXXXXXV + AHDG SALA+VARTPWLDPYVAGGILAAKALSEGDWRIGKGA+AG ADRALS++SN GAKVLR+GSGNE
Sbjct:    1 MPRSRWPNTTPSGAGPACLVLGLLLSRSGRSVQAFVPA---HHRGVSSLTPPSAPARGGRALVRPRAGDMRLSATGG-SGGAGDIDSSELYADMRRRLEELRQSSSSSSDTGLSPIEDDVSDLGLFQQXXXXXXXXXX-------XXXAKAYSAQEMKQRYYEAFWRARNLHKEAKFEGSSGIEDDYSSDTP-APPATPPPEAEA-GSRTTILSHMAMDMFLSRGAAAEADDXXXXXXXSSDVQGLTQMYYLELEEXXXXXXXXXXX-------------XXXTAAEPLPV-RQPQ------HAAVGA------EAVFAASDVAAAAESMIPT-----AEPQGLTQVFFLDPKDEALAAAALPVVPGRSFLRERLGVPGEVVQDLRQVELDHARLAMLAVLLSGAVGAXXXXXXXVLLKAHDGFSALADVARTPWLDPYVAGGILAAKALSEGDWRIGKGAMAGWADRALSAVSNTGAKVLRLGSGNE 444

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig11.1216.1 vs. uniprot

BLAST of mRNA_C-linearis_contig11.1216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5K6S9_9PHAE	7.190e-146	57.66	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LGH2_ECTSI	2.350e-129	60.04	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig11	contig	C-linearis_contig11:1069277..1078916 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Chlorophyll A-B binding protein
Ec32 ortholog	Ec-16_004020.1
Exons	7
Model size	2955
Cds size	1554
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927439.9726152-UTR-C-linearis_contig11:1069276..1069435	1622927439.9726152-UTR-C-linearis_contig11:1069276..1069435	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig11 1069277..1069435 +
1690879701.3212156-UTR-C-linearis_contig11:1069276..1069435	1690879701.3212156-UTR-C-linearis_contig11:1069276..1069435	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig11 1069277..1069435 +
1622927440.0544317-UTR-C-linearis_contig11:1077650..1078592	1622927440.0544317-UTR-C-linearis_contig11:1077650..1078592	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig11 1077651..1078592 +
1690879701.3911042-UTR-C-linearis_contig11:1077650..1078592	1690879701.3911042-UTR-C-linearis_contig11:1077650..1078592	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig11 1077651..1078592 +
1622927440.0654557-UTR-C-linearis_contig11:1078616..1078916	1622927440.0654557-UTR-C-linearis_contig11:1078616..1078916	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig11 1078617..1078916 +
1690879701.3992922-UTR-C-linearis_contig11:1078616..1078916	1690879701.3992922-UTR-C-linearis_contig11:1078616..1078916	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig11 1078617..1078916 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927439.9876978-CDS-C-linearis_contig11:1069435..1069723	1622927439.9876978-CDS-C-linearis_contig11:1069435..1069723	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig11 1069436..1069723 +
1690879701.3303764-CDS-C-linearis_contig11:1069435..1069723	1690879701.3303764-CDS-C-linearis_contig11:1069435..1069723	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig11 1069436..1069723 +
1622927439.999241-CDS-C-linearis_contig11:1074452..1074652	1622927439.999241-CDS-C-linearis_contig11:1074452..1074652	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig11 1074453..1074652 +
1690879701.3406954-CDS-C-linearis_contig11:1074452..1074652	1690879701.3406954-CDS-C-linearis_contig11:1074452..1074652	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig11 1074453..1074652 +
1622927440.0089524-CDS-C-linearis_contig11:1075087..1075742	1622927440.0089524-CDS-C-linearis_contig11:1075087..1075742	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig11 1075088..1075742 +
1690879701.3520737-CDS-C-linearis_contig11:1075087..1075742	1690879701.3520737-CDS-C-linearis_contig11:1075087..1075742	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig11 1075088..1075742 +
1622927440.019059-CDS-C-linearis_contig11:1076147..1076264	1622927440.019059-CDS-C-linearis_contig11:1076147..1076264	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig11 1076148..1076264 +
1690879701.364622-CDS-C-linearis_contig11:1076147..1076264	1690879701.364622-CDS-C-linearis_contig11:1076147..1076264	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig11 1076148..1076264 +
1622927440.0310786-CDS-C-linearis_contig11:1076829..1077015	1622927440.0310786-CDS-C-linearis_contig11:1076829..1077015	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig11 1076830..1077015 +
1690879701.372927-CDS-C-linearis_contig11:1076829..1077015	1690879701.372927-CDS-C-linearis_contig11:1076829..1077015	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig11 1076830..1077015 +
1622927440.044333-CDS-C-linearis_contig11:1077542..1077650	1622927440.044333-CDS-C-linearis_contig11:1077542..1077650	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig11 1077543..1077650 +
1690879701.38156-CDS-C-linearis_contig11:1077542..1077650	1690879701.38156-CDS-C-linearis_contig11:1077542..1077650	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig11 1077543..1077650 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig11.1216.1	prot_C-linearis_contig11.1216.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig11 1069436..1077650 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig11:1069277..1078916+
coding sequence from alignment at C-linearis_contig11:1069277..1078916+

protein sequence of mRNA_C-linearis_contig11.1216.1

>prot_C-linearis_contig11.1216.1 ID=prot_C-linearis_contig11.1216.1|Name=mRNA_C-linearis_contig11.1216.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=518bp
MPRSSSTPPNTGRAGFVVGILLGKAGCPVQALMPSVASSFRGYSAPSSLV
LQRARGRACVRRRPGDLRLLAAGGESGGAGDIDSSVLYADMRRRLEELRR
GGPEDSAPAAAEDVSDLGLFQQEDWRDDGGLPGGGGSAGAAEAKMYSAQE
MKQRYYEAFWRARNLHKEAKFRGTSDSIREDSSDTPTSPPATPPPEAQAV
ASRTTTLTPMAMNMFLSGKAAADADPVTPSSASSDDVQGLTQMYYLVEEE
EAAATTAVVSSHAPASEAAAYAGGVGRTAGAPLSLGKKPEWQQQQQQQQT
GASLPKRRQAAFASSEGAGAGVSYRDSVTSMSAEPQGLTQVFYLDPEEEA
EAAAALPIVPRRSFLRERLGVPGEVVQGLRQVELDHARLAMIAVLVSGAV
GAGAGAGAGVYMNAHDGLSALAEVARTPWLDPYVAGGILAAKALSEGDWR
IGKGALAGCADRALSSLSNAGAKVLRVGSGNELRRLAVEIEVKHGRLALG
AVVCAMVQQGILTTVAA*

mRNA from alignment at C-linearis_contig11:1069277..1078916+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig11.1216.1 ID=mRNA_C-linearis_contig11.1216.1|Name=mRNA_C-linearis_contig11.1216.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9640bp|location=Sequence derived from alignment at C-linearis_contig11:1069277..1078916+ (Chordaria linearis ClinC8C monoicous)
CACAGCTCACGCCAGAAAATAATCCTCTTTGCCAAGCCAGCGATCGAAAC
AAAACGCCCCCTCGAAGCACTCTAGGCGACGTCACTCATCCTTCCTGCGT
CTTTTATTTGCAAGGTGCTCGAGAGTTTGGATAGGGGTCGAGATTTTGGG
AACGGCGTCATGCCACGCAGCAGCAGCACACCCCCGAACACGGGAAGGGC
AGGCTTTGTCGTGGGTATTTTGCTGGGCAAGGCCGGGTGCCCCGTCCAAG
CCCTCATGCCTAGCGTCGCGTCGTCTTTTCGAGGGTACTCGGCGCCGTCG
TCCTTGGTGCTTCAGCGGGCGAGAGGTCGCGCCTGCGTAAGACGGCGACC
GGGCGACCTGCGTCTTTTGGCGGCCGGCGGGGAGAGCGGCGGGGCGGGAG
ACATCGACTCGTCCGTGCTATACGCAGACATGCGTCGGAGGCTAGAGGTA
TGGGTCAGGCAGCGTGCGGGGGCGGGGGCGGGGGGAGGGGGGCTGGCGTG
ATGATGGACGCGTAGCTGTGCTACTGCTGTAGACTCAGAATTATCCTTGC
GAGGGTGCCGATTTTTCGAACAGCCTGCGTCTGCGCTGCCTTCAAGTACG
GCTGCCCCGCTTCCTTTGCTTTTTCGAGTTTCCAGTGCGAACAAGATGTC
TACTGCTGTCTGCTGTATTCTGTGCGGCGCTTTGACCGCACTCTCTTGGT
TTGGTCTGTGCTCTGGGTTACGGATGGCCTTCATGCCTGATGTCCGCCAC
AAGCCTAGCCGATCCATGAGCACTTACACACTGCTGGTGAAGTTTAGAAG
CGGCTCTTTTTGAAAGCTTTGAAGTCCTTATACTAGGGCTGTGTATCGCT
AGCATTTTTCGATATAATACAATATATATCGTGAATCGGCGCAGCCGATA
TTACGATATTTTCACGATACTTGTATATTGGCGCCAATATATCGTGAAAA
TATCGGCCCGCTTGCTGCGAGCGCAGCGAGCCCCCCCTCGGCCCCCCCCG
GCTGAGGGGGCCCCGCCGGAGGGTGTATTTTTACGCGATTTGGCTTCAGC
AGGCCGGATCTTATGGCAGACGGAATCGAAATTTTGGTGCTGTGGCGAGC
CCCAAAAAAGAGGGGGGGGGTCGAATGCGGTGTGGGCACATCGTGCCACG
CGGAATTGTGTTTCTGCCTCAACCACAACACAGCGACACTGATACCTCCG
GCCATAGCTGACGGATTGCCACCAAACCTTGTACCTAGGTAGGCTGTACG
CTCCATACGTGTGGTATTCTTGGAAGCCCTTCATCATTCCCACGCGACTT
TTTTGTGGCGAGGGCCAGTTGATCGCGTGGCCAAAAAAACATTTCGTCTG
ACTTTTCTTGCCGCGGAATATAGGCCTATATTTCGCTTTTTTTCGGCCGC
GGAATTCCCAAACGAACAGGAAATATGCACACGCGATCAACTGGCCCTCG
CCACAAAAAAATCGCATGGGAATGATGAAGAGCTTCCGAGAATCCCACAC
GTGTGGAGCGTACAGCCTGCAAGGTTTGGTGGCAATCCGTTGCCTGTGGG
CTGAGCAACTAGTGTCGCTGTGGTTTGGTTGGTGATCCCCAACATTCCGT
TTGCCTCTCGCAGCCCCCTACCCCCCCTCAAAAGGGGGAGCCACGGACAA
GAGCAAAAATTGCGATTCGCGGCAAAATTCCGCTCCCATAAGATCCGGCC
TCACAAGAAGATATTTTTGGTGTGATTTTGGGCCACTTCGATGATGCCAC
TTTTGTGTGCGACATACGGCAAAATTGAAAATTATACCAAAAATGAGAGA
AAAATGAACGATGGATAACATTGTTTTTCAAAGCTCTGGTTGGGTGGCAC
AACAACACCACGTTTCAACAAAGAGTCAGTAGGAAGCTGCTTCCAAAACA
CGCCCCCCACCCCCCCTCCCTTCTCAATCTCTTCATGAAACACCAATACC
GAAAAACAACAGCCCAAAACCAAAACCCAAAACCCAGCGCTCAGCCCACC
ACGTGGTGGGGAACCGTTGCACATGACCTGCTCCACACAAAATGCGCCTG
CTCCACACAAAATGCGAAACCGAACAATCAAGGAGAAACGAACACCAGAC
GCGCTGGTCAGACCAACGAAACAGCTAAACAGCAGTCTTCTTTTGGCGAA
CAGCACTCTTCTTCCATTGATCCACCACGCCCCACACGTTGCGCAAGTAC
ACGAGGAGCTCGACGTTTTCGTCTAAAAGGCAACTCCGGTTAGGCGTCAC
GGTTAGCCCTGCCGTGGAAAACATGCGCTCGGATTGCGCTTGAGATGACG
GAATGGCAAGCACATGACGGAATGGCAAGAGGCCAGCGCCGCCAAAAGAG
GGCATTCCAACTGCCTCTTGCGCCACCAGTCGAGGGGATTGTTGAAGGTC
TTCTTCTCTACCGTCTCCCCTGCCTTCTTGGTTTTCTTCATGTCCCAAAC
CCGTATCCCAGCTGCGGCCTTGAAGGCCGAGACCTCCATGTCCGCGGTGG
CCTCCAGTTGCTCGCGTCTCTCATCCGCAGAATCGCCAACACTGCAACCC
CCTGCATCCTCAGCGTGGGCAGCAGCGGCGGCCTCGAACGGGCTCATGCG
AGGGGGCTTCGGGACTCCCTGCTGGCCTCCTGGTGAGCCCGGCTGCGTCT
GAATGGGCGTCTGGATGGGCTCGGGAGCAGGTGTCTCCGCGGAGGCGGGT
GCCTTGTCGCTGGCGTGCTTCTGCAAAGCAATGTCCACCGCGGCGCTAGC
GACAGCGCGCCACACGTCTGCGTGCTCCCGAGTCAGGATCCCGTAGAGGT
GCTTGGCCCTCGGGTCGACGGCCGTTGCACCTGCTTCAGCTTAAAACCCT
GGGATTGGCGCCTCTTGCCCTCCTTGTACTCGAGGATGTTGGAGCCGTCG
CCCCAGCGGTTGGTGAAATCTGCCAACAGCCTTTCGACGTCCGGACGAAC
GGCCTCCATCGCCTTCTGGGTAGTCTCTTTGAGCCCCTGTTGCGCAATGT
TCCTCAGGTCCTTGGCTGCGGCCTCAAGCCCGTACCGCAACTCCGCAACC
TTCGCGATGGTCATGCTACCCGTCACGTACTGAGCCCCCTCCAGGTCCTT
CTGCGCCTTCATGAACGGCTCCAGGATTGGTTCGATCAGCCGCAGCACCT
CCCAGTGCGTGTCGGACAACAGCGGGTGGATGTCGTCCATCGACTCATGA
AGCTTGGTCGCCTTCATGAGGTAGAGCAGACGCACGATCATCGCCCATGT
CGACCACCACCTCGTCTCCACGTCTTGCATCACGGCCAGCGCTTCTATCT
GGAGGATGCCGCACAGCTCGGCGAGGTGAGCTGCCATCTGACTCGACTTC
TTGTAGCGAGCGCCCCACAAGCGTTCGCTCAAGGCTCAAAGCGTCAAGAC
TCCTCCCGTTGAAGACCGATGAGGTCGTCGACTCCATGCGGTGGTTGGAG
CAGCCGACGTGTGAAATCATATCCCCGCCCACCTCCAGCAGGCGACCCGC
CTTGACCATAGACGGCTCGCAATCGATGACGCATGCAGTCACCCGACCGG
TTAGGTCGTGGCGTTCGATCATCCCCGCTATTTCGTTCGCCAAGTCCTCC
CCCGTGGTGGTCCGCGTGTGTTTCGCGCAGTCCAGAGAAATATGGTGCAG
GTTCCACTCGGAGTCGATGTAGGCCACGGTCAGCGACGAGTACGACTCGT
TGCTTCGAGATGTCCAGCCGTCCGTGGTGATCGCTACGAACTCGTCGTCC
AGCATGAGGGCGACCTCGCTTTCGAGCCCCTTTTCGACAGCGCGCATCCT
TGAAAGAAGCTCGCGGCGGTCGGGAACCGTGGCTTTTTTGTTGAGACTCG
AGACGACAACCTTGAATTCAGGGTACTCGACGAACTGTTGCATAGTCAAA
GAAGTCCGAACGGCCGAACGGGGAGGGTGGGGCAACAGTCAGCTGTGCTG
CATATTGTTTCGAAAGGGTTAGCCTGCGAGAGTTTGAAGCGACGGCAGTC
GGTGTACAGGTGTAATTTCGTGCCACCATGTAAAATAATACGTCACTGAT
TGTGCACAACGGCTGCCTCTTGTTCTTTTTAGGCTATGACCTTGGCGCCC
TCTGCTCGCAAGTGCGGGCGCACCACACACGCTGAAATACTTGCACATGG
TGTGTGCAACACGCGCCAGCTTGGAAAAACACTGCTGTATCGCTGAAATA
CTTACACATGGTGTGTGCAACACGCGCCAGCTTGGAAAAACACCTGCTTC
GAGAGGAAGCTCCCGATCTTTTTTTGTCCTGTTGCTGCTGCTGCTGCTGC
TGCTGCTGCGGGGCCGGAGCGCTTCCCGCGCTTGGTGTTCTCGATCGCTG
TGTGTGCCTCTCTGTGTCCAGGATAGGAGGTGTCGAGATGAGACACGAGG
TTGGTAGGCGATCCTCCCGTGAACTTGCGCTCCGCAGTTCTGAAAGTTGC
CGCTCCCAACGCACAGCTGACAGATCGCGAGGCCAGCAAACCTTGGGTTC
TGATACACCTTGTAATGCTTCCACACCATGTGCGAGGCGCCCGCGGGCTT
GGACAGCTTCGGCGCTGTCTTCACCCTGTCCACCTTCTCGGTTTCTTTAT
CACGCACTACTGGTGCTGCTGTCTCTAGGACTGGTTCAACTGCAGCCCCC
GACGTGGTGGACACTCCATCCTGGTCCGCTTCTGGTTGTGAGGCACTCAT
GGGTGCTTAACAAGTGTGCTGTAGTGCTGTTGCTGTGCTGTTGCTGTGTG
CGTGCGCCCGTGTTCATCGGGGACTCCGTGTGCAATGTGTGGTACACGGG
GGCCCATTTTCGATTCACGGAGCCCCCCAAAATATCGGCCCGCGTGTCGG
TGCCACGATACTATATCCGATACTATATATATCGTCCGATTATATCACAC
ATATCGTTTCCGATACACAGCCCTAGCTTATACTCTGTTTCATGTCCCGG
GTTTCAAGACAAAACACAGCGAGAGCCAAGCTTTCACCCGTTCGAAAAGT
TAACGTTCACGCTCTGATTGGGGTCATTCGCTTAGCACTTAGACATAGAG
GCATCACCGCCCGACTTCCCTATGGTGTGCTTGAAATCCTAGCTTCCCTT
CTACATCCCTACATTTATTGGCTCTCCTTCCTAAACATAAACACCAGACT
GAAGCCGACCGTTTGTCTCAACACAGGAGCTTCGACGCGGCGGCCCGGAG
GACAGCGCGCCTGCAGCAGCGGAGGACGTGAGCGATCTGGGGCTCTTTCA
GCAAGAAGACTGGCGGGATGACGGGGGCCTTCCCGGGGGAGGGGGGAGTG
CCGGTGCCGCGGAGGCGAAGATGTACTCGGCCCAGGAGATGAAGCAGCGG
TACTACGAGGCCTTCTGGAGAGCAAGGTACGCATATTACATGTCCCACCA
CCAAGTCGAACTAACTTAGGTTCTCGGGTTATCCAAGCCGGTGGGTGTGG
CACCAAGAGAATATAAGTCGTCTGGCTCGTGGTGGTGGGGAATAGGGCTC
AAATCAGGACTAAGAATTGACACGAGTTTAAATTGTTTGGGTCACCAAGC
TGCCCGCCCATCTGCTGGTCTGTTCCGCACCGCCTTGATGTACATACACG
CACTGCTGGTGTACAGGGCGGGGCGTTCAGGGTACGAACAGCAGTGCCCA
CCTCCTTCCCTCTGCGACGCAGATACTCCACAGATACTTCTCTCATTTTC
ACCAACCACCAAGCGTTTCTTGTCCGCCTCAAAACACGCACTTAAAAGTG
TCTTCTCCTGCGAATATGCTGGCCCGCGCCCACGTCTCCCCTCTTGCCCG
CCCTTGTCAAGAAACCTCCACAAGGAGGCCAAGTTCAGAGGAACCAGCGA
CAGCATCCGAGAGGATTCCTCGGACACCCCTACTTCTCCTCCCGCCACTC
CGCCTCCGGAAGCCCAGGCGGTGGCCTCGCGCACCACGACTCTCACCCCC
ATGGCGATGAACATGTTCCTCTCGGGTAAGGCCGCCGCAGACGCCGACCC
CGTGACTCCCTCCTCCGCCTCCTCCGACGACGTCCAGGGGCTGACGCAGA
TGTACTACCTCGTGGAAGAGGAGGAAGCCGCCGCTACCACCGCCGTTGTC
TCTTCTCATGCTCCCGCATCGGAAGCCGCAGCTTACGCCGGCGGGGTCGG
CCGAACGGCAGGGGCGCCGCTCTCGCTGGGAAAGAAGCCGGAGTGGCAGC
AGCAGCAGCAGCAGCAGCAGACGGGCGCATCGCTGCCGAAGCGCCGACAA
GCCGCCTTTGCGTCCAGCGAAGGTGCTGGTGCCGGAGTTTCCTATAGGGA
CTCCGTGACGTCGATGTCGGCCGAGCCGCAGGGCCTAACGCAGGTTTTCT
ACCTGGACCCCGAGGAGGAGGCGGAGGCGGCGGCCGCACTGCCGATCGTG
CCGCGGCGCTCGTTCCTGAGGGAGCGGCTCGGAGTTCCGGGAGAGGTGGT
GCAAGGCTTGCGTCAGGTGCAGAGGGGATGCGTGGTTGCAATTTTGTAGG
GGGGGGGGAAGTCGGGACAGTAGTCGCACCAACGAGGAGTGTTGTTGGAG
TCGTAAACCCACGACTGCTATGGTTATGCGGTTACCGTTTGCATCTGACG
CCGCGGGTGCATCGTTCTGCGAAAGTGCATGTGTGGTACATACACCCATG
TACCCGGACGGTCTGGTTCTTACTCACGCTTGTGACTTTATGACGGCGTA
GTCGTAGTCTTCACCCCGTTCCGTGTCGCTTCATTTTCGATATCTGCCAG
ACGAGGGCCCTTTCTCTTTCGCTCGGTGTGTCTCAAGCCCAGCATTTCAC
CTTCTCCCAGTCTACCGCAGCACTTTCTCACCAAGACCACGTCTCCGCCC
GCTCTGCCCCGTTTTCCCCAGGTGGAGCTGGACCACGCGCGTCTGGCCAT
GATCGCCGTCCTCGTGAGCGGCGCCGTCGGCGCGGGGGCCGGGGCCGGTG
CCGGCGTGTACATGAACGCCCACGACGGATTATCAGCGGTGAGTTCAGTT
ACAGCAGTACTGCTGTAGAGTTTCGTTTTTTTGTGGGAGATTTGCATGCG
CTTGCGGTTAGGGTTAGGGTGATATACCTTAGGGCGAGGGCTGGGGGGGT
TAATTGTTGCCATTTCTAGACGGGGTTGGCGCAGTCTTGTGGTCCAACTG
TATAGCTTGGCGTCGTGACGAACGTTAACGTATTCTGTTCCACCAAGTAT
GATAGCATGTACTCCGGAGTATTTCTTTTCGTGGGGTGCCTTCGAAACGT
TCAGTGGTAACTACTGTAGTAGCGATATCTGATTCGCCTCTCTCTTATTT
CCTCTCTTTTAGTCCTCTCTCTTTTAACGGTTGCGATATCTGATTTTGAT
TCTCCTCTCGAATGTATGATATCTCCTCTTTATGTCTACTCTTTTTTTTC
TACTCCGACGATCTCTCGCGCCTGCCTACCCGTGTGCCCCAACATCTCAG
CCCTCACTCGTCGATTATCTCCCCTCTTGGTTTGATATTTGTCTTGCGAT
GCCATATTTTTCCTCGGAACTGCTGTTTTTTTTTTCGTTCTTTTAAATAC
CAGCTGGCAGAAGTGGCGCGGACCCCGTGGCTGGACCCTTACGTCGCGGG
CGGAATCCTCGCCGCCAAGGCCCTCTCGGAGGGAGACTGGCGGATCGGCA
AGGGAGCGCTGGCGGGCTGCGCGGACCGAGCCCTCAGCTCGCTGTCCAAC
GCGGGGGCCAAGGTTCTCCGCGTTGGGTCTGGTAACGAGGTGCGTCGAAG
TACATCAACCGCCCGCCCTCCGGATGGTGCGAAGCGGCAAAACAACAAAG
AGGTTTCGTGCAGCAAGAGTTGGTGTTGGCCAGGCCTCTAGTTGTGTGTG
TTTGTGTGTGTGTGTGTGTTTTTCGATGGTGAACCAACGACACAACCTAA
GCGGCAAAACTAAAAGTTGAAGGAAAACTAGAGGCTTGTGCGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTTTTGTCAGCCTTACTATTCCGCCATCACA
TAATTTGTGTACCTCCCGCCGCCTCGGAGCACGACAGCAACCATGTCTCC
CAGCGTATTTTGTAGTAATGGGTCTACCGTGGCTCTGGATGACAACGATT
GGTGACTCGCGAACCTGCCTAGATGCAAAGCCTAAATGCGAAGCCGATAT
GCAACGGAAGCTAACCTCTCCTTCTCCCCCACCCCCACCGTTTTTGCGCT
TGCGTTGTCGTTTGTCGTGGTATTATATATACTGCTGTACTCCGCATATA
TTTTTTGGGGAAGCAGCTTCGCCGGCTGGCCGTGGAGATCGAGGTGAAGC
ACGGCCGCCTGGCCCTCGGCGCCGTCGTTTGCGCCATGGTGCAGCAGGGA
ATCCTCACCACCGTGGCGGCGTAATTAAACAGTTTACTCCGGAACTGTCT
TTTTTCTCGAGGAGGAAGCGCGAAGCGAAAGAGCGCGCAACGATCCTTGT
ACATACCAGTACACGTTTTTGTCTATTTGACCGTTTTTTTCCCACCCAAA
ATGCCCCCATGGCGCGCGGTGTAGAGAACGCACGTGTTAACTTTCCCCCG
GTTTGAGTCTACTAAAGGGAAGGTTCTTCTAGATGGTGCAGATGACATGT
AGAATAAAAGGTGGCGTTTAGTATCTGTTTTTTTTGCGGGACTGCTTGGC
CTGGTTTTTGAGAGATTTTGCGCGTCGGAGTGGTTTTCCCTTGGGGAGAG
GGTTTTCGCGATAGAGATGGTGTGGTGTCGCGAGAGAGAGCGAATTGCAT
GTACCCCCCCCTCTGCTTGTATTGCTTGTTTCTTCGCTGTTTTTGTGGAA
TTTGTTTGGGGGGGTGTCGGCCGATGCAAGAGTAAATGGCCATGAAGCCA
AAAAGCTGCCGTGATGGGAAGGAAGTCTAGAACCCTCGGAGCTCCTTGTA
TGATACTCCTTATGTTCCCTCTTTTGTCATAAGTCGGCTGCTGGGGGCTC
GATGGCGGATTTGCTGGTGGGGAGGGGGGTCTCTCTCGGTGTCGGGTTCT
TGTGTAGATGAGCCAGACTTGGATAGCGGAGCGCGTCAGAGCAACTTTTA
ATTTTTCTCTCTCTCGTCATTCCCTTCCATCTCTTCCGTCTTACGGAAAA
TATCCGCGCCGCTTAGGAAACCCGGCACGGTGGAGTACGTGCGTACTTGC
TGCCACATTCGCACCTCCGAAGGCGGCGTGCTTTGCTGCCGACCTTGACA
CAGACCGTCCATGGTCAATGATGAAAGTTGAGCTTTTTTCACCGAGTGTT
ATCGAGGCTGAGGTTTCGACTCCCCCCCTCCGGTTTTTCAACTCTCGCCT
CCTTCTTGAGCTCTGGGCTCTCTGTCGTTGCGGGGCAGAGTGAGAAAACG
TGTGCGCAGGGGATTTCGGCGCGTGACTTGAGTTAGGATTTCTTTCTTTC
ATGTCTTTCTCACATCTACTTTTGGAGAATTTCACCTCAGTATAATTTTG
GTGAATATCTTGTTTCTTTTCATCCGCAAAACTGCTGTGGATTACAATCT
TCTCGTTATGGAGCTGTTTCGTTCACCACACTGGTTCCTGGTAATGAATG
CCGTGAGCGGTTAAGATAGATAGTCTGCTGTCCGGTTTGTTGTTGTTGTT
GTTGTTGTCTTCACGTTAAAAACCATCCCGTCTCTCATCA

Coding sequence (CDS) from alignment at C-linearis_contig11:1069277..1078916+

>mRNA_C-linearis_contig11.1216.1 ID=mRNA_C-linearis_contig11.1216.1|Name=mRNA_C-linearis_contig11.1216.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3108bp|location=Sequence derived from alignment at C-linearis_contig11:1069277..1078916+ (Chordaria linearis ClinC8C monoicous)
ATGCCACGCAGCAGCAGCACACCCCCGAACACGGGAAGGGCAGGCTTTGT
CGTGGGTATTTTGCTGGGCAAGGCCGGGTGCCCCGTCCAAGCCCTCATGC
CTAGCGTCGCGTCGTCTTTTCGAGGGTACTCGGCGCCGTCGTCCTTGGTG
CTTCAGCGGGCGAGAGGTCGCGCCTGCGTAAGACGGCGACCGGGCGACCT
GCGTCTTTTGGCGGCCGGCGGGGAGAGCGGCGGGGCGGGAGACATCGACT
CGTCCGTGCTATACGCAGACATGCGTCGGAGGCTAGAGATGCCACGCAGC
AGCAGCACACCCCCGAACACGGGAAGGGCAGGCTTTGTCGTGGGTATTTT
GCTGGGCAAGGCCGGGTGCCCCGTCCAAGCCCTCATGCCTAGCGTCGCGT
CGTCTTTTCGAGGGTACTCGGCGCCGTCGTCCTTGGTGCTTCAGCGGGCG
AGAGGTCGCGCCTGCGTAAGACGGCGACCGGGCGACCTGCGTCTTTTGGC
GGCCGGCGGGGAGAGCGGCGGGGCGGGAGACATCGACTCGTCCGTGCTAT
ACGCAGACATGCGTCGGAGGCTAGAGGAGCTTCGACGCGGCGGCCCGGAG
GACAGCGCGCCTGCAGCAGCGGAGGACGTGAGCGATCTGGGGCTCTTTCA
GCAAGAAGACTGGCGGGATGACGGGGGCCTTCCCGGGGGAGGGGGGAGTG
CCGGTGCCGCGGAGGCGAAGATGTACTCGGCCCAGGAGATGAAGCAGCGG
TACTACGAGGCCTTCTGGAGAGCAAGGAGCTTCGACGCGGCGGCCCGGAG
GACAGCGCGCCTGCAGCAGCGGAGGACGTGAGCGATCTGGGGCTCTTTCA
GCAAGAAGACTGGCGGGATGACGGGGGCCTTCCCGGGGGAGGGGGGAGTG
CCGGTGCCGCGGAGGCGAAGATGTACTCGGCCCAGGAGATGAAGCAGCGG
TACTACGAGGCCTTCTGGAGAGCAAGAAACCTCCACAAGGAGGCCAAGTT
CAGAGGAACCAGCGACAGCATCCGAGAGGATTCCTCGGACACCCCTACTT
CTCCTCCCGCCACTCCGCCTCCGGAAGCCCAGGCGGTGGCCTCGCGCACC
ACGACTCTCACCCCCATGGCGATGAACATGTTCCTCTCGGGTAAGGCCGC
CGCAGACGCCGACCCCGTGACTCCCTCCTCCGCCTCCTCCGACGACGTCC
AGGGGCTGACGCAGATGTACTACCTCGTGGAAGAGGAGGAAGCCGCCGCT
ACCACCGCCGTTGTCTCTTCTCATGCTCCCGCATCGGAAGCCGCAGCTTA
CGCCGGCGGGGTCGGCCGAACGGCAGGGGCGCCGCTCTCGCTGGGAAAGA
AGCCGGAGTGGCAGCAGCAGCAGCAGCAGCAGCAGACGGGCGCATCGCTG
CCGAAGCGCCGACAAGCCGCCTTTGCGTCCAGCGAAGGTGCTGGTGCCGG
AGTTTCCTATAGGGACTCCGTGACGTCGATGTCGGCCGAGCCGCAGGGCC
TAACGCAGGTTTTCTACCTGGACCCCGAGGAGGAGGCGGAGGCGGCGGCC
GCACTGCCGATCGTGCCGCGGCGCTCGTTCCTGAGGGAGCGGCTCGGAGT
TCCGGGAGAGGTGGTGCAAGGCTTGCGTCAGAAACCTCCACAAGGAGGCC
AAGTTCAGAGGAACCAGCGACAGCATCCGAGAGGATTCCTCGGACACCCC
TACTTCTCCTCCCGCCACTCCGCCTCCGGAAGCCCAGGCGGTGGCCTCGC
GCACCACGACTCTCACCCCCATGGCGATGAACATGTTCCTCTCGGGTAAG
GCCGCCGCAGACGCCGACCCCGTGACTCCCTCCTCCGCCTCCTCCGACGA
CGTCCAGGGGCTGACGCAGATGTACTACCTCGTGGAAGAGGAGGAAGCCG
CCGCTACCACCGCCGTTGTCTCTTCTCATGCTCCCGCATCGGAAGCCGCA
GCTTACGCCGGCGGGGTCGGCCGAACGGCAGGGGCGCCGCTCTCGCTGGG
AAAGAAGCCGGAGTGGCAGCAGCAGCAGCAGCAGCAGCAGACGGGCGCAT
CGCTGCCGAAGCGCCGACAAGCCGCCTTTGCGTCCAGCGAAGGTGCTGGT
GCCGGAGTTTCCTATAGGGACTCCGTGACGTCGATGTCGGCCGAGCCGCA
GGGCCTAACGCAGGTTTTCTACCTGGACCCCGAGGAGGAGGCGGAGGCGG
CGGCCGCACTGCCGATCGTGCCGCGGCGCTCGTTCCTGAGGGAGCGGCTC
GGAGTTCCGGGAGAGGTGGTGCAAGGCTTGCGTCAGGTGGAGCTGGACCA
CGCGCGTCTGGCCATGATCGCCGTCCTCGTGAGCGGCGCCGTCGGCGCGG
GGGCCGGGGCCGGTGCCGGCGTGTACATGAACGCCCACGACGGATTATCA
GCGGTGGAGCTGGACCACGCGCGTCTGGCCATGATCGCCGTCCTCGTGAG
CGGCGCCGTCGGCGCGGGGGCCGGGGCCGGTGCCGGCGTGTACATGAACG
CCCACGACGGATTATCAGCGCTGGCAGAAGTGGCGCGGACCCCGTGGCTG
GACCCTTACGTCGCGGGCGGAATCCTCGCCGCCAAGGCCCTCTCGGAGGG
AGACTGGCGGATCGGCAAGGGAGCGCTGGCGGGCTGCGCGGACCGAGCCC
TCAGCTCGCTGTCCAACGCGGGGGCCAAGGTTCTCCGCGTTGGGTCTGGT
AACGAGCTGGCAGAAGTGGCGCGGACCCCGTGGCTGGACCCTTACGTCGC
GGGCGGAATCCTCGCCGCCAAGGCCCTCTCGGAGGGAGACTGGCGGATCG
GCAAGGGAGCGCTGGCGGGCTGCGCGGACCGAGCCCTCAGCTCGCTGTCC
AACGCGGGGGCCAAGGTTCTCCGCGTTGGGTCTGGTAACGAGCTTCGCCG
GCTGGCCGTGGAGATCGAGGTGAAGCACGGCCGCCTGGCCCTCGGCGCCG
TCGTTTGCGCCATGGTGCAGCAGGGAATCCTCACCACCGTGGCGGCGTAA
CTTCGCCGGCTGGCCGTGGAGATCGAGGTGAAGCACGGCCGCCTGGCCCT
CGGCGCCGTCGTTTGCGCCATGGTGCAGCAGGGAATCCTCACCACCGTGG
CGGCGTAA